RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ING3 (Homo sapiens)

Ensembl gene IDs: ENSG00000071243

Ensembl transcript IDs: ENST00000315870.10, ENST00000339121.9, ENST00000427726.5, ENST00000431467.1, ENST00000445699.5

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCTCTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTaGCTTTTGGTGCCTCTGTCAATCCAACGCAGCCATAATGGAACC +
Preference number: 1 (lower is better)
Translates to: CLFSSLQQCTVDSTI*LLVPLSIQRSHNGT
Trigger: GGTTCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR GCA 90 bp CTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTTTGGTaGCTCTGTCAATCCAACGCAGCCATAATGGAACCATTCTATAGG +
Preference number: 1 (lower is better)
Translates to: LHCSSALWTVPFAFW*LCQSNAAIMEPFYR
Trigger: CCTATAGAATGGTTCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CCA 90 bp TCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTTTaGTGCCTCTGTCAATCCAACGCAGCCATAATGGAACCATTCTAT +
Preference number: 1 (lower is better)
Translates to: SLHCSSALWTVPFAF*CLCQSNAAIMEPFY
Trigger: ATAGAATGGTTCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CCA 90 bp TGTATAATCAGACTGTGGCAGCTCAGAATCATGGGATCTCAAAGGTaGAAGAGATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGG +
Preference number: 1 (lower is better)
Translates to: CIIRLWQLRIMGSQR*KRSLKSPIYLTPFG
Trigger: CCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGATCTCTTCCACCTTTGAGATCCCATGATTCTGAGCTGCCACAGTCTGATTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR TCA 90 bp ACACTCCATAGCAGTAAGGCCTCAATTTTCACCACCTGTGAACTGTaGACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTT +
Preference number: 1 (lower is better)
Translates to: TLHSSKASIFTTCEL*THIWIFCPNCYMSF
Trigger: AAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCACAGTTCACAGGTGGTGAAAATTGAGGCCTTACTGCTATGGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR TCA 90 bp GTATCGAGGTTCATTTGGGTCGTAAGTCCAATCAACCTGACTATTTaGATCAGATTCTGGCACTACAGTTGTTTGTTGAGAGATTTCTTG +
Preference number: 1 (lower is better)
Translates to: VSRFIWVVSPINLTI*IRFWHYSCLLRDFL
Trigger: CAAGAAATCTCTCAACAAACAACTGTAGTGCCAGAATCTGATTCAAATAGTCAGGTTGATTGGACTTACGACCCAAATGAACCTCGATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR GCA 90 bp TGCTCTTTCGACCACTCCGTGAGTCGGCTGCTGATGAACTGGCATTCTGTGTTACTGGAGTACAGTACATaGAGCAGAATATACCTGTTG +
Preference number: 2 (lower is better)
Translates to: CSFDHSVSRLLMNWHSVLLEYST*SRIYLL
Trigger: CAACAGGTATATTCTGCTGCATGTACTGTACTCCAG...TAACACAGAATGCCAGTTCATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR GCA 90 bp TCTGCTGCCTCTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCACTTGTTGTTGTTTTTaGTCTTTCGACCACTCCGTG +
Preference number: 2 (lower is better)
Translates to: SAASSLHCSSALWTVPFATCCCF*SFDHSV
Trigger: CACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGT...GGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CAA 90 bp TTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTTaGGTGCCTCTGTCAATCCAACGCAGCCATAATGGAACCATTCTA +
Preference number: 2 (lower is better)
Translates to: FSSLQQCTVDSTICL*VPLSIQRSHNGTIL
Trigger: TAGAATGGTTCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR GCA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTAACTGCTTGAGCAGCTaGCATGGTAATTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: RMPITLRKWLRSTNVCICNCLSS*HGNCPC
Trigger: GCAGGGGCAATTACCATGGCAGCTGCTCAAGCAGTT...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR TCA 90 bp ATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGGTAGCACTGCATAGATTTGCATATGTTGGCCACTaGAATAATCCAAGGCTAACT +
Preference number: 2 (lower is better)
Translates to: IFEIPYLPHTLWVALHRFAYVGH*NNPRLT
Trigger: AGTTAGCCTTGGATTATTTCAGTGGCCAACATATGC...AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR GCA 90 bp TTACCTACAGGAGTTTCTGTTTATGTACCCAGGTACTCTAGAGGATACCAGCCCAATCCTTTAAGTGGTTaGCTGGAAATGCATTGTTTC +
Preference number: 2 (lower is better)
Translates to: LPTGVSVYVPRYSRGYQPNPLSG*LEMHCF
Trigger: GAAACAATGCATTTCCAGGCAACCACTTAAAGGATT...GGGCTGGTATCCTCTAGAGTACCTGGGTACATAAACAGAAACTCCTGTAGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR TCA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAGAAGTTAGCCAAAAGTaGGCATGTGTTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPEVSQK*ACVFCF
Trigger: AAAGCAGAAAACACATGCTCACTTTTGGCTAACTTC...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR TCA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCATTCAGAATAACTCTATaGACAAAAGAGCCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPFRITL*TKEPRL
Trigger: CAACCTGGGCTCTTTTGTTCATAGAGTTATTCTGAA...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR TCA 90 bp TGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGAATATACCTGTTGAATTTCCACTGGAGTATGTaGATGAGCATGGTGATTGTT +
Preference number: 2 (lower is better)
Translates to: CYITALEYSTCSRIYLLNFHWSM*MSMVIV
Trigger: AACAATCACCATGCTCATTCACATACTCCAGTGGAA...ATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR GCA 90 bp GAGGAGGAAGATGATGACTGCTGGCTTGAAGACTTGTTGTTGTTTTTGCTCTTTAATCCTTTAAGTGGTTaGCTGGAAATGCATTGTTTC +
Preference number: 2 (lower is better)
Translates to: EEEDDDCWLEDLLLFLLFNPLSG*LEMHCF
Trigger: GAAACAATGCATTTCCAGGCAACCACTTAAAGGATT...AAAGAGCAAAAACAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTCCTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR GCA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCAAGGAGTACAAATGTCTaGATATGTTGGCCACTGAAA +
Preference number: 2 (lower is better)
Translates to: PITLRKWLRSTNVCICWPRSTNV*ICWPLK
Trigger: TTTCAGTGGCCAACATATGCAGACATTTGTACTCCT...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
3UTR-3UTR CCA 90 bp TGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGAATATACCTGTTGAATGAAGATGATGACTGCTaGCTTGAAGACTTGTTGTTG +
Preference number: 2 (lower is better)
Translates to: CYITALEYSTCSRIYLLNEDDDC*LEDLLL
Trigger: CAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTC...ATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CAA 90 bp AGTATCGAGGTTCATTTGGGTCGTAAGTCCAATCAACCTGACTATTaGAATCAGATTCTGGCACTACAGTTGTTTGTTGAGAGATTTCTT +
Preference number: 2 (lower is better)
Translates to: SIEVHLGRKSNQPDY*NQILALQLFVERFL
Trigger: AAGAAATCTCTCAACAAACAACTGTAGTGCCAGAATCTGATTCAAATAGTCAGGTTGATTGGACTTACGACCCAAATGAACCTCGATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR TCA 90 bp CACCATGAACATTTTGATATACACTCCATAGCAGTAAGGCCTCAATTTTCACCAATAACAGGATGTTCCTaGCTCAGACAAAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: HHEHFDIHSIAVRPQFSPITGCS*LRQRTF
Trigger: GAAAGTTCTTTGTCTGAGTCAGGAACATCCTGTTAT...TGGTGAAAATTGAGGCCTTACTGCTATGGAGTGTATATCAAAATGTTCATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR TCA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCTTCCATGGCTCTACATaGCACATTTTCAAGTTTGTG +
Preference number: 2 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVFHGST*HIFKFV
Trigger: CACAAACTTGAAAATGTGTCATGTAGAGCCATGGAA...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR GCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGTCTTCATTGCAGCAGTaGACTGTGGACAGTACCATT +
Preference number: 2 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLSSLQQ*TVDSTI
Trigger: AATGGTACTGTCCACAGTGCACTGCTGCAATGAAGA...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR TCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGCATATGTTGGCCACTaGAATAATCCAAGGCTAACT +
Preference number: 2 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLAYVGH*NNPRLT
Trigger: AGTTAGCCTTGGATTATTTCAGTGGCCAACATATGC...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
3UTR-3UTR TCA 90 bp AGACATTTTCCATGGCTCTACATGACACATTTTCAAGTTTGTGGTATAAGCATTTGTCCTGCTCACCAATaGCATTTTACTTACACGTAC +
Preference number: 2 (lower is better)
Translates to: RHFPWLYMTHFQVCGISICPAHQ*HFTYTY
Trigger: GTACGTGTAAGTAAAATGTCATTGGTGAGCAGGACA...AATGCTTATACCACAAACTTGAAAATGTGTCATGTAGAGCCATGGAAAATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR GCA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCGTGGTTGCCTGGAAATaGATTGTTTCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFVVAWK*IVSSFS
Trigger: AGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
3UTR-3UTR CCA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAACTAGACATTTTCCATaGCTCTACATGACACATTTT +
Preference number: 2 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPTRHFP*LYMTHF
Trigger: AAAATGTGTCATGTAGAGCCATGGAAAATGTCTAGT...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR CCA 90 bp ATTCTGGCACTACAGTTGTTTGTTGAGAGATTTCTTGTACAACAGTTGATGATGTGTAAATCCTTTAAGTaGTTGCCTGGAAATGCATTG +
Preference number: 2 (lower is better)
Translates to: ILALQLFVERFLVQQLMMCKSFK*LPGNAL
Trigger: CAATGCATTTCCAGGCAACCACTTAAAGGATTTACA...CATCATCAACTGTTGTACAAGAAATCTCTCAACAAACAACTGTAGTGCCAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CCA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCAATTCACACCATATGTaGTGTTCACCTTTTATCTTG +
Preference number: 2 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVNSHHM*CSPFIL
Trigger: CAAGATAAAAGGTGAACACCACATATGGTGTGAATT...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR GCA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCTTTTATCTTGTGTCCTaGTCACCAATGACATTTTAC +
Preference number: 2 (lower is better)
Translates to: ICTQERQHKYEIYTLKLAFYLVS*SPMTFY
Trigger: GTAAAATGTCATTGGTGAGCAGGACACAAGATAAAA...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR CCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGTGTAAATCCTTTAAGTaGTTGCCTGGAAATGCATTG +
Preference number: 2 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLCKSFK*LPGNAL
Trigger: CAATGCATTTCCAGGCAACCACTTAAAGGATTTACA...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
3UTR-3UTR CCA 90 bp GAGCCCAGGTTGTTAGCACCATTAAAATGTGTGTACTACATAAAAACAACTAGAAATTCACACCATATGTaGTGTTCACCTTTTATCTTG +
Preference number: 2 (lower is better)
Translates to: EPRLLAPLKCVYYIKTTRNSHHM*CSPFIL
Trigger: CAAGATAAAAGGTGAACACCACATATGGTGTGAATT...TCTAGTTGTTTTTATGTAGTACACACATTTTAATGGTGCTAACAACCTGGGCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR GCA 72 bp AGCAGTGCACTGTGGACAGTACCATTTGCCTTTTGGTaGCTCTGTCAATCCAACGCAGCCATAATGGAACCA +
Preference number: 3 (lower is better)
Translates to: SSALWTVPFAFW*LCQSNAAIMEP
Trigger: TGGTTCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR GCA 72 bp TCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTaGCTTTTGGTGCCTCTGTCAATCCAACGCAGCCAT +
Preference number: 3 (lower is better)
Translates to: SSLQQCTVDSTI*LLVPLSIQRSH
Trigger: ATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CCA 72 bp TCTGCTGCCTCTTCTCTTCATTGCAGCAGTGCACTGTaGACAGTACCATTTGCCTTTTGGTGCCTCTGTCAA +
Preference number: 3 (lower is better)
Translates to: SAASSLHCSSAL*TVPFAFWCLCQ
Trigger: TTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CAA 90 bp CGACCACTCCGTGAGTCGGCTGCTGATGAACTGGCATTCTGTGTTAATGTTGTCAGAATGCCCATTACTTaGAGAAAATGGTTGAGGAGT +
Preference number: 3 (lower is better)
Translates to: RPLRESAADELAFCVNVVRMPIT*RKWLRS
Trigger: ACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT...GACAACATTAACACAGAATGCCAGTTCATCAGCAGCCGACTCACGGAGTGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR GCA 72 bp CCCGCCCCCTCCCTCATGAACTGCACTCTATCTGGATaGAGAAACATAGAAAGACTAATGGCACAAATTACT +
Preference number: 3 (lower is better)
Translates to: PAPSLMNCTLSG*RNIERLMAQIT
Trigger: AGTAATTTGTGCCATTAGTCTTTCTATGTTTCTGCATCCAGATAGAGTGCAGTTCATGAGGGAGGGGGCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR TCA 72 bp TCAGAATCATGGGATCTCAAAGGTGGAAGAGATCTTTaGAATCCCCTATCTACCTCACACCCTTTGGGTAGC +
Preference number: 3 (lower is better)
Translates to: SESWDLKGGRDL*NPLSTSHPLGS
Trigger: GCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGATCTCTTCCACCTTTGAGATCCCATGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR CCA 72 bp AGACTGTGGCAGCTCAGAATCATGGGATCTCAAAGGTaGAAGAGATCTTTGAAATCCCCTATCTACCTCACA +
Preference number: 3 (lower is better)
Translates to: RLWQLRIMGSQR*KRSLKSPIYLT
Trigger: TGTGAGGTAGATAGGGGATTTCAAAGATCTCTTCCACCTTTGAGATCCCATGATTCTGAGCTGCCACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR CAA 90 bp ATAACGAGCCAATGTTATAGGATCCCAGAGGTTGGGAGGAATTCACATTGTAGGCAGGAATATGATCTGTaGTCGTATGGTGAGAAGTTG +
Preference number: 3 (lower is better)
Translates to: ITSQCYRIPEVGRNSHCRQEYDL*SYGEKL
Trigger: CAACTTCTCACCATACGACAACAGATCATATTCCTG...CCTACAATGTGAATTCCTCCCAACCTCTGGGATCCTATAACATTGGCTCGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CAA 90 bp TGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGAATATACCTGTTGAATTGTAGCCTGAACTGCTaGAGCAGCTGCCATGGTAAT +
Preference number: 3 (lower is better)
Translates to: CYITALEYSTCSRIYLLNCSLNC*SSCHGN
Trigger: ATTACCATGGCAGCTGCTCAAGCAGTTCAGGCTACA...ATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR TCA 72 bp GAAAGGGGATGTAGCAGCTGGATAACAGGATGTTCCTaGCTCAGACAAAGAACTTTCTCTTCAAATAAGGCT +
Preference number: 3 (lower is better)
Translates to: ERGCSSWITGCS*LRQRTFSSNKA
Trigger: AGCCTTATTTGAAGAGAAAGTTCTTTGTCTGAGTCAGGAACATCCTGTTATCCAGCTGCTACATCCCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR TCA 72 bp AGCAGTAAGGCCTCAATTTTCACCACCTGTGAACTGTaGACCCACATTTGGATATTTTGTCCCAACTGTTAC +
Preference number: 3 (lower is better)
Translates to: SSKASIFTTCEL*THIWIFCPNCY
Trigger: GTAACAGTTGGGACAAAATATCCAAATGTGGGTTCACAGTTCACAGGTGGTGAAAATTGAGGCCTTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR CAA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCATACCGCCGTATAGACTaGCTAAAATGTACAGTTCTC +
Preference number: 3 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPYRRID*LKCTVL
Trigger: GAGAACTGTACATTTTAGCAAGTCTATACGGCGGTA...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445699.5
3UTR-3UTR CAA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCGACTTGTTGTTGTTTTaGCTCTTTCGACCACTCCGT +
Preference number: 3 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFDLLLF*LFRPLR
Trigger: ACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTC...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CCA 72 bp CTTAGAATAAGATCTATTCTGCAGTCAGCATCACCCTaGTGTAGTAAGGCCCAGAGTGATACAAAATTTGAA +
Preference number: 3 (lower is better)
Translates to: LRIRSILQSASP*CSKAQSDTKFE
Trigger: TTCAAATTTTGTATCACTCTGGGCCTTACTACACCAGGGTGATGCTGACTGCAGAATAGATCTTATTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR CAA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCAACTGGCTTTTAAACTaGATGTTCTTCGTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFNWLLN*MFFVPP
Trigger: AGGAGGGACGAAGAACATCAAGTTTAAAAGCCAGTT...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CAA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTTCTATAGGGCAATCTaGGTTATCACATCCCACCAT +
Preference number: 3 (lower is better)
Translates to: RMPITLRKWLRSTNVCICFYRAI*VITSHH
Trigger: ATGGTGGGATGTGATAACCAAGATTGCCCTATAGAA...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CAA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGAGTACCATTTGCCTTTaGGTGCCTCTGTCAATCCAA +
Preference number: 3 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLSTICL*VPLSIQ
Trigger: TTGGATTGACAGAGGCACCAAAAGGCAAATGGTACT...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CAA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCACAAAAGAGCCCAGGTaGTTAGCACCATTAAAATGT +
Preference number: 3 (lower is better)
Translates to: ICTQERQHKYEIYTLKLATKEPR*LAPLKC
Trigger: ACATTTTAATGGTGCTAACAACCTGGGCTCTTTTGT...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
3UTR-3UTR CAA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTATGATGACTGCTGGCTaGAAGACTTGTTGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: RMPITLRKWLRSTNVCICMMTAG*KTCCCF
Trigger: AAAACAACAACAAGTCTTCAAGCCAGCAGTCATCAT...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR-3UTR CAA 90 bp GTGAACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTTGTACAACAAAATCCTTTAAGTGGTaGCCTGGAAATGCATTGTTT +
Preference number: 3 (lower is better)
Translates to: VNPHLDILSQLLHEFCTTKSFKW*PGNALF
Trigger: AAACAATGCATTTCCAGGCAACCACTTAAAGGATTT...TGTTGTACAAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR CAA 90 bp GTGAACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTTGTACAACATGTTTTCTAAGTGATTaGGTAAGGAGTGGAATTCAC +
Preference number: 3 (lower is better)
Translates to: VNPHLDILSQLLHEFCTTCFLSD*VRSGIH
Trigger: GTGAATTCCACTCCTTACCAAATCACTTAGAAAACA...TGTTGTACAAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315870.10
3UTR-3UTR CAA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCGTTTGTCATCTTGTATaGCTTAAACAACTGACACAG +
Preference number: 3 (lower is better)
Translates to: ICTQERQHKYEIYTLKLAVCHLV*LKQLTQ
Trigger: CTGTGTCAGTTGTTTAAGCAATACAAGATGACAAAC...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS-3UTR TCA 90 bp CGACCACTCCGTGAGTCGGCTGCTGATGAACTGGCATTCTGTGTTAATGTTGTCTCTCGCGCATTTCCGTaGAGCGGTCCCGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: RPLRESAADELAFCVNVVSRAFP*SGPADP
Trigger: TGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGA...GACAACATTAACACAGAATGCCAGTTCATCAGCAGCCGACTCACGGAGTGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CAA 72 bp CTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTaGCCTTTTGGTGCCTCTGTCAATCCAACGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFIAAVHCGQYH*PFGASVNPTQP
Trigger: TGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR GCA 90 bp AAGACTTGTTGTTGTTTTTGCTCTTTCGACCACTCCGTGAGTCGGCTGCTGATGAACTGCTTGAGCAGCTaGCATGGTAATTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KTCCCFCSFDHSVSRLLMNCLSS*HGNCPC
Trigger: GCAGGGGCAATTACCATGGCAGCTGCTCAAGCAGTT...CATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427726.5
3UTR CAA 72 bp TTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTTaGGTGCCTCTGTCAATCCAACGCAGCCATAATGGA +
Preference number: 4 (lower is better)
Translates to: LQQCTVDSTICL*VPLSIQRSHNG
Trigger: TCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR TCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCTCTCGCGCATTTCCGTaGAGCGGTCCCGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSSRAFP*SGPADP
Trigger: TGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGA...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR TCA 90 bp TACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAATCTCGCGCATTTCCGTaGAGCGGTCCCGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: YNSHHMWCSPFILCPAHQSRAFP*SGPADP
Trigger: TGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGA...TTGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp CTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTTTGGTGCCCCATTTGCCTTTTGGTaGCTCTGTCAATCCAACGCA +
Preference number: 4 (lower is better)
Translates to: LLFIAAVHCGQYHLPFGAPFAFW*LCQSNA
Trigger: TGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGG...GGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR GCA 90 bp CCTTCAGTCCCCCGCCCCCTCCCTCATGAACTGCACTCTATCTGGATGCAGAAAAATCCTTTAAGTGGTTaGCTGGAAATGCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSVPRPLPHELHSIWMQKNPLSG*LEMHCF
Trigger: GAAACAATGCATTTCCAGGCAACCACTTAAAGGATT...TTTCTGCATCCAGATAGAGTGCAGTTCATGAGGGAGGGGGCGGGGGACTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR GCA 90 bp TCTGCTGCCTCTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCCTGGAGTACAGTACATaGAGCAGAATATACCTGTTG +
Preference number: 4 (lower is better)
Translates to: SAASSLHCSSALWTVPFALEYST*SRIYLL
Trigger: CAACAGGTATATTCTGCTGCATGTACTGTACTCCAG...GGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR TCA 90 bp CTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTTTGGTGCCTTCCACTGGAGTATGTaGATGAGCATGGTGATTGTT +
Preference number: 4 (lower is better)
Translates to: LLFIAAVHCGQYHLPFGAFHWSM*MSMVIV
Trigger: AACAATCACCATGCTCATTCACATACTCCAGTGGAA...GGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR GCA 90 bp GGGGGTCTCTTTACTCTATTTGGCTACATTGCCTCCAGTCAAAACACCCATAACCCATTTGCCTTTTGGTaGCTCTGTCAATCCAACGCA +
Preference number: 4 (lower is better)
Translates to: GGLFTLFGYIASSQNTHNPFAFW*LCQSNA
Trigger: TGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGG...GTTATGGGTGTTTTGACTGGAGGCAATGTAGCCAAATAGAGTAAAGAGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGTCTCGCGCATTTCCGTaGAGCGGTCCCGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMSRAFP*SGPADP
Trigger: TGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGA...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCAAACTGCTTGAGCAGCTaGCATGGTAATTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PITLRKWLRSTNVCICWPNCLSS*HGNCPC
Trigger: GCAGGGGCAATTACCATGGCAGCTGCTCAAGCAGTT...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp ATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGGTAGCACTGCATAGATTTCCCTCCCTCATGAACTaGACTCTATCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: IFEIPYLPHTLWVALHRFPSLMN*TLSGCR
Trigger: TCTGCATCCAGATAGAGTGCAGTTCATGAGGGAGGG...AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTCCGCCCCCTCCCTCATaGACTGCACTCTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLPPPPS*TALYLD
Trigger: ATCCAGATAGAGTGCAGTTCATGAGGGAGGGGGCGG...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR GCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCATTGCATTCTGCACCTaGAGGTCCATCTCGCGCATT +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSIAFCT*RSISRI
Trigger: AATGCGCGAGATGGACCTGCAGGTGCAGAATGCAAT...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp ATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGGTAGCACTGCATAGATTTTTGATGGATGCCATTTaGTCTTCCCTCCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: IFEIPYLPHTLWVALHRFLMDAI*SSLHSG
Trigger: ACCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAA...AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CCA 90 bp ACAGTACCATTTGCCTTTTGGTGCCTCTGTCAATCCAACGCAGCCATAATGGAATCTATAGGGCAATCTTaGTTATCACATCCCACCATC +
Preference number: 4 (lower is better)
Translates to: TVPFAFWCLCQSNAAIMESIGQS*LSHPTI
Trigger: GATGGTGGGATGTGATAACCAAGATTGCCCTATAGA...TTCCATTATGGCTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CCA 90 bp TGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGAATATACCTGTTGAATCAGTCAGCATCACCCTaGTGTAGTAAGGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: CYITALEYSTCSRIYLLNQSASP*CSKAQS
Trigger: ACTCTGGGCCTTACTACACCAGGGTGATGCTGACTG...ATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCGCCCACATTATCACATaGACCATTTCCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSAHIIT*TISFSL
Trigger: CAGGCTGAAGGAAATGGTTCATGTGATAATGTGGGC...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR GCA 90 bp ATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGATTGCATTCTGCACCTaGAGGTCCATCTCGCGCATT +
Preference number: 4 (lower is better)
Translates to: MPITLRKWLRSTNVCICWIAFCT*RSISRI
Trigger: AATGCGCGAGATGGACCTGCAGGTGCAGAATGCAAT...CCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCATTGCATTCTGCACCTaGAGGTCCATCTCGCGCATT +
Preference number: 4 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVIAFCT*RSISRI
Trigger: AATGCGCGAGATGGACCTGCAGGTGCAGAATGCAAT...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCATTGATGGATGCCATTTaGTCTTCCCTCCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPLMDAI*SSLHSG
Trigger: ACCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAA...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCAGCTGTAGCCTGAACTaGTTGAGCAGCTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSSCSLN*LSSCHG
Trigger: ACCATGGCAGCTGCTCAAGCAGTTCAGGCTACAGCT...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCTGCAGCAGTGCACTGTaGACAGTACCATTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSCSSAL*TVPFAF
Trigger: AAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCA...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
3UTR CAA 72 bp ACAAATGAACCTAACTTGTTTAGGGAGCTGGTAGAGTaGTATAATCAGACTGTGGCAGCTCAGAATCATGGG +
Preference number: 4 (lower is better)
Translates to: TNEPNLFRELVE*YNQTVAAQNHG
Trigger: CCCATGATTCTGAGCTGCCACAGTCTGATTATACAACTCTACCAGCTCCCTAAACAAGTTAGGTTCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAAATCTGGTTTGCCAACTaGACCTTCTCATCTGCATCT +
Preference number: 4 (lower is better)
Translates to: YNSHHMWCSPFILCPAHQIWFAN*TFSSAS
Trigger: AGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGAT...TTGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR TCA 90 bp GAGGAGGAAGATGATGACTGCTGGCTTGAAGACTTGTTGTTGTTTTTGCTCTTTGCATATGTTGGCCACTaGAATAATCCAAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: EEEDDDCWLEDLLLFLLFAYVGH*NNPRLT
Trigger: AGTTAGCCTTGGATTATTTCAGTGGCCAACATATGC...AAAGAGCAAAAACAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTCCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR TCA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCAGGTGGAAGAGATCTTTaGAATCCCCTATCTACCTCA +
Preference number: 4 (lower is better)
Translates to: PITLRKWLRSTNVCICWPGGRDL*NPLSTS
Trigger: TGAGGTAGATAGGGGATTTCAAAGATCTCTTCCACC...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp ACATCAGAAACCACCTTACCGCCGTATAGACTTGCTAAAATGTACAGTTCTCACTGTCCTGCTCACCAATaGCATTTTACTTACACGTAC +
Preference number: 4 (lower is better)
Translates to: TSETTLPPYRLAKMYSSHCPAHQ*HFTYTY
Trigger: GTACGTGTAAGTAAAATGTCATTGGTGAGCAGGACA...GTGAGAACTGTACATTTTAGCAAGTCTATACGGCGGTAAGGTGGTTTCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS-3UTR GCA 90 bp GAGCCCAGGTTGTTAGCACCATTAAAATGTGTGTACTACATAAAAACAACTAGAATTGCATTCTGCACCTaGAGGTCCATCTCGCGCATT +
Preference number: 4 (lower is better)
Translates to: EPRLLAPLKCVYYIKTTRIAFCT*RSISRI
Trigger: AATGCGCGAGATGGACCTGCAGGTGCAGAATGCAAT...TCTAGTTGTTTTTATGTAGTACACACATTTTAATGGTGCTAACAACCTGGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCATTGCATTCTGCACCTaGAGGTCCATCTCGCGCATT +
Preference number: 4 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFIAFCT*RSISRI
Trigger: AATGCGCGAGATGGACCTGCAGGTGCAGAATGCAAT...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCTTGATGGATGCCATTTaGTCTTCCCTCCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVLMDAI*SSLHSG
Trigger: ACCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAA...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGAACTGCTTGAGCAGCTaGCATGGTAATTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLNCLSS*HGNCPC
Trigger: GCAGGGGCAATTACCATGGCAGCTGCTCAAGCAGTT...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGAGCTGTAGCCTGAACTaGTTGAGCAGCTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMSCSLN*LSSCHG
Trigger: ACCATGGCAGCTGCTCAAGCAGTTCAGGCTACAGCT...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGAATATACCTGTTGAATGTGGACAGTACCATTTaGCTTTTGGTGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CYITALEYSTCSRIYLLNVDSTI*LLVPLS
Trigger: TGACAGAGGCACCAAAAGGCAAATGGTACTGTCCAC...ATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCATCTTCATTGCAGCAGTaGACTGTGGACAGTACCATT +
Preference number: 4 (lower is better)
Translates to: PITLRKWLRSTNVCICWPSSLQQ*TVDSTI
Trigger: AATGGTACTGTCCACAGTGCACTGCTGCAATGAAGA...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp GTTGATGAGGTAGTTCCATGTTTGGCCCCATTATATATGACTCAGATATTAACAGCCTCTTCTCTTCATTaGAGCAGTGCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: VDEVVPCLAPLYMTQILTASSLH*SSALWT
Trigger: TGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGC...TGTTAATATCTGAGTCATATATAATGGGGCCAAACATGGAACTACCTCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR GCA 90 bp ATAACGAGCCAATGTTATAGGATCCCAGAGGTTGGGAGGAATTCACATTGTAGGTTTATTTGTGTCTGCTaGCTCTTCTCTTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: ITSQCYRIPEVGRNSHCRFICVC*LFSSLQ
Trigger: CTGCAATGAAGAGAAGAGGCAGCAGACACAAATAAA...CCTACAATGTGAATTCCTCCCAACCTCTGGGATCCTATAACATTGGCTCGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR GCA 90 bp ATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGGTAGCACTGCATAGATTTCTGGAGTACAGTACATaGAGCAGAATATACCTGTTG +
Preference number: 4 (lower is better)
Translates to: IFEIPYLPHTLWVALHRFLEYST*SRIYLL
Trigger: CAACAGGTATATTCTGCTGCATGTACTGTACTCCAG...AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CCA 90 bp GAGGAGGAAGATGATGACTGCTGGCTTGAAGACTTGTTGTTGTTTTTGCTCTTTGTATCGAGGTTCATTTaGGTCGTAAGTCCAATCAAC +
Preference number: 4 (lower is better)
Translates to: EEEDDDCWLEDLLLFLLFVSRFI*VVSPIN
Trigger: GTTGATTGGACTTACGACCCAAATGAACCTCGATAC...AAAGAGCAAAAACAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTCCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CCA 90 bp GGGGGTCTCTTTACTCTATTTGGCTACATTGCCTCCAGTCAAAACACCCATAACACTTACTATGCCCCTTaGTGTAAATGTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: GGLFTLFGYIASSQNTHNTYYAP*CKCHKE
Trigger: TTCTTTGTGACATTTACACCAAGGGGCATAGTAAGT...GTTATGGGTGTTTTGACTGGAGGCAATGTAGCCAAATAGAGTAAAGAGACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCACTCTTTGTTCTAGTTaGTCCATTGCATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSTLCSS*SIAFCT
Trigger: GGTGCAGAATGCAATGGATCAACTAGAACAAAGAGT...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR TCA 90 bp TGCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGAACTTAGCCAGTTCCTaGTCCAGCTTTCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: CNHLYTVLHNSSGVQYMQNLASS*SSFLKC
Trigger: ACACTTGAGAAAGCTGGATCAGGAACTGGCTAAGTT...CTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAATGTCCTGCTCACCAATaGCATTTTACTTACACGTAC +
Preference number: 4 (lower is better)
Translates to: YNSHHMWCSPFILCPAHQCPAHQ*HFTYTY
Trigger: GTACGTGTAAGTAAAATGTCATTGGTGAGCAGGACA...TTGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCTTGATGGATGCCATTTaGTCTTCCCTCCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVLMDAI*SSLHSG
Trigger: ACCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAA...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCACTTGTTGTTGTTTTTaGTCTTTCGACCACTCCGTG +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSTCCCF*SFDHSV
Trigger: CACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGT...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp GTGAACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTTGTACAACAGTGGACAGTACCATTTaGCTTTTGGTGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VNPHLDILSQLLHEFCTTVDSTI*LLVPLS
Trigger: TGACAGAGGCACCAAAAGGCAAATGGTACTGTCCAC...TGTTGTACAAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR GCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGGCCTCTTCTCTTCATTaGAGCAGTGCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMASSLH*SSALWT
Trigger: TGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGC...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGCCTCTTCTCTTCATTaGAGCAGTGCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLASSLH*SSALWT
Trigger: TGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGC...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCAGAAGATGATGACTGCTaGCTTGAAGACTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PITLRKWLRSTNVCICWPEDDDC*LEDLLL
Trigger: CAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTC...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCGTATCGAGGTTCATTTaGGTCGTAAGTCCAATCAAC +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSVSRFI*VVSPIN
Trigger: GTTGATTGGACTTACGACCCAAATGAACCTCGATAC...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CCA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCTGCAGCAGTGCACTGTaGACAGTACCATTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSCSSAL*TVPFAF
Trigger: AAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCA...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCTGTATAATCAGACTGTaGCAGCTCAGAATCATGGGA +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSCIIRL*QLRIMG
Trigger: TCCCATGATTCTGAGCTGCCACAGTCTGATTATACA...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp GTGAACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTTGTACAACAATCTGGTTTGCCAACTaGACCTTCTCATCTGCATCT +
Preference number: 4 (lower is better)
Translates to: VNPHLDILSQLLHEFCTTIWFAN*TFSSAS
Trigger: AGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGAT...TGTTGTACAAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTATCTGGTTTGCCAACTaGACCTTCTCATCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RMPITLRKWLRSTNVCICIWFAN*TFSSAS
Trigger: AGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGAT...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR TCA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCATCTGGTTTGCCAACTaGACCTTCTCATCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFIWFAN*TFSSAS
Trigger: AGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGAT...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR TCA 90 bp GAGCCCAGGTTGTTAGCACCATTAAAATGTGTGTACTACATAAAAACAACTAGAATCTGGTTTGCCAACTaGACCTTCTCATCTGCATCT +
Preference number: 4 (lower is better)
Translates to: EPRLLAPLKCVYYIKTTRIWFAN*TFSSAS
Trigger: AGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGAT...TCTAGTTGTTTTTATGTAGTACACACATTTTAATGGTGCTAACAACCTGGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR TCA 90 bp TGCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGAATTTTCACCACCTGTaGACTGTGAACCCACATTTG +
Preference number: 4 (lower is better)
Translates to: CNHLYTVLHNSSGVQYMQNFHHL*TVNPHL
Trigger: CAAATGTGGGTTCACAGTTCACAGGTGGTGAAAATT...CTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAATTCCATGGCTCTACATaGCACATTTTCAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: YNSHHMWCSPFILCPAHQFHGST*HIFKFV
Trigger: CACAAACTTGAAAATGTGTCATGTAGAGCCATGGAA...TTGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR TCA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCATTCCATGGCTCTACATaGCACATTTTCAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPFHGST*HIFKFV
Trigger: CACAAACTTGAAAATGTGTCATGTAGAGCCATGGAA...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAATTGATGGATGCCATTTaGTCTTCCCTCCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLELMDAI*SSLHSG
Trigger: ACCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAA...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGAATATACCTGTTGAATACTTGTTGTTGTTTTTaGTCTTTCGACCACTCCGTG +
Preference number: 4 (lower is better)
Translates to: CYITALEYSTCSRIYLLNTCCCF*SFDHSV
Trigger: CACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGT...ATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAACCATTTGCCTTTTGGTaGCTCTGTCAATCCAACGCA +
Preference number: 4 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEPFAFW*LCQSNA
Trigger: TGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGG...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGGTGGACAGTACCATTTaGCTTTTGGTGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMVDSTI*LLVPLS
Trigger: TGACAGAGGCACCAAAAGGCAAATGGTACTGTCCAC...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGTGCAGCAGTGCACTGTaGACAGTACCATTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLCSSAL*TVPFAF
Trigger: AAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCA...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCTCTCTTTACTCTATTTaGCTACATTGCCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ATIYIQCYITALEYSTCSSLYSI*LHCLQS
Trigger: TGACTGGAGGCAATGTAGCCAAATAGAGTAAAGAGA...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CCA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTCTACCTCACACCCTTTaGGTAGCACTGCATAGATTT +
Preference number: 4 (lower is better)
Translates to: RMPITLRKWLRSTNVCICLPHTL*VALHRF
Trigger: AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAG...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAAACTTAGCCAGTTCCTaGTCCAGCTTTCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLENLASS*SSFLKC
Trigger: ACACTTGAGAAAGCTGGATCAGGAACTGGCTAAGTT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000431467.1
CDS-3UTR TCA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCTTCCACTGGAGTATGTaGATGAGCATGGTGATTGTT +
Preference number: 4 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVFHWSM*MSMVIV
Trigger: AACAATCACCATGCTCATTCACATACTCCAGTGGAA...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR TCA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCACCACCTGTGAACTGTaGACCCACATTTGGATATTT +
Preference number: 4 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFTTCEL*THIWIF
Trigger: AAATATCCAAATGTGGGTTCACAGTTCACAGGTGGT...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCGAAGTTAGCCAAAAGTaGGCATGTGTTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVEVSQK*ACVFCF
Trigger: AAAGCAGAAAACACATGCTCACTTTTGGCTAACTTC...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGTCTTCATTGCAGCAGTaGACTGTGGACAGTACCATT +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMSSLQQ*TVDSTI
Trigger: AATGGTACTGTCCACAGTGCACTGCTGCAATGAAGA...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp AGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTCTTCATