RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INHBA (Homo sapiens)

Ensembl gene IDs: ENSG00000122641

Ensembl transcript IDs: ENST00000242208.5, ENST00000416150.1, ENST00000442711.1, ENST00000464515.1, ENST00000638023.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGCAGTaGGTATTGTATTTTCTGCATAAGAAAGGGCTGCCTCTAGAACAC +
Preference number: 1 (lower is better)
Translates to: VDRPGLESTLKLLMQ*VLYFLHKKGLPLEH
Trigger: GTGTTCTAGAGGCAGCCCTTTCTTATGCAGAAAATACAATACGCACTGCATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 90 bp TTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACACTGTTTCTaGAGGTTCCGGTACCAAAGAAGATGCAGTTCAAAATACTGCCAG +
Preference number: 1 (lower is better)
Translates to: LLLRSEPGLNFSHCF*RFRYQRRCSSKYCQ
Trigger: CTGGCAGTATTTTGAACTGCATCTTCTTTGGTACCGGAACCTGCAGAAACAGTGTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR TCA 90 bp TTCTCAGGTCTTTTAAGCCTGAACACAATCCACACTACTCAACCTTaGATCCCAACCCCTGACTCATTGATGGTGAATGATACCAACCAC +
Preference number: 1 (lower is better)
Translates to: FSGLLSLNTIHTTQP*IPTPDSLMVNDTNH
Trigger: GTGGTTGGTATCATTCACCATCAATGAGTCAGGGGTTGGGATTCAAGGTTGAGTAGTGTGGATTGTGTTCAGGCTTAAAAGACCTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 90 bp TCATGGCTTTCTAGATGCTATTTGGGTTGTTCTAGTCCACACTACTaGAGACTAGATTGGTTGATTCAAGGCTCACAAGGGAACCTCAAG +
Preference number: 1 (lower is better)
Translates to: SWLSRCYLGCSSPHY*RLDWLIQGSQGNLK
Trigger: CTTGAGGTTCCCTTGTGAGCCTTGAATCAACCAATCTAGTCTGCAGTAGTGTGGACTAGAACAACCCAAATAGCATCTAGAAAGCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 90 bp TTGGTAAATTTCTGCTTTTTCCATGGCCTTGACCATCTTTGCTACTaGGCAGTGAACCAGGACTTAATTTCTCACACTGTTTCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: LVNFCFFHGLDHLCY*AVNQDLISHTVSAG
Trigger: ACCTGCAGAAACAGTGTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAGCAGAAATTTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR TCA 90 bp ATGGGTATCAGCTTTCTTGGTAAATTTCTGCTTTTTCCATGGCCTTaGCCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCA +
Preference number: 1 (lower is better)
Translates to: MGISFLGKFLLFPWP*PSLLLRSEPGLNFS
Trigger: TGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAGCAGAAATTTACCAAGAAAGCTGATACCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 90 bp GCTTTCTTGGTAAATTTCTGCTTTTTCCATGGCCTTGACCATCTTTaGTACTGCGCAGTGAACCAGGACTTAATTTCTCACACTGTTTCT +
Preference number: 1 (lower is better)
Translates to: AFLVNFCFFHGLDHL*YCAVNQDLISHTVS
Trigger: AGAAACAGTGTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAGCAGAAATTTACCAAGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTCTCTGGACAACTCTTaGTCCCTTTCCCCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LPTCMISKVDRPGLESTLSLDNS*SLSPWA
Trigger: AGCCCAGGGGGAAAGGGAGCAAGAGTTGTCCAGAGA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCACACTACTCAACCTTaGATCCCAACCCCTGACTCA +
Preference number: 2 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHHTTQP*IPTPDS
Trigger: TGAGTCAGGGGTTGGGATTCAAGGTTGAGTAGTGTG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTACTGCCCTCACCTCTaGCTCCTCTTAACTGTTCTC +
Preference number: 2 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHYCPHL*LLLTVL
Trigger: GAGAACAGTTAAGAGGAGGCAGAGGTGAGGGCAGTA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCCAGAAAAAGGAAGTGTaGCCACCTGCACACGATTGT +
Preference number: 2 (lower is better)
Translates to: LPTCMISKVDRPGLESTLQKKEV*PPAHDC
Trigger: ACAATCGTGTGCAGGTGGTCACACTTCCTTTTTCTG...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGGTAGGAAAGTGCCTGTaGTGGGCCCTTTCAAACTCA +
Preference number: 2 (lower is better)
Translates to: MISKVDRPGLESTLKLLMVGKCL*WALSNS
Trigger: TGAGTTTGAAAGGGCCCATCACAGGCACTTTCCTAC...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTTGATCCCTGTACAATaGAAGAGGGCCTTGCTGAAT +
Preference number: 2 (lower is better)
Translates to: LPTCMISKVDRPGLESTLLIPVQ*KRALLN
Trigger: ATTCAGCAAGGCCCTCTTTCATTGTACAGGGATCAA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTCCTGTCTCTTTCACTaGTTCATCTCTGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: MISKVDRPGLESTLKLLMSCLFH*FISEPW
Trigger: CCAGGGCTCAGAGATGAAGCAGTGAAAGAGACAGGA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCCCCGTTTAAACAACTaGTGTCATCAGTGTGATTTC +
Preference number: 2 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHPRLNN*CHQCDF
Trigger: GAAATCACACTGATGACATCAGTTGTTTAAACGGGG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTGCCACTGTCTTCTCTaGACAACTCTTGCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: MISKVDRPGLESTLKLLMCHCLL*TTLAPF
Trigger: AAAGGGAGCAAGAGTTGTCCAGAGAAGACAGTGGCA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTCACTGCTTCATCTCTaGGCCCTGGCTAAGGATTTT +
Preference number: 2 (lower is better)
Translates to: VISVISEEIKGTPFSLSLSLLHL*ALAKDF
Trigger: AAAATCCTTAGCCAGGGCTCAGAGATGAAGCAGTGA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTACTGCAGACTAGATTaGTTGATTCAAGGCTCACAA +
Preference number: 2 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHYCRLD*LIQGSQ
Trigger: TTGTGAGCCTTGAATCAACCAATCTAGTCTGCAGTA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATACCTTCCCACATGCATaGTATCCAAGGTCGACAGAC +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYTFPHA*YPRSTD
Trigger: GTCTGTCGACCTTGGATATCATGCATGTGGGAAGGT...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTATATATGTAATGTGTaGAAATGCCTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHYICNV*KCLCVC
Trigger: ACACACACACAGGCATTTCCACACATTACATATATA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCTTTTTCCATGGCCTTaGCCATCTTTGCTACTGCGC +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVLFPWP*PSLLLR
Trigger: GCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTTTCTAGATGCTATTTaGGTTGTTCTAGTCCACACT +
Preference number: 2 (lower is better)
Translates to: MISKVDRPGLESTLKLLMFLDAI*VVLVHT
Trigger: AGTGTGGACTAGAACAACCCAAATAGCATCTAGAAA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR CAA 90 bp GATGTATTTGAGATGAGTGGGAACTATACATGGGTATCAGCTTTCTaGGTAAATTTCTGCTTTTTCCATGGCCTTGACCATCTTTGCTAC +
Preference number: 2 (lower is better)
Translates to: DVFEMSGNYTWVSAF*VNFCFFHGLDHLCY
Trigger: GTAGCAAAGATGGTCAAGGCCATGGAAAAAGCAGAAATTTACCAAGAAAGCTGATACCCATGTATAGTTCCCACTCATCTCAAATACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAACTCATTGATGGTGAATaGTACCAACCACAGACAGAC +
Preference number: 2 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAELIDGE*YQPQTD
Trigger: GTCTGTCTGTGGTTGGTATCATTCACCATCAATGAG...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATGAAAGAGGGCCTTGCTaGATATTCACTGGAATTTCC +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYERGPC*IFTGIS
Trigger: GGAAATTCCAGTGAATATTCAGCAAGGCCCTCTTTC...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGAGAGATTTTTACTACTaGCCTCACCTCTGCCTCCTC +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVRDFYY*PHLCLL
Trigger: GAGGAGGCAGAGGTGAGGGCAGTAGTAAAAATCTCT...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAACACCCCCAAACCTTCTaGCCACATCTACAAGTTTTA +
Preference number: 2 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEHPQTF*PHLQVL
Trigger: TAAAACTTGTAGATGTGGGCAGAAGGTTTGGGGGTG...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCAAGGTCGACAGACCTaGATTAGAATCCACTCTCAA +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYQGRQT*IRIHSQ
Trigger: TTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAGTTTGCTTCTGCTCTTaGAGATGTGAACAGCTTCTA +
Preference number: 2 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEVCFCS*RCEQLL
Trigger: TAGAAGCTGTTCACATCTTCAAGAGCAGAAGCAAAC...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGGGAAGTGTGACCACCTaGACACGATTGTTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVGSVTT*TRLFFY
Trigger: GTAAAAGAACAATCGTGTGCAGGTGGTCACACTTCC...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCACAGTAAGTGTATTTaGCCAGTAGTGACATTGCCT +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYHSKCI*PVVTLP
Trigger: AGGCAATGTCACTACTGGGCAAATACACTTACTGTG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATGCGTATTGTATTTTCTaGATAAGAAAGGGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYAYCIF*IRKGCL
Trigger: GAGGCAGCCCTTTCTTATGCAGAAAATACAATACGC...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATACTGTACATCCAGTATaGAATGTCCTGTTTCATGGA +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYTVHPV*NVLFHG
Trigger: TCCATGAAACAGGACATTTCATACTGGATGTACAGT...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTCCGAATTTTTGAAATaGGCCCACCTAGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVSEFLK*AHLVQS
Trigger: ACTCTGAACTAGGTGGGCGCATTTCAAAAATTCGGA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCGGTACCAAAGAAGATaGAGTTCAAAATACTGCCAG +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVRYQRR*SSKYCQ
Trigger: CTGGCAGTATTTTGAACTGCATCTTCTTTGGTACCG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR TCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATAAAGAGGAGGAAATTTaGTCCCTGTACAATGAAAGA +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYKEEEI*SLYNER
Trigger: TCTTTCATTGTACAGGGATCAAATTTCCTCCTCTTT...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTCTAGTCCACACTACTaGAGACTAGATTGGTTGATT +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVSSPHY*RLDWLI
Trigger: AATCAACCAATCTAGTCTGCAGTAGTGTGGACTAGA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCTCTCAAGCTTCTCATaGAGTGCGTATTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVLSSFS*SAYCIF
Trigger: GAAAATACAATACGCACTGCATGAGAAGCTTGAGAG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATTTGCTGAATATTCACTaGAATTTCCAGGCTTTTTCC +
Preference number: 2 (lower is better)
Translates to: NYISLLLITVVTNQPPCYLLNIH*NFQAFS
Trigger: GGAAAAAGCCTGGAAATTCCAGTGAATATTCAGCAA...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR CCA 72 bp TTGGGTTGTTCTAGTCCACACTACTGCAGACTAGATTaGTTGATTCAAGGCTCACAAGGGAACCTCAAGGGG +
Preference number: 3 (lower is better)
Translates to: LGCSSPHYCRLD*LIQGSQGNLKG
Trigger: CCCCTTGAGGTTCCCTTGTGAGCCTTGAATCAACCAATCTAGTCTGCAGTAGTGTGGACTAGAACAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR CCA 72 bp CCTTCCCACATGCATGATATCCAAGGTCGACAGACCTaGATTAGAATCCACTCTCAAGCTTCTCATGCAGTG +
Preference number: 3 (lower is better)
Translates to: PSHMHDIQGRQT*IRIHSQASHAV
Trigger: CACTGCATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACACCACCTGCACACGATaGTTCTTTTACCAGTATGTG +
Preference number: 3 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHTTCTR*FFYQYV
Trigger: CACATACTGGTAAAAGAACAATCGTGTGCAGGTGGT...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR TCA 72 bp AGCTTTCTTGGTAAATTTCTGCTTTTTCCATGGCCTTaGCCATCTTTGCTACTGCGCAGTGAACCAGGACTT +
Preference number: 3 (lower is better)
Translates to: SFLGKFLLFPWP*PSLLLRSEPGL
Trigger: AAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAGCAGAAATTTACCAAGAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 72 bp TCTAGATGCTATTTGGGTTGTTCTAGTCCACACTACTaGAGACTAGATTGGTTGATTCAAGGCTCACAAGGG +
Preference number: 3 (lower is better)
Translates to: SRCYLGCSSPHY*RLDWLIQGSQG
Trigger: CCCTTGTGAGCCTTGAATCAACCAATCTAGTCTGCAGTAGTGTGGACTAGAACAACCCAAATAGCATCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 72 bp AAGAAAGGGCTGCCTCTAGAACACAGTAAGTGTATTTaGCCAGTAGTGACATTGCCTACATATAGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: KKGLPLEHSKCI*PVVTLPTYSQV
Trigger: CACTTGGCTATATGTAGGCAATGTCACTACTGGGCAAATACACTTACTGTGTTCTAGAGGCAGCCCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 72 bp CCTGGATTAGAATCCACTCTCAAGCTTCTCATGCAGTaGGTATTGTATTTTCTGCATAAGAAAGGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: PGLESTLKLLMQ*VLYFLHKKGLP
Trigger: AGGCAGCCCTTTCTTATGCAGAAAATACAATACGCACTGCATGAGAAGCTTGAGAGTGGATTCTAATCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 72 bp CGCAGTGAACCAGGACTTAATTTCTCACACTGTTTCTaGAGGTTCCGGTACCAAAGAAGATGCAGTTCAAAA +
Preference number: 3 (lower is better)
Translates to: RSEPGLNFSHCF*RFRYQRRCSSK
Trigger: TTTTGAACTGCATCTTCTTTGGTACCGGAACCTGCAGAAACAGTGTGAGAAATTAAGTCCTGGTTCACTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR GCA 72 bp TTCTGCTTTTTCCATGGCCTTGACCATCTTTGCTACTaGGCAGTGAACCAGGACTTAATTTCTCACACTGTT +
Preference number: 3 (lower is better)
Translates to: FCFFHGLDHLCY*AVNQDLISHTV
Trigger: AACAGTGTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR TCA 72 bp CTTTTAAGCCTGAACACAATCCACACTACTCAACCTTaGATCCCAACCCCTGACTCATTGATGGTGAATGAT +
Preference number: 3 (lower is better)
Translates to: LLSLNTIHTTQP*IPTPDSLMVND
Trigger: ATCATTCACCATCAATGAGTCAGGGGTTGGGATTCAAGGTTGAGTAGTGTGGATTGTGTTCAGGCTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATGCAGACTAGATTGGTaGATTCAAGGCTCACAAGGG +
Preference number: 3 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAECRLDW*IQGSQG
Trigger: CCCTTGTGAGCCTTGAATCAACCAATCTAGTCTGCA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCCAACCCCTGACTCATaGATGGTGAATGATACCAAC +
Preference number: 3 (lower is better)
Translates to: NYISLLLITVVTNQPPCYPTPDS*MVNDTN
Trigger: GTTGGTATCATTCACCATCAATGAGTCAGGGGTTGG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAACTGCAGGGATTCTCCTaGAAAACGGAGTATGGAATC +
Preference number: 3 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAELQGFS*KTEYGI
Trigger: GATTCCATACTCCGTTTTCAAGGAGAATCCCTGCAG...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATTCCCATCCGAATTTTaGAAATGCGCCCACCTAGTT +
Preference number: 3 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEFPSEF*KCAHLV
Trigger: AACTAGGTGGGCGCATTTCAAAAATTCGGATGGGAA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCCAATAGACACTAAGTaGGAAAAACATCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: NYISLLLITVVTNQPPCYPIDTK*EKHQPR
Trigger: TCTGGGCTGATGTTTTTCCAACTTAGTGTCTATTGG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCTTTCTAGATGCTATTaGGGTTGTTCTAGTCCACAC +
Preference number: 3 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVLSRCY*GCSSPH
Trigger: GTGTGGACTAGAACAACCCAAATAGCATCTAGAAAG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAACTCATGCAGTGCGTATaGTATTTTCTGCATAAGAAA +
Preference number: 3 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAELMQCV*YFLHKK
Trigger: TTTCTTATGCAGAAAATACAATACGCACTGCATGAG...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCGCCGACGCCGGCGATaGGGGTGGTCTTCAGACTGC +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHRRRRR*GWSSDC
Trigger: GCAGTCTGAAGACCACCCTCATCGCCGGCGTCGGCG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACGGGTGGTCTTCAGACTaGCGGGCCTGCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHGWSSD*RACSMR
Trigger: CCTCATGCTGCAGGCCCGGCAGTCTGAAGACCACCC...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACGGACCCGGACGTGCCTaGTATATGGCTCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHGPGRA*YMARAL
Trigger: GAGTGCCCGAGCCATATAGCAGGCACGTCCGGGTCC...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACGTGAGGACCCGGACGTaGCTGCTATATGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHVRTRT*LLYGSG
Trigger: GCCCGAGCCATATAGCAGGCACGTCCGGGTCCTCAC...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACGGCTGGGCAACTCTATaGGCACCCACACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHGWATL*APTLLH
Trigger: GTGGAGGAGTGTGGGTGCTCATAGAGTTGCCCAGCC...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTGCGGGTGCTTCTGCTaGTGGAAGAGGCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHCGCFC*WKRRMV
Trigger: CACCATCCGCCTCTTCCAGCAGCAGAAGCACCCGCA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACGTTGGGTACATCCTTTaGGAGGGCGGCCAGCGCACA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHVGYIL*EGGQRT
Trigger: TGTGCGCTGGCCGCCCTCCCAAAGGATGTACCCAAC...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGCCTTGGGTACCGGCTaGGTGACATCGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLALGTG*VTSGLF
Trigger: GAAGAGACCCGATGTCACCCAGCCGGTACCCAAGGC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACAGGGAGCTCTTGCCCTaGTCCAGCAACCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHRELLP*SSNRWM
Trigger: CATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCT...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGACGTGCCTGCTATATaGCTCGGGCACTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLDVPAI*LGHSPS
Trigger: CGAGGGTGAGTGCCCGAGCCATATAGCAGGCACGTC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATCGGGGGCCGCGCTGTaGCCCTCGGATCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAESGAAL*PSDPGV
Trigger: CACCCCAGGATCCGAGGGGCACAGCGCGGCCCCCGA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGCCCTGCGGGTGCTTCTaGTGCTGGAAGAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMPCGCF*CWKRRM
Trigger: CATCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGG...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGGTGTCCAAGCTGCCCTaGGGGTGCTTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMVSKLP*GCFCCW
Trigger: CCAGCAGCAGAAGCACCCGCAGGGCAGCTTGGACAC...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGAGACAGGGAAGACATaGCAGGTGCTCTTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLETGKT*QVLFRA
Trigger: CGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCCAGCAACCGCTGGATaGTGCTGGAGACAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHPATAG*CWRQGR
Trigger: TCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCCCACATGAAGCTTTCTaGTCGCGTTCAGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLPHEAF*SRSEAP
Trigger: CGGCGCTTCTGAACGCGATCAGAAAGCTTCATGTGG...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCCCCTGTGTCCAAGCTaGCCTGCGGGTGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLPLCPS*PAGASA
Trigger: AGCAGAAGCACCCGCAGGGCAGCTTGGACACAGGGG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGGCCTCCACCATCTCTaGCTGAGAGTTGGGTACATC +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLGLHHL*LRVGYI
Trigger: GATGTACCCAACTCTCAGCCAGAGATGGTGGAGGCC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACAGTGCAGCGTCTTCCTaGCTGTTCCTGACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHSAASS*LFLTRQ
Trigger: TTGCCGAGTCAGGAACAGCCAGGAAGACGCTGCACT...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGCCAGGAGAACCAAGCTaGCGCCACTCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMPGEPS*RHSPGT
Trigger: AGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGG...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCACCCTCGCAGTAGTTaGCATGATAGCCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHHPRSS*HDSQRE
Trigger: CTCCCTCTGGCTATCATGCCAACTACTGCGAGGGTG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCAAGCTGCCCTGCGGGTaGTTCTGCTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLKLPCG*FCCWKR
Trigger: CCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAGCTT...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGGAAGACATGCCAGGTaGTCTTCCGAGCGTCTACTA +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLGRHAR*SSERLL
Trigger: TAGTAGACGCTCGGAAGAGCACCTGGCATGTCTTCC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTTCCTCATCTGCTCCTaGCCCACCTTCACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLFLICS*PTFTSA
Trigger: GGCGGAGGTGAAGGTGGGGCAGGAGCAGATGAGGAA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGGCCTTGACCATCTTTaGTACTGCGCAGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLGLDHL*YCAVNQ
Trigger: CTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTGGTCCTGGTCCTGTTaGCCTTGGGGACTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHWSWSC*PWGLLG
Trigger: TCCTAAAAGTCCCCAAGGCCAACAGGACCAGGACCA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGGGGTGCTTCTGCTGCTaGAAGAGGCGGATGGTGACT +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMGCFCC*KRRMVT
Trigger: AGTCACCATCCGCCTCTTCCAGCAGCAGAAGCACCC...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTGGTCCAGCAACCGCTaGATGCTGCTGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLWSSNR*MLLETG
Trigger: CCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTGCTCCCTTTCCCCCTaGGCTGGGCAACTCTATGAG +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMCSLSP*AGQLYE
Trigger: CTCATAGAGTTGCCCAGCCCAGGGGGAAAGGGAGCA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTCCACCATCTCTGGCTaGGAGTTGGGTACATCCTTT +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHSTISG*ELGTSF
Trigger: AAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTGGGTACCGGCTGGGTaGCATCGGGTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLWVPAG*HRVSSS
Trigger: TGAAGAAGAGACCCGATGTCACCCAGCCGGTACCCA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGTAGGAAAGTGCCTGTaGTGGGCCCTTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLVGKCL*WALSNS
Trigger: TGAGTTTGAAAGGGCCCATCACAGGCACTTTCCTAC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCCTTTTTCCATGGCCTTaGCCATCTTTGCTACTGCGC +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLLFPWP*PSLLLR
Trigger: GCGCAGTAGCAAAGATGGTCAAGGCCATGGAAAAAG...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGGCAACCGCTGGATGCTaGTGGAGACAGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMATAGC*WRQGRH
Trigger: ATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGC...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTCAGACTGCCGGGCCTaGAGCATGAGGAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLSDCRA*SMRKGL
Trigger: CAGACCTTTCCTCATGCTGCAGGCCCGGCAGTCTGA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAGCCGGGCCTGCAGCATaGGGAAAGGTCTGTGCGACT +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEAGPAA*GKVCAT
Trigger: AGTCGCACAGACCTTTCCTCATGCTGCAGGCCCGGC...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAACGTCCAGGGAGCTCTTaGCCTGGTCCAGCAACCGCT +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAERPGSS*PGPATA
Trigger: AGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACG...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTGCCACTGTCTTCTCTaGACAACTCTTGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHCHCLL*TTLAPF
Trigger: AAAGGGAGCAAGAGTTGTCCAGAGAAGACAGTGGCA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGACCCACCTTCCCACATaGATGATATCCAAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMTHLPT*MISKVD
Trigger: GTCGACCTTGGATATCATGCATGTGGGAAGGTGGGT...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTTCTCACACTGTTTCTaGAGGTTCCGGTACCAAAGA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHFSHCF*RFRYQR
Trigger: TCTTTGGTACCGGAACCTGCAGAAACAGTGTGAGAA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCACCCCCAAACCTTCTaGCCACATCTACAAGTTTTA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHHPQTF*PHLQVL
Trigger: TAAAACTTGTAGATGTGGGCAGAAGGTTTGGGGGTG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTCTCTGGCTGAGAGTTaGGTACATCCTTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLSLAES*VHPLGG
Trigger: CCCTCCCAAAGGATGTACCCAACTCTCAGCCAGAGA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCGGTCACTGCCTTCCTTaGAAATCTCGAAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLGHCLP*KSRSAA
Trigger: CGCTGCACTTCGAGATTTCCAAGGAAGGCAGTGACC...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGGTGGTAAGAGCTGTCTaGGCTCCTCTTCATGGTATT +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMVVRAV*APLHGI
Trigger: AATACCATGAAGAGGAGCTCAGACAGCTCTTACCAC...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTTAAAATGTGCTTCTTaGCGGCCTCCACCATCTCTG +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMLKCAS*RPPPSL
Trigger: CAGAGATGGTGGAGGCCGTCAAGAAGCACATTTTAA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCACACTACTCAACCTTaGATCCCAACCCCTGACTCA +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLHTTQP*IPTPDS
Trigger: TGAGTCAGGGGTTGGGATTCAAGGTTGAGTAGTGTG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCACCTTCCCACATGCATaGTATCCAAGGTCGACAGAC +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLTFPHA*YPRSTD
Trigger: GTCTGTCGACCTTGGATATCATGCATGTGGGAAGGT...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGTTTGCTTCTGCTCTTaGAGATGTGAACAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLVCFCS*RCEQLL
Trigger: TAGAAGCTGTTCACATCTTCAAGAGCAGAAGCAAAC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTTGGAAATCTCGAAGTaGAGCGTCTTCCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMLEISK*SVFLAV
Trigger: AACAGCCAGGAAGACGCTGCACTTCGAGATTTCCAA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCCACTCTCCTGGCACTaGTCACAGGCAATCCGAACG +
Preference number: 4 (lower is better)
Translates to: NYISLLLITVVTNQPPCYPLSWH*SQAIRT
Trigger: CGTTCGGATTGCCTGTGAGCAGTGCCAGGAGAGTGG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGATGAGGAAAGGTCTGTaGGACTGCTCCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMMRKGL*DCSFSS
Trigger: TGAGGAAAAGGAGCAGTCGCACAGACCTTTCCTCAT...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTCCTGTCTCTTTCACTaGTTCATCTCTGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLSCLFH*FISEPW
Trigger: CCAGGGCTCAGAGATGAAGCAGTGAAAGAGACAGGA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCACAGTAAGTGTATTTaGCCAGTAGTGACATTGCCT +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHHSKCI*PVVTLP
Trigger: AGGCAATGTCACTACTGGGCAAATACACTTACTGTG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACGCGTATTGTATTTTCTaGATAAGAAAGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHAYCIF*IRKGCL
Trigger: GAGGCAGCCCTTTCTTATGCAGAAAATACAATACGC...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTGCACGCTCCACCACTaGCAGGTCACTGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVCTLHH*QVTAFL
Trigger: AAGGAAGGCAGTGACCTGTCAGTGGTGGAGCGTGCA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTCTTACAGCAGATGTTaGCCTTGCCATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLSYSRC*PCHHTP
Trigger: TGGAGTGTGATGGCAAGGTCAACATCTGCTGTAAGA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCAGAAAAAGGAAGTGTaGCCACCTGCACACGATTGT +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLQKKEV*PPAHDC
Trigger: ACAATCGTGTGCAGGTGGTCACACTTCCTTTTTCTG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGATAGCAGATGTATTTaGGATGAGTGGGAACTATAC +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLDSRCI*DEWELY
Trigger: GTATAGTTCCCACTCATCTCAAATACATCTGCTATC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCGTCTTAGAGAAAGAGTaGGGAGATAGTAAGGTTAGA +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLVLEKE*GDSKVR
Trigger: TCTAACCTTACTATCTCCTCACTCTTTCTCTAAGAC...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACAACTGTACAAAATATTaGCTGCATGCCTCGCAAACA +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHNCTKY*LHASQT
Trigger: TGTTTGCGAGGCATGCAGTCAATATTTTGTACAGTT...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCGCTATCAGGCGTTGCTaGATACTGTCCACTAACTGT +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLAIRRC*ILSTNC
Trigger: ACAGTTAGTGGACAGTATTCAGCAACGCCTGATAGC...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATTCTCTGGACAACTCTTaGTCCCTTTCCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NYISLLLITVVTNQPPCYSLDNS*SLSPWA
Trigger: AGCCCAGGGGGAAAGGGAGCAAGAGTTGTCCAGAGA...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTCTAGTCCACACTACTaGAGACTAGATTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLSSPHY*RLDWLI
Trigger: AATCAACCAATCTAGTCTGCAGTAGTGTGGACTAGA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCAGAGATTTTTACTACTaGCCTCACCTCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLRDFYY*PHLCLL
Trigger: GAGGAGGCAGAGGTGAGGGCAGTAGTAAAAATCTCT...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGCAAGGTCGACAGACCTaGATTAGAATCCACTCTCAA +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMQGRQT*IRIHSQ
Trigger: TTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTG...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATGGTCCTGTTGGCCTTaGGGACTTTTAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEWSCWP*GLLGRA
Trigger: GGCTCTTCCTAAAAGTCCCCAAGGCCAACAGGACCA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTTGCTGAATATTCACTaGAATTTCCAGGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPTCMISKVDRPGLESTLLLNIH*NFQAFS
Trigger: GGAAAAAGCCTGGAAATTCCAGTGAATATTCAGCAA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCCGACTTTGCCCACATaGAGCTTTCTGATCGCGTTC +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVPTLPT*SFLIAF
Trigger: GAACGCGATCAGAAAGCTTCATGTGGGCAAAGTCGG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGGGTCTCTTCTTCAAGTaGAGCATGTTTAAAATGTGC +
Preference number: 4 (lower is better)
Translates to: MISKVDRPGLESTLKLLMGLFFK*SMFKMC
Trigger: GCACATTTTAAACATGCTGCACTTGAAGAAGAGACC...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACTCAACCCATTGTCAATaGACTGTTTTTCAAAGCATT +
Preference number: 4 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHSTHCQ*TVFQSI
