RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ING5 (Homo sapiens)

Ensembl gene IDs: ENSG00000168395

Ensembl transcript IDs: ENST00000313552.11, ENST00000406941.5, ENST00000433036.1, ENST00000445620.5, ENST00000474238.1, ENST00000482774.5, ENST00000484145.1, ENST00000489509.1, ENST00000492488.5, ENST00000493261.5, ENST00000636051.1

Found 490 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCGCCCTCCGTaGACCAGGTTACCATGTCCCCGCCCGCACGCCCGGCCGGGCAGC +
Preference number: 1 (lower is better)
Translates to: WKTTGKLREGGGRPP*TRLPCPRPHARPGS
Trigger: GCTGCCCGGCCGGGCGTGCGGGCGGGGACATGGTAACCTGGTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 90 bp CTCAGGCAGCCACGTAGGCCTCCGCACGGCGTCCCTGGCCAACAGTaGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACG +
Preference number: 1 (lower is better)
Translates to: LRQPRRPPHGVPGQQ*SHVHPPRGPVQHET
Trigger: CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCCAGGGACGCCGTGCGGAGGCCTACGTGGCTGCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 90 bp GAGGGAGCGCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTaGGGGAGGCAACCAGGAGGCCATGGGGAGCCCTGTCCCTTGCAC +
Preference number: 1 (lower is better)
Translates to: EGAPWRVARECCYQP*GRQPGGHGEPCPLH
Trigger: GTGCAAGGGACAGGGCTCCCCATGGCCTCCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGCGCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp GACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCCAGATTTaGTGGCTGTGGGAGAGGGCCGGGGGCCTGAGGGGACCGCCCAGC +
Preference number: 1 (lower is better)
Translates to: DLCLSITRFEGAGQI*WLWERAGGLRGPPS
Trigger: GCTGGGCGGTCCCCTCAGGCCCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp AGCCCTGAGGGAGGCAACCAGGAGGCCATGGGGAGCCCTGTCCCTTaGACAGGCCAGGGTGACCCCAACTGTCAGCGGCTGCTGACTCCC +
Preference number: 1 (lower is better)
Translates to: SPEGGNQEAMGSPVP*TGQGDPNCQRLLTP
Trigger: GGGAGTCAGCAGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTCCTGGTTGCCTCCCTCAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp GCCGATTCCGGGATGCCACCTGTGGCTTCACCTCCAAGGGGCTCCTaGGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGCAGC +
Preference number: 1 (lower is better)
Translates to: ADSGMPPVASPPRGS*GLLESPLTRGEQGS
Trigger: GCTGCCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGGTGAAGCCACAGGTGGCATCCCGGAATCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp AAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCTCAGTCTCGCCTaGGGGAGCGCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCC +
Preference number: 1 (lower is better)
Translates to: KLRPPCRPHWPLSLA*GSAMACGQGVLLSA
Trigger: GGCTGATAGCAGCACTCCCTGGCCACACGCCATGGCGCTCCCTCAGGCGAGACTGAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp CTGGCACCACAGCGTGACCACGAGGGGCGTGAATACCCACTGTGCTaGTGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGC +
Preference number: 1 (lower is better)
Translates to: LAPQRDHEGREYPLC*WVRDAHHRTPEPRG
Trigger: GCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAGCACAGTGGGTATTCACGCCCCTCGTGGTCACGCTGTGGTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp CAACCAGGAGGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTaGCCCCAACTGTCAGCGGCTGCTGACTCCCTTCAGCACCACTGC +
Preference number: 1 (lower is better)
Translates to: QPGGHGEPCPLHRPG*PQLSAAADSLQHHC
Trigger: GCAGTGGTGCTGAAGGGAGTCAGCAGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTCCTGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 90 bp CTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTaGCGGCCGCCCTCCGTGGACCAGGTTACCATGTCCCCGCCCGCA +
Preference number: 1 (lower is better)
Translates to: LYRTVLENHRKATRG*RPPSVDQVTMSPPA
Trigger: TGCGGGCGGGGACATGGTAACCTGGTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 90 bp ACACACACTCGGGCTCAGCATGCACCCGGCCTCCCCGCTGCCCTCTaGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTG +
Preference number: 1 (lower is better)
Translates to: THTRAQHAPGLPAAL*HRGAHLSLSFAGNL
Trigger: CAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAGGGCAGCGGGGAGGCCGGGTGCATGCTGAGCCCGAGTGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp GGGGCTGGCTGCCTGTCCAAGCCCCGGGATTCCAGGTGCTACAGGTaGCACTGCCCTTCATCCACACACACAGGTTCTGCCTCGCCAGAG +
Preference number: 1 (lower is better)
Translates to: GAGCLSKPRDSRCYR*HCPSSTHTGSASPE
Trigger: CTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGGGCAGTGTCACCTGTAGCACCTGGAATCCCGGGGCTTGGACAGGCAGCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp AGAGAAACGGAGCATCAGCCCAGCTGTCGCACAGGGTCTCGCGGGTaGTGGTCACGGGACCTGCGGCCACTCCAAGCTAATGAAGAGCCG +
Preference number: 1 (lower is better)
Translates to: RETEHQPSCRTGSRG*WSRDLRPLQANEEP
Trigger: CGGCTCTTCATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGCACCCGCGAGACCCTGTGCGACAGCTGGGCTGATGCTCCGTTTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 90 bp CTCCTTCCTCTAAAGGCACGGGAGAGGATTTCCGAGCGCCTGCGATaGTGTGGGGAACCGCAGGCTGGGCACCGTCACCAACGCGTCACA +
Preference number: 1 (lower is better)
Translates to: LLPLKARERISERLR*CGEPQAGHRHQRVT
Trigger: TGTGACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCTTTAGAGGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 90 bp ACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGCAACAGTaGAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGA +
Preference number: 1 (lower is better)
Translates to: TQVLPRQSKATGQQQ*RGQPQVTGSQTRHG
Trigger: TCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTGTTGCTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 90 bp AAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATGCCACCTGTaGCTTCACCTCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTC +
Preference number: 1 (lower is better)
Translates to: KGLRLSLLPIPGCHL*LHLQGAPAVSSSHL
Trigger: GAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGGTGAAGCCACAGGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp CTGTCCCTTGCACAGGCCAGGGTGACCCCAACTGTCAGCGGCTGCTaGCTCCCTTCAGCACCACTGCCACAAGAGGCACCCTCTGTGCTA +
Preference number: 1 (lower is better)
Translates to: LSLAQARVTPTVSGC*LPSAPLPQEAPSVL
Trigger: TAGCACAGAGGGTGCCTCTTGTGGCAGTGGTGCTGAAGGGAGTCAGCAGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 90 bp GAAACGGAGCATCAGCCCAGCTGTCGCACAGGGTCTCGCGGGTGCTaGTCACGGGACCTGCGGCCACTCCAAGCTAATGAAGAGCCGTTT +
Preference number: 1 (lower is better)
Translates to: ETEHQPSCRTGSRGC*SRDLRPLQANEEPF
Trigger: AAACGGCTCTTCATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGCACCCGCGAGACCCTGTGCGACAGCTGGGCTGATGCTCCGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 90 bp TCCTCTAAAGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTaGGGAACCGCAGGCTGGGCACCGTCACCAACGCGTCACAACAGA +
Preference number: 1 (lower is better)
Translates to: SSKGTGEDFRAPAML*GTAGWAPSPTRHNR
Trigger: TCTGTTGTGACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCTTTAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 90 bp GGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTGTaGAGTCTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTG +
Preference number: 1 (lower is better)
Translates to: GSLRSRDLRRDTEHL*SLGTLHSRKSPGHV
Trigger: CACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAGACTGCACAGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTaGGCCGAGTCCAATTCTGTCCACAAAGCCCGACCTGACATCTTG +
Preference number: 1 (lower is better)
Translates to: PSAANRPRNADALLF*AESNSVHKARPDIL
Trigger: CAAGATGTCAGGTCGGGCTTTGTGGACAGAATTGGACTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 90 bp GGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTaGGCACCGTCACCAACGCGTCACAACAGAGCAAATCTGCATAGC +
Preference number: 1 (lower is better)
Translates to: GEDFRAPAMLWGTAG*APSPTRHNRANLHS
Trigger: GCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 90 bp CCGCAGGCTGGGCACCGTCACCAACGCGTCACAACAGAGCAAATCTaGATAGCCTTCCCCAACTACCACCGAAAGGATGGCTCCGGCTCA +
Preference number: 1 (lower is better)
Translates to: PQAGHRHQRVTTEQI*IAFPNYHRKDGSGS
Trigger: TGAGCCGGAGCCATCCTTTCGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGACGGTGCCCAGCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 90 bp GCCGAGTCCAATTCTGTCCACAAAGCCCGACCTGACATCTTGAGCTaGCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTG +
Preference number: 1 (lower is better)
Translates to: AESNSVHKARPDILS*HLTCVSASPGSRAL
Trigger: CAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGAATTGGACTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 90 bp CCTCCTCTTCTGCGCCGAGTCCAATTCTGTCCACAAAGCCCGACCTaGCATCTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGG +
Preference number: 1 (lower is better)
Translates to: PPLLRRVQFCPQSPT*HLELPLDLCLSITR
Trigger: CCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGAATTGGACTCGGCGCAGAAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp ACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTaGGGGCCTGGGAATGCACAGCACAGGCAGAAGCATTCGTGGTTC +
Preference number: 1 (lower is better)
Translates to: TNSQQIHIGVPSTGS*GPGNAQHRQKHSWF
Trigger: GAACCACGAATGCTTCTGCCTGTGCTGTGCATTCCCAGGCCCGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 90 bp GACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATaGATGTGGACACCATCCCAACCAGGACTGTTCAGGGTGTTCTTG +
Preference number: 1 (lower is better)
Translates to: DRWPRGIRVFKNRRT*MWTPSQPGLFRVFL
Trigger: CAAGAACACCCTGAACAGTCCTGGTTGGGATGGTGTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 90 bp ACTGCTTTCAAGCAACAGTCTCAAGTAGTCTTCGGGTCTCTCCTCTaGCAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTC +
Preference number: 1 (lower is better)
Translates to: TAFKQQSQVVFGSLL*QQHARVYVSASCRF
Trigger: GAATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGACCCGAAGACTACTTGAGACTGTTGCTTGAAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp GATGCAGAGGGCTCGGTTTCACCAGCTCCTGTTTTCACTGCAGCCTaGCTTCCCCTACAGGATTTCCTCAGATCACTGACTGATACCGCA +
Preference number: 1 (lower is better)
Translates to: DAEGSVSPAPVFTAA*LPLQDFLRSLTDTA
Trigger: TGCGGTATCAGTCAGTGATCTGAGGAAATCCTGTAGGGGAAGGCAGGCTGCAGTGAAAACAGGAGCTGGTGAAACCGAGCCCTCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 90 bp GAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACACTaGTTTCAAGCAACAGTCTCAAGTAGTCTTCGGGTCTCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: EIHQRHKSRSRCCRH*FQATVSSSLRVSPL
Trigger: CAGAGGAGAGACCCGAAGACTACTTGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp TTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTaGCGACACTGCTTTCAAGCAACAGTCTCAAGTAGTCTTCGGGTC +
Preference number: 1 (lower is better)
Translates to: FRAEIHQRHKSRSRC*RHCFQATVSSSLRV
Trigger: GACCCGAAGACTACTTGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 90 bp CTCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTaGTGCCGACACTGCTTTCAAGCAACAGTCTCAAGTAGTCTTCGG +
Preference number: 1 (lower is better)
Translates to: LFRAEIHQRHKSRSR*CRHCFQATVSSSLR
Trigger: CCGAAGACTACTTGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTACAGGGTCTCGCGGGTaGTGGTCACGGGACCTGCGG +
Preference number: 2 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPTGSRG*WSRDLR
Trigger: CCGCAGGTCCCGTGACCAGCACCCGCGAGACCCTGT...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp GAGGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTGACCCCAACTGTCAGCCCCTCGCCAGACGGTaGCAGCGAGCCCTTCCGCGC +
Preference number: 2 (lower is better)
Translates to: EAMGSPVPCTGQGDPNCQPLARR*QRALPR
Trigger: GCGCGGAAGGGCTCGCTGGCACCGTCTGGCGAGGGG...CTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp CCGCCCAGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCCCAGCACTCCACGTaGCTCCTAGCAGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PPSKGTPEAEATVQASLASQHST*LLAGGW
Trigger: CCAGCCCCCTGCTAGGAGCCACGTGGAGTGCTGGGA...GGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCTGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGGGGAGCCCTGTCCCTTaGACAGGCCAGGGTGACCCC +
Preference number: 2 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGGSPVP*TGQGDP
Trigger: GGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCC...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp CAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATGCCACCGGGCACCCCAGAAGCTaGGGCCACCGTGCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: QQHARVYVSASCRFRDATGHPRS*GHRAGL
Trigger: GAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCC...GGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp AGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGGGCGGCCGCCCTCCGTaGACCAGGTTACCATGTCCC +
Preference number: 2 (lower is better)
Translates to: RHGRGFPSACDAVGNRRLGGRPP*TRLPCP
Trigger: GGGACATGGTAACCTGGTCCACGGAGGGCGGCCGCC...CAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGGCGCCTGCGATGCTGTaGGGAACCGCAGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETAPAML*GTAGWA
Trigger: TGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGC...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGTCCACAGGGACAGGATaGTGCGTGCGCCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGSTGTG*CVRLGP
Trigger: GGGACCCAGGCGCACGCACCATCCTGTCCCTGTGGA...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp GAGGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTGACCCCAACTGTCAGACAGGGACAGGATGGTaGGTGCGCCTGGGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: EAMGSPVPCTGQGDPNCQTGTGW*VRLGPQ
Trigger: CTGGGGACCCAGGCGCACGCACCATCCTGTCCCTGT...CTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCGACGAGCAGCAGCAGTaGCCGACCGCCCGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLDEQQQ*PTARLH
Trigger: GTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTC...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp CCGGGCACGTGGGGAACAGGCCTGAAGAGGGCAGTCCACAGGGACAGGATGGTGTGCACACACCCAGGATaGTGCCCTTGGAGGCACCCG +
Preference number: 2 (lower is better)
Translates to: PGTWGTGLKRAVHRDRMVCTHPG*CPWRHP
Trigger: CGGGTGCCTCCAAGGGCATCATCCTGGGTGTGTGCA...CACCATCCTGTCCCTGTGGACTGCCCTCTTCAGGCCTGTTCCCCACGTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGGAATACCCACTGTGCTaGTGGGTCAGGGACGCGCAC +
Preference number: 2 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGEYPLC*WVRDAH
Trigger: GTGCGCGTCCCTGACCCATCAGCACAGTGGGTATTC...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp AGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCTCAGTTGCACAGGCCAGGGTaGCCCCAACTGTCAGCGGCT +
Preference number: 2 (lower is better)
Translates to: SKGTPEAEATVQASLASQLHRPG*PQLSAA
Trigger: AGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAA...CTGAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp GCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCAGGGCAGGGAACAGGACCTaGCTTGAGGCAGAGCGGCCT +
Preference number: 2 (lower is better)
Translates to: AMACGQGVLLSALREATRAGNRT*LEAERP
Trigger: AGGCCGCTCTGCCTCAAGGCAGGTCCTGTTCCCTGC...CCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTGGACAGGATGGTGCGTaGGCCTGGGTCCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASGQDGA*AWVPSR
Trigger: CCTGCTGGGGACCCAGGCGCACGCACCATCCTGTCC...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGGAGCGCCATGGCGTGTaGCCAGGGAGTGCTGCTATC +
Preference number: 2 (lower is better)
Translates to: SPGSRALARFDGCGRGPGERHGV*PGSAAI
Trigger: GATAGCAGCACTCCCTGGCCACACGCCATGGCGCTC...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACGCGCGGAGCCGAGTGTaGGGAGGGCAGCCGCCGCCA +
Preference number: 2 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDARSRV*GGQPPP
Trigger: TGGCGGCGGCTGCCCTCCTCACACTCGGCTCCGCGC...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp GCCCTTCATCCACACACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGGAACAGGACCTGCCTTaGGGCAGAGCGGCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: ALHPHTQVLPRQSKATGQEQDLP*GRAAWH
Trigger: GTGCCAGGCCGCTCTGCCTCAAGGCAGGTCCTGTTC...CTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp AGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCTCAGACTGTCAGCGGCTGCTaGCTCCCTTCAGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SKGTPEAEATVQASLASQTVSGC*LPSAPL
Trigger: CAGTGGTGCTGAAGGGAGTCAGCAGCCGCTGACAGT...CTGAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp GTCACGATCAGGGAAAGCCAAGGAGCAGAAGTCTGGGTCCCAGAGGGAATCAACAGAGGGCCGGGGGCCTaGGGGGACCGCCCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: VTIRESQGAEVWVPEGINRGPGA*GDRPAR
Trigger: CCTTGCTGGGCGGTCCCCTCAGGCCCCCGGCCCTCT...GTTGATTCCCTCTGGGACCCAGACTTCTGCTCCTTGGCTTTCCCTGATCGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAAAGCTACGCGAGGGTaGCGGCCGCCCTCCGTGGAC +
Preference number: 2 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRKATRG*RPPSVD
Trigger: GTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTT...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp TCCCAGCACTCTGGGAAGCCGAGGCGGGCAAATCGTGAGGTCAGGAGATCGAGATGGGGAACCGCAGGCTaGGCACCGTCACCAACGCGT +
Preference number: 2 (lower is better)
Translates to: SQHSGKPRRANREVRRSRWGTAG*APSPTR
Trigger: ACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCA...TCTCGATCTCCTGACCTCACGATTTGCCCGCCTCGGCTTCCCAGAGTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGTCGGAAAAGGACAGGTaGCCCAGAGGCATCCGTGTG +
Preference number: 2 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETSEKDR*PRGIRV
Trigger: CACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGA...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGCCTCAATCCAAGAGATaGGTCTGGGGCCGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRPQSKR*VWGRAA
Trigger: AGCTGCCCGGCCCCAGACCCATCTCTTGGATTGAGG...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGCCAGGCCAGGGGCCATaGCCTTCTTTTCTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRPGQGP*PSFLAK
Trigger: TTTGGCCAGAAAAGAAGGTCATGGCCCCTGGCCTGG...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCTCCGAGCGCCTGCGATaGTGTGGGGAACCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSSERLR*CGEPQA
Trigger: AGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGA...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTTGTACCGGACAGTCCTaGAAAACCACAGGAAAGCTA +
Preference number: 2 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPCTGQS*KTTGKL
Trigger: TAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACA...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCCGGGAGCTGCGGGCCTaGGAATGCACAGCACAGGCA +
Preference number: 2 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRRELRA*ECTAQA
Trigger: TGCCTGTGCTGTGCATTCCCAGGCCCGCAGCTCCCG...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp AGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGAAGGTCGCCCTTCTGTaGGAACAGGCTTTGGTGGTT +
Preference number: 2 (lower is better)
Translates to: RHGRGFPSACDAVGNRRLKVALL*EQALVV
Trigger: AACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT...CAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp TCCCAGCACTCTGGGAAGCCGAGGCGGGCAAATCGTGAGGTCAGGAGATCGAGACTGCGGGCCTGGGAATaGACAGCACAGGCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: SQHSGKPRRANREVRRSRLRAWE*TAQAEA
Trigger: TGCTTCTGCCTGTGCTGTGCATTCCCAGGCCCGCAG...TCTCGATCTCCTGACCTCACGATTTGCCCGCCTCGGCTTCCCAGAGTGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCGGATTTCCGAGCGCCTaGGATGCTGTGGGGAACCGC +
Preference number: 2 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRGFPSA*DAVGNR
Trigger: GCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCC...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGGTAATCCCAGCACTCTaGGAAGCCGACGCAGGCGGA +
Preference number: 2 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQVIPAL*EADAGG
Trigger: TCCGCCTGCGTCGGCTTCCCAGAGTGCTGGGATTAC...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp CTCTGGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTGCTCTTCGATGGTGCGTGCGCCTaGGTCCCCAGCAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: LWHRGAHLSLSFAGNLLFDGACA*VPSREQ
Trigger: CTGTTCCCTGCTGGGGACCCAGGCGCACGCACCATC...GAAGAGCAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp GTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTGCAACCAGGAGGCCATaGGGAGCCCTGTCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: VSPLTAARKGLRLSLLPIATRRP*GALSLA
Trigger: TGCAAGGGACAGGGCTCCCCATGGCCTCCTGGTTGC...AATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCAATTCATCTCCCAGCTaGGCGCAGTGGCTGACACCT +
Preference number: 2 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLNSSPS*AQWLTP
Trigger: AGGTGTCAGCCACTGCGCTCAGCTGGGAGATGAATT...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp GTCACGATCAGGGAAAGCCAAGGAGCAGAAGTCTGGGTCCCAGAGGGAATCAACTGCTGCTATCAGCCCTaGGGGAGGCAACCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: VTIRESQGAEVWVPEGINCCYQP*GRQPGG
Trigger: GCCTCCTGGTTGCCTCCCTCAGGGCTGATAGCAGCA...GTTGATTCCCTCTGGGACCCAGACTTCTGCTCCTTGGCTTTCCCTGATCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCAGGGACAGATTAACTTaGTCCTCGGATCCGGGCACA +
Preference number: 2 (lower is better)
Translates to: AVPDSPGKPQESYARVAARDRLT*SSDPGT
Trigger: TGTGCCCGGATCCGAGGAGCAAGTTAATCTGTCCCT...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTGCTTCATTCCAGAACTaGTATTGTGGCACAACAAAT +
Preference number: 2 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPASFQN*YCGTTN
Trigger: ATTTGTTGTGCCACAATAGCAGTTCTGGAATGAAGC...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp AGTCTTCGGGTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCAGGTTCGAGGGCGCTaGCCAGATTTGATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SLRVSPLTAARKGLRLSLQVRGR*PDLMAV
Trigger: CACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTG...GAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGACCCGAAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CAA 90 bp GTGGACACCATCCCAACCAGGACTGTTCAGGGTGTTCTTGTTCTCTaGTTCTCACTCACTGACTACCAGCTTCTCGACGGGAGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: VDTIPTRTVQGVLVL*FSLTDYQLLDGRAP
Trigger: CGGGGCCCTCCCGTCGAGAAGCTGGTAGTCAGTGAGTGAGAACAAGAGAACAAGAACACCCTGAACAGTCCTGGTTGGGATGGTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATCGTTTACTCCGGAGGTaGGTCCCCGAGGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNRLLRR*VPEGGL
Trigger: CAGTCCTCCCTCGGGGACTCACCTCCGGAGTAAACG...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCCTTGTTCTCACTCACTaGCTACCAGCTTCTCGACGG +
Preference number: 2 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSLVLTH*LPASRR
Trigger: CCGTCGAGAAGCTGGTAGTCAGTGAGTGAGAACAAG...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGGCTGGTCACGGGACCTaGGGCCACTCCAAGCTAATG +
Preference number: 2 (lower is better)
Translates to: AQQIHNKFTSESPRPGAAAGHGT*GHSKLM
Trigger: CATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGC...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGACAACAGAGCAAATCTaGATAGCCTTCCCCAACTAC +
Preference number: 2 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRTTEQI*IAFPNY
Trigger: GTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGT...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp CCTTCATCCACACACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGCAGACACGGAGCATCTGTaGAGTCTAGGAACACTGCAT +
Preference number: 2 (lower is better)
Translates to: PSSTHTGSASPEQGHRAADTEHL*SLGTLH
Trigger: ATGCAGTGTTCCTAGACTGCACAGATGCTCCGTGTC...TGCTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp TCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACCTGCCGATTCCGGGATaGCACCTGTGGCTTCACCTC +
Preference number: 2 (lower is better)
Translates to: SLELKSISVTSPGPGAADLPIPG*HLWLHL
Trigger: GAGGTGAAGCCACAGGTGGCATCCCGGAATCGGCAG...GTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACCTACCACCGAAAGGATaGCTCCGGCTCAGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDLPPKG*LRLSLV
Trigger: CACCAAGCTGAGCCGGAGCCATCCTTTCGGTGGTAG...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGAATAAACATCTGTGTTaGCCGGGTGCGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQNKHLC*PGAVAH
Trigger: ATGAGCCACCGCACCCGGCCAACACAGATGTTTATT...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CAA 90 bp TTCTGCGCCGAGTCCAATTCTGTCCACAAAGCCCGACCTGACATCTaGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGG +
Preference number: 2 (lower is better)
Translates to: FCAESNSVHKARPDI*SCHLTCVSASPGSR
Trigger: CCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGAATTGGACTCGGCGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGCCAGAACTGCTATTGTaGCACAACAAATTCACAACA +
Preference number: 2 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETPELLL*HNKFTT
Trigger: TGTTGTGAATTTGTTGTGCCACAATAGCAGTTCTGG...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGTTCAGGCCCAGACACTaGCAGGGACGAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: STMYPPRSINICVGRVRWFRPRH*QGRAAA
Trigger: TGCTGCTGCTCGTCCCTGCCAGTGTCTGGGCCTGAA...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp TCTGTCCACAAAGCCCGACCTGACATCTTGAGCTGCCACTTGACCTGTGTCTCATCCAGGTGCTACAGGTaGCACTGCCCTTCATCCACA +
Preference number: 2 (lower is better)
Translates to: SVHKARPDILSCHLTCVSSRCYR*HCPSST
Trigger: TGTGGATGAAGGGCAGTGTCACCTGTAGCACCTGGA...TGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp TCACCAACGCGTCACAACAGAGCAAATCTGCATAGCCTTCCCCAACTACCACCGAGGCAGAAGCATTCGTaGTTCGTCAGCTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: SPTRHNRANLHSLPQLPPRQKHS*FVSSWQ
Trigger: CTGCCAGGAGCTGACGAACCACGAATGCTTCTGCCT...CGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCTCCGGCTCAGCTTGGTaGACGCTCATTAAACAAAAA +
Preference number: 2 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSSGSAW*TLIKQK
Trigger: TTTTTGTTTAATGAGCGTTCACCAAGCTGAGCCGGA...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp ACAACCCCAGCGCTTTCCAGGGGTAGCCACAGGTGTGAACAGCTCAAAGGTGGAAAGAACCGCAGAACATaGATGTGGACACCATCCCAA +
Preference number: 2 (lower is better)
Translates to: TTPALSRGSHRCEQLKGGKNRRT*MWTPSQ
Trigger: TTGGGATGGTGTCCACATTCATGTTCTGCGGTTCTT...TCCACCTTTGAGCTGTTCACACCTGTGGCTACCCCTGGAAAGCGCTGGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACAGAAACAGGCGTCCCTaGATTCCTCAGCAATCCTCT +
Preference number: 2 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDRNRRP*IPQQSS
Trigger: AGAGGATTGCTGAGGAATGCAGGGACGCCTGTTTCT...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGTGGTTCGTCAGCTCCTaGCAGACGGGACTCACTTCA +
Preference number: 2 (lower is better)
Translates to: STMYPPRSINICVGRVRWWFVSS*QTGLTS
Trigger: TGAAGTGAGTCCCGTCTGCCAGGAGCTGACGAACCA...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACAAGAGCCCCGGGCACGTaGGGAACAGGCCTGAAGAGG +
Preference number: 2 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTRAPGT*GTGLKR
Trigger: CCTCTTCAGGCCTGTTCCCCACGTGCCCGGGGCTCT...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR TCA 90 bp CACCCACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAATATTGCGACACGAATaGAGGGACAGATTAACTTGC +
Preference number: 2 (lower is better)
Translates to: HPHPRKRTGGPEASVCSRILRHE*RDRLTC
Trigger: GCAAGTTAATCTGTCCCTTCATTCGTGTCGCAATAT...TCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGACCGTGGCGAAGGGTGTaGAGCACTGTAGCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRPWRRV*STVACP
Trigger: AGGGCAGGCTACAGTGCTTCACACCCTTCGCCACGG...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACACAGGGCAGCACCCTCTaGTGCCAACCGTCCCCGAAA +
Preference number: 2 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTQGSTL*CQPSPK
Trigger: TTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTG...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp ACAACCCCAGCGCTTTCCAGGGGTAGCCACAGGTGTGAACAGCTCAAAGGTGGATCATTTCTGAAAAATTaGCAGGCGCTGTTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: TTPALSRGSHRCEQLKGGSFLKN*QALFQH
Trigger: GTGCTGAAACAGCGCCTGGCAATTTTTCAGAAATGA...TCCACCTTTGAGCTGTTCACACCTGTGGCTACCCCTGGAAAGCGCTGGGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp GTCACGATCAGGGAAAGCCAAGGAGCAGAAGTCTGGGTCCCAGAGGGAATCAACCCTTTGCAGGTAATCTaGTCTTCTGCTCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VTIRESQGAEVWVPEGINPLQVI*SSALSL
Trigger: GAGAGAAAGAGCAGAAGAGCAGATTACCTGCAAAGG...GTTGATTCCCTCTGGGACCCAGACTTCTGCTCCTTGGCTTTCCCTGATCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CCA 90 bp GGAATTGTCTCATTCTGCTCATGTTTTCTATGTTTCTTCCAAAACTCTATGCATGGGTCTCGCGGGTGCTaGTCACGGGACCTGCGGCCA +
Preference number: 2 (lower is better)
Translates to: GIVSFCSCFLCFFQNSMHGSRGC*SRDLRP
Trigger: TGGCCGCAGGTCCCGTGACCAGCACCCGCGAGACCC...ATGCATAGAGTTTTGGAAGAAACATAGAAAACATGAGCAGAATGAGACAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR GCA 90 bp GGAATTGTCTCATTCTGCTCATGTTTTCTATGTTTCTTCCAAAACTCTATGCATCCCTCGACCGGGAGCTaGGGGCCTGGGAATGCACAG +
Preference number: 2 (lower is better)
Translates to: GIVSFCSCFLCFFQNSMHPSTGS*GPGNAQ
Trigger: CTGTGCATTCCCAGGCCCGCAGCTCCCGGTCGAGGG...ATGCATAGAGTTTTGGAAGAAACATAGAAAACATGAGCAGAATGAGACAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CCA 90 bp ATAAACTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAACCTGAGGGAGCGCCATaGCGTGTGGCCAGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: INLQAAGTIDSVFPLVQKPEGAP*RVAREC
Trigger: GCACTCCCTGGCCACACGCCATGGCGCTCCCTCAGG...TTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCAAGCTGAGGCCACCGTaGAGGCCTCACTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: SCRYYRQCIPISTERKSIKLRPP*RPHWPL
Trigger: GAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTT...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp TTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAACACACACACAGGTTCTaGCTCGCCAGAGCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LQAAGTIDSVFPLVQKEKHTHRF*LARARP
Trigger: TGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTG...TTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACACTACGCCTTTGCAATTaGCTGTACACATACACACAC +
Preference number: 2 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTLRLCN*LYTYTH
Trigger: GTGTGTGTATGTGTACAGGCAATTGCAAAGGCGTAG...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR GCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGAAAGGAAGGGAAATATTaGGACACGAATGAAGGGACA +
Preference number: 2 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRKEGKY*DTNEGT
Trigger: TGTCCCTTCATTCGTGTCGCAATATTTCCCTTCCTT...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR TCA 90 bp GGAATTGTCTCATTCTGCTCATGTTTTCTATGTTTCTTCCAAAACTCTATGCATTCCTGGTTAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: GIVSFCSCFLCFFQNSMHSWLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTAACCAGGA...ATGCATAGAGTTTTGGAAGAAACATAGAAAACATGAGCAGAATGAGACAATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 72 bp CCGCGCCCGGCCCCGATGGCTTCCCAGCACTCCACGTaGCTCCTAGCAGGGGGCTGGCTGCCTGTCCAAGCC +
Preference number: 3 (lower is better)
Translates to: PRPAPMASQHST*LLAGGWLPVQA
Trigger: GGCTTGGACAGGCAGCCAGCCCCCTGCTAGGAGCCACGTGGAGTGCTGGGAAGCCATCGGGGCCGGGCGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 72 bp ACAGGAAAGCTACGCGAGGGTGGCGGCCGCCCTCCGTaGACCAGGTTACCATGTCCCCGCCCGCACGCCCGG +
Preference number: 3 (lower is better)
Translates to: TGKLREGGGRPP*TRLPCPRPHAR
Trigger: CCGGGCGTGCGGGCGGGGACATGGTAACCTGGTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTTCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 72 bp GCCCAGGGGCAGGCGGGCTCCTGCACACACCCAGGATaGTGCCCTTGGAGGCACCCGAGTGCACACTCCCGC +
Preference number: 3 (lower is better)
Translates to: AQGQAGSCTHPG*CPWRHPSAHSR
Trigger: GCGGGAGTGTGCACTCGGGTGCCTCCAAGGGCATCATCCTGGGTGTGTGCAGGAGCCCGCCTGCCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 72 bp CCACGTAGGCCTCCGCACGGCGTCCCTGGCCAACAGTaGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAG +
Preference number: 3 (lower is better)
Translates to: PRRPPHGVPGQQ*SHVHPPRGPVQ
Trigger: CTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCCAGGGACGCCGTGCGGAGGCCTACGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp CTGATGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCCCGGCAGGCCAGGCTTaGGGTCCAACCGACTGGTCC +
Preference number: 3 (lower is better)
Translates to: LMGQGRAPQNSRAQGQAGPAGQA*GPTDWS
Trigger: GGACCAGTCGGTTGGACCCAAAGCCTGGCCTGCCGG...GCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 72 bp CCACCGTGCAGGCCTCACTGGCCTCTCAGTCTCGCCTaGGGGAGCGCCATGGCGTGTGGCCAGGGAGTGCTG +
Preference number: 3 (lower is better)
Translates to: PPCRPHWPLSLA*GSAMACGQGVL
Trigger: CAGCACTCCCTGGCCACACGCCATGGCGCTCCCTCAGGCGAGACTGAGAGGCCAGTGAGGCCTGCACGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp ACACACTCGGGCTCAGCATGCACCCGGCCTCCCCGCTaGCCTCTGGCACAGGGGCGCCCACCTAAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: THSGSACTRPPR*PLAQGRPPKSV
Trigger: GACAGACTTAGGTGGGCGCCCCTGTGCCAGAGGGCAGCGGGGAGGCCGGGTGCATGCTGAGCCCGAGTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 72 bp CGGGGCACGCGGAGCCCGGGCTGTACCGGACAGTCCTaGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGC +
Preference number: 3 (lower is better)
Translates to: RGTRSPGCTGQS*KTTGKLREGGG
Trigger: GCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGCCCGGGCTCCGCGTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp GCGGAGAGCAGGGCAGCACCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCCCAGGATGATGCCCTaGGAGGCACCCGAGTGCACA +
Preference number: 3 (lower is better)
Translates to: AESRAAPSAANRPRNADAPRMMP*EAPECT
Trigger: TGTGCACTCGGGTGCCTCCAAGGGCATCATCCTGGG...GGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTGCTCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp GGAGGCAACCAGGAGGCCATGGGGAGCCCTGTCCCTTaGACAGGCCAGGGTGACCCCAACTGTCAGCGGCTG +
Preference number: 3 (lower is better)
Translates to: GGNQEAMGSPVP*TGQGDPNCQRL
Trigger: CAGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTCCTGGTTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 72 bp GGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTaGGGAACCGCAGGCTGGGCACCGTCACCAACGCGT +
Preference number: 3 (lower is better)
Translates to: GTGEDFRAPAML*GTAGWAPSPTR
Trigger: ACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 72 bp GGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTaGCCCCAACTGTCAGCGGCTGCTGACTCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: GHGEPCPLHRPG*PQLSAAADSLQ
Trigger: CTGAAGGGAGTCAGCAGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 72 bp CCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTaGGGGAGGCAACCAGGAGGCCATGGGGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: PWRVARECCYQP*GRQPGGHGEPC
Trigger: ACAGGGCTCCCCATGGCCTCCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp CTGCCTCGCCAGAGCAAGGCCACAGGGCAGCAACAGTaGAGGGGGCAGCCTCAGGTCACGGGATCTCAGACG +
Preference number: 3 (lower is better)
Translates to: LPRQSKATGQQQ*RGQPQVTGSQT
Trigger: CGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTGTTGCTGCCCTGTGGCCTTGCTCTGGCGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 72 bp GCACAGGCCAGGGTGACCCCAACTGTCAGCGGCTGCTaGCTCCCTTCAGCACCACTGCCACAAGAGGCACCC +
Preference number: 3 (lower is better)
Translates to: AQARVTPTVSGC*LPSAPLPQEAP
Trigger: GGGTGCCTCTTGTGGCAGTGGTGCTGAAGGGAGTCAGCAGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp GAGCATCAGCCCAGCTGTCGCACAGGGTCTCGCGGGTaGTGGTCACGGGACCTGCGGCCACTCCAAGCTAAT +
Preference number: 3 (lower is better)
Translates to: EHQPSCRTGSRG*WSRDLRPLQAN
Trigger: ATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGCACCCGCGAGACCCTGTGCGACAGCTGGGCTGATGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 72 bp CGGAGTCCCCTCGACCGGGAGCTGCGGGCCTGGGAATaGACAGCACAGGCAGAAGCATTCGTGGTTCGTCAG +
Preference number: 3 (lower is better)
Translates to: RSPLDRELRAWE*TAQAEAFVVRQ
Trigger: CTGACGAACCACGAATGCTTCTGCCTGTGCTGTGCATTCCCAGGCCCGCAGCTCCCGGTCGAGGGGACTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 72 bp CTAAAGGCACGGGAGAGGATTTCCGAGCGCCTGCGATaGTGTGGGGAACCGCAGGCTGGGCACCGTCACCAA +
Preference number: 3 (lower is better)
Translates to: LKARERISERLR*CGEPQAGHRHQ
Trigger: TTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCTTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 72 bp AAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATaGCACCTGTGGCTTCACCTCCAAGGGGCTCCTGCG +
Preference number: 3 (lower is better)
Translates to: KGLRLSLLPIPG*HLWLHLQGAPA
Trigger: CGCAGGAGCCCCTTGGAGGTGAAGCCACAGGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 72 bp CATCAGCCCAGCTGTCGCACAGGGTCTCGCGGGTGCTaGTCACGGGACCTGCGGCCACTCCAAGCTAATGAA +
Preference number: 3 (lower is better)
Translates to: HQPSCRTGSRGC*SRDLRPLQANE
Trigger: TTCATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGCACCCGCGAGACCCTGTGCGACAGCTGGGCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 72 bp CAGCGTGACCACGAGGGGCGTGAATACCCACTGTGCTaGTGGGTCAGGGACGCGCACCACAGAACTCCAGAG +
Preference number: 3 (lower is better)
Translates to: QRDHEGREYPLC*WVRDAHHRTPE
Trigger: CTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAGCACAGTGGGTATTCACGCCCCTCGTGGTCACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp GCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTaGGCCGAGTCCAATTCTGTCCACAAAGCCCGACCT +
Preference number: 3 (lower is better)
Translates to: ANRPRNADALLF*AESNSVHKARP
Trigger: AGGTCGGGCTTTGTGGACAGAATTGGACTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CCA 72 bp ACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTaGCGGCCGCCCTCCGTGGACCAGGTTACCATGTCC +
Preference number: 3 (lower is better)
Translates to: TVLENHRKATRG*RPPSVDQVTMS
Trigger: GGACATGGTAACCTGGTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 72 bp TTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTaGGCACCGTCACCAACGCGTCACAACAGAGCAAAT +
Preference number: 3 (lower is better)
Translates to: FRAPAMLWGTAG*APSPTRHNRAN
Trigger: ATTTGCTCTGTTGTGACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp CTCTGGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTGCTCTTCGGGCGCTGGCCAGATTaGATGGCTGTGGGAGAGGGC +
Preference number: 3 (lower is better)
Translates to: LWHRGAHLSLSFAGNLLFGRWPD*MAVGEG
Trigger: GCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCC...GAAGAGCAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CAA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGATCTTGAGCTGCCACTaGACCTGTGTCTCAGCATCA +
Preference number: 3 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGILSCH*TCVSAS
Trigger: TGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGAT...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 72 bp CACCCATCTCCAGTTTCACAGCCGTGGCGAAGGGTGTaGAGCACTGTAGCCTGCCCTCTCTGGCGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: HPSPVSQPWRRV*STVACPLWRFP
Trigger: GGGAAAGCGCCAGAGAGGGCAGGCTACAGTGCTTCACACCCTTCGCCACGGCTGTGAAACTGGAGATGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCAAGGGACAGATTAACTaGCTCCTCGGATCCGGGCAC +
Preference number: 3 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLKGQIN*LLGSGH
Trigger: GTGCCCGGATCCGAGGAGCAAGTTAATCTGTCCCTT...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 72 bp CAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTaGGGGCCTGGGAATGCACAGCACAGGCAGAAGCAT +
Preference number: 3 (lower is better)
Translates to: QQIHIGVPSTGS*GPGNAQHRQKH
Trigger: ATGCTTCTGCCTGTGCTGTGCATTCCCAGGCCCGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 72 bp GGGCCTGGGAATGCACAGCACAGGCAGAAGCATTCGTaGTTCGTCAGCTCCTGGCAGACGGGACTCACTTCA +
Preference number: 3 (lower is better)
Translates to: GPGNAQHRQKHS*FVSSWQTGLTS
Trigger: TGAAGTGAGTCCCGTCTGCCAGGAGCTGACGAACCACGAATGCTTCTGCCTGTGCTGTGCATTCCCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR CCA 72 bp GATCCACTCCCACCCACACCCTCGGAAAAGGACAGGTaGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGA +
Preference number: 3 (lower is better)
Translates to: DPLPPTPSEKDR*PRGIRVFKNRR
Trigger: TCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTGGGAGTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGCTGTTCAGGGTGTTCTaGTTCTCTTGTTCTCACTCA +
Preference number: 3 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETLFRVF*FSCSHS
Trigger: TGAGTGAGAACAAGAGAACAAGAACACCCTGAACAG...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGCTGTGCGAACAGGCTTaGGTGGTTCTTGTTCTAGGA +
Preference number: 3 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQLCEQA*VVLVLG
Trigger: TCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAG...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 72 bp ATCCCAGCACTCTGGGAAGCCGAGGCGGGCAAATCGTaGGGTCAGGAGATCGAGACCATCCTGGTTAACATG +
Preference number: 3 (lower is better)
Translates to: IPALWEAEAGKS*GQEIETILVNM
Trigger: CATGTTAACCAGGATGGTCTCGATCTCCTGACCTCACGATTTGCCCGCCTCGGCTTCCCAGAGTGCTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR TCA 72 bp CTGCGCCGAGTCCAATTCTGTCCACAAAGCCCGACCTaGCATCTTGAGCTGCCACTTGACCTGTGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: LRRVQFCPQSPT*HLELPLDLCLS
Trigger: GCTGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGAATTGGACTCGGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp GGGCACCGTCACCAACGCGTCACAACAGAGCAAATCTaGATAGCCTTCCCCAACTACCACCGAAAGGATGGC +
Preference number: 3 (lower is better)
Translates to: GHRHQRVTTEQI*IAFPNYHRKDG
Trigger: GCCATCCTTTCGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGACGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 72 bp AGGTCACGGGATCTCAGACGAGACACGGAGCATCTGTaGAGTCTAGGAACACTGCATTCCAGGAAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: RSRDLRRDTEHL*SLGTLHSRKSP
Trigger: GGGGCTCTTCCTGGAATGCAGTGTTCCTAGACTGCACAGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR-3UTR CAA 90 bp AGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGATTCCAGAACTGCTATaGTGGCACAACAAATTCACA +
Preference number: 3 (lower is better)
Translates to: RHGRGFPSACDAVGNRRLIPELL*WHNKFT
Trigger: TGTGAATTTGTTGTGCCACAATAGCAGTTCTGGAAT...CAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR GCA 72 bp CAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACACTaGTTTCAAGCAACAGTCTCAAGTAGTCTTCGGGTC +
Preference number: 3 (lower is better)
Translates to: QRHKSRSRCCRH*FQATVSSSLRV
Trigger: GACCCGAAGACTACTTGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTTGTGACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 72 bp CCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATaGATGTGGACACCATCCCAACCAGGACTGTTCAGG +
Preference number: 3 (lower is better)
Translates to: PRGIRVFKNRRT*MWTPSQPGLFR
Trigger: CCTGAACAGTCCTGGTTGGGATGGTGTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCGGTGTTCTTGTTCTCTaGTTCTCACTCACTGACTAC +
Preference number: 3 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSGVLVL*FSLTDY
Trigger: GTAGTCAGTGAGTGAGAACAAGAGAACAAGAACACC...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
3UTR-3UTR CAA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACAGGAACAGGACCTGCCTaGAGGCAGAGCGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTGTGPA*RQSGLA
Trigger: TGCCAGGCCGCTCTGCCTCAAGGCAGGTCCTGTTCC...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR TCA 72 bp TCCTTTGTGCTTCTTTTTCTTTGGTGTGTCTTCCTCTaGTGTCCTCCTGCCTCGGCCCCGGGACCCTCTTTT +
Preference number: 3 (lower is better)
Translates to: SFVLLFLWCVFL*CPPASAPGPSF
Trigger: AAAAGAGGGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGACACACCAAAGAAAAAGAAGCACAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445620.5
3UTR GCA 72 bp AATTCTGTCCACAAAGCCCGACCTGACATCTTGAGCTaGCACTTGACCTGTGTCTCAGCATCACCAGGTTCG +
Preference number: 3 (lower is better)
Translates to: NSVHKARPDILS*HLTCVSASPGS
Trigger: CGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp GCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTaGTGCCGACACTGCTTTCAAGCAACAGTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: AEIHQRHKSRSR*CRHCFQATVSS
Trigger: ACTTGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR GCA 72 bp GAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTaGCGACACTGCTTTCAAGCAACAGTCTCAAGTAGT +
Preference number: 3 (lower is better)
Translates to: EIHQRHKSRSRC*RHCFQATVSSS
Trigger: ACTACTTGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TGGCACCTGCGCCCGGAGGATCCACTCCCACCCACACCCTCGGAAAAGGACAGGGCGCGGAGCCGAGTGTaGGGAGGGCAGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: WHLRPEDPLPPTPSEKDRARSRV*GGQPPP
Trigger: TGGCGGCGGCTGCCCTCCTCACACTCGGCTCCGCGC...CCTGTCCTTTTCCGAGGGTGTGGGTGGGAGTGGATCCTCCGGGCGCAGGTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCACCTCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGGTCTCGCGCGCCGCGTaGCCGGAGCCCTCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPRGSCGLLESPLTRGEVSRAA*PEPSRW
Trigger: CCAGCGTGAGGGCTCCGGTCACGCGGCGCGCGAGAC...CTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCGCCCAGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCCCTGAGGGAGCGCCATaGCGTGTGGCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PPSKGTPEAEATVQASLAPEGAP*RVAREC
Trigger: GCACTCCCTGGCCACACGCCATGGCGCTCCCTCAGG...GGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCTGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCTCCTGGACAGGATGGTGCGTaGGCCTGGGTCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WVRDAHHRTPEPRGRRAPGQDGA*AWVPSR
Trigger: CCTGCTGGGGACCCAGGCGCACGCACCATCCTGTCC...AGGAGCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCGCCCAGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCACAGGGACAGGATGGTaGGTGCGCCTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPSKGTPEAEATVQASLATGTGW*VRLGPQ
Trigger: CTGGGGACCCAGGCGCACGCACCATCCTGTCCCTGT...GGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCTGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGCACTCGGGCTCAGCATaGACCCGGCCTCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PSAANRPRNADALLFCAEHSGSA*TRPPRC
Trigger: GCAGCGGGGAGGCCGGGTGCATGCTGAGCCCGAGTG...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TCACCTCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGGAGAGTCGGGCCCGCTaGGCGCAGCCAGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SPPRGSCGLLESPLTRGEESRAR*AQPGAN
Trigger: GTTGGCCCCTGGCTGCGCGCAGCGGGCCCGACTCTC...CTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GCGGAGAGCAGGGCAGCACCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCGTCGTGGCGGCCGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: AESRAAPSAANRPRNADAVVAAA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTGCAGGCGGCCGCCACGAC...GGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTGCTCTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GCGGAGAGCAGGGCAGCACCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTAGCAGGGGGCTaGCTGCCTGTCCAAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AESRAAPSAANRPRNADALLAGG*LPVQAP
Trigger: CGGGGCTTGGACAGGCAGCCAGCCCCCTGCTAGGAG...GGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTGCTCTCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTAGAGGGCCGGGGGCCTaGGGGGACCGCCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASRGPGA*GDRPAR
Trigger: CCTTGCTGGGCGGTCCCCTCAGGCCCCCGGCCCTCT...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGCCGTCCCCGAAACGCTaGCGCCCTCCTCTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGPSPKR*RPPLLR
Trigger: GCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGG...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp AGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCTCAGAACGAGAGCCGACGCTaGGCGGGCAGCGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SKGTPEAEATVQASLASQNESRR*AGSVRE
Trigger: CTCCCGGACGCTGCCCGCCCAGCGTCGGCTCTCGTT...CTGAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCTCCTCCTCCAAGGGGCTCCTaGGGTCTCCTCGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: WVRDAHHRTPEPRGRRAPPPRGS*GLLESP
Trigger: AGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGG...AGGAGCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGGACGAGCAGCAGCAGTaGCCGACCGCCCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRDEQQQ*PTARLH
Trigger: GTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTC...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp GGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGGGCACCCCGTGGCGAAGGGTGTaGAGCACTGTAGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GRGFPSACDAVGNRRLGTPWRRV*STVACP
Trigger: AGGGCAGGCTACAGTGCTTCACACCCTTCGCCACGG...GGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTCCAGGCCAGGGGCCATaGCCTTCTTTTCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPPGQGP*PSFLAK
Trigger: TTTGGCCAGAAAAGAAGGTCATGGCCCCTGGCCTGG...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGGGGTCCCGTCCAGCATaGGACGGGCGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRGSRPA*DGRSAA
Trigger: AGCAGCTGACCGCCCGTCTCATGCTGGACGGGACCC...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AGCGCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCGGCAGCACCCTCTGCTaGCAACCGTCCCCGAAACGC +
Preference number: 4 (lower is better)
Translates to: SAMACGQGVLLSALREATGSTLC*QPSPKR
Trigger: GCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCC...GGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CTGATGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCCTGCCGATTCCGGGATaGCACCTGTGGCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: LMGQGRAPQNSRAQGQAGLPIPG*HLWLHL
Trigger: GAGGTGAAGCCACAGGTGGCATCCCGGAATCGGCAG...GCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GCGGAGAGCAGGGCAGCACCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCTACGTCTCAGCCTCCTaGCGATTCCGGGATGCCACC +
Preference number: 4 (lower is better)
Translates to: AESRAAPSAANRPRNADAYVSAS*RFRDAT
Trigger: GGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTA...GGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTGCTCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCTCAGACAGTACCGCAGCCTTaGCCAGCCCCGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKGTPEAEATVQASLASQTVPQP*PAPGRW
Trigger: CCACCTTCCCGGGGCTGGGCAAGGCTGCGGTACTGT...CTGAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTCTACCACCGAAAGGATaGCTCCGGCTCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPLPPKG*LRLSLV
Trigger: CACCAAGCTGAGCCGGAGCCATCCTTTCGGTGGTAG...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGTGGAAGGGGCCTCCTTaGCGCCTTGGACGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSAANRPRNADALLFCAEWKGPP*RLGRQS
Trigger: GCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCA...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCAGGGATGGTGCGTGCGCCTaGGTCCCCAGCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: AMACGQGVLLSALREATRDGACA*VPSREQ
Trigger: CTGTTCCCTGCTGGGGACCCAGGCGCACGCACCATC...CCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CAA 72 bp TCTCAGCATCACCAGGTTCGAGGGCGCTGGCCAGATTaGATGGCTGTGGGAGAGGGCCGGGGGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SQHHQVRGRWPD*MAVGEGRGPEG
Trigger: CCCCTCAGGCCCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGATGCTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCACAGGGTCTCGCGGGTaGTGGTCACGGGACCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLTGSRG*WSRDLR
Trigger: CCGCAGGTCCCGTGACCAGCACCCGCGAGACCCTGT...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCAGGAAGCTGAGGCCACCGTaGAGGCCTCACTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AMACGQGVLLSALREATRKLRPP*RPHWPL
Trigger: GAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTT...CCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGGGCACCGGCACAGGCAGTACGTaGGTTCGTTTGGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: GRGFPSACDAVGNRRLGTGTGST*VRLGPR
Trigger: CCGTGGACCCAAACGAACCCACGTACTGCCTGTGCC...GGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGGCAGCACTGCCACCTTaGGAAACAGCACTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSAANRPRNADALLFCAEAALPP*ETALGE
Trigger: CTCACCCAGTGCTGTTTCTCAAGGTGGCAGTGCTGC...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp GCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCAGGGAATACCCACTGTGCTaGTGGGTCAGGGACGCGCAC +
Preference number: 4 (lower is better)
Translates to: AMACGQGVLLSALREATREYPLC*WVRDAH
Trigger: GTGCGCGTCCCTGACCCATCAGCACAGTGGGTATTC...CCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp GAGGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTGACCCCAACTGTCAGTTCGGGTCTCTCCTCTaGCAGCAGCACGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: EAMGSPVPCTGQGDPNCQFGSLL*QQHARV
Trigger: GACCCTTGCGTGCTGCTGTCAGAGGAGAGACCCGAA...CTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATGCCACCCAGGGCAGCACCCTCTaGTGCCAACCGTCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: QQHARVYVSASCRFRDATQGSTL*CQPSPK
Trigger: TTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTG...GGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTCCGGGAGGCGGAGGTTaGAGTGAGCAGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASPGGGG*SEQRSR
Trigger: GCGCGATCTCTGCTCACTGCAACCTCCGCCTCCCGG...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGCTCCACGCGCTGGTCTaGAGACAGCGTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETLHALV*RQRLHR
Trigger: ACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAG...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGACAAACTTAGCTGGGTaGCCAGGCGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETTNLAG*PGAVAH
Trigger: GTGAGCCACCGCGCCTGGCCACCCAGCTAAGTTTGT...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCTCCCCGCTGCCCTCTaGCACAGGGGCGCCCACCTA +
Preference number: 4 (lower is better)
Translates to: VSPLTAARKGLRLSLLPILPAAL*HRGAHL
Trigger: TAGGTGGGCGCCCCTGTGCCAGAGGGCAGCGGGGAG...AATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TCACCTCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGGCTGGAAATCAGGCCTaGGGCTGTCAGTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SPPRGSCGLLESPLTRGEAGNQA*GCQWQY
Trigger: GTACTGCCACTGACAGCCTCAGGCCTGATTTCCAGC...CTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CTCTGGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTGCTCTTCGGGCACCCCAGAAGCTaGGGCCACCGTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWHRGAHLSLSFAGNLLFGHPRS*GHRAGL
Trigger: GAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCC...GAAGAGCAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCTCCTAAAGCGCGCCAGGTCTaGATCAAGCCTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: WVRDAHHRTPEPRGRRAPKARQV*IKPSNV
Trigger: CACATTCGAAGGCTTGATGCAGACCTGGCGCGCTTT...AGGAGCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CACCCACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGACCCTCGACCGGGAGCTaGGGGCCTGGGAATGCACAG +
Preference number: 4 (lower is better)
Translates to: HPHPRKRTGGPEASVCSRPSTGS*GPGNAQ
Trigger: CTGTGCATTCCCAGGCCCGCAGCTCCCGGTCGAGGG...TCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GCGGAGAGCAGGGCAGCACCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCGACTTTCCAGAGCCCTaGAGTTTTGCGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AESRAAPSAANRPRNADADFPEP*SFALQG
Trigger: TCCCTGAAGCGCAAAACTGCAGGGCTCTGGAAAGTC...GGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTGCTCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGCTGAGGTCAGCAGGCTaGGGTGTGGCAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SPGSRALARFDGCGRGPGLRSAG*GVAVIL
Trigger: AAGGATGACTGCCACACCCCAGCCTGCTGACCTCAG...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGCAGGTTCGAGGGCGCTaGCCAGATTTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPGSRALARFDGCGRGPGQVRGR*PDLMAV
Trigger: CACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTG...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGAGAACGCAGTCGTGCTaGGCTCCAGGTGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SPGSRALARFDGCGRGPGRTQSC*APGELW
Trigger: CCAAAGCTCACCTGGAGCCCAGCACGACTGCGTTCT...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTGTAATCCCAGCACTCTaGGAGGCCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASVIPAL*EAEAGR
Trigger: TCTGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTAC...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGAGCTGGAAGTTCCTCTaGAGTTCGCAGGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGSWKFL*SSQGRF
Trigger: GAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCT...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TGGCACCTGCGCCCGGAGGATCCACTCCCACCCACACCCTCGGAAAAGGACAGGCCGAGACCAAATCCTTaGATCACCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WHLRPEDPLPPTPSEKDRPRPNP*ITPREK
Trigger: CTTCTCCCTGGGGGTGATTCAAGGATTTGGTCTCGG...CCTGTCCTTTTCCGAGGGTGTGGGTGGGAGTGGATCCTCCGGGCGCAGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCAGCCCTGGCCAACAGTaGGACGGGCGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSSPGQQ*DGRSAA
Trigger: AGCAGCTGACCGCCCGTCTCACTGTTGGCCAGGGCT...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCTTGCACAGGCCAGGGTaGCCCCAACTGTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LELPLDLCLSITRFEGAGLHRPG*PQLSAA
Trigger: AGCCGCTGACAGTTGGGGTCACCCTGGCCTGTGCAA...GCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTCGTCACTGTATTCCTTaGACTTGCTGTAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPRHCIP*TCCRRS
Trigger: AGAACGCCTACAGCAAGTGCAAGGAATACAGTGACG...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACCCCCTCGCCAGACGGTaGCAGCGAGCCCTTCCGCGC +
Preference number: 4 (lower is better)
Translates to: SLELKSISVTSPGPGAADPLARR*QRALPR
Trigger: GCGCGGAAGGGCTCGCTGGCACCGTCTGGCGAGGGG...GTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATGCCACCCCCCCATCCTGCCCCTaGTGTCAAACACAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: QQHARVYVSASCRFRDATPPSCP*CQTQRF
Trigger: GAAACGCTGTGTTTGACAGCAGGGGCAGGATGGGGG...GGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CTGATGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCAAAGAGGAAACAACTTaGCCGTTCCCTCTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LMGQGRAPQNSRAQGQAGKEETT*PFPLRA
Trigger: AGCACGGAGAGGGAACGGGCAAGTTGTTTCCTCTTT...GCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AGCGCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCGGAGCAGCTCCTGCCTaGCTAACACTGGACTTCATG +
Preference number: 4 (lower is better)
Translates to: SAMACGQGVLLSALREATGAAPA*LTLDFM
Trigger: CATGAAGTCCAGTGTTAGGCAGGCAGGAGCTGCTCC...GGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGTTATCTTCCGTCCTCTaGTCCAGCTCTCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: PSAANRPRNADALLFCAELSSVL*SSSRIS
Trigger: GCTGATGCGAGAGCTGGACCAGAGGACGGAAGATAA...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGAGGCAGAAGCATTCGTaGTTCGTCAGCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETRQKHS*FVSSWQ
Trigger: CTGCCAGGAGCTGACGAACCACGAATGCTTCTGCCT...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCTGGGGAACCGCAGGCTaGGCACCGTCACCAACGCGT +
Preference number: 4 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRWGTAG*APSPTR
Trigger: ACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCA...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CTGATGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCCTTGAGAAACAGCACTaGGTGAGGAAGAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: LMGQGRAPQNSRAQGQAGLEKQH*VRKRPG
Trigger: TCCTGGTCTCTTCCTCACCCAGTGCTGTTTCTCAAG...GCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GTGCAGTCTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGGCAACCAGGAGGCCATaGGGAGCCCTGTCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VQSRNTAFQEEPRARGEQATRRP*GALSLA
Trigger: TGCAAGGGACAGGGCTCCCCATGGCCTCCTGGTTGC...CTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAGACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp AGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTCTCAGGGAGGAACGTGGCCGTaGGAAAAACAGTCACGATCA +
Preference number: 4 (lower is better)
Translates to: SKGTPEAEATVQASLASQGGTWP*EKQSRS
Trigger: TGATCGTGACTGTTTTTCTCACGGCCACGTTCCTCC...CTGAGAGGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCGCGTTCTGGATCTTCTaGAGGCGCTCCACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSAFWIF*RRSTRW
Trigger: CCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAACGC...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCGGGCACATTCGCAGATaGAGAGGGCTCGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLGHIRR*RGLGFT
Trigger: GGTGAAACCGAGCCCTCTGCATCTGCGAATGTGCCC...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGTCGTGGAGTGACTCTTaGTCCCATTGCTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: SPGSRALARFDGCGRGPGSWSDS*SHCSWT
Trigger: TGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGA...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGCAGGGAGGTGCTGCCGACACTaGTTTCAAGCAACAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SKGLLRSPRVTSHPRRAGRCCRH*FQATVS
Trigger: TGAGACTGTTGCTTGAAAGCAGTGTCGGCAGCACCT...CCCTGCTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACAAAGCTACGCGAGGGTaGCGGCCGCCCTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDKATRG*RPPSVD
Trigger: GTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTT...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGGGGTCTCGCGGGTGCTaGTCACGGGACCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AQQIHNKFTSESPRPGAAGSRGC*SRDLRP
Trigger: TGGCCGCAGGTCCCGTGACCAGCACCCGCGAGACCC...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCTCGGAAAAGGACAGGTaGCCCAGAGGCATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: AVPDSPGKPQESYARVAASEKDR*PRGIRV
Trigger: CACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGA...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGGCCTGAATCTGCATCAGCCTGCTaGGTCCTCCTGGACCTGATG +
Preference number: 4 (lower is better)
Translates to: LGTLHSRKSPGHVGNRPESASAC*VLLDLM
Trigger: CATCAGGTCCAGGAGGACTCAGCAGGCTGATGCAGA...TTCAGGCCTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CTGATGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCAGGTGCTTATGTGCTTaGGCAATTCCTGCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LMGQGRAPQNSRAQGQAGRCLCA*AIPAVK
Trigger: TTTGACTGCAGGAATTGCTCAAGCACATAAGCACCT...GCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TTTGGTGTGTCTTCCTCTGATGTCCTCCTGCCTCGGCCCCGGGACCCTCTTTTTGCGTTCTGGATCTTCTaGAGGCGCTCCACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FGVSSSDVLLPRPRDPLFAFWIF*RRSTRW
Trigger: CCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAACGC...AAAAAGAGGGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGACACACCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR GCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTAGCTTTCAAAATCACTaGCCTCCATCTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPSFQNH*PPSCPS
Trigger: TGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCT...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCAGCACATCAGAGGGGTaGACGGACAGGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLSTSEG*TDRMVS
Trigger: TGACACCATCCTGTCCGTGCACCCCTCTGATGTGCT...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCGCTGGTCACGGGACCTaGGGCCACTCCAAGCTAATG +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSAGHGT*GHSKLM
Trigger: CATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGC...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCCTGCGGGCCTGGGAATaGACAGCACAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRLRAWE*TAQAEA
Trigger: TGCTTCTGCCTGTGCTGTGCATTCCCAGGCCCGCAG...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGAGAAACAGGCGTCCCTaGATTCCTCAGCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETRNRRP*IPQQSS
Trigger: AGAGGATTGCTGAGGAATGCAGGGACGCCTGTTTCT...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TGGCACCTGCGCCCGGAGGATCCACTCCCACCCACACCCTCGGAAAAGGACAGGGTTTTCACTGCAGCCTaGCTTCCCCTACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: WHLRPEDPLPPTPSEKDRVFTAA*LPLQDF
Trigger: GAAATCCTGTAGGGGAAGGCAGGCTGCAGTGAAAAC...CCTGTCCTTTTCCGAGGGTGTGGGTGGGAGTGGATCCTCCGGGCGCAGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GAGGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTGACCCCAACTGTCAGGACTCAGAACGCTGTTaGCACCTCCTTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EAMGSPVPCTGQGDPNCQDSERC*HLLCAS
Trigger: AGAAGCACAAAGGAGGTGGCAACAGCGTTCTGAGTC...CTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCTTCATCCACACACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGCACACACACACAGGTTCTaGCTCGCCAGAGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSSTHTGSASPEQGHRAAHTHRF*LARARP
Trigger: TGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTG...TGCTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCGAGCCAGGAAAGCCATaGATCCACCAAGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: LELPLDLCLSITRFEGAGEPGKP*IHQGGC
Trigger: GCATCCGCCTTGGTGGATGCATGGCTTTCCTGGCTC...GCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCGCCCAGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCTTCAAGGTGCTTATGTaGTTGAGCAATTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PPSKGTPEAEATVQASLAFKVLM*LSNSCS
Trigger: ACTGCAGGAATTGCTCAAGCACATAAGCACCTTGAA...GGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCTGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp ACAACCCCAGCGCTTTCCAGGGGTAGCCACAGGTGTGAACAGCTCAAAGGTGGAAGGCGCTCCACGCGCTaGTCTGGAGACAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: TTPALSRGSHRCEQLKGGRRSTR*SGDSVF
Trigger: GAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCT...TCCACCTTTGAGCTGTTCACACCTGTGGCTACCCCTGGAAAGCGCTGGGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTGTGAAACCACTCAATTaGACAGTCTGGATTGTCACA +
Preference number: 4 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPVKPLN*TVWIVT
Trigger: TGTGACAATCCAGACTGTCCAATTGAGTGGTTTCAC...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCTGGTTCGTCAGCTCCTaGCAGACGGGACTCACTTCA +
Preference number: 4 (lower is better)
Translates to: AVPDSPGKPQESYARVAAWFVSS*QTGLTS
Trigger: TGAAGTGAGTCCCGTCTGCCAGGAGCTGACGAACCA...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCGTAATCCCAGCACTCTaGGAAGCCGACGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSVIPAL*EADAGG
Trigger: TCCGCCTGCGTCGGCTTCCCAGAGTGCTGGGATTAC...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GCCCTTCATCCACACACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGCTGGACAGACAGTGCTaGAAATCAGGCCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALHPHTQVLPRQSKATGQLDRQC*KSGLRL
Trigger: CAGCCTCAGGCCTGATTTCCAGCACTGTCTGTCCAG...CTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CTCTGGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTGCTCTTCGCCTCCTTGGCGCCTTaGACGTCAGAGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LWHRGAHLSLSFAGNLLFASLAP*TSEPSF
Trigger: GAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGC...GAAGAGCAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TGGCACCTGCGCCCGGAGGATCCACTCCCACCCACACCCTCGGAAAAGGACAGGAAGAACCGCAGAACATaGATGTGGACACCATCCCAA +
Preference number: 4 (lower is better)
Translates to: WHLRPEDPLPPTPSEKDRKNRRT*MWTPSQ
Trigger: TTGGGATGGTGTCCACATTCATGTTCTGCGGTTCTT...CCTGTCCTTTTCCGAGGGTGTGGGTGGGAGTGGATCCTCCGGGCGCAGGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCTGTCCACAAAGCCCGACCTGACATCTTGAGCTGCCACTTGACCTGTGTCTCAGAACAGGACCTGCCTTaGGGCAGAGCGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SVHKARPDILSCHLTCVSEQDLP*GRAAWH
Trigger: GTGCCAGGCCGCTCTGCCTCAAGGCAGGTCCTGTTC...TGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCTCCAGGTGCTACAGGTaGCACTGCCCTTCATCCACA +
Preference number: 4 (lower is better)
Translates to: LELPLDLCLSITRFEGAGSRCYR*HCPSST
Trigger: TGTGGATGAAGGGCAGTGTCACCTGTAGCACCTGGA...GCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AGCGCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCCGTCACTGTATTCCTTaGACTTGCTGTAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: SAMACGQGVLLSALREATRHCIP*TCCRRS
Trigger: AGAACGCCTACAGCAAGTGCAAGGAATACAGTGACG...GGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp ACAACCCCAGCGCTTTCCAGGGGTAGCCACAGGTGTGAACAGCTCAAAGGTGGACAAGTCCGGCAGGGCTaGTGGACACCAGACAAGCTG +
Preference number: 4 (lower is better)
Translates to: TTPALSRGSHRCEQLKGGQVRQG*WTPDKL
Trigger: CAGCTTGTCTGGTGTCCAGCAGCCCTGCCGGACTTG...TCCACCTTTGAGCTGTTCACACCTGTGGCTACCCCTGGAAAGCGCTGGGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp CTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCGGACAGGAGCAGCACTaGCACCTTGAGAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: LELPLDLCLSITRFEGAGGQEQH*HLEKQH
Trigger: GTGCTGTTTCTCAAGGTGGCAGTGCTGCTCCTGTCC...GCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CTCTGGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTGCTCTTCCTCCACGCGCTGGTCTaGAGACAGCGTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: LWHRGAHLSLSFAGNLLFLHALV*RQRLHR
Trigger: ACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAG...GAAGAGCAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp ATGTCCAGCACATCAGAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACAGGCGCTCCACGCGCTaGTCTGGAGACAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: MSSTSEGCTDRMVSVNSDRRSTR*SGDSVF
Trigger: GAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCT...GTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR CCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGGCGGCCGCCCTCCGTaGACCAGGTTACCATGTCCC +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNGGRPP*TRLPCP
Trigger: GGGACATGGTAACCTGGTCCACGGAGGGCGGCCGCC...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGCGCCTGCGATGCTGTaGGGAACCGCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNAPAML*GTAGWA
Trigger: TGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGC...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGAATAAACATCTGTGTTaGCCGGGTGCGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRNKHLC*PGAVAH
Trigger: ATGAGCCACCGCACCCGGCCAACACAGATGTTTATT...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCGCCTCCAGAGTCTCGTaGAGTGACTCTTGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LELPLDLCLSITRFEGAGASRVS*SDSCSH
Trigger: ATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGC...GCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TCTGTCCACAAAGCCCGACCTGACATCTTGAGCTGCCACTTGACCTGTGTCTCAAGAGCCCCGGGCACGTaGGGAACAGGCCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SVHKARPDILSCHLTCVSRAPGT*GTGLKR
Trigger: CCTCTTCAGGCCTGTTCCCCACGTGCCCGGGGCTCT...TGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCCTACAATTGCCACGTaGCCAGCGTCTACACAGCCC +
Preference number: 4 (lower is better)
Translates to: VSPLTAARKGLRLSLLPIPTIAT*PASTQP
Trigger: GGGCTGTGTAGACGCTGGCCACGTGGCAATTGTAGG...AATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGAGAACTGCTAGGATGTaGACCAACCTGATGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPGSRALARFDGCGRGPGRTARM*TNLMSL
Trigger: CAGTGACATCAGGTTGGTCCACATCCTAGCAGTTCT...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACTGGTGTGTCTTCCTCTaGTGTCCTCCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDWCVFL*CPPASA
Trigger: GGCCGAGGCAGGAGGACATCAGAGGAAGACACACCA...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp GCGGAGAGCAGGGCAGCACCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCTTCCTATTATCATCATaGCCCACATTTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: AESRAAPSAANRPRNADAFLLSS*PTFQRS
Trigger: ACTCCTCTGAAATGTGGGTCATGATGATAATAGGAA...GGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGGTGCTGCCCTGCTCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TCACCAGGTTCGAGGGCGCTGGCCAGATTTGATGGCTGTGGGAGAGGGCCGGGGTGTATTCCTTGCACTTaGTGTAGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SPGSRALARFDGCGRGPGCIPCT*CRRSGS
Trigger: AGATCCAGAACGCCTACAGCAAGTGCAAGGAATACA...CCCCGGCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCCTCGAACCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGCTTGTCCTTCAGATCTaGTTCAAAGCGCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQLVLQI*FKARQV
Trigger: GACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAG...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGACAACAGAGCAAATCTaGATAGCCTTCCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: RHGRGFPSACDAVGNRRLTTEQI*IAFPNY
Trigger: GTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGT...CAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TCACCAACGCGTCACAACAGAGCAAATCTGCATAGCCTTCCCCAACTACCACCGGGATTTCCGAGCGCCTaGGATGCTGTGGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SPTRHNRANLHSLPQLPPGFPSA*DAVGNR
Trigger: GCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCC...CGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGGCAAGGCGTGGATGGTaGAAATGGTGTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQARRGW*KWCGFC
Trigger: ACAGAAGCCACACCATTTGCACCATCCACGCCTTGC...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GTGCAGTCTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGGACTCTTGCTCCCATTaGTCCTGGACAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VQSRNTAFQEEPRARGEQDSCSH*SWTDSA
Trigger: AGCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTC...CTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAGACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACGCAGGGAACAGGACCTaGCTTGAGGCAGAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLELKSISVTSPGPGAADAGNRT*LEAERP
Trigger: AGGCCGCTCTGCCTCAAGGCAGGTCCTGTTCCCTGC...GTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTTCCAGGTCCAGGTGCTaGCGACACTGCTTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: VSPLTAARKGLRLSLLPISRSRC*RHCFQA
Trigger: TGCTTGAAAGCAGTGTCGGCAGCACCTGGACCTGGA...AATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCTTCATCCACACACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGCAAAGTCCAGGTCCAGGTaGTGCCGACACTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: PSSTHTGSASPEQGHRAAKSRSR*CRHCFQ
Trigger: TTGAAAGCAGTGTCGGCAGCACCTGGACCTGGACTT...TGCTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GAGGCCATGGGGAGCCCTGTCCCTTGCACAGGCCAGGGTGACCCCAACTGTCAGCCTTTGCAGGTAATCTaGTCTTCTGCTCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: EAMGSPVPCTGQGDPNCQPLQVI*SSALSL
Trigger: GAGAGAAAGAGCAGAAGAGCAGATTACCTGCAAAGG...CTGACAGTTGGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCCCATGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTTGCTTGAGCAATTCCTaGAGTCAAATGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASCLSNS*SQMGPP
Trigger: TGGAGGGCCCATTTGACTGCAGGAATTGCTCAAGCA...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGTGCTCCAAGTACATaGCGGTCGCCATCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRSAPST*RSPSSS
Trigger: GGACGAAGATGGCGACCGCCATGTACTTGGAGCACT...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp ATGTCCAGCACATCAGAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCTCCACGCGCTGGTCTaGAGACAGCGTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: MSSTSEGCTDRMVSVNSDLHALV*RQRLHR
Trigger: ACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAG...GTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR CCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATCGGGAGCTGCGGGCCTaGGAATGCACAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNRELRA*ECTAQA
Trigger: TGCCTGTGCTGTGCATTCCCAGGCCCGCAGCTCCCG...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CACCCACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAAAATACAAACTTAGCTaGGTGGCCAGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: HPHPRKRTGGPEASVCSRKYKLS*VARRGG
Trigger: GCCACCGCGCCTGGCCACCCAGCTAAGTTTGTATTT...TCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCTGGGATGGTGCACAGTaGCAGGCAGGACCACATCAT +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSWDGAQ*QAGPHH
Trigger: ATGATGTGGTCCTGCCTGCCACTGTGCACCATCCCA...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGTTCTGGAGCAAGGCGTaGATGGTGCAAATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQFWSKA*MVQMVW
Trigger: CCACACCATTTGCACCATCCACGCCTTGCTCCAGAA...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACGAGCGCCATGGCGTGTaGCCAGGGAGTGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: SLELKSISVTSPGPGAADERHGV*PGSAAI
Trigger: GATAGCAGCACTCCCTGGCCACACGCCATGGCGCTC...GTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGCGTTTACTCCGGAGGTaGGTCCCCGAGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: STMYPPRSINICVGRVRWRLLRR*VPEGGL
Trigger: CAGTCCTCCCTCGGGGACTCACCTCCGGAGTAAACG...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCTCTCAGCACAAGTATTaGAGGCCAATCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: AVPDSPGKPQESYARVAASQHKY*RPITAH
Trigger: GTGAGCAGTGATTGGCCTTCAATACTTGTGCTGAGA...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACACTGTCAGCGGCTGCTaGCTCCCTTCAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SLELKSISVTSPGPGAADTVSGC*LPSAPL
Trigger: CAGTGGTGCTGAAGGGAGTCAGCAGCCGCTGACAGT...GTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGCGTGGAGATGTACTCTaGAGCCAGGATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQRGDVL*SQDVNL
Trigger: GAGATTGACATCCTGGCTGCAGAGTACATCTCCACG...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCCTCCTTTGTGCTTCAGCACATCAGAGGGGTaGACGGACAGGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EGCTDRMVSVNSDPPLCFSTSEG*TDRMVS
Trigger: TGACACCATCCTGTCCGTGCACCCCTCTGATGTGCT...GAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR GCA 90 bp CACCCACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAAGGGACAGATTAACTTaGTCCTCGGATCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: HPHPRKRTGGPEASVCSRRDRLT*SSDPGT
Trigger: TGTGCCCGGATCCGAGGAGCAAGTTAATCTGTCCCT...TCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCTCCGAGCGCCTGCGATaGTGTGGGGAACCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNISERLR*CGEPQA
Trigger: AGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGA...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TCACCAACGCGTCACAACAGAGCAAATCTGCATAGCCTTCCCCAACTACCACCGCCGAGATCACGCCACTaGTCTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SPTRHNRANLHSLPQLPPPRSRH*SPAWVT
Trigger: TGTCACCCAGGCTGGAGAGCAGTGGCGTGATCTCGG...CGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGCTGGGCCAGCGTCATTaGTCAAAGCAGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AQQIHNKFTSESPRPGAALGQRH*SKQPQP
Trigger: TGGCTGGGGCTGCTTTGAGCAATGACGCTGGCCCAG...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TCACCTCCAAGGGGCTCCTGCGGTCTCCTCGAGTCACCTCTCACCCGCGGAGAGGCTTTTCTACGCCTTTaGAATTGCCTGTACACATAC +
Preference number: 4 (lower is better)
Translates to: SPPRGSCGLLESPLTRGEAFLRL*NCLYTY
Trigger: GTATGTGTACAGGCAATTGCAAAGGCGTAGAAAAGC...CTCTCCGCGGGTGAGAGGTGACTCGAGGAGACCGCAGGAGCCCCTTGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTTGGTTCTCCTACAATTaGCACGTGGCCAGCGTCTAC +
Preference number: 4 (lower is better)
Translates to: VSPLTAARKGLRLSLLPIWFSYN*HVASVY
Trigger: GTAGACGCTGGCCACGTGGCAATTGTAGGAGAACCA...AATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AGTCTTCGGGTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCAGAGCCCTGCAGTTTTaGGCTTCAGGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: SLRVSPLTAARKGLRLSLRALQF*ASGTTV
Trigger: CACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCT...GAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGACCCGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CACCCACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACAGCGTCTTCACCGTaGAGATGTACTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HPHPRKRTGGPEASVCSRTASSP*RCTLQP
Trigger: TGGCTGCAGAGTACATCTCCACGGTGAAGACGCTGT...TCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCTGTACCGGACAGTCCTaGAAAACCACAGGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLCTGQS*KTTGKL
Trigger: TAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACA...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCATGGTGCAAATGGTGTaGCTTCTGTGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSMVQMV*LLCPCR
Trigger: CCTGCAGGGACACAGAAGCCACACCATTTGCACCAT...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGCCTCAATCCAAGAGATaGGTCTGGGGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AQQIHNKFTSESPRPGAAPQSKR*VWGRAA
Trigger: AGCTGCCCGGCCCCAGACCCATCTCTTGGATTGAGG...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGTTCTTACACTTCCCCTaGCTTAAAATTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETFLHFP*LKIPLS
Trigger: GCTGAGAGGAATTTTAAGCCAGGGGAAGTGTAAGAA...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CCCAGACACTGGCAGGGACGAGCAGCAGCAGTGGCCGACCGCCCGCCTGCACCTACAATCTCTCCTGAATaGGAACATTTTCTTACACTT +
Preference number: 4 (lower is better)
Translates to: PRHWQGRAAAVADRPPAPTISPE*EHFLTL
Trigger: AAGTGTAAGAAAATGTTCCCATTCAGGAGAGATTGT...AGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CTCTGGCACAGGGGCGCCCACCTAAGTCTGTCCTTTGCAGGTAATCTGCTCTTCCAGTACGAAGGACACTaGATGCTCAGCCACGCAGAC +
Preference number: 4 (lower is better)
Translates to: LWHRGAHLSLSFAGNLLFQYEGH*MLSHAD
Trigger: GTCTGCGTGGCTGAGCATCCAGTGTCCTTCGTACTG...GAAGAGCAGATTACCTGCAAAGGACAGACTTAGGTGGGCGCCCCTGTGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGCCACGAATATCTAGTTaGTATGTAAACACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSAANRPRNADALLFCAEPRISS*YVNTAG
Trigger: ACCTGCTGTGTTTACATACCAACTAGATATTCGTGG...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp GAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCCTCCTTTGTGCTTCAGCTGGAAGTTCCTCTaGAGTTCGCAGGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: EGCTDRMVSVNSDPPLCFSWKFL*SSQGRF
Trigger: GAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCT...GAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR TCA 90 bp CACCCACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACAGGATGGTGTCAGTaGACTCAGACCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HPHPRKRTGGPEASVCSRTGWCQ*TQTLLC
Trigger: ACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGT...TCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGTCCTGGTTAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRSWLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTAACCAGGA...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCGGCAAGAGAATCACTTaGACCCAGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSGKRIT*TQEAEV
Trigger: AACCTCTGCTTCCTGGGTTCAAGTGATTCTCTTGCC...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCACCAACGCGTCACAACAGAGCAAATCTGCATAGCCTTCCCCAACTACCACCGCACCTTCGGCTCAGATaGAGCTGCCACAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: SPTRHNRANLHSLPQLPPHLRLR*SCHSDP
Trigger: TGGGTCACTGTGGCAGCTTCATCTGAGCCGAAGGTG...CGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTCTTCAGGGACAACAGTaGACATTTATCGATCCCATG +
Preference number: 4 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASLQGQQ*TFIDPM
Trigger: CATGGGATCGATAAATGTTCACTGTTGTCCCTGAAG...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATGCCACCCAGGATGTCAATCTCTaGTTTCTTATCTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QQHARVYVSASCRFRDATQDVNL*FLIFRP
Trigger: AGGACGGAAGATAAGAAAGCAGAGATTGACATCCTG...GGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCCTCCTTTGTGCTTCAAAGCGCGCCAGGTCTaGATCAAGCCTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: EGCTDRMVSVNSDPPLCFKARQV*IKPSNV
Trigger: CACATTCGAAGGCTTGATGCAGACCTGGCGCGCTTT...GAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR GCA 90 bp CAGCAAACCCTCCCACCGCCACCAGTCTGCACAGCTGCTTCTCGCTGCTCCAGGAAGGAAGGGAAATATTaGGACACGAATGAAGGGACA +
Preference number: 4 (lower is better)
Translates to: QQTLPPPPVCTAASRCSRKEGKY*DTNEGT
Trigger: TGTCCCTTCATTCGTGTCGCAATATTTCCCTTCCTT...CCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGGGAGGGTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AGTCTTCGGGTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCCTGACATCTTGAGCTaGCACTTGACCTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLRVSPLTAARKGLRLSLPDILS*HLTCVS
Trigger: TGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGG...GAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGACCCGAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TCACCAACGCGTCACAACAGAGCAAATCTGCATAGCCTTCCCCAACTACCACCGGTAATCCCAGCACTCTaGGAAGCCGAGGCGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SPTRHNRANLHSLPQLPPVIPAL*EAEAGK
Trigger: TTTGCCCGCCTCGGCTTCCCAGAGTGCTGGGATTAC...CGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGGGAGGTCGAGGCGGGTaGATCACTTCAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: STMYPPRSINICVGRVRWGGRGG*ITSGQE
Trigger: CTCCTGACCTGAAGTGATCCACCCGCCTCGACCTCC...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGGCCACAGTGACCCACTaGTTCCAGCCCACACACCCT +
Preference number: 4 (lower is better)
Translates to: STMYPPRSINICVGRVRWATVTH*FQPTHP
Trigger: AGGGTGTGTGGGCTGGAACCAGTGGGTCACTGTGGC...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCGTCCCTGGCCAACAGTaGTCTCATGTCCACCCGCCC +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNIVPGQQ*SHVHPP
Trigger: GGGCGGGTGGACATGAGACCACTGTTGGCCAGGGAC...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATTCCGCACGGCGTCCCTaGCCAACAGTGGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNSARRP*PTVVSC
Trigger: ACATGAGACCACTGTTGGCCAGGGACGCCGTGCGGA...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AGTCTTCGGGTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCTGCTCCCATTGCTCCTaGACAGACAGTGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLRVSPLTAARKGLRLSLCSHCS*TDSAGN
Trigger: ATTTCCAGCACTGTCTGTCCAGGAGCAATGGGAGCA...GAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGACCCGAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGGCCTGAAGAGGAGTTGGAGGCATaGAAAGAGGAAACAACTTGC +
Preference number: 4 (lower is better)
Translates to: LGTLHSRKSPGHVGNRPEEELEA*KEETTC
Trigger: GCAAGTTGTTTCCTCTTTCCATGCCTCCAACTCCTC...TTCAGGCCTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp GTGCACGGACAGGATGGTGTCAGTGAACTCAGACCCTCCTTTGTGCTTCTTTTTTGGTGTGTCTTCCTCTaGTGTCCTCCTGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VHGQDGVSELRPSFVLLFWCVFL*CPPASA
Trigger: GGCCGAGGCAGGAGGACATCAGAGGAAGACACACCA...AAAAAGAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR TCA 90 bp TTTGGTGTGTCTTCCTCTGATGTCCTCCTGCCTCGGCCCCGGGACCCTCTTTTTACAGGATGGTGTCAGTaGACTCAGACCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: FGVSSSDVLLPRPRDPLFTGWCQ*TQTLLC
Trigger: ACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGT...AAAAAGAGGGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGACACACCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR TCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGTCCGGCTCAGCTTGGTaGACGCTCATTAAACAAAAA +
Preference number: 4 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQSGSAW*TLIKQK
Trigger: TTTTTGTTTAATGAGCGTTCACCAAGCTGAGCCGGA...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp GTCACGATCAGGGAAAGCCAAGGAGCAGAAGTCTGGGTCCCAGAGGGAATCAACGTGGCAGTCATCCTTTaGTCACGCAGGAACACCAAG +
Preference number: 4 (lower is better)
Translates to: VTIRESQGAEVWVPEGINVAVIL*SRRNTK
Trigger: CTTGGTGTTCCTGCGTGATCAAAGGATGACTGCCAC...GTTGATTCCCTCTGGGACCCAGACTTCTGCTCCTTGGCTTTCCCTGATCGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACAGTGCTGGGCTCCAGGTaGGCTTTGGGAGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTVLGSR*ALGGAP
Trigger: CGGGGCTCCTCCCAAAGCTCACCTGGAGCCCAGCAC...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCCAGGATGTCAATCTCTaGTTTCTTATCTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AVPDSPGKPQESYARVAAQDVNL*FLIFRP
Trigger: AGGACGGAAGATAAGAAAGCAGAGATTGACATCCTG...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp ATGTCCAGCACATCAGAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCTTGTCCTTCAGATCTaGTTCAAAGCGCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: MSSTSEGCTDRMVSVNSDLVLQI*FKARQV
Trigger: GACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAG...GTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR GCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATACCAGTCTGCACAGCTaGTTCTCGCTGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNTSLHS*FSLLQA
Trigger: TGCCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGT...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp CTTGAGCTGCCACTTGACCTGTGTCTCAGCATCACCAGGTTCGAGGGCGCTGGCCTACGCCTTTGCAATTaGCTGTACACATACACACAC +
Preference number: 4 (lower is better)
Translates to: LELPLDLCLSITRFEGAGLRLCN*LYTYTH
Trigger: GTGTGTGTATGTGTACAGGCAATTGCAAAGGCGTAG...GCCAGCGCCCTCGAACCTGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CAGTGCAGGGGGCAGCCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTCCCGTTCCCTCTCCGTaGTATAATTTGTATACATCA +
Preference number: 4 (lower is better)
Translates to: QCRGQPQVTGSQTRHGASPVPSP*YNLYTS
Trigger: TGATGTATACAAATTATAGCACGGAGAGGGAACGGG...AGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGGCTGCCCCCTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACTTATCTTCCGTCCTCTaGTCCAGCTCTCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDLSSVL*SSSRIS
Trigger: GCTGATGCGAGAGCTGGACCAGAGGACGGAAGATAA...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp ATGTCCAGCACATCAGAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACTTATCTTCCGTCCTCTaGTCCAGCTCTCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: MSSTSEGCTDRMVSVNSDLSSVL*SSSRIS
Trigger: GCTGATGCGAGAGCTGGACCAGAGGACGGAAGATAA...GTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR CCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCTTCAGGCCCAGACACTaGCAGGGACGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNIFRPRH*QGRAAA
Trigger: TGCTGCTGCTCGTCCCTGCCAGTGTCTGGGCCTGAA...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACCGTGGATGGTGCAAATaGTGTGGCTTCTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDRGWCK*CGFCVP
Trigger: AGGGACACAGAAGCCACACCATTTGCACCATCCACG...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCGGACACCAGACAAGCTaGCCGGTGTCCCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNIGHQTS*PVSPSV
Trigger: GACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCC...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGAATTCATCTCCCAGCTaGGCGCAGTGGCTGACACCT +
Preference number: 4 (lower is better)
Translates to: STMYPPRSINICVGRVRWNSSPS*AQWLTP
Trigger: AGGTGTCAGCCACTGCGCTCAGCTGGGAGATGAATT...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACCCTCAGATCACTGACTaGTACCGCAGCACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDPQITD*YRSTEN
Trigger: GTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGG...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGCATCATCGTTTTGGATaGAACGTGGTTAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQHHRFG*NVVKGG
Trigger: TCCACCTTTAACCACGTTTCATCCAAAACGATGATG...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp ATGTCCAGCACATCAGAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCGTGGAGATGTACTCTaGAGCCAGGATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: MSSTSEGCTDRMVSVNSDRGDVL*SQDVNL
Trigger: GAGATTGACATCCTGGCTGCAGAGTACATCTCCACG...GTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
3UTR CAA 72 bp GAGTCCAATTCTGTCCACAAAGCCCGACCTGACATCTaGAGCTGCCACTTGACCTGTGTCTCAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: ESNSVHKARPDI*SCHLTCVSASP
Trigger: TGGTGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGGACAGAATTGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATAGCTGGAAGTTCCTCTaGAGTTCGCAGGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNSWKFL*SSQGRF
Trigger: GAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCT...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCTATCAAATTCATTTCTaGAAAATTGCCAGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: AVPDSPGKPQESYARVAAYQIHF*KIARRC
Trigger: ACAGCGCCTGGCAATTTTTCAGAAATGAATTTGATA...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACATGCACACACCCAGGATaGTGCCCTTGGAGGCACCCG +
Preference number: 4 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTCTHPG*CPWRHP
Trigger: CGGGTGCCTCCAAGGGCATCATCCTGGGTGTGTGCA...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TCTTTAGAGCTGAAATCCATCAGCGTCACAAGTCCAGGTCCAGGTGCTGCCGACAATATCTTAATGCTGTaGGCCACAGGAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLELKSISVTSPGPGAADNILML*ATGGWL
Trigger: CAGCCAGCCTCCTGTGGCTCACAGCATTAAGATATT...GTCGGCAGCACCTGGACCTGGACTTGTGACGCTGATGGATTTCAGCTCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp ATGTCCAGCACATCAGAGGGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCGTCACTGTATTCCTTaGACTTGCTGTAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: MSSTSEGCTDRMVSVNSDRHCIP*TCCRRS
Trigger: AGAACGCCTACAGCAAGTGCAAGGAATACAGTGACG...GTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR GCA 90 bp GTCTCTCCTCTGACAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTAGCTTTCAAAATCACTaGCCTCCATCTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSPLTAARKGLRLSLLPISFQNH*PPSCPS
Trigger: TGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCT...AATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTGTCAGAGGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TCCACAATGTATCCTCCACGATCAATAAACATCTGTGTTGGCCGGGTGCGGTGGAAGGTCGCCCTTCTGTaGGAACAGGCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: STMYPPRSINICVGRVRWKVALL*EQALVV
Trigger: AACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT...CCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACATTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCCCAGGAAGCAGAGGTTaGAGTGAGCCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNIPGSRG*SEPRWC
Trigger: GCACCATCTTGGCTCACTGCAACCTCTGCTTCCTGG...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGACCACCGCCACCAGTCTaGACAGCTGCTTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRPPPPV*TAASRC
Trigger: GCAGCGAGAAGCAGCTGTGCAGACTGGTGGCGGTGG...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCGTTTTGGATGAAACGTaGTTAAAGGTGGACACCACA +
Preference number: 4 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRVLDET*LKVDTT
Trigger: TGTGGTGTCCACCTTTAACCACGTTTCATCCAAAAC...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACACCGGGATGCCACCTGTaGCTTCACCTCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTPGCHL*LHLQGA
Trigger: AGCCCCTTGGAGGTGAAGCCACAGGTGGCATCCCGG...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCTTCATCCACACACACAGGTTCTGCCTCGCCAGAGCAAGGCCACAGGGCAGCATTTTCCACCTCTCTATaGCAGAGACAGTTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: PSSTHTGSASPEQGHRAAFSTSL*QRQFFL
Trigger: TAGGAAAAACTGTCTCTGCCATAGAGAGGTGGAAAA...TGCTGCCCTGTGGCCTTGCTCTGGCGAGGCAGAACCTGTGTGTGTGGATGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp ACAACCCCAGCGCTTTCCAGGGGTAGCCACAGGTGTGAACAGCTCAAAGGTGGAATATTGCGACACGAATaGAGGGACAGATTAACTTGC +
Preference number: 4 (lower is better)
Translates to: TTPALSRGSHRCEQLKGGILRHE*RDRLTC
Trigger: GCAAGTTAATCTGTCCCTTCATTCGTGTCGCAATAT...TCCACCTTTGAGCTGTTCACACCTGTGGCTACCCCTGGAAAGCGCTGGGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCCTTGTTCTCACTCACTaGCTACCAGCTTCTCGACGG +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNILVLTH*LPASRR
Trigger: CCGTCGAGAAGCTGGTAGTCAGTGAGTGAGAACAAG...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TTTGGTGTGTCTTCCTCTGATGTCCTCCTGCCTCGGCCCCGGGACCCTCTTTTTAGCTTTCAAAATCACTaGCCTCCATCTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FGVSSSDVLLPRPRDPLFSFQNH*PPSCPS
Trigger: TGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCT...AAAAAGAGGGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGACACACCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR CCA 90 bp CTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAGCTGAGCCCCTGCACTaGGCCCCGCGCTTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTSCRYYRQCIPISTERKAEPLH*APRFGK
Trigger: CTTCCCGAAGCGCGGGGCCCAGTGCAGGGGCTCAGC...TTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTGTGCAGTCTAGGAACCATTTATCGATCCCATaGTTCTCCTACAATTGCCAC +
Preference number: 4 (lower is better)
Translates to: PQVTGSQTRHGASVQSRNHLSIP*FSYNCH
Trigger: GTGGCAATTGTAGGAGAACCATGGGATCGATAAATG...GTTCCTAGACTGCACAGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTGTGCAGTCTAGGAACACATTTCAGAGGAGTTaGAGGCATGGAAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PQVTGSQTRHGASVQSRNTFQRS*RHGKRK
Trigger: TTTCCTCTTTCCATGCCTCCAACTCCTCTGAAATGT...GTTCCTAGACTGCACAGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCTTGACCCCAGGAGTTTaGGACCAGTCTGGCCAATAT +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNILTPGV*DQSGQY
Trigger: ATATTGGCCAGACTGGTCTCAAACTCCTGGGGTCAA...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACTCATTTCTGAAAAATTaGCAGGCGCTGTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDSFLKN*QALFQH
Trigger: GTGCTGAAACAGCGCCTGGCAATTTTTCAGAAATGA...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCGGGAGCCCTGTCCCTTaGACAGGCCAGGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSIGSPVP*TGQGDP
Trigger: GGGGTCACCCTGGCCTGTGCAAGGGACAGGGCTCCC...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
3UTR CAA 72 bp TGGACACCATCCCAACCAGGACTGTTCAGGGTGTTCTaGTTCTCTTGTTCTCACTCACTGACTACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WTPSQPGLFRVF*FSCSHSLTTSF
Trigger: GAAGCTGGTAGTCAGTGAGTGAGAACAAGAGAACAAGAACACCCTGAACAGTCCTGGTTGGGATGGTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACACAGAGTCTCGTGGAGTaGCTCTTGCTCCCATTGCTC +
Preference number: 4 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTQSLVE*LLLPLL
Trigger: GAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTG...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCCCTCTCAGTCTCGCCTaGGGGAGCGCCATGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSIPLSLA*GSAMAC
Trigger: ACACGCCATGGCGCTCCCTCAGGCGAGACTGAGAGG...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACACCACAAAGCCCGACCTaGCATCTTGAGCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTPQSPT*HLELPL
Trigger: AAGTGGCAGCTCAAGATGTCAGGTCGGGCTTTGTGG...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATTGTATTCCTTGCACTTaGTGTAGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNCIPCT*CRRSGS
Trigger: AGATCCAGAACGCCTACAGCAAGTGCAAGGAATACA...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp TCACCAACGCGTCACAACAGAGCAAATCTGCATAGCCTTCCCCAACTACCACCGCTCAATTGGACAGTCTaGATTGTCACAGCCAATCAT +
Preference number: 4 (lower is better)
Translates to: SPTRHNRANLHSLPQLPPLNWTV*IVTANH
Trigger: ATGATTGGCTGTGACAATCCAGACTGTCCAATTGAG...CGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTGTGACGCGTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCCACTCAGGATTCAGTTaGGTCCAAACTACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNIHSGFS*VQTTAQ
Trigger: TTGGGCTGTAGTTTGGACCCAACTGAATCCTGAGTG...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCTCCACAGGGACAGGATaGTGCGTGCGCCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSISTGTG*CVRLGP
Trigger: GGGACCCAGGCGCACGCACCATCCTGTCCCTGTGGA...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAATGCTGCTATCAGCCCTaGGGGAGGCAACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LTSCRYYRQCIPISTERKCCYQP*GRQPGG
Trigger: GCCTCCTGGTTGCCTCCCTCAGGGCTGATAGCAGCA...TTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp CTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAGCGTTCTGGATCTTCTaGAGGCGCTCCACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LTSCRYYRQCIPISTERKAFWIF*RRSTRW
Trigger: CCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAACGC...TTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGAAAAGCGCGCCAGGTCTaGATCAAGCCTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRKARQV*IKPSNV
Trigger: CACATTCGAAGGCTTGATGCAGACCTGGCGCGCTTT...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGAAGCTCCTGTTTTCACTaGAGCCTGCCTTCCCCTACA +
Preference number: 4 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRSSCFH*SLPSPT
Trigger: TGTAGGGGAAGGCAGGCTGCAGTGAAAACAGGAGCT...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCACCCGTCTGCCCACCTaGACCATCCTCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSITRLPT*TILLSL
Trigger: GAGGGACAGGAGGATGGTGCAGGTGGGCAGACGGGT...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCCGGCAGGCCAGGCTTTaGGTCCAACCGACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSIRQARL*VQPTGP
Trigger: AGGACCAGTCGGTTGGACCCAAAGCCTGGCCTGCCG...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GTGCACGGACAGGATGGTGTCAGTGAACTCAGACCCTCCTTTGTGCTTCTTTTTCAGGATGTCAATCTCTaGTTTCTTATCTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VHGQDGVSELRPSFVLLFQDVNL*FLIFRP
Trigger: AGGACGGAAGATAAGAAAGCAGAGATTGACATCCTG...AAAAAGAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR CCA 90 bp ATAAACTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAAGGCGCTCCACGCGCTaGTCTGGAGACAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: INLQAAGTIDSVFPLVQKRRSTR*SGDSVF
Trigger: GAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCT...TTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp GGAATTGTCTCATTCTGCTCATGTTTTCTATGTTTCTTCCAAAACTCTATGCATCACGCCACAAAGCCCTaGCCAACAGTGAGACGGGCG +
Preference number: 4 (lower is better)
Translates to: GIVSFCSCFLCFFQNSMHHATKP*PTVRRA
Trigger: CGCCCGTCTCACTGTTGGCCAGGGCTTTGTGGCGTG...ATGCATAGAGTTTTGGAAGAAACATAGAAAACATGAGCAGAATGAGACAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR TCA 90 bp AAGGTCGCCCTTCTGTGCGAACAGGCTTTGGTGGTTCTTGTTCTAGGAAACATCCAACACAATCTCTCCTaGATGGGAACATTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: KVALLCEQALVVLVLGNIQHNLS*MGTFSY
Trigger: GTAAGAAAATGTTCCCATTCAGGAGAGATTGTGTTG...GATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGAAGGGCGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCTCCCTTCAGCACCACTaGCACAAGAGGCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSISLQHH*HKRHPL
Trigger: CAGAGGGTGCCTCTTGTGGCAGTGGTGCTGAAGGGA...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCATCCACCAAGGCGGATaGGCTGTGTCCCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSIIHQGG*AVSLCI
Trigger: GATGCAGAGGGACACAGCGCATCCGCCTTGGTGGAT...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp CTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAACTCGACGTCTTGCAATaGGACAGGAGCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LTSCRYYRQCIPISTERKLDVLQ*DRSSTA
Trigger: GGCAGTGCTGCTCCTGTCCCATTGCAAGACGTCGAG...TTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGACTGATACCGCAGCACTaGAAACAAGGAAAATGGGTA +
Preference number: 4 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRLIPQH*KQGKWV
Trigger: TACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAG...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp TTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAATCCAGAACGCAGTCGTaGTGGGCTCCAGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LQAAGTIDSVFPLVQKEKSRTQS*WAPGEL
Trigger: AAGCTCACCTGGAGCCCAGCACGACTGCGTTCTGGA...TTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp ATAAACTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAACACGGGAGCAGCTCCTaGCTGCCTAACACTGGACTT +
Preference number: 4 (lower is better)
Translates to: INLQAAGTIDSVFPLVQKHGSSS*LPNTGL
Trigger: AAGTCCAGTGTTAGGCAGGCAGGAGCTGCTCCCGTG...TTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR TCA 90 bp CTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAATCCCCTTCATCCTCTaGGAAATGTCCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTSCRYYRQCIPISTERKIPFIL*EMSRQP
Trigger: AGGCTGCCTGGACATTTCTCAGAGGATGAAGGGGAT...TTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp GACCCCGGCCTTCCTAGTGATCATACTTTAATGATTTACCGTGACAAAACTCTTTGTATTCCTTGCACTTaGTGTAGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: DPGLPSDHTLMIYRDKTLCIPCT*CRRSGS
Trigger: AGATCCAGAACGCCTACAGCAAGTGCAAGGAATACA...AAGAGTTTTGTCACGGTAAATCATTAAAGTATGATCACTAGGAAGGCCGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCCTTGTCCTTCAGATCTaGTTCAAAGCGCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSILVLQI*FKARQV
Trigger: GACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAG...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR GCA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCGACACGGAGCATCTGTaGAGTCTAGGAACACTGCAT +
Preference number: 4 (lower is better)
Translates to: SCRYYRQCIPISTERKSIDTEHL*SLGTLH
Trigger: ATGCAGTGTTCCTAGACTGCACAGATGCTCCGTGTC...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CCA 90 bp TTCCTCAGATCACTGACTGATACCGCAGCACTGAAAACAAGGAAAATGGGTAGACCAGAACTGCTATTGTaGCACAACAAATTCACAACA +
Preference number: 4 (lower is better)
Translates to: FLRSLTDTAALKTRKMGRPELLL*HNKFTT
Trigger: TGTTGTGAATTTGTTGTGCCACAATAGCAGTTCTGG...TCTACCCATTTTCCTTGTTTTCAGTGCTGCGGTATCAGTCAGTGATCTGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CCA 90 bp GGAATTGTCTCATTCTGCTCATGTTTTCTATGTTTCTTCCAAAACTCTATGCATAAAATTAGCTGGGCGTaGTGGTGGACGCCTATAATC +
Preference number: 4 (lower is better)
Translates to: GIVSFCSCFLCFFQNSMHKISWA*WWTPII
Trigger: GATTATAGGCGTCCACCACCACGCCCAGCTAATTTT...ATGCATAGAGTTTTGGAAGAAACATAGAAAACATGAGCAGAATGAGACAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp GGAATTGTCTCATTCTGCTCATGTTTTCTATGTTTCTTCCAAAACTCTATGCATGCTTCATTCCAGAACTaGTATTGTGGCACAACAAAT +
Preference number: 4 (lower is better)
Translates to: GIVSFCSCFLCFFQNSMHASFQN*YCGTTN
Trigger: ATTTGTTGTGCCACAATAGCAGTTCTGGAATGAAGC...ATGCATAGAGTTTTGGAAGAAACATAGAAAACATGAGCAGAATGAGACAATTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR GCA 90 bp ATAAACTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAAATAAACTTACAAGCTaGAGGTACTATAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: INLQAAGTIDSVFPLVQKNKLTS*RYYRQC
Trigger: ACACTGTCTATAGTACCTGCAGCTTGTAAGTTTATT...TTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAGTTTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 90 bp CGCGTGACCGGAGCCCTCACGCTGGCAGCGGGCACCGCAGGGCCCTaGGAGTCGGGCCCGCTGCGCGCAGCCAGGGGCCAACGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: RVTGALTLAAGTAGP*ESGPLRAARGQREP
Trigger: CGGCTCTCGTTGGCCCCTGGCTGCGCGCAGCGGGCCCGACTCTCAGGGCCCTGCGGTGCCCGCTGCCAGCGTGAGGGCTCCGGTCACGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 90 bp CCCGCGCTTCGGGAAGCATCTCGCTCGTTCGTCTCGCGCGCCGCGTaGCCGGAGCCCTCACGCTGGCAGCGGGCACCGCAGGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PALREASRSFVSRAA*PEPSRWQRAPQGPE
Trigger: CTCAGGGCCCTGCGGTGCCCGCTGCCAGCGTGAGGGCTCCGGTCACGCGGCGCGCGAGACGAACGAGCGAGATGCTTCCCGAAGCGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp CCGCCCAGCAAGGGCACCCCAGAAGCTGAGGCCACCGTGCAGGCCTCACTGGCCGGCCTCCTTGGCGCCTaGGACGTCAGAGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PPSKGTPEAEATVQASLAGLLGA*DVRAQL
Trigger: AAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCC...GGCCAGTGAGGCCTGCACGGTGGCCTCAGCTTCTGGGGTGCCCTTGCTGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp GGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGGGCACCCACGCAGGCCTCCGCTaGGCATCCATGTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GRGFPSACDAVGNRRLGTHAGLR*ASMSPA
Trigger: TGCTGGGGACATGGATGCCAAGCGGAGGCCTGCGTG...GGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp GCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCAGGGGAACAGGACCTGCCTaGAGGCAGAGCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: AMACGQGVLLSALREATRGTGPA*RQSGLA
Trigger: TGCCAGGCCGCTCTGCCTCAAGGCAGGTCCTGTTCC...CCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp CAGCAGCACGCAAGGGTCTACGTCTCAGCCTCCTGCCGATTCCGGGATGCCACCGGGCGCTGGCCAGATTaGATGGCTGTGGGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: QQHARVYVSASCRFRDATGRWPD*MAVGEG
Trigger: GCCCTCTCCCACAGCCATCAAATCTGGCCAGCGCCC...GGTGGCATCCCGGAATCGGCAGGAGGCTGAGACGTAGACCCTTGCGTGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp TGGGTCAGGGACGCGCACCACAGAACTCCAGAGCCCAGGGGCAGGCGGGCTCCTGCCCGACCTGACATCTaGAGCTGCCACTTGACCTGT +
Preference number: 5 (lower is better)
Translates to: WVRDAHHRTPEPRGRRAPARPDI*SCHLTC
Trigger: ACAGGTCAAGTGGCAGCTCAAGATGTCAGGTCGGGC...AGGAGCCCGCCTGCCCCTGGGCTCTGGAGTTCTGTGGTGCGCGTCCCTGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 90 bp CATCCTGCCCCTGCTGTCAAACACAGCGTTTCCAGAACGCAGTCGTaGTGGGCTCCAGGTGAGCTTTGGGAGGAGCCCCGGCTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: HPAPAVKHSVSRTQS*WAPGELWEEPRLSP
Trigger: GGGGCTCAGCCGGGGCTCCTCCCAAAGCTCACCTGGAGCCCAGCACGACTGCGTTCTGGAAACGCTGTGTTTGACAGCAGGGGCAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 90 bp CTGCCCACCTGCACCATCCTCCTGTCCCTCTGGAAGGGGCCTCCTTaGCGCCTTGGACGTCAGAGCCCAGCTTCAGAGCTGGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: LPTCTILLSLWKGPP*RLGRQSPASELALP
Trigger: TGGTAAGGCCAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCAGGTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS CCA 90 bp CTCAGGATGACCCGTCTGCCCACCTGCACCATCCTCCTGTCCCTCTaGAAGGGGCCTCCTTGGCGCCTTGGACGTCAGAGCCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LRMTRLPTCTILLSL*KGPPWRLGRQSPAS
Trigger: TGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCAGGTGGGCAGACGGGTCATCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS-3UTR CAA 90 bp GTGCAGTCTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGCCGGCAGGCCAGGCTTaGGGTCCAACCGACTGGTCC +
Preference number: 5 (lower is better)
Translates to: VQSRNTAFQEEPRARGEQPAGQA*GPTDWS
Trigger: GGACCAGTCGGTTGGACCCAAAGCCTGGCCTGCCGG...CTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAGACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 90 bp GCCCCTGACAACGGCACCCCCTCAAAGGCTGCGGTGAGGACAGGCTaGCGACAGGCGCGCAGCGTAAGAATCAGAATACCACCCGGCACA +
Preference number: 5 (lower is better)
Translates to: APDNGTPSKAAVRTG*RQARSVRIRIPPGT
Trigger: TGTGCCGGGTGGTATTCTGATTCTTACGCTGCGCGCCTGTCGTCAGCCTGTCCTCACCGCAGCCTTTGAGGGGGTGCCGTTGTCAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492488.5
CDS CCA 90 bp CTGCACCATCCTCCTGTCCCTCTGGAAGGGGCCTCCTTGGCGCCTTaGACGTCAGAGCCCAGCTTCAGAGCTGGCCTTACCAGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LHHPPVPLEGASLAP*TSEPSFRAGLTSLS
Trigger: AGACAGGCTGGTAAGGCCAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS TCA 90 bp GCATCCACCAAGGCGGATGCGCTGTGTCCCTCTGCATCAGCCTGCTaGGTCCTCCTGGACCTGATGAGAGACAGTACCGCAGCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: ASTKADALCPSASAC*VLLDLMRDSTAALP
Trigger: GGGCAAGGCTGCGGTACTGTCTCTCATCAGGTCCAGGAGGACTCAGCAGGCTGATGCAGAGGGACACAGCGCATCCGCCTTGGTGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 90 bp AGGGGCCTCCTTGGCGCCTTGGACGTCAGAGCCCAGCTTCAGAGCTaGCCTTACCAGCCTGTCTCGACGTCTTGCAATGGGACAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RGLLGALDVRAQLQS*PYQPVSTSCNGTGA
Trigger: TGCTCCTGTCCCATTGCAAGACGTCGAGACAGGCTGGTAAGGCCAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS-3UTR CAA 90 bp GCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCAGGCAGAGCCCTGCAGTTTaGCGCTTCAGGGACAACAGT +
Preference number: 5 (lower is better)
Translates to: AMACGQGVLLSALREATRQSPAV*RFRDNS
Trigger: ACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCTG...CCTGGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGGCACTCAGGATTCAGTaGGGTCCAAACTACAGCCCA +
Preference number: 5 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETALRIQ*GPNYSP
Trigger: TGGGCTGTAGTTTGGACCCAACTGAATCCTGAGTGC...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp AGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGTCCGAGACCAAATCCTaGAATCACCCCCAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: RHGRGFPSACDAVGNRRLSETKS*NHPQGE
Trigger: TTCTCCCTGGGGGTGATTCAAGGATTTGGTCTCGGA...CAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CCGGGCACGTGGGGAACAGGCCTGAAGAGGGCAGTCCACAGGGACAGGATGGTGATGGTTCTCCTACAATaGCCACGTGGCCAGCGTCTA +
Preference number: 5 (lower is better)
Translates to: PGTWGTGLKRAVHRDRMVMVLLQ*PRGQRL
Trigger: TAGACGCTGGCCACGTGGCAATTGTAGGAGAACCAT...CACCATCCTGTCCCTGTGGACTGCCCTCTTCAGGCCTGTTCCCCACGTGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 90 bp ACCCTTCTCATCTGTCACTACTGGGACCTGCACGGCAGGCAGCGCTaGGCTCCCAGGCTCCGCATTGCTACTAAACAGTGCTGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: TLLICHYWDLHGRQR*APRLRIATKQCWSA
Trigger: CGCTGACCAGCACTGTTTAGTAGCAATGCGGAGCCTGGGAGCTCAGCGCTGCCTGCCGTGCAGGTCCCAGTAGTGACAGATGAGAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS CCA 90 bp GCTGTAGGCGTTCTGGATCTTCTGCAGGCGCTCCACGCGCTGGTCTaGAGACAGCGTCTTCACCGTGGAGATGTACTCTGCAGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AVGVLDLLQALHALV*RQRLHRGDVLCSQD
Trigger: ATCCTGGCTGCAGAGTACATCTCCACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAACGCCTACAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000484145.1
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
ENST00000636051.1
CDS-3UTR CAA 90 bp AGCGCCATGGCGTGTGGCCAGGGAGTGCTGCTATCAGCCCTGAGGGAGGCAACCATGGCCAGCTGCACTTaGTCGTCACTGTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: SAMACGQGVLLSALREATMASCT*SSLYSL
Trigger: CAAGGAATACAGTGACGACAAAGTGCAGCTGGCCAT...GGTTGCCTCCCTCAGGGCTGATAGCAGCACTCCCTGGCCACACGCCATGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 90 bp ACAGGCGCGCAGCGTAAGAATCAGAATACCACCCGGCACACGGGGTaGACTTCACTCGGGTCAGCTTCCATCAGTGTTCCTACATCCGGG +
Preference number: 5 (lower is better)
Translates to: TGAQRKNQNTTRHTG*TSLGSASISVPTSG
Trigger: CCCGGATGTAGGAACACTGATGGAAGCTGACCCGAGTGAAGTGCACCCCGTGTGCCGGGTGGTATTCTGATTCTTACGCTGCGCGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492488.5
CDS-3UTR CAA 90 bp CCTTCCCATCGAGGTCAATCGCACAGCCACAGAGGACCCACACCTTCGGCTCAGAAGGGACAGATTAACTaGCTCCTCGGATCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: PSHRGQSHSHRGPTPSAQKGQIN*LLGSGH
Trigger: GTGCCCGGATCCGAGGAGCAAGTTAATCTGTCCCTT...CTGAGCCGAAGGTGTGGGTCCTCTGTGGCTGTGCGATTGACCTCGATGGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATGTGGACTCTGGGCCAGCGTCATaGCTCAAAGCAGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: QVAQRHPCVQEPQNMNVDSGPAS*LKAAPA
Trigger: GGCTGGGGCTGCTTTGAGCAATGACGCTGGCCCAGA...GTCCACATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CCTCAGGTCACGGGATCTCAGACGAGACACGGAGCATCTGTGCAGTCTAGGAACGCCTGTCTCGACGTCTaGCAATGGGACAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PQVTGSQTRHGASVQSRNACLDV*QWDRSS
Trigger: GCTGCTCCTGTCCCATTGCAAGACGTCGAGACAGGC...GTTCCTAGACTGCACAGATGCTCCGTGTCTCGTCTGAGATCCCGTGACCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGAAGGTGCTTATGTGCTaGAGCAATTCCTGCAGTCAA +
Preference number: 5 (lower is better)
Translates to: PSAANRPRNADALLFCAEKVLMC*SNSCSQ
Trigger: TTGACTGCAGGAATTGCTCAAGCACATAAGCACCTT...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 90 bp AAAGCCATGAGGCCACAGTGGATCTTCCTGTGTTTGCAGAGGTGCTaGCTGTTCCTGAGGTCTCTGAAGCTGGGCAGAGCCCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: KAMRPQWIFLCLQRC*LFLRSLKLGRALRE
Trigger: CTCCCTGAGGGCTCTGCCCAGCTTCAGAGACCTCAGGAACAGCCAGCACCTCTGCAAACACAGGAAGATCCACTGTGGCCTCATGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS-3UTR CAA 90 bp GCTGTACCGGACAGTCCTGGAAAACCACAGGAAAGCTACGCGAGGGTGGCGGCCAGGCAAGAGAATCACTaGAACCCAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: AVPDSPGKPQESYARVAARQENH*NPGSRG
Trigger: ACCTCTGCTTCCTGGGTTCAAGTGATTCTCTTGCCT...GGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CCCTCTGCTGCCAACCGTCCCCGAAACGCTGACGCCCTCCTCTTCTGCGCCGAGAGCTTTTCTACGCCTTaGCAATTGCCTGTACACATA +
Preference number: 5 (lower is better)
Translates to: PSAANRPRNADALLFCAESFSTP*QLPVHI
Trigger: TATGTGTACAGGCAATTGCAAAGGCGTAGAAAAGCT...CTCGGCGCAGAAGAGGAGGGCGTCAGCGTTTCGGGGACGGTTGGCAGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 90 bp TCTTGCTCCCATTGCTCCTGGACAGACAGTGCTGGAAATCAGGCCTaGGGCTGTCAGTGGCAGTACGAAGGACACTGGATGCTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SCSHCSWTDSAGNQA*GCQWQYEGHWMLSH
Trigger: GTGGCTGAGCATCCAGTGTCCTTCGTACTGCCACTGACAGCCTCAGGCCTGATTTCCAGCACTGTCTGTCCAGGAGCAATGGGAGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433036.1
ENST00000636051.1
CDS CCA 90 bp GCTGGTCAGCGCACTGTCAGGACAGGAAAAGCCATGAGGCCACAGTaGATCTTCCTGTGTTTGCAGAGGTGCTGGCTGTTCCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: AGQRTVRTGKAMRPQ*IFLCLQRCWLFLRS
Trigger: AGACCTCAGGAACAGCCAGCACCTCTGCAAACACAGGAAGATCCACTGTGGCCTCATGGCTTTTCCTGTCCTGACAGTGCGCTGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS-3UTR CAA 90 bp AGGCACGGGAGAGGATTTCCGAGCGCCTGCGATGCTGTGGGGAACCGCAGGCTGAGCTGCATCATCGTTTaGGATGAAACGTGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: RHGRGFPSACDAVGNRRLSCIIV*DETWLK
Trigger: CTTTAACCACGTTTCATCCAAAACGATGATGCAGCT...CAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGGCCTGAATGTGGCAGTCATCCTTaGATCACGCAGGAACACCAA +
Preference number: 5 (lower is better)
Translates to: LGTLHSRKSPGHVGNRPECGSHP*ITQEHQ
Trigger: TTGGTGTTCCTGCGTGATCAAAGGATGACTGCCACA...TTCAGGCCTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp CTAGGAACACTGCATTCCAGGAAGAGCCCCGGGCACGTGGGGAACAGGCCTGAAATCTTGAGCTGCCACTaGACCTGTGTCTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: LGTLHSRKSPGHVGNRPEILSCH*TCVSAS
Trigger: TGATGCTGAGACACAGGTCAAGTGGCAGCTCAAGAT...TTCAGGCCTGTTCCCCACGTGCCCGGGGCTCTTCCTGGAATGCAGTGTTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp TCTCCCACGGGTAGACAGCGTCAGCCACAGAGCACTCAGGATTCAGTTGGGTCCCTGTGCGAACAGGCTTaGGTGGTTCTTGTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: SPTGRQRQPQSTQDSVGSLCEQA*VVLVLG
Trigger: TCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAG...GGACCCAACTGAATCCTGAGTGCTCTGTGGCTGACGCTGTCTACCCGTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp GGCCAACAGTGGTCTCATGTCCACCCGCCCAGGGGTCCCGTCCAGCATGAGACGATTCCAGAACTGCTATaGTGGCACAACAAATTCACA +
Preference number: 5 (lower is better)
Translates to: GQQWSHVHPPRGPVQHETIPELL*WHNKFT
Trigger: TGTGAATTTGTTGTGCCACAATAGCAGTTCTGGAAT...CGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGACCACTGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CTGCTGGACACCAGACAAGCTGGCCGGTGTCCCCATCAGTCCCAGCAAACCCTCCTGTTCAGGGTGTTCTaGTTCTCTTGTTCTCACTCA +
Preference number: 5 (lower is better)
Translates to: LLDTRQAGRCPHQSQQTLLFRVF*FSCSHS
Trigger: TGAGTGAGAACAAGAGAACAAGAACACCCTGAACAG...GAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCCAGAACCATTTTCCTTaGGGTTTCGTGGTAAGGTCC +
Preference number: 5 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRQNHFP*GFVVRS
Trigger: GGACCTTACCACGAAACCCAAAGGAAAATGGTTCTG...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp GTCACGATCAGGGAAAGCCAAGGAGCAGAAGTCTGGGTCCCAGAGGGAATCAACAGACTCAGAACGCTGTaGCCACCTCCTTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: VTIRESQGAEVWVPEGINRLRTL*PPPLCF
Trigger: GAAGCACAAAGGAGGTGGCAACAGCGTTCTGAGTCT...GTTGATTCCCTCTGGGACCCAGACTTCTGCTCCTTGGCTTTCCCTGATCGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp ATCTTCCCTATCCCACCCTCCAACCCACGAATATCTAGTTGGTATGTAAACACAGACAGTACCGCAGCCTaGCCCAGCCCCGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IFPIPPSNPRISSWYVNTDSTAA*PSPGKV
Trigger: CACCTTCCCGGGGCTGGGCAAGGCTGCGGTACTGTC...TGTGTTTACATACCAACTAGATATTCGTGGGTTGGAGGGTGGGATAGGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 90 bp AGGGAAGGTTCTCGATACCTATCAGGCCTCCAGAGTCTCGTGGAGTaGCTCTTGCTCCCATTGCTCCTGGACAGACAGTGCTGGAAATCA +
Preference number: 5 (lower is better)
Translates to: REGSRYLSGLQSLVE*LLLPLLLDRQCWKS
Trigger: TGATTTCCAGCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGGTATCGAGAACCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 90 bp GCAGTTTTGCGCTTCAGGGACAACAGTGAACATTTATCGATCCCATaGTTCTCCTACAATTGCCACGTGGCCAGCGTCTACACAGCCCCC +
Preference number: 5 (lower is better)
Translates to: AVLRFRDNSEHLSIP*FSYNCHVASVYTAP
Trigger: GGGGGCTGTGTAGACGCTGGCCACGTGGCAATTGTAGGAGAACCATGGGATCGATAAATGTTCACTGTTGTCCCTGAAGCGCAAAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp ACACCCTCGGAAAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCGGTGTTCTTGTTCTCTaGTTCTCACTCACTGACTAC +
Preference number: 5 (lower is better)
Translates to: TPSEKDRWPRGIRVFKNRGVLVL*FSLTDY
Trigger: GTAGTCAGTGAGTGAGAACAAGAGAACAAGAACACC...GCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS GCA 90 bp CAGACTTGCTTTTTAACCCTCGCCCTCCGGAGCTTTCAAAATCACTaGCCTCCATCTTGTCCTTCAGATCTGCTTCAAAGCGCGCCAGGT +
Preference number: 5 (lower is better)
Translates to: QTCFLTLALRSFQNH*PPSCPSDLLQSAPG
Trigger: ACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCTCCGGAGGGCGAGGGTTAAAAAGCAAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445620.5
ENST00000493261.5
CDS-3UTR CAA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGATGGCCAGCTGCACTTaGTCGTCACTGTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: AQQIHNKFTSESPRPGAAMASCT*SSLYSL
Trigger: CAAGGAATACAGTGACGACAAAGTGCAGCTGGCCAT...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp GGGTGCACGGACAGGATGGTGTCAGTGAACTCAGACCCTCCTTTGTGCTTCTTTATGGCCAGCTGCACTTaGTCGTCACTGTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: GCTDRMVSVNSDPPLCFFMASCT*SSLYSL
Trigger: CAAGGAATACAGTGACGACAAAGTGCAGCTGGCCAT...AAAGAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445620.5
CDS TCA 90 bp ACGGACTTTCCAGAGCCCTGCAGTTTTGCGCTTCAGGGACAACAGTaGACATTTATCGATCCCATGGTTCTCCTACAATTGCCACGTGGC +
Preference number: 5 (lower is better)
Translates to: TDFPEPCSFALQGQQ*TFIDPMVLLQLPRG
Trigger: GCCACGTGGCAATTGTAGGAGAACCATGGGATCGATAAATGTTCACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCTGGAAAGTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGATTGGACAGTCTGGATaGTCACAGCCAATCATCTCC +
Preference number: 5 (lower is better)
Translates to: AQQIHNKFTSESPRPGAAIGQSG*SQPIIS
Trigger: GGAGATGATTGGCTGTGACAATCCAGACTGTCCAAT...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS TCA 90 bp GGTCTTCATGTATTTTGTCTATCAGGCCTCCAGAGTCTCGTGGAGTaGCTCTTGCTCCCATTGCTCCTGGACAGACAGTGCTGGAAATCA +
Preference number: 5 (lower is better)
Translates to: GLHVFCLSGLQSLVE*LLLPLLLDRQCWKS
Trigger: TGATTTCCAGCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGACAAAATACATGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433036.1
CDS-3UTR CAA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGAGTGAAACCACTCAATaGGACAGTCTGGATTGTCAC +
Preference number: 5 (lower is better)
Translates to: AQQIHNKFTSESPRPGAASETTQ*DSLDCH
Trigger: GTGACAATCCAGACTGTCCAATTGAGTGGTTTCACT...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp GCACAACAAATTCACAACAAATTCACATCGGAGTCCCCTCGACCGGGAGCTGCGCTACAGCCCAAGGAATaGTCTCATTCTGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: AQQIHNKFTSESPRPGAALQPKE*SHSAHV
Trigger: AACATGAGCAGAATGAGACAATTCCTTGGGCTGTAG...CGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATTTGTTGTGAATTTGTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp AAAGGACAGGTGGCCCAGAGGCATCCGTGTGTTCAAGAACCGCAGAACATGAATCTCTCAGCACAAGTATaGAAGGCCAATCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: KGQVAQRHPCVQEPQNMNLSAQV*KANHCS
Trigger: TGAGCAGTGATTGGCCTTCAATACTTGTGCTGAGAG...ATTCATGTTCTGCGGTTCTTGAACACACGGATGCCTCTGGGCCACCTGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS-3UTR CAA 90 bp CTTACAAGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAACTGGAAGGGGCCTCCTaGGCGCCTTGGACGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LTSCRYYRQCIPISTERKLEGAS*APWTSE
Trigger: CTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAG...TTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS-3UTR CAA 90 bp AGCTGCAGGTACTATAGACAGTGTATTCCCATTAGTACAGAAAGAAAAAGTATCCCCAGGATGATGCCCTaGGAGGCACCCGAGTGCACA +
Preference number: 5 (lower is better)
Translates to: SCRYYRQCIPISTERKSIPRMMP*EAPECT
Trigger: TGTGCACTCGGGTGCCTCCAAGGGCATCATCCTGGG...GATACTTTTTCTTTCTGTACTAATGGGAATACACTGTCTATAGTACCTGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 90 bp AAACAACAAAAACACACACACGGACTTTCCAGAGCCCTGCAGTTTTaGGCTTCAGGGACAACAGTGAACATTTATCGATCCCATGGTTCT +
Preference number: 5 (lower is better)
Translates to: KQQKHTHGLSRALQF*ASGTTVNIYRSHGS
Trigger: AGAACCATGGGATCGATAAATGTTCACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCTGGAAAGTCCGTGTGTGTGTTTTTGTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 90 bp TTTCCTATTATCATCATGACCCACATTTCAGAGGAGTTGGAGGCATaGAAAGAGGAAACAACTTGCCCGTTCCCTCTCCGTGCTATAATT +
Preference number: 5 (lower is better)
Translates to: FPIIIMTHISEELEA*KEETTCPFPLRAII
Trigger: AATTATAGCACGGAGAGGGAACGGGCAAGTTGTTTCCTCTTTCCATGCCTCCAACTCCTCTGAAATGTGGGTCATGATGATAATAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 90 bp TCTGCTACCTGTGCTAAAAGGTATCCTAAGAGAGGTACACCATGCTaGAATAGGCAAAAGCAAACCTGTTTCTTGTATCTTAGTAACACA +
Preference number: 5 (lower is better)
Translates to: SATCAKRYPKRGTPC*NRQKQTCFLYLSNT
Trigger: TGTGTTACTAAGATACAAGAAACAGGTTTGCTTTTGCCTATTCCAGCATGGTGTACCTCTCTTAGGATACCTTTTAGCACAGGTAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 72 bp CGCTGCGCGCAGCCAGGGGCCAACGAGAGCCGACGCTaGGCGGGCAGCGTCCGGGAGCCCCTCCGACCCTGC +
Preference number: 6 (lower is better)
Translates to: RCAQPGANESRR*AGSVREPLRPC
Trigger: GCAGGGTCGGAGGGGCTCCCGGACGCTGCCCGCCCAGCGTCGGCTCTCGTTGGCCCCTGGCTGCGCGCAGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 72 bp GGAGCCCTCACGCTGGCAGCGGGCACCGCAGGGCCCTaGGAGTCGGGCCCGCTGCGCGCAGCCAGGGGCCAA +
Preference number: 6 (lower is better)
Translates to: GALTLAAGTAGP*ESGPLRAARGQ
Trigger: TTGGCCCCTGGCTGCGCGCAGCGGGCCCGACTCTCAGGGCCCTGCGGTGCCCGCTGCCAGCGTGAGGGCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 72 bp CGGGAAGCATCTCGCTCGTTCGTCTCGCGCGCCGCGTaGCCGGAGCCCTCACGCTGGCAGCGGGCACCGCAG +
Preference number: 6 (lower is better)
Translates to: REASRSFVSRAA*PEPSRWQRAPQ
Trigger: CTGCGGTGCCCGCTGCCAGCGTGAGGGCTCCGGTCACGCGGCGCGCGAGACGAACGAGCGAGATGCTTCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 72 bp CAGCGTTTCCAGAACGCAGTCGTGCTGGGCTCCAGGTaGGCTTTGGGAGGAGCCCCGGCTGAGCCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: QRFQNAVVLGSR*ALGGAPAEPLH
Trigger: GTGCAGGGGCTCAGCCGGGGCTCCTCCCAAAGCTCACCTGGAGCCCAGCACGACTGCGTTCTGGAAACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 72 bp ACCCGTCTGCCCACCTGCACCATCCTCCTGTCCCTCTaGAAGGGGCCTCCTTGGCGCCTTGGACGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: TRLPTCTILLSL*KGPPWRLGRQS
Trigger: GCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCAGGTGGGCAGACGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS CCA 72 bp CCTCCTGTCCCTCTGGAAGGGGCCTCCTTGGCGCCTTaGACGTCAGAGCCCAGCTTCAGAGCTGGCCTTACC +
Preference number: 6 (lower is better)
Translates to: PPVPLEGASLAP*TSEPSFRAGLT
Trigger: GGTAAGGCCAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS CAA 90 bp CCTGCACCATCCTCCTGTCCCTCTGGAAGGGGCCTCCTTGGCGCCTaGGACGTCAGAGCCCAGCTTCAGAGCTGGCCTTACCAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: PAPSSCPSGRGLLGA*DVRAQLQSWPYQPV
Trigger: GACAGGCTGGTAAGGCCAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS CAA 90 bp TCTGCCCACCTGCACCATCCTCCTGTCCCTCTGGAAGGGGCCTCCTaGGCGCCTTGGACGTCAGAGCCCAGCTTCAGAGCTGGCCTTACC +
Preference number: 6 (lower is better)
Translates to: SAHLHHPPVPLEGAS*APWTSEPSFRAGLT
Trigger: GGTAAGGCCAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCAGGTGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS CCA 72 bp TGCACCATCCTCCTGTCCCTCTGGAAGGGGCCTCCTTaGCGCCTTGGACGTCAGAGCCCAGCTTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: CTILLSLWKGPP*RLGRQSPASEL
Trigger: CAGCTCTGAAGCTGGGCTCTGACGTCCAAGGCGCCAAGGAGGCCCCTTCCAGAGGGACAGGAGGATGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS CCA 72 bp GCTGTCAAACACAGCGTTTCCAGAACGCAGTCGTGCTaGGCTCCAGGTGAGCTTTGGGAGGAGCCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: AVKHSVSRTQSC*APGELWEEPRL
Trigger: CAGCCGGGGCTCCTCCCAAAGCTCACCTGGAGCCCAGCACGACTGCGTTCTGGAAACGCTGTGTTTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 72 bp TGCACGGCAGGCAGCGCTGAGCTCCCAGGCTCCGCATaGCTACTAAACAGTGCTGGTCAGCGCACTGTCAGG +
Preference number: 6 (lower is better)
Translates to: CTAGSAELPGSA*LLNSAGQRTVR
Trigger: CCTGACAGTGCGCTGACCAGCACTGTTTAGTAGCAATGCGGAGCCTGGGAGCTCAGCGCTGCCTGCCGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS GCA 72 bp CCATGCATCCACCAAGGCGGATGCGCTGTGTCCCTCTaGATCAGCCTGCTGAGTCCTCCTGGACCTGATGAG +
Preference number: 6 (lower is better)
Translates to: PCIHQGGCAVSL*ISLLSPPGPDE
Trigger: CTCATCAGGTCCAGGAGGACTCAGCAGGCTGATGCAGAGGGACACAGCGCATCCGCCTTGGTGGATGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 90 bp ACTGGGACCTGCACGGCAGGCAGCGCTGAGCTCCCAGGCTCCGCATaGCTACTAAACAGTGCTGGTCAGCGCACTGTCAGGACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: TGTCTAGSAELPGSA*LLNSAGQRTVRTGK
Trigger: TTTTCCTGTCCTGACAGTGCGCTGACCAGCACTGTTTAGTAGCAATGCGGAGCCTGGGAGCTCAGCGCTGCCTGCCGTGCAGGTCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS TCA 72 bp ATCTGTCACTACTGGGACCTGCACGGCAGGCAGCGCTaGGCTCCCAGGCTCCGCATTGCTACTAAACAGTGC +
Preference number: 6 (lower is better)
Translates to: ICHYWDLHGRQR*APRLRIATKQC
Trigger: GCACTGTTTAGTAGCAATGCGGAGCCTGGGAGCTCAGCGCTGCCTGCCGTGCAGGTCCCAGTAGTGACAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS TCA 72 bp AACGGCACCCCCTCAAAGGCTGCGGTGAGGACAGGCTaGCGACAGGCGCGCAGCGTAAGAATCAGAATACCA +
Preference number: 6 (lower is better)
Translates to: NGTPSKAAVRTG*RQARSVRIRIP
Trigger: TGGTATTCTGATTCTTACGCTGCGCGCCTGTCGTCAGCCTGTCCTCACCGCAGCCTTTGAGGGGGTGCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492488.5
CDS TCA 72 bp AAGGCGGATGCGCTGTGTCCCTCTGCATCAGCCTGCTaGGTCCTCCTGGACCTGATGAGAGACAGTACCGCA +
Preference number: 6 (lower is better)
Translates to: KADALCPSASAC*VLLDLMRDSTA
Trigger: TGCGGTACTGTCTCTCATCAGGTCCAGGAGGACTCAGCAGGCTGATGCAGAGGGACACAGCGCATCCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 72 bp GTTCTGGATCTTCTGCAGGCGCTCCACGCGCTGGTCTaGAGACAGCGTCTTCACCGTGGAGATGTACTCTGC +
Preference number: 6 (lower is better)
Translates to: VLDLLQALHALV*RQRLHRGDVLC
Trigger: GCAGAGTACATCTCCACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000484145.1
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
ENST00000636051.1
CDS TCA 72 bp TTTCCATCTCCAGTTTCACAGCCGTGGCGAAGGGTGTaGAGCACTGTAGCCTGCCCTCTCTGGCGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: FPSPVSQPWRRV*STVACPLWRFP
Trigger: GGGAAAGCGCCAGAGAGGGCAGGCTACAGTGCTTCACACCCTTCGCCACGGCTGTGAAACTGGAGATGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474238.1
CDS CCA 72 bp AGGCCACAGTGGATCTTCCTGTGTTTGCAGAGGTGCTaGCTGTTCCTGAGGTCTCTGAAGCTGGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RPQWIFLCLQRC*LFLRSLKLGRA
Trigger: GGCTCTGCCCAGCTTCAGAGACCTCAGGAACAGCCAGCACCTCTGCAAACACAGGAAGATCCACTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS CAA 72 bp GCTTCAGAGCTGGCCTTACCAGCCTGTCTCGACGTCTaGCAATGGGACAGGAGCAGCACTGCCACCTTGAGA +
Preference number: 6 (lower is better)
Translates to: ASELALPACLDV*QWDRSSTATLR
Trigger: TCTCAAGGTGGCAGTGCTGCTCCTGTCCCATTGCAAGACGTCGAGACAGGCTGGTAAGGCCAGCTCTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482774.5
ENST00000636051.1
CDS TCA 72 bp GGTTTCACCATGTTAGCCAGGATGGTCTCGATCTGCTaGCCTTGTGATCCGCCCGCCTCGGTCTCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: GFTMLARMVSIC*PCDPPASVSQS
Trigger: ACTTTGGGAGACCGAGGCGGGCGGATCACAAGGTCAGCAGATCGAGACCATCCTGGCTAACATGGTGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433036.1
CDS CAA 90 bp GAAGACTCAGAACGCTGTTGCCACCTCCTTTGTGCTTCTTTTTCTTaGGTGTGTCTTCCTCTGATGTCCTCCTGCCTCGGCCCCGGGACC +
Preference number: 6 (lower is better)
Translates to: EDSERCCHLLCASFS*VCLPLMSSCLGPGT
Trigger: GGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGACACACCAAAGAAAAAGAAGCACAAAGGAGGTGGCAACAGCGTTCTGAGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482774.5
ENST00000489509.1
ENST00000636051.1
CDS TCA 72 bp CATTGCTCCTGGACAGACAGTGCTGGAAATCAGGCCTaGGGCTGTCAGTGGCAGTACGAAGGACACTGGATG +
Preference number: 6 (lower is better)
Translates to: HCSWTDSAGNQA*GCQWQYEGHWM
Trigger: CATCCAGTGTCCTTCGTACTGCCACTGACAGCCTCAGGCCTGATTTCCAGCACTGTCTGTCCAGGAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433036.1
ENST00000636051.1
CDS TCA 72 bp CCCCAGTGCCTGCATTCCTTATGCCTAGCATACCCTTaGGAAACAGCACTGGGTGAGGAAGAGACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PQCLHSLCLAYP*ETALGEEETRR
Trigger: CCTCCTGGTCTCTTCCTCACCCAGTGCTGTTTCTCAAGGGTATGCTAGGCATAAGGAATGCAGGCACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS TCA 72 bp TCTCGATACCTATCAGGCCTCCAGAGTCTCGTGGAGTaGCTCTTGCTCCCATTGCTCCTGGACAGACAGTGC +
Preference number: 6 (lower is better)
Translates to: SRYLSGLQSLVE*LLLPLLLDRQC
Trigger: GCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGGTATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 72 bp ATGAGGCCACAGTGGATCTTCCTGTGTTTGCAGAGGTaGTGGCTGTTCCTGAGGTCTCTGAAGCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: MRPQWIFLCLQR*WLFLRSLKLGR
Trigger: TCTGCCCAGCTTCAGAGACCTCAGGAACAGCCAGCACCTCTGCAAACACAGGAAGATCCACTGTGGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489509.1
CDS GCA 72 bp CAGCGTAAGAATCAGAATACCACCCGGCACACGGGGTaGACTTCACTCGGGTCAGCTTCCATCAGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: QRKNQNTTRHTG*TSLGSASISVP
Trigger: AGGAACACTGATGGAAGCTGACCCGAGTGAAGTGCACCCCGTGTGCCGGGTGGTATTCTGATTCTTACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492488.5
CDS CAA 72 bp CGCCCTCCGGAGCTTTCAAAATCACTGCCCTCCATCTaGTCCTTCAGATCTGCTTCAAAGCGCGCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: RPPELSKSLPSI*SFRSASKRARS
Trigger: AGACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCTCCGGAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
ENST00000636051.1
CDS TCA 72 bp CTCTGGTCCAGCTCTCGCATCAGCTGGAAGTTCCTCTaGAGTTCGCAGGGAAGGTTCTCGATACTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: LWSSSRISWKFL*SSQGRFSILSR
Trigger: TCTGGACAGTATCGAGAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCTGATGCGAGAGCTGGACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
CDS TCA 72 bp CTCTGGTCCAGCTCTCGCATCAGCTGGAAGTTCCTCTaGAGTTCGCAGGGAAGGTTCTCGATACCTATCAGG +
Preference number: 6 (lower is better)
Translates to: LWSSSRISWKFL*SSQGRFSIPIR
Trigger: CCTGATAGGTATCGAGAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCTGATGCGAGAGCTGGACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 72 bp GCATGGCCAGCTGCACTTTGTCGTCACTGTATTCCTTaGACTTGCTGTAGGCGTTCTGGATCTTCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: AWPAALCRHCIP*TCCRRSGSSAG
Trigger: GCCTGCAGAAGATCCAGAACGCCTACAGCAAGTGCAAGGAATACAGTGACGACAAAGTGCAGCTGGCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000484145.1
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
ENST00000636051.1
CDS GCA 72 bp GTCTATCAGGCCTCCAGAGTCTCGTGGAGTGACTCTTaGTCCCATTGCTCCTGGACAGACAGTGCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: VYQASRVSWSDS*SHCSWTDSAGN
Trigger: ATTTCCAGCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433036.1
CDS GCA 72 bp ACCTATCAGGCCTCCAGAGTCTCGTGGAGTGACTCTTaGTCCCATTGCTCCTGGACAGACAGTGCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: TYQASRVSWSDS*SHCSWTDSAGN
Trigger: ATTTCCAGCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CCA 72 bp AAGGTTCTCGATACCTATCAGGCCTCCAGAGTCTCGTaGAGTGACTCTTGCTCCCATTGCTCCTGGACAGAC +
Preference number: 6 (lower is better)
Translates to: KVLDTYQASRVS*SDSCSHCSWTD
Trigger: GTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGGTATCGAGAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 90 bp TTTAACCCTCGCCCTCCGGAGCTTTCAAAATCACTGCCCTCCATCTaGTCCTTCAGATCTGCTTCAAAGCGCGCCAGGTCTGCATCAAGC +
Preference number: 6 (lower is better)
Translates to: FNPRPPELSKSLPSI*SFRSASKRARSASS
Trigger: GCTTGATGCAGACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCTCCGGAGGGCGAGGGTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
ENST00000636051.1
CDS TCA 72 bp GTATTTTGTCTATCAGGCCTCCAGAGTCTCGTGGAGTaGCTCTTGCTCCCATTGCTCCTGGACAGACAGTGC +
Preference number: 6 (lower is better)
Translates to: VFCLSGLQSLVE*LLLPLLLDRQC
Trigger: GCACTGTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGACAAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433036.1
CDS GCA 72 bp GGGGGAAAAGCTAGCCCTGCACAAGACACCATGATGTaGTCACCAGACTGGCAACAACTAAAGTCAGCCAAC +
Preference number: 6 (lower is better)
Translates to: GGKASPAQDTMM*SPDWQQLKSAN
Trigger: GTTGGCTGACTTTAGTTGTTGCCAGTCTGGTGAGCACATCATGGTGTCTTGTGCAGGGCTAGCTTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484145.1
CDS CCA 72 bp CGCTTCAGGGACAACAGTGAACATTTATCGATCCCATaGTTCTCCTACAATTGCCACGTGGCCAGCGTCTAC +
Preference number: 6 (lower is better)
Translates to: RFRDNSEHLSIP*FSYNCHVASVY
Trigger: GTAGACGCTGGCCACGTGGCAATTGTAGGAGAACCATGGGATCGATAAATGTTCACTGTTGTCCCTGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 72 bp GGAAATATTGCGACACGAATGAAGGGACAGATTAACTaGCTCCTCGGATCCGGGCACACAGCTCCTCCTACT +
Preference number: 6 (lower is better)
Translates to: GNIATRMKGQIN*LLGSGHTAPPT
Trigger: AGTAGGAGGAGCTGTGTGCCCGGATCCGAGGAGCAAGTTAATCTGTCCCTTCATTCGTGTCGCAATATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS CCA 72 bp TTCATGTATTTTGTCTATCAGGCCTCCAGAGTCTCGTaGAGTGACTCTTGCTCCCATTGCTCCTGGACAGAC +
Preference number: 6 (lower is better)
Translates to: FMYFVYQASRVS*SDSCSHCSWTD
Trigger: GTCTGTCCAGGAGCAATGGGAGCAAGAGTCACTCCACGAGACTCTGGAGGCCTGATAGACAAAATACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433036.1
CDS CCA 72 bp ATCATCATGACCCACATTTCAGAGGAGTTGGAGGCATaGAAAGAGGAAACAACTTGCCCGTTCCCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: IIMTHISEELEA*KEETTCPFPLR
Trigger: ACGGAGAGGGAACGGGCAAGTTGTTTCCTCTTTCCATGCCTCCAACTCCTCTGAAATGTGGGTCATGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 90 bp AAAAGGAAGGGAAATATTGCGACACGAATGAAGGGACAGATTAACTaGCTCCTCGGATCCGGGCACACAGCTCCTCCTACTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: KRKGNIATRMKGQIN*LLGSGHTAPPTSSS
Trigger: GGAAGAAGAAGTAGGAGGAGCTGTGTGCCCGGATCCGAGGAGCAAGTTAATCTGTCCCTTCATTCGTGTCGCAATATTTCCCTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313552.11
CDS TCA 72 bp CCAGAGCCCTGCAGTTTTGCGCTTCAGGGACAACAGTaGACATTTATCGATCCCATGGTTCTCCTACAATTG +
Preference number: 6 (lower is better)
Translates to: PEPCSFALQGQQ*TFIDPMVLLQL
Trigger: CAATTGTAGGAGAACCATGGGATCGATAAATGTTCACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 72 bp TTTTTAACCCTCGCCCTCCGGAGCTTTCAAAATCACTaGCCTCCATCTTGTCCTTCAGATCTGCTTCAAAGC +
Preference number: 6 (lower is better)
Translates to: FLTLALRSFQNH*PPSCPSDLLQS
Trigger: GCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCTCCGGAGGGCGAGGGTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313552.11
ENST00000406941.5
ENST00000445620.5
ENST00000482774.5
ENST00000489509.1
ENST00000492488.5
ENST00000493261.5
ENST00000636051.1
CDS CAA 90 bp TCAGTGTTCCTACATCCGGGATACAGGCTATGGGTATTCGTTCTTTaGGGAAAAAGAGGGGAAAGCCTCTTACCCTCCTTTGTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: SVFLHPGYRLWVFVL*GKRGESLLPSFVLL
Trigger: AAGAAGCACAAAGGAGGGTAAGAGGCTTTCCCCTCTTTTTCCCAAAAGAACGAATACCCATAGCCTGTATCCCGGATGTAGGAACACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492488.5
CDS CAA 90 bp GAGACAGTTTTTCCTATTATCATCATGACCCACATTTCAGAGGAGTaGGAGGCATGGAAAGAGGAAACAACTTGCCCGTTCCCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: ETVFPIIIMTHISEE*EAWKEETTCPFPLR
Trigger: ACGGAGAGGGAACGGGCAAGTTGTTTCCTCTTTCCATGCCTCCAACTCCTCTGAAATGTGGGTCATGATGATAATAGGAAAAACTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 72 bp AAAACACACACACGGACTTTCCAGAGCCCTGCAGTTTaGCGCTTCAGGGACAACAGTGAACATTTATCGATC +
Preference number: 6 (lower is better)
Translates to: KTHTRTFQSPAV*RFRDNSEHLSI
Trigger: GATCGATAAATGTTCACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCTGGAAAGTCCGTGTGTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 72 bp TGTATCTTAGTAACACACTTCAAGGTGCTTATGTGCTaGAGCAATTCCTGCAGTCAAATGGGCCCTCCACCC +
Preference number: 6 (lower is better)
Translates to: CILVTHFKVLMC*SNSCSQMGPPP
Trigger: GGGTGGAGGGCCCATTTGACTGCAGGAATTGCTCAAGCACATAAGCACCTTGAAGTGTGTTACTAAGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 90 bp AAAACAACAAAAACACACACACGGACTTTCCAGAGCCCTGCAGTTTaGCGCTTCAGGGACAACAGTGAACATTTATCGATCCCATGGTTC +
Preference number: 6 (lower is better)
Translates to: KTTKTHTRTFQSPAV*RFRDNSEHLSIPWF
Trigger: GAACCATGGGATCGATAAATGTTCACTGTTGTCCCTGAAGCGCAAAACTGCAGGGCTCTGGAAAGTCCGTGTGTGTGTTTTTGTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS GCA 72 bp TCTTGTATCTTAGTAACACACTTCAAGGTGCTTATGTaGTTGAGCAATTCCTGCAGTCAAATGGGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: SCILVTHFKVLM*LSNSCSQMGPP
Trigger: TGGAGGGCCCATTTGACTGCAGGAATTGCTCAAGCACATAAGCACCTTGAAGTGTGTTACTAAGATACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS TCA 72 bp TCTCTATGGCAGAGACAGTTTTTCCTATTATCATCATaGCCCACATTTCAGAGGAGTTGGAGGCATGGAAAG +
Preference number: 6 (lower is better)
Translates to: SLWQRQFFLLSS*PTFQRSWRHGK
Trigger: CTTTCCATGCCTCCAACTCCTCTGAAATGTGGGTCATGATGATAATAGGAAAAACTGTCTCTGCCATAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636051.1
CDS CAA 90 bp AAGAGAGGTACACCATGCTGGAATAGGCAAAAGCAAACCTGTTTCTaGTATCTTAGTAACACACTTCAAGGTGCTTATGTGCTTGAGCAA +
Preference number: 6 (lower is better)
Translates to: KRGTPCWNRQKQTCF*YLSNTLQGAYVLEQ
Trigger: TTGCTCAAGCACATAAGCACCTTGAAGTGTGTTACTAAGATACAAGAAACAGGTTTGCTTTTGCCTATTCCAGCATGGTGTACCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636051.1