Trigger: AATGCTTTGAAAAACAGTGCATTGACAATGGGTTGA...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
3UTR CAA 72 bp TTAGAATCCACTCTCAAGCTTCTCATGCAGTGCGTATaGTATTTTCTGCATAAGAAAGGGCTGCCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LESTLKLLMQCV*YFLHKKGLPLE
Trigger: TTCTAGAGGCAGCCCTTTCTTATGCAGAAAATACAATACGCACTGCATGAGAAGCTTGAGAGTGGATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCCTCATGCTGCTAGGTaGAAGAGTGGTTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVPHAAR*KSGCSQ
Trigger: CTGTGAACAACCACTCTTTCACCTAGCAGCATGAGG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCATGATCTCCGAGGTCTaGTCCATAAGTTCATTCATT +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLMISEV*SISSFI
Trigger: AATGAATGAACTTATGGAGCAGACCTCGGAGATCAT...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCCACTGACAGGTCACTaGCTTCCTTGGAAATCTCGA +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVPLTGH*LPWKSR
Trigger: TCGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTGG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCTTTCTTCTTCTTCTTaGCCAGGAGAACCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NYISLLLITVVTNQPPCYLSSSS*PGEPSW
Trigger: CCAGCTTGGTTCTCCTGGGCAAGAAGAAGAAGAAAG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTTGATGACTGTTGAGTaGAAGGACAGTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVLMTVE*KDSEDP
Trigger: CGGGTCCTCACTGTCCTTCCACTCAACAGTCATCAA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAGAAAGAGGGCCTTGCTaGATATTCACTGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEERGPC*IFTGIS
Trigger: GGAAATTCCAGTGAATATTCAGCAAGGCCCTCTTTC...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAGGAAGTGTGACCACCTaGACACGATTGTTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEGSVTT*TRLFFY
Trigger: GTAAAAGAACAATCGTGTGCAGGTGGTCACACTTCC...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCAATGACAGCCTGAAGTaGTTAAAATGTGTATGGACA +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLNDSLK*LKCVWT
Trigger: TGTCCATACACATTTTAAGCACTTCAGGCTGTCATT...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGGACCATCTTTGCTACTaGGCAGTGAACCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVDHLCY*AVNQDL
Trigger: TAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTC...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTGCAGGGATTCTCCTTaGAAACGGAGTATGGAATCA +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVCRDSP*KRSMES
Trigger: TGATTCCATACTCCGTTTTCAAGGAGAATCCCTGCA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATCCGAATTTTTGAAATaGGCCCACCTAGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAESEFLK*AHLVQS
Trigger: ACTCTGAACTAGGTGGGCGCATTTCAAAAATTCGGA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCATCATAGTACAACATaGACATGGGTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVHHSTT*TWVSAW
Trigger: CCAAGCTGAGACCCATGTCCATGTTGTACTATGATG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCACCAAAATATCCGCTaGAATGCCATAGAAATAAAT +
Preference number: 4 (lower is better)
Translates to: VISVISEEIKGTPFSLSLHQNIR*NAIEIN
Trigger: ATTTATTTCTATGGCATTCCAGCGGATATTTTGGTG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAACTGTACATCCAGTATaGAATGTCCTGTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAETVHPV*NVLFHG
Trigger: TCCATGAAACAGGACATTTCATACTGGATGTACAGT...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGAGCATTCATTTTCTCTaGCCCATACAACAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVSIHFL*PIQQLL
Trigger: GAGAAGCTGTTGTATGGGTCAGAGAAAATGAATGCT...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATTATAATCCAGCAACTTaGCAACAGAAATCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NYISLLLITVVTNQPPCYYNPAT*QQKSSQ
Trigger: CTGAGAGGATTTCTGTTGGCAAGTTGCTGGATTATA...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAACTCTCAAGCTTCTCATaGAGTGCGTATTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAELSSFS*SAYCIF
Trigger: GAAAATACAATACGCACTGCATGAGAAGCTTGAGAG...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATATGGCCATCTACTCTTaGCTTAAAACTTTTCTCACC +
Preference number: 4 (lower is better)
Translates to: NYISLLLITVVTNQPPCYMAIYS*LKTFLT
Trigger: GGTGAGAAAAGTTTTAAGGCAAGAGTAGATGGCCAT...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATACTGCAGACTAGATTaGTTGATTCAAGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEYCRLD*LIQGSQ
Trigger: TTGTGAGCCTTGAATCAACCAATCTAGTCTGCAGTA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAAGTGGGAACTATACATaGGTATCAGCTTTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAESGNYT*VSAFLV
Trigger: TACCAAGAAAGCTGATACCCATGTATAGTTCCCACT...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR TCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAAAAGAGGAGGAAATTTaGTCCCTGTACAATGAAAGA +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEKEEEI*SLYNER
Trigger: TCTTTCATTGTACAGGGATCAAATTTCCTCCTCTTT...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATCATGGCTTTCTAGATaGTATTTGGGTTGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAESWLSR*YLGCSS
Trigger: ACTAGAACAACCCAAATAGCATCTAGAAAGCCATGA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATTTCTAGATGCTATTTaGGTTGTTCTAGTCCACACT +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEFLDAI*VVLVHT
Trigger: AGTGTGGACTAGAACAACCCAAATAGCATCTAGAAA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGGATAATATGGGTCCGTaGTTAATACAACTGAGACAT +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVDNMGP*LIQLRH
Trigger: ATGTCTCAGTTGTATTAAGCACGGACCCATATTATC...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGATTGAAAAGAGAAGTTaGCAAAAGGTGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVIEKRS*QKVHRK
Trigger: TTTCCTGTGCACCTTTTGGCAACTTCTCTTTTCAAT...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR GCA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAAAAATATTGACTGCATaGCTCGCAAACACCAAAATA +
Preference number: 4 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEKILTA*LANTKI
Trigger: TATTTTGGTGTTTGCGAGGCATGCAGTCAATATTTT...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CCA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATTATATATGTAATGTGTaGAAATGCCTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NYISLLLITVVTNQPPCYYICNV*KCLCVC
Trigger: ACACACACACAGGCATTTCCACACATTACATATATA...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 90 bp GCGAGCCGGGAGCGCTCGCGCACCAGCCAACTGCCCCCTTCTGAGTaGGGAGCGCGGTCCTCCAGCGACTGCACTAGCAAAGTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ASRERSRTSQLPPSE*GARSSSDCTSKVAR
Trigger: GCGGGCCACTTTGCTAGTGCAGTCGCTGGAGGACCGCGCTCCGCACTCAGAAGGGGGCAGTTGGCTGGTGCGCGAGCGCTCCCGGCTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS GCA 90 bp GGATCACGCCGGAACGCGGCCGCTGCTCGAGCCCAGCTCGCAGGATaGCTGGAGCCAGGGCCAAGCCGGTCTAAGCGGCAGCCTCTATTT +
Preference number: 5 (lower is better)
Translates to: GSRRNAAAARAQLAG*LEPGPSRSKRQPLF
Trigger: AAATAGAGGCTGCCGCTTAGACCGGCTTGGCCCTGGCTCCAGGCATCCTGCGAGCTGGGCTCGAGCAGCGGCCGCGTTCCGGCGTGATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS CCA 90 bp CTTGACGGCCTCCACCATCTCTGGCTGAGAGTTGGGTACATCCTTTaGGAGGGCGGCCAGCGCACAGGACGGACAGTCGGGGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: LDGLHHLWLRVGYIL*EGGQRTGRTVGGRA
Trigger: AGCGCGGCCCCCGACTGTCCGTCCTGTGCGCTGGCCGCCCTCCCAAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGAGGCCGTCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS CCA 90 bp CACGCCGGAACGCGGCCGCTGCTCGAGCCCAGCTCGCAGGATGCCTaGAGCCAGGGCCAAGCCGGTCTAAGCGGCAGCCTCTATTTTTAC +
Preference number: 5 (lower is better)
Translates to: HAGTRPLLEPSSQDA*SQGQAGLSGSLYFY
Trigger: GTAAAAATAGAGGCTGCCGCTTAGACCGGCTTGGCCCTGGCTCCAGGCATCCTGCGAGCTGGGCTCGAGCAGCGGCCGCGTTCCGGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS GCA 90 bp AGCCAACTGCCCCCTTCTGAGTGCGGAGCGCGGTCCTCCAGCGACTaGACTAGCAAAGTGGCCCGCTGCCACCGCGTTATTCACCTAGTG +
Preference number: 5 (lower is better)
Translates to: SQLPPSECGARSSSD*TSKVARCHRVIHLV
Trigger: CACTAGGTGAATAACGCGGTGGCAGCGGGCCACTTTGCTAGTGCAGTCGCTGGAGGACCGCGCTCCGCACTCAGAAGGGGGCAGTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS TCA 90 bp ATGTTGACCTTGCCATCACACTCCAAGCCCCGCCGACGCCGGCGATaGGGGTGGTCTTCAGACTGCCGGGCCTGCAGCATGAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: MLTLPSHSKPRRRRR*GWSSDCRACSMRKG
Trigger: ACCTTTCCTCATGCTGCAGGCCCGGCAGTCTGAAGACCACCCTCATCGCCGGCGTCGGCGGGGCTTGGAGTGTGATGGCAAGGTCAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp TCCTCGGCCTCTTCCCCTGTGTCCAAGCTGCCCTGCGGGTGCTTCTaGTGCTGGAAGAGGCGGATGGTGACTTTGGTCCTGGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSASSPVSKLPCGCF*CWKRRMVTLVLVLL
Trigger: CAACAGGACCAGGACCAAAGTCACCATCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAGCTTGGACACAGGGGAAGAGGCCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp TCCGAACGTCCAGGGAGCTCTTGCCCTGGTCCAGCAACCGCTGGATaGTGCTGGAGACAGGGAAGACATGCCAGGTGCTCTTCCGAGCGT +
Preference number: 5 (lower is better)
Translates to: SERPGSSCPGPATAG*CWRQGRHARCSSER
Trigger: ACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp GCCTCTTCCCCTGTGTCCAAGCTGCCCTGCGGGTGCTTCTGCTGCTaGAAGAGGCGGATGGTGACTTTGGTCCTGGTCCTGTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: ASSPVSKLPCGCFCC*KRRMVTLVLVLLAL
Trigger: CAAGGCCAACAGGACCAGGACCAAAGTCACCATCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAGCTTGGACACAGGGGAAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS TCA 90 bp GACGCCGGCGATGAGGGTGGTCTTCAGACTGCCGGGCCTGCAGCATaGGGAAAGGTCTGTGCGACTGCTCCTTTTCCTCATCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DAGDEGGLQTAGPAA*GKVCATAPFPHLLL
Trigger: CAGGAGCAGATGAGGAAAAGGAGCAGTCGCACAGACCTTTCCTCATGCTGCAGGCCCGGCAGTCTGAAGACCACCCTCATCGCCGGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp GAACGTCCAGGGAGCTCTTGCCCTGGTCCAGCAACCGCTGGATGCTaGTGGAGACAGGGAAGACATGCCAGGTGCTCTTCCGAGCGTCTA +
Preference number: 5 (lower is better)
Translates to: ERPGSSCPGPATAGC*WRQGRHARCSSERL
Trigger: TAGACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp TCTCCTGGCACTGCTCACAGGCAATCCGAACGTCCAGGGAGCTCTTaGCCTGGTCCAGCAACCGCTGGATGCTGCTGGAGACAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: SPGTAHRQSERPGSS*PGPATAGCCWRQGR
Trigger: TCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTGCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp TTCTTCTTGCCCAGGAGAACCAAGCTGGCGCCACTCTCCTGGCACTaGTCACAGGCAATCCGAACGTCCAGGGAGCTCTTGCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: FFLPRRTKLAPLSWH*SQAIRTSRELLPWS
Trigger: GGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGGGCAAGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp TCTTCAGACTGCCGGGCCTGCAGCATGAGGAAAGGTCTGTGCGACTaGTCCTTTTCCTCATCTGCTCCTGCCCCACCTTCACCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: SSDCRACSMRKGLCD*SFSSSAPAPPSPPP
Trigger: GGGCGGAGGTGAAGGTGGGGCAGGAGCAGATGAGGAAAAGGAGCAGTCGCACAGACCTTTCCTCATGCTGCAGGCCCGGCAGTCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp CGTCCAGGGAGCTCTTGCCCTGGTCCAGCAACCGCTGGATGCTGCTaGAGACAGGGAAGACATGCCAGGTGCTCTTCCGAGCGTCTACTA +
Preference number: 5 (lower is better)
Translates to: RPGSSCPGPATAGCC*RQGRHARCSSERLL
Trigger: TAGTAGACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp GCAATCCGAACGTCCAGGGAGCTCTTGCCCTGGTCCAGCAACCGCTaGATGCTGCTGGAGACAGGGAAGACATGCCAGGTGCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: AIRTSRELLPWSSNR*MLLETGKTCQVLFR
Trigger: TCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp TGGCACTGCTCACAGGCAATCCGAACGTCCAGGGAGCTCTTGCCCTaGTCCAGCAACCGCTGGATGCTGCTGGAGACAGGGAAGACATGC +
Preference number: 5 (lower is better)
Translates to: WHCSQAIRTSRELLP*SSNRWMLLETGKTC
Trigger: GCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp GGGTGGTCTTCAGACTGCCGGGCCTGCAGCATGAGGAAAGGTCTGTaGGACTGCTCCTTTTCCTCATCTGCTCCTGCCCCACCTTCACCT +
Preference number: 5 (lower is better)
Translates to: GWSSDCRACSMRKGL*DCSFSSSAPAPPSP
Trigger: AGGTGAAGGTGGGGCAGGAGCAGATGAGGAAAAGGAGCAGTCGCACAGACCTTTCCTCATGCTGCAGGCCCGGCAGTCTGAAGACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS TCA 90 bp CCAAGCTGCCCTGCGGGTGCTTCTGCTGCTGGAAGAGGCGGATGGTaGCTTTGGTCCTGGTCCTGTTGGCCTTGGGGACTTTTAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PSCPAGASAAGRGGW*LWSWSCWPWGLLGR
Trigger: TCTTCCTAAAAGTCCCCAAGGCCAACAGGACCAGGACCAAAGTCACCATCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp TTCTTCTTCTTCTTGCCCAGGAGAACCAAGCTGGCGCCACTCTCCTaGCACTGCTCACAGGCAATCCGAACGTCCAGGGAGCTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: FFFFLPRRTKLAPLS*HCSQAIRTSRELLP
Trigger: GGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGGGCAAGAAGAAGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp CCCCCTCCTCTTCTTTCTTCTTCTTCTTGCCCAGGAGAACCAAGCTaGCGCCACTCTCCTGGCACTGCTCACAGGCAATCCGAACGTCCA +
Preference number: 5 (lower is better)
Translates to: PPPLLSSSSCPGEPS*RHSPGTAHRQSERP
Trigger: TGGACGTTCGGATTGCCTGTGAGCAGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGGGCAAGAAGAAGAAGAAAGAAGAGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 90 bp CCGCTGCCACCGCGTTATTCACCTAGTGGAGGCGGCCTGATTTACTaGCGACTTCACAAACCCAACTCCACGCTGGAGCATTTGCATGGC +
Preference number: 5 (lower is better)
Translates to: PLPPRYSPSGGGLIY*RLHKPNSTLEHLHG
Trigger: GCCATGCAAATGCTCCAGCGTGGAGTTGGGTTTGTGAAGTCGCCAGTAAATCAGGCCGCCTCCACTAGGTGAATAACGCGGTGGCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS TCA 90 bp TCATCCTCTATCTCCACATACCCGTTCTCCCCGACTTTGCCCACATaGAGCTTTCTGATCGCGTTCAGAAGCGCCGCCTTGGGTACCGGC +
Preference number: 5 (lower is better)
Translates to: SSSISTYPFSPTLPT*SFLIAFRSAALGTG
Trigger: GCCGGTACCCAAGGCGGCGCTTCTGAACGCGATCAGAAAGCTTCATGTGGGCAAAGTCGGGGAGAACGGGTATGTGGAGATAGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS TCA 90 bp AAAGTGGCCCGCTGCCACCGCGTTATTCACCTAGTGGAGGCGGCCTaGTTTACTGGCGACTTCACAAACCCAACTCCACGCTGGAGCATT +
Preference number: 5 (lower is better)
Translates to: KVARCHRVIHLVEAA*FTGDFTNPTPRWSI
Trigger: AATGCTCCAGCGTGGAGTTGGGTTTGTGAAGTCGCCAGTAAATCAGGCCGCCTCCACTAGGTGAATAACGCGGTGGCAGCGGGCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS GCA 90 bp CCCTGGTCCAGCAACCGCTGGATGCTGCTGGAGACAGGGAAGACATaGCAGGTGCTCTTCCGAGCGTCTACTACTTTTTCAGAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: PWSSNRWMLLETGKT*QVLFRASTTFSESN
Trigger: GTTGCTCTCTGAAAAAGTAGTAGACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp CGCCCTTCTTTTTCCCTTCCCCCTCCTCTTCTTTCTTCTTCTTCTTaGCCAGGAGAACCAAGCTGGCGCCACTCTCCTGGCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: RPSFSLPPPLLSSSS*PGEPSWRHSPGTAH
Trigger: GTGAGCAGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGGGCAAGAAGAAGAAGAAAGAAGAGGAGGGGGAAGGGAAAAAGAAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS TCA 90 bp AGCATGTTTAAAATGTGCTTCTTGACGGCCTCCACCATCTCTGGCTaGGAGTTGGGTACATCCTTTGGGAGGGCGGCCAGCGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: SMFKMCFLTASTISG*ELGTSFGRAASAQD
Trigger: GTCCTGTGCGCTGGCCGCCCTCCCAAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGAGGCCGTCAAGAAGCACATTTTAAACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS GCA 90 bp CTCGGATCCTGGGGTGGGGGAACTCCTCACTATAATCCAGCAACTTaGCAACAGAAATCCTCTCAGCCAAAGCAAGGGCATCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGSWGGGTPHYNPAT*QQKSSQPKQGHPGS
Trigger: GCTGCCAGGATGCCCTTGCTTTGGCTGAGAGGATTTCTGTTGGCAAGTTGCTGGATTATAGTGAGGAGTTCCCCCACCCCAGGATCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS GCA 90 bp CCACCCCCTTTCTCAACTGCAGGCAGTGACACCTGCTGTTCCTTCTaGCTTAAGTGCTCCTGCCCCAACTCCAACATACCACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: PPPFSTAGSDTCCSF*LKCSCPNSNIPPLV
Trigger: CACTAAGGGTGGTATGTTGGAGTTGGGGCAGGAGCACTTAAGGCAGAAGGAACAGCAGGTGTCACTGCCTGCAGTTGAGAAAGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 90 bp GAATGTCAGCTCTTGCCCAGTCCTGTTCTCTGGGGTCTAAGGCCTTaGGAATTCCACCCCCTTTCTCAACTGCAGGCAGTGACACCTGCT +
Preference number: 5 (lower is better)
Translates to: ECQLLPSPVLWGLRP*EFHPLSQLQAVTPA
Trigger: AGCAGGTGTCACTGCCTGCAGTTGAGAAAGGGGGTGGAATTCTCAAGGCCTTAGACCCCAGAGAACAGGACTGGGCAAGAGCTGACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 90 bp AGAAAGTGGCTGGGACTTTGGGCTCTGTACATGCTGTTCCTCCCTTaGATGTCAGCTCTTGCCCAGTCCTGTTCTCTGGGGTCTAAGGCC +
Preference number: 5 (lower is better)
Translates to: RKWLGLWALYMLFLP*MSALAQSCSLGSKA
Trigger: GGCCTTAGACCCCAGAGAACAGGACTGGGCAAGAGCTGACATTCAAGGGAGGAACAGCATGTACAGAGCCCAAAGTCCCAGCCACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 90 bp TTAGGAAGAGCCAGACTTCTGCACGCTCCACCACTGACAGGTCACTaGCTTCCTTGGAAATCTCGAAGTGCAGCGTCTTCCTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LGRARLLHAPPLTGH*LPWKSRSAASSWLF
Trigger: GAACAGCCAGGAAGACGCTGCACTTCGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTGGTGGAGCGTGCAGAAGTCTGGCTCTTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp CCAGCAACCGCTGGATGCTGCTGGAGACAGGGAAGACATGCCAGGTaGTCTTCCGAGCGTCTACTACTTTTTCAGAGAGCAACAGTTCAC +
Preference number: 5 (lower is better)
Translates to: PATAGCCWRQGRHAR*SSERLLLFQRATVH
Trigger: GTGAACTGTTGCTCTCTGAAAAAGTAGTAGACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 90 bp GCCTTGAGAATTCCACCCCCTTTCTCAACTGCAGGCAGTGACACCTaGTGTTCCTTCTGCCTTAAGTGCTCCTGCCCCAACTCCAACATA +
Preference number: 5 (lower is better)
Translates to: ALRIPPPFSTAGSDT*CSFCLKCSCPNSNI
Trigger: TATGTTGGAGTTGGGGCAGGAGCACTTAAGGCAGAAGGAACAGCAGGTGTCACTGCCTGCAGTTGAGAAAGGGGGTGGAATTCTCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS-3UTR CAA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACAGGCGGATGGTGACTTaGGTCCTGGTCCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHRRMVT*VLVLLA
Trigger: GGCCAACAGGACCAGGACCAAAGTCACCATCCGCCT...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 90 bp GCTCAGTATCCAACAGAAAGTGGCTGGGACTTTGGGCTCTGTACATaGTGTTCCTCCCTTGAATGTCAGCTCTTGCCCAGTCCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: AQYPTESGWDFGLCT*CSSLECQLLPSPVL
Trigger: GAGAACAGGACTGGGCAAGAGCTGACATTCAAGGGAGGAACAGCATGTACAGAGCCCAAAGTCCCAGCCACTTTCTGTTGGATACTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS-3UTR CAA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGAGTTGGGTACATCCTTaGGGAGGGCGGCCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: MISKVDRPGLESTLKLLMSWVHP*GGRPAH
Trigger: GTGCGCTGGCCGCCCTCCCAAAGGATGTACCCAACT...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 90 bp ACTGCAGGCAGTGACACCTGCTGTTCCTTCTGCCTTAAGTGCTCCTaGCCCAACTCCAACATACCACCCTTAGTGCTGCCTTTAATAATG +
Preference number: 5 (lower is better)
Translates to: TAGSDTCCSFCLKCS*PNSNIPPLVLPLIM
Trigger: CATTATTAAAGGCAGCACTAAGGGTGGTATGTTGGAGTTGGGGCAGGAGCACTTAAGGCAGAAGGAACAGCAGGTGTCACTGCCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 90 bp TTCCTGGCTGTTCCTGACTCGGCAAACGTGATGATCTCCGAGGTCTaGTCCATAAGTTCATTCATTTCTGCCCTCCTTCCAATGTCATCC +
Preference number: 5 (lower is better)
Translates to: FLAVPDSANVMISEV*SISSFISALLPMSS
Trigger: GGATGACATTGGAAGGAGGGCAGAAATGAATGAACTTATGGAGCAGACCTCGGAGATCATCACGTTTGCCGAGTCAGGAACAGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS TCA 90 bp CATCGGGTCTCTTCTTCAAGTGCAGCATGTTTAAAATGTGCTTCTTaGCGGCCTCCACCATCTCTGGCTGAGAGTTGGGTACATCCTTTG +
Preference number: 5 (lower is better)
Translates to: HRVSSSSAACLKCAS*RPPPSLAESWVHPL
Trigger: CAAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGAGGCCGTCAAGAAGCACATTTTAAACATGCTGCACTTGAAGAAGAGACCCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS GCA 90 bp CCTCTTTGCTGGGTCACTGCAGCAGCATTTTCTTTACTTTGCCTCTaGAACACTAAGGAAGGCCTCCTCTCCAGTCATTTCTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: PLCWVTAAAFSLLCL*NTKEGLLSSHFSMK
Trigger: CTTCATGGAGAAATGACTGGAGAGGAGGCCTTCCTTAGTGTTGCAGAGGCAAAGTAAAGAAAATGCTGCTGCAGTGACCCAGCAAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAACGTCCAGGGAGCTCTaGCCCTGGTCCAGCAACCGC +
Preference number: 5 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAETSREL*PWSSNR
Trigger: GCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGT...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCAGCACGATTTGAGGTaGGCAAAGGGGCTATGGCCC +
Preference number: 5 (lower is better)
Translates to: VISVISEEIKGTPFSLSLQHDLR*AKGLWP
Trigger: GGGCCATAGCCCCTTTGCCAACCTCAAATCGTGCTG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAATTCAGAAGCGCCGCCTaGGGTACCGGCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEFRSAA*GTGWVT
Trigger: TGTCACCCAGCCGGTACCCAAGGCGGCGCTTCTGAA...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCTTGGTCCTGGTCCTGTaGGCCTTGGGGACTTTTAGG +
Preference number: 5 (lower is better)
Translates to: VISVISEEIKGTPFSLSLLVLVL*ALGTFR
Trigger: CCTAAAAGTCCCCAAGGCCAACAGGACCAGGACCAA...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCAGCAGATGTTGACCTaGCCATCACACTCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: VISVISEEIKGTPFSLSLQQMLT*PSHSKP
Trigger: GGGCTTGGAGTGTGATGGCAAGGTCAACATCTGCTG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTTCTTACAGCAGATGTaGACCTTGCCATCACACTCC +
Preference number: 5 (lower is better)
Translates to: LPTCMISKVDRPGLESTLFLQQM*TLPSHS
Trigger: GGAGTGTGATGGCAAGGTCAACATCTGCTGTAAGAA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp CATGGCCTTGACCATCTTTGCTACTGCGCAGTGAACCAGGACTTAATTTCTCACCTGCAGGGATTCTCCTaGAAAACGGAGTATGGAATC +
Preference number: 5 (lower is better)
Translates to: HGLDHLCYCAVNQDLISHLQGFS*KTEYGI
Trigger: GATTCCATACTCCGTTTTCAAGGAGAATCCCTGCAG...GTGAGAAATTAAGTCCTGGTTCACTGCGCAGTAGCAAAGATGGTCAAGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 90 bp AAACGTGATGATCTCCGAGGTCTGCTCCATAAGTTCATTCATTTCTaGCCTCCTTCCAATGTCATCCTCTATCTCCACATACCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: KRDDLRGLLHKFIHF*PPSNVILYLHIPVL
Trigger: GAGAACGGGTATGTGGAGATAGAGGATGACATTGGAAGGAGGGCAGAAATGAATGAACTTATGGAGCAGACCTCGGAGATCATCACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS GCA 90 bp ACCCAGGCAGGGTTCAGAACTAAGAGTCTGAGGCTCCTATCCTTTTaGTCGTTACAACTGGGAAGCTGCAACCCATATCATTTTATTCTC +
Preference number: 5 (lower is better)
Translates to: TQAGFRTKSLRLLSF*SLQLGSCNPYHFIL
Trigger: GAGAATAAAATGATATGGGTTGCAGCTTCCCAGTTGTAACGAGCAAAAGGATAGGAGCCTCAGACTCTTAGTTCTGAACCCTGCCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416150.1
CDS-3UTR CAA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTTTAAAATGTGCTTCTaGACGGCCTCCACCATCTCT +
Preference number: 5 (lower is better)
Translates to: LPTCMISKVDRPGLESTLFKMCF*TASTIS
Trigger: AGAGATGGTGGAGGCCGTCAAGAAGCACATTTTAAA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCTTCCCATCCGAATTTTaGAAATGCGCCCACCTAGTT +
Preference number: 5 (lower is better)
Translates to: LPTCMISKVDRPGLESTLFPSEF*KCAHLV
Trigger: AACTAGGTGGGCGCATTTCAAAAATTCGGATGGGAA...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTCTTTCTTCTTCTTCTaGCCCAGGAGAACCAAGCTG +
Preference number: 5 (lower is better)
Translates to: MISKVDRPGLESTLKLLMSFFFF*PRRTKL
Trigger: CAGCTTGGTTCTCCTGGGCAAGAAGAAGAAGAAAGA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp CTTCCCACATGCATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCCTTTCTAGATGCTATTaGGGTTGTTCTAGTCCACAC +
Preference number: 5 (lower is better)
Translates to: LPTCMISKVDRPGLESTLLSRCY*GCSSPH
Trigger: GTGTGGACTAGAACAACCCAAATAGCATCTAGAAAG...GAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCATGCATGTGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS TCA 90 bp CAACACAAAAATCCATGTTTTCAACTTGTCCTTCTCTGTCTTCAGTaGGATGTGTGCCACTGTCACCTATGGCTGAAGCTGTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QHKNPCFQLVLLCLQ*DVCHCHLWLKLFLP
Trigger: AGGAAGGAACAGCTTCAGCCATAGGTGACAGTGGCACACATCTCACTGAAGACAGAGAAGGACAAGTTGAAAACATGGATTTTTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416150.1
CDS CCA 90 bp AAGTTCATCTTAGAACTTGCAACTCCCTGGGAGGATCTCCCTGCCTaGATTTCTATAGTTAACGGAAATCCAGCCATACTTATCACTCGA +
Preference number: 5 (lower is better)
Translates to: KFILELATPWEDLPA*ISIVNGNPAILITR
Trigger: TCGAGTGATAAGTATGGCTGGATTTCCGTTAACTATAGAAATCCAGGCAGGGAGATCCTCCCAGGGAGTTGCAAGTTCTAAGATGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CCA 90 bp CTGGGAACAATCTTCAAGAAGTTCATCTTAGAACTTGCAACTCCCTaGGAGGATCTCCCTGCCTGGATTTCTATAGTTAACGGAAATCCA +
Preference number: 5 (lower is better)
Translates to: LGTIFKKFILELATP*EDLPAWISIVNGNP
Trigger: TGGATTTCCGTTAACTATAGAAATCCAGGCAGGGAGATCCTCCCAGGGAGTTGCAAGTTCTAAGATGAACTTCTTGAAGATTGTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS-3UTR CAA 90 bp ATGATATCCAAGGTCGACAGACCTGGATTAGAATCCACTCTCAAGCTTCTCATGTTCCAGCCGATGTCCTaGAAACTGACAAAGAACTGT +
Preference number: 5 (lower is better)
Translates to: MISKVDRPGLESTLKLLMFQPMS*KLTKNC
Trigger: ACAGTTCTTTGTCAGTTTCAAGGACATCGGCTGGAA...CATGAGAAGCTTGAGAGTGGATTCTAATCCAGGTCTGTCGACCTTGGATATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAGGCACACAGCACGATTaGAGGTTGGCAAAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAEGTQHD*RLAKGL
Trigger: TAGCCCCTTTGCCAACCTCAAATCGTGCTGTGTGCC...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCCCAACCCCTGACTCATaGATGGTGAATGATACCAAC +
Preference number: 5 (lower is better)
Translates to: VISVISEEIKGTPFSLSLPTPDS*MVNDTN
Trigger: GTTGGTATCATTCACCATCAATGAGTCAGGGGTTGG...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCGCTGAGACATGTGGTTaGCTTCTGCTCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: VISVISEEIKGTPFSLSLAETCG*LLLLKM
Trigger: CATCTTCAAGAGCAGAAGCAAACCACATGTCTCAGC...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 90 bp AAACATATCCTCTTTTCCATGACCGTGGACCTCCTTACAACTGTCTaGTGTACATGTATCCCATGCACAAATCTGGGAACAATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KHILFSMTVDLLTTV*CTCIPCTNLGTIFK
Trigger: CTTGAAGATTGTTCCCAGATTTGTGCATGGGATACATGTACAGCAGACAGTTGTAAGGAGGTCCACGGTCATGGAAAAGAGGATATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 90 bp CTGATCACATCACTTCTTCTTGAAAGTCCTTTACTGAATTCCTATTaGTCAGTATCCAACAGAAAGTGGCTGGGACTTTGGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: LITSLLLESPLLNSY*SVSNRKWLGLWALY
Trigger: GTACAGAGCCCAAAGTCCCAGCCACTTTCTGTTGGATACTGAGCAATAGGAATTCAGTAAAGGACTTTCAAGAAGAAGTGATGTGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS-3UTR CAA 90 bp AAACAGGTCTTTTTATTTAACATAAGGCCAAAGAAGCTATCAGGCGTTGCTGAAAGGTCACTGCCTTCCTaGGAAATCTCGAAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: KQVFLFNIRPKKLSGVAERSLPS*EISKCS
Trigger: GCTGCACTTCGAGATTTCCAAGGAAGGCAGTGACCT...TTCAGCAACGCCTGATAGCTTCTTTGGCCTTATGTTAAATAAAAAGACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGCTGGTCCTGTTGGCCTaGGGGACTTTTAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVLVLLA*GTFRKS
Trigger: GCTCTTCCTAAAAGTCCCCAAGGCCAACAGGACCAG...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp GTCATCAGTGTGATTTCAGAAGAAATAAAGGGTACACCATTCTCCCTTTCCCTCACCACCTGCACACGATaGTTCTTTTACCAGTATGTG +
Preference number: 5 (lower is better)
Translates to: VISVISEEIKGTPFSLSLTTCTR*FFYQYV
Trigger: CACATACTGGTAAAAGAACAATCGTGTGCAGGTGGT...GAGGGAAAGGGAGAATGGTGTACCCTTTATTTCTTCTGAAATCACACTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 90 bp ATGACCGTGGACCTCCTTACAACTGTCTGCTGTACATGTATCCCATaGACAAATCTGGGAACAATCTTCAAGAAGTTCATCTTAGAACTT +
Preference number: 5 (lower is better)
Translates to: MTVDLLTTVCCTCIP*TNLGTIFKKFILEL
Trigger: AAGTTCTAAGATGAACTTCTTGAAGATTGTTCCCAGATTTGTGCATGGGATACATGTACAGCAGACAGTTGTAAGGAGGTCCACGGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS-3UTR CAA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTCCACCAGCCGGCTCTaGTATCATGTGGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVSTSRL*YHVVRA
Trigger: AGCTCTTACCACATGATACAAGAGCCGGCTGGTGGA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTGCAGACTAGATTGGTaGATTCAAGGCTCACAAGGG +
Preference number: 5 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVCRLDW*IQGSQG
Trigger: CCCTTGTGAGCCTTGAATCAACCAATCTAGTCTGCA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AATTACATTTCTCTGCTTCTGATAACTGTGGTCACTAATCAACCCCCATGTTATCTACTGCAGACTAGATaGGTTGATTCAAGGCTCACA +
Preference number: 5 (lower is better)
Translates to: NYISLLLITVVTNQPPCYLLQTR*VDSRLT
Trigger: TGTGAGCCTTGAATCAACCAATCTAGTCTGCAGTAG...ATAACATGGGGGTTGATTAGTGACCACAGTTATCAGAAGCAGAGAAATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTGCCCAGTAGTGACATaGCCTACATATAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVCPVVT*PTYSQV
Trigger: CACTTGGCTATATGTAGGCAATGTCACTACTGGGCA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS-3UTR CAA 90 bp AATAAATATGAAATTGGTTGGTCTTCTGGGATAAGAAATTCCCAACTCAGTGTGTTAGCCAAACAGACATaGGTTAAAGAACTGCATGTA +
Preference number: 5 (lower is better)
Translates to: NKYEIGWSSGIRNSQLSVLAKQT*VKELHV
Trigger: TACATGCAGTTCTTTAACCAATGTCTGTTTGGCTAA...CACACTGAGTTGGGAATTTCTTATCCCAGAAGACCAACCAATTTCATATTTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242208.5
CDS GCA 72 bp TGGCAGCTTCCAGGGATCACGCCGGAACGCGGCCGCTaGTCGAGCCCAGCTCGCAGGATGCCTGGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: WQLPGITPERGR*SSPARRMPGAR
Trigger: CCTGGCTCCAGGCATCCTGCGAGCTGGGCTCGAGCAGCGGCCGCGTTCCGGCGTGATCCCTGGAAGCTGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS TCA 72 bp TTGCCATCACACTCCAAGCCCCGCCGACGCCGGCGATaGGGGTGGTCTTCAGACTGCCGGGCCTGCAGCATG +
Preference number: 6 (lower is better)
Translates to: LPSHSKPRRRRR*GWSSDCRACSM
Trigger: CATGCTGCAGGCCCGGCAGTCTGAAGACCACCCTCATCGCCGGCGTCGGCGGGGCTTGGAGTGTGATGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp GAGCGCTCGCGCACCAGCCAACTGCCCCCTTCTGAGTaGGGAGCGCGGTCCTCCAGCGACTGCACTAGCAAA +
Preference number: 6 (lower is better)
Translates to: ERSRTSQLPPSE*GARSSSDCTSK
Trigger: TTTGCTAGTGCAGTCGCTGGAGGACCGCGCTCCGCACTCAGAAGGGGGCAGTTGGCTGGTGCGCGAGCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS GCA 72 bp AGCCCACTTCCTCGGCCTCTTCCCCTGTGTCCAAGCTaGCCTGCGGGTGCTTCTGCTGCTGGAAGAGGCGGA +
Preference number: 6 (lower is better)
Translates to: SPLPRPLPLCPS*PAGASAAGRGG
Trigger: TCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAGCTTGGACACAGGGGAAGAGGCCGAGGAAGTGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp CCCCCTTCTGAGTGCGGAGCGCGGTCCTCCAGCGACTaGACTAGCAAAGTGGCCCGCTGCCACCGCGTTATT +
Preference number: 6 (lower is better)
Translates to: PPSECGARSSSD*TSKVARCHRVI
Trigger: AATAACGCGGTGGCAGCGGGCCACTTTGCTAGTGCAGTCGCTGGAGGACCGCGCTCCGCACTCAGAAGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS CCA 72 bp CTCCACCATCTCTGGCTGAGAGTTGGGTACATCCTTTaGGAGGGCGGCCAGCGCACAGGACGGACAGTCGGG +
Preference number: 6 (lower is better)
Translates to: LHHLWLRVGYIL*EGGQRTGRTVG
Trigger: CCCGACTGTCCGTCCTGTGCGCTGGCCGCCCTCCCAAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS CAA 72 bp CCTCCACCATCTCTGGCTGAGAGTTGGGTACATCCTTaGGGAGGGCGGCCAGCGCACAGGACGGACAGTCGG +
Preference number: 6 (lower is better)
Translates to: PPPSLAESWVHP*GGRPAHRTDSR
Trigger: CCGACTGTCCGTCCTGTGCGCTGGCCGCCCTCCCAAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS CAA 90 bp CTCTCCTGGCACTGCTCACAGGCAATCCGAACGTCCAGGGAGCTCTaGCCCTGGTCCAGCAACCGCTGGATGCTGCTGGAGACAGGGAAG +
Preference number: 6 (lower is better)
Translates to: LSWHCSQAIRTSREL*PWSSNRWMLLETGK
Trigger: CTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTGCCAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp CCAGGGAGCTCTTGCCCTGGTCCAGCAACCGCTGGATaGTGCTGGAGACAGGGAAGACATGCCAGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: PGSSCPGPATAG*CWRQGRHARCS
Trigger: AGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp CCCAGGAGAACCAAGCTGGCGCCACTCTCCTGGCACTaGTCACAGGCAATCCGAACGTCCAGGGAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: PRRTKLAPLSWH*SQAIRTSRELL
Trigger: CAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 72 bp ACGTCCAGGGAGCTCTTGCCCTGGTCCAGCAACCGCTaGATGCTGCTGGAGACAGGGAAGACATGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: TSRELLPWSSNR*MLLETGKTCQV
Trigger: CACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 72 bp TCACAGGCAATCCGAACGTCCAGGGAGCTCTTGCCCTaGTCCAGCAACCGCTGGATGCTGCTGGAGACAGGG +
Preference number: 6 (lower is better)
Translates to: SQAIRTSRELLP*SSNRWMLLETG
Trigger: CCCTGTCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 72 bp TCCTCTTCATGGTATTGGCACTTGAGCAGCACCTGCTaGCAGCTTCCAGGGATCACGCCGGAACGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: SSSWYWHLSSTC*QLPGITPERGR
Trigger: GCGGCCGCGTTCCGGCGTGATCCCTGGAAGCTGCCAGCAGGTGCTGCTCAAGTGCCAATACCATGAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS CAA 72 bp CACTGCTCACAGGCAATCCGAACGTCCAGGGAGCTCTaGCCCTGGTCCAGCAACCGCTGGATGCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: HCSQAIRTSREL*PWSSNRWMLLE
Trigger: CTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp TCTTCCCCTGTGTCCAAGCTGCCCTGCGGGTGCTTCTaGTGCTGGAAGAGGCGGATGGTGACTTTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: SSPVSKLPCGCF*CWKRRMVTLVL
Trigger: CAGGACCAAAGTCACCATCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAGCTTGGACACAGGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp ACTGCTCACAGGCAATCCGAACGTCCAGGGAGCTCTTaGCCTGGTCCAGCAACCGCTGGATGCTGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: TAHRQSERPGSS*PGPATAGCCWR
Trigger: TCTCCAGCAGCATCCAGCGGTTGCTGGACCAGGGCAAGAGCTCCCTGGACGTTCGGATTGCCTGTGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CAA 90 bp CTGCCCTGCGGGTGCTTCTGCTGCTGGAAGAGGCGGATGGTGACTTaGGTCCTGGTCCTGTTGGCCTTGGGGACTTTTAGGAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: LPCGCFCCWKRRMVT*VLVLLALGTFRKSQ
Trigger: CTGGCTCTTCCTAAAAGTCCCCAAGGCCAACAGGACCAGGACCAAAGTCACCATCCGCCTCTTCCAGCAGCAGAAGCACCCGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS TCA 72 bp ACCCGTTCTCCCCGACTTTGCCCACATGAAGCTTTCTaGTCGCGTTCAGAAGCGCCGCCTTGGGTACCGGCT +
Preference number: 6 (lower is better)
Translates to: TRSPRLCPHEAF*SRSEAPPWVPA
Trigger: AGCCGGTACCCAAGGCGGCGCTTCTGAACGCGATCAGAAAGCTTCATGTGGGCAAAGTCGGGGAGAACGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS CCA 72 bp CTGATCGCGTTCAGAAGCGCCGCCTTGGGTACCGGCTaGGTGACATCGGGTCTCTTCTTCAAGTGCAGCATG +
Preference number: 6 (lower is better)
Translates to: LIAFRSAALGTG*VTSGLFFKCSM
Trigger: CATGCTGCACTTGAAGAAGAGACCCGATGTCACCCAGCCGGTACCCAAGGCGGCGCTTCTGAACGCGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS TCA 72 bp CGCTGCCACCGCGTTATTCACCTAGTGGAGGCGGCCTaGTTTACTGGCGACTTCACAAACCCAACTCCACGC +
Preference number: 6 (lower is better)
Translates to: RCHRVIHLVEAA*FTGDFTNPTPR
Trigger: GCGTGGAGTTGGGTTTGTGAAGTCGCCAGTAAATCAGGCCGCCTCCACTAGGTGAATAACGCGGTGGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS GCA 72 bp GGCGACTTCACAAACCCAACTCCACGCTGGAGCATTTaGATGGCTCTGTTCTCGCCTCGAGGAGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: GDFTNPTPRWSI*MALFSPRGAAT
Trigger: AGTGGCTGCTCCTCGAGGCGAGAACAGAGCCATGCAAATGCTCCAGCGTGGAGTTGGGTTTGTGAAGTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS CAA 90 bp TTCTGCTGCTGGAAGAGGCGGATGGTGACTTTGGTCCTGGTCCTGTaGGCCTTGGGGACTTTTAGGAAGAGCCAGACTTCTGCACGCTCC +
Preference number: 6 (lower is better)
Translates to: FCCWKRRMVTLVLVL*ALGTFRKSQTSARS
Trigger: GGAGCGTGCAGAAGTCTGGCTCTTCCTAAAAGTCCCCAAGGCCAACAGGACCAGGACCAAAGTCACCATCCGCCTCTTCCAGCAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CAA 90 bp CCGCCCTTCTTTTTCCCTTCCCCCTCCTCTTCTTTCTTCTTCTTCTaGCCCAGGAGAACCAAGCTGGCGCCACTCTCCTGGCACTGCTCA +
Preference number: 6 (lower is better)
Translates to: PPFFFPSPSSSFFFF*PRRTKLAPLSWHCS
Trigger: TGAGCAGTGCCAGGAGAGTGGCGCCAGCTTGGTTCTCCTGGGCAAGAAGAAGAAGAAAGAAGAGGAGGGGGAAGGGAAAAAGAAGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS TCA 72 bp AAAATGTGCTTCTTGACGGCCTCCACCATCTCTGGCTaGGAGTTGGGTACATCCTTTGGGAGGGCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: KMCFLTASTISG*ELGTSFGRAAS
Trigger: GCTGGCCGCCCTCCCAAAGGATGTACCCAACTCTCAGCCAGAGATGGTGGAGGCCGTCAAGAAGCACATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS TCA 72 bp TCGCGTTCAGAAGCGCCGCCTTGGGTACCGGCTGGGTaGCATCGGGTCTCTTCTTCAAGTGCAGCATGTTTA +
Preference number: 6 (lower is better)
Translates to: SRSEAPPWVPAG*HRVSSSSAACL
Trigger: TAAACATGCTGCACTTGAAGAAGAGACCCGATGTCACCCAGCCGGTACCCAAGGCGGCGCTTCTGAACGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS TCA 72 bp GATGAGGGTGGTCTTCAGACTGCCGGGCCTGCAGCATaGGGAAAGGTCTGTGCGACTGCTCCTTTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: DEGGLQTAGPAA*GKVCATAPFPH
Trigger: ATGAGGAAAAGGAGCAGTCGCACAGACCTTTCCTCATGCTGCAGGCCCGGCAGTCTGAAGACCACCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp GCCAGACTTCTGCACGCTCCACCACTGACAGGTCACTaGCTTCCTTGGAAATCTCGAAGTGCAGCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: ARLLHAPPLTGH*LPWKSRSAASS
Trigger: GGAAGACGCTGCACTTCGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTGGTGGAGCGTGCAGAAGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CCA 72 bp ACTTCACAAACCCAACTCCACGCTGGAGCATTTGCATaGCTCTGTTCTCGCCTCGAGGAGCAGCCACTAGCG +
Preference number: 6 (lower is better)
Translates to: TSQTQLHAGAFA*LCSRLEEQPLA
Trigger: CGCTAGTGGCTGCTCCTCGAGGCGAGAACAGAGCCATGCAAATGCTCCAGCGTGGAGTTGGGTTTGTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS TCA 72 bp ATCTCCACATACCCGTTCTCCCCGACTTTGCCCACATaGAGCTTTCTGATCGCGTTCAGAAGCGCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: ISTYPFSPTLPT*SFLIAFRSAAL
Trigger: CAAGGCGGCGCTTCTGAACGCGATCAGAAAGCTTCATGTGGGCAAAGTCGGGGAGAACGGGTATGTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS TCA 72 bp CTCTTGCCCAGTCCTGTTCTCTGGGGTCTAAGGCCTTaGGAATTCCACCCCCTTTCTCAACTGCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LLPSPVLWGLRP*EFHPLSQLQAV
Trigger: CACTGCCTGCAGTTGAGAAAGGGGGTGGAATTCTCAAGGCCTTAGACCCCAGAGAACAGGACTGGGCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 72 bp CTGGGACTTTGGGCTCTGTACATGCTGTTCCTCCCTTaGATGTCAGCTCTTGCCCAGTCCTGTTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: LGLWALYMLFLP*MSALAQSCSLG
Trigger: CCCCAGAGAACAGGACTGGGCAAGAGCTGACATTCAAGGGAGGAACAGCATGTACAGAGCCCAAAGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 72 bp ACACTTGAGCCAGCCTCTTCTTCCCTTGTCACAGCCTaGTTCCTCCGCCATCACCTCTTTGCTGGGTCACTG +
Preference number: 6 (lower is better)
Translates to: TLEPASSSLVTA*FLRHHLFAGSL
Trigger: CAGTGACCCAGCAAAGAGGTGATGGCGGAGGAATCAGGCTGTGACAAGGGAAGAAGAGGCTGGCTCAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp ATTCCACCCCCTTTCTCAACTGCAGGCAGTGACACCTaGTGTTCCTTCTGCCTTAAGTGCTCCTGCCCCAAC +
Preference number: 6 (lower is better)
Translates to: IPPPFSTAGSDT*CSFCLKCSCPN
Trigger: GTTGGGGCAGGAGCACTTAAGGCAGAAGGAACAGCAGGTGTCACTGCCTGCAGTTGAGAAAGGGGGTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp AGCGTCTTCCTGGCTGTTCCTCGCTGTGTAAGTCTGTaGAGTCGAGACACACTTGAGCCAGCCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SVFLAVPRCVSL*SRDTLEPASSS
Trigger: GGAAGAAGAGGCTGGCTCAAGTGTGTCTCGACTGCACAGACTTACACAGCGAGGAACAGCCAGGAAGACGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CCA 72 bp CCGCGTTATTCACCTAGTGGAGGCGGCCTGATTTACTaGCGACTTCACAAACCCAACTCCACGCTGGAGCAT +
Preference number: 6 (lower is better)
Translates to: PRYSPSGGGLIY*RLHKPNSTLEH
Trigger: ATGCTCCAGCGTGGAGTTGGGTTTGTGAAGTCGCCAGTAAATCAGGCCGCCTCCACTAGGTGAATAACGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS CAA 72 bp CTGACAAAGAACTGTTTCTTACAGCAGATGTTGACCTaGCCATCACACTCCAAGCCCCGCCGACGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: LTKNCFLQQMLT*PSHSKPRRRRR
Trigger: TCGCCGGCGTCGGCGGGGCTTGGAGTGTGATGGCAAGGTCAACATCTGCTGTAAGAAACAGTTCTTTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CAA 72 bp GCTGGGACTTTGGGCTCTGTACATGCTGTTCCTCCCTaGAATGTCAGCTCTTGCCCAGTCCTGTTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: AGTLGSVHAVPP*NVSSCPVLFSG
Trigger: CCCAGAGAACAGGACTGGGCAAGAGCTGACATTCAAGGGAGGAACAGCATGTACAGAGCCCAAAGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 72 bp GTCTTCAGTGAGATGTGTGCCACTGTCACCTATGGCTaGAGCTGTTCCTTCCTTGAGCAGCACCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: VFSEMCATVTYG*SCSFLEQHLLA
Trigger: TGCCAGCAGGTGCTGCTCAAGGAAGGAACAGCTTCAGCCATAGGTGACAGTGGCACACATCTCACTGAAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416150.1
CDS GCA 72 bp GCTGGATGCTGCTGGAGACAGGGAAGACATGCCAGGTaGTCTTCCGAGCGTCTACTACTTTTTCAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: AGCCWRQGRHAR*SSERLLLFQRA
Trigger: TGCTCTCTGAAAAAGTAGTAGACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS GCA 72 bp AGCAACCGCTGGATGCTGCTGGAGACAGGGAAGACATaGCAGGTGCTCTTCCGAGCGTCTACTACTTTTTCA +
Preference number: 6 (lower is better)
Translates to: SNRWMLLETGKT*QVLFRASTTFS
Trigger: TGAAAAAGTAGTAGACGCTCGGAAGAGCACCTGGCATGTCTTCCCTGTCTCCAGCAGCATCCAGCGGTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS CAA 72 bp TGGAAGAGGCGGATGGTGACTTTGGTCCTGGTCCTGTaGGCCTTGGGGACTTTTAGGAAGAGCCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: WKRRMVTLVLVL*ALGTFRKSQTS
Trigger: AGAAGTCTGGCTCTTCCTAAAAGTCCCCAAGGCCAACAGGACCAGGACCAAAGTCACCATCCGCCTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
ENST00000638023.1
CDS TCA 72 bp TCCTCGCTGTGTAAGTCTGTGCAGTCGAGACACACTTaGGCCAGCCTCTTCTTCCCTTGTCACAGCCTGATT +
Preference number: 6 (lower is better)
Translates to: SSLCKSVQSRHT*ASLFFPCHSLI
Trigger: AATCAGGCTGTGACAAGGGAAGAAGAGGCTGGCTCAAGTGTGTCTCGACTGCACAGACTTACACAGCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 72 bp CCAAGCCGGTCTAAGCGGCAGCCTCTATTTTTACCCTaGGCACCAGCAAGGGCAACTTCTTTTAAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PSRSKRQPLFLP*APARATSFKSS
Trigger: GCTGCTCTTAAAAGAAGTTGCCCTTGCTGGTGCTCAGGGTAAAAATAGAGGCTGCCGCTTAGACCGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638023.1
CDS GCA 72 bp TGGGGTGGGGGAACTCCTCACTATAATCCAGCAACTTaGCAACAGAAATCCTCTCAGCCAAAGCAAGGGCAT +
Preference number: 6 (lower is better)
Translates to: WGGGTPHYNPAT*QQKSSQPKQGH
Trigger: ATGCCCTTGCTTTGGCTGAGAGGATTTCTGTTGGCAAGTTGCTGGATTATAGTGAGGAGTTCCCCCACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000638023.1
CDS GCA 72 bp TTCTTCATTTTGCCACTGTCTTCTCTGGACAACTCTTaGTCCCTTTCCCCCTGGGCTGGGCAACTCTATGAG +
Preference number: 6 (lower is better)
Translates to: FFILPLSSLDNS*SLSPWAGQLYE
Trigger: CTCATAGAGTTGCCCAGCCCAGGGGGAAAGGGAGCAAGAGTTGTCCAGAGAAGACAGTGGCAAAATGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242208.5
ENST00000442711.1
ENST00000464515.1
CDS GCA 72 bp CCTTGTCACAGCCTGATTCCTCCGCCATCACCTCTTTaGTGGGTCACTGCAGCAGCATTTTCTTTACTTTGC +
Preference number: 6 (lower is better)
Translates to: PCHSLIPPPSPL*WVTAAAFSLLC
Trigger: GCAAAGTAAAGAAAATGCTGCTGCAGTGACCCAGCAAAGAGGTGATGGCGGAGGAATCAGGCTGTGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CCA 72 bp TGTCACAGCCTGATTCCTCCGCCATCACCTCTTTGCTaGGTCACTGCAGCAGCATTTTCTTTACTTTGCCTC +
Preference number: 6 (lower is better)
Translates to: CHSLIPPPSPLC*VTAAAFSLLCL
Trigger: GAGGCAAAGTAAAGAAAATGCTGCTGCAGTGACCCAGCAAAGAGGTGATGGCGGAGGAATCAGGCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 72 bp CCCTTGTCACAGCCTGATTCCTCCGCCATCACCTCTTaGCTGGGTCACTGCAGCAGCATTTTCTTTACTTTG +
Preference number: 6 (lower is better)
Translates to: PLSQPDSSAITS*LGHCSSIFFTL
Trigger: CAAAGTAAAGAAAATGCTGCTGCAGTGACCCAGCAAAGAGGTGATGGCGGAGGAATCAGGCTGTGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp TGGGTCACTGCAGCAGCATTTTCTTTACTTTGCCTCTaGAACACTAAGGAAGGCCTCCTCTCCAGTCATTTC +
Preference number: 6 (lower is better)
Translates to: WVTAAAFSLLCL*NTKEGLLSSHF
Trigger: GAAATGACTGGAGAGGAGGCCTTCCTTAGTGTTGCAGAGGCAAAGTAAAGAAAATGCTGCTGCAGTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp GGGTTCAGAACTAAGAGTCTGAGGCTCCTATCCTTTTaGTCGTTACAACTGGGAAGCTGCAACCCATATCAT +
Preference number: 6 (lower is better)
Translates to: GFRTKSLRLLSF*SLQLGSCNPYH
Trigger: ATGATATGGGTTGCAGCTTCCCAGTTGTAACGAGCAAAAGGATAGGAGCCTCAGACTCTTAGTTCTGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416150.1
CDS GCA 72 bp TCTGGGAACAATCTTCAAGAAGTTCATCTTAGAACTTaGAACTCCCTGGGAGGATCTCCCTGCCTGGATTTC +
Preference number: 6 (lower is better)
Translates to: SGNNLQEVHLRT*NSLGGSPCLDF
Trigger: GAAATCCAGGCAGGGAGATCCTCCCAGGGAGTTGCAAGTTCTAAGATGAACTTCTTGAAGATTGTTCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp CTCTTTTCCATGACCGTGGACCTCCTTACAACTGTCTaGTGTACATGTATCCCATGCACAAATCTGGGAACA +
Preference number: 6 (lower is better)
Translates to: LFSMTVDLLTTV*CTCIPCTNLGT
Trigger: TGTTCCCAGATTTGTGCATGGGATACATGTACAGCAGACAGTTGTAAGGAGGTCCACGGTCATGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 72 bp GCTAATGGACAGGAAATCCCCACATTGTCAGGGCAGTaGAATTTAGCAACCACTCAGTTCCAGCCTAACTCT +
Preference number: 6 (lower is better)
Translates to: ANGQEIPTLSGQ*NLATTQFQPNS
Trigger: AGAGTTAGGCTGGAACTGAGTGGTTGCTAAATTCAACTGCCCTGACAATGTGGGGATTTCCTGTCCATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CCA 72 bp TTAGAACTTGCAACTCCCTGGGAGGATCTCCCTGCCTaGATTTCTATAGTTAACGGAAATCCAGCCATACTT +
Preference number: 6 (lower is better)
Translates to: LELATPWEDLPA*ISIVNGNPAIL
Trigger: AAGTATGGCTGGATTTCCGTTAACTATAGAAATCCAGGCAGGGAGATCCTCCCAGGGAGTTGCAAGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 72 bp ATAGCAATCGCTGCTAATGGACAGGAAATCCCCACATaGTCAGGGCAGTTGAATTTAGCAACCACTCAGTTC +
Preference number: 6 (lower is better)
Translates to: IAIAANGQEIPT*SGQLNLATTQF
Trigger: GAACTGAGTGGTTGCTAAATTCAACTGCCCTGACAATGTGGGGATTTCCTGTCCATTAGCAGCGATTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 90 bp CACAGTTTCAAGTTCTCTGCAGCAGAAGGCAGGCTTTTCTGTGCATaGCGTACTGTGGATTCTGTTCTTAATTTAACACACTCTGCACAC +
Preference number: 6 (lower is better)
Translates to: HSFKFSAAEGRLFCA*RTVDSVLNLTHSAH
Trigger: GTGTGCAGAGTGTGTTAAATTAAGAACAGAATCCACAGTACGCAATGCACAGAAAAGCCTGCCTTCTGCTGCAGAGAACTTGAAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 90 bp GCAATCGCTGCTAATGGACAGGAAATCCCCACATTGTCAGGGCAGTaGAATTTAGCAACCACTCAGTTCCAGCCTAACTCTAAAATTAGA +
Preference number: 6 (lower is better)
Translates to: AIAANGQEIPTLSGQ*NLATTQFQPNSKIR
Trigger: TCTAATTTTAGAGTTAGGCTGGAACTGAGTGGTTGCTAAATTCAACTGCCCTGACAATGTGGGGATTTCCTGTCCATTAGCAGCGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 90 bp ATATGTCAAATAGCAATCGCTGCTAATGGACAGGAAATCCCCACATaGTCAGGGCAGTTGAATTTAGCAACCACTCAGTTCCAGCCTAAC +
Preference number: 6 (lower is better)
Translates to: ICQIAIAANGQEIPT*SGQLNLATTQFQPN
Trigger: GTTAGGCTGGAACTGAGTGGTTGCTAAATTCAACTGCCCTGACAATGTGGGGATTTCCTGTCCATTAGCAGCGATTGCTATTTGACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 90 bp CCACCCTTAGTGCTGCCTTTAATAATGTTTCAATTTTCAGATTGTTaGGATGACAGTTCCTCTAGGAGGCTTACCTCACATCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: PPLVLPLIMFQFSDC*DDSSSRRLTSHHLH
Trigger: GTGGAGGTGATGTGAGGTAAGCCTCCTAGAGGAACTGTCATCCAAACAATCTGAAAATTGAAACATTATTAAAGGCAGCACTAAGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp GACCTCCTTACAACTGTCTGCTGTACATGTATCCCATaGACAAATCTGGGAACAATCTTCAAGAAGTTCATC +
Preference number: 6 (lower is better)
Translates to: DLLTTVCCTCIP*TNLGTIFKKFI
Trigger: GATGAACTTCTTGAAGATTGTTCCCAGATTTGTGCATGGGATACATGTACAGCAGACAGTTGTAAGGAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CCA 72 bp ATCTTCAAGAAGTTCATCTTAGAACTTGCAACTCCCTaGGAGGATCTCCCTGCCTGGATTTCTATAGTTAAC +
Preference number: 6 (lower is better)
Translates to: IFKKFILELATP*EDLPAWISIVN
Trigger: GTTAACTATAGAAATCCAGGCAGGGAGATCCTCCCAGGGAGTTGCAAGTTCTAAGATGAACTTCTTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS GCA 72 bp TCACTTCTTCTTGAAAGTCCTTTACTGAATTCCTATTaGTCAGTATCCAACAGAAAGTGGCTGGGACTTTGG +
Preference number: 6 (lower is better)
Translates to: SLLLESPLLNSY*SVSNRKWLGLW
Trigger: CCAAAGTCCCAGCCACTTTCTGTTGGATACTGAGCAATAGGAATTCAGTAAAGGACTTTCAAGAAGAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS TCA 72 bp TTTCCCACAGGTGGATCTGATCACATCACTTCTTCTTaGAAGTCCTTTACTGAATTCCTATTGCTCAGTATC +
Preference number: 6 (lower is better)
Translates to: FPTGGSDHITSS*KSFTEFLLLSI
Trigger: GATACTGAGCAATAGGAATTCAGTAAAGGACTTTCAAGAAGAAGTGATGTGATCAGATCCACCTGTGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464515.1
CDS CAA 72 bp GTGCTGCCTTTAATAATGTTTCAATTTTCAGATTGTTaGGATGACAGTTCCTCTAGGAGGCTTACCTCACAT +
Preference number: 6 (lower is better)
Translates to: VLPLIMFQFSDC*DDSSSRRLTSH
Trigger: ATGTGAGGTAAGCCTCCTAGAGGAACTGTCATCCAAACAATCTGAAAATTGAAACATTATTAAAGGCAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464515.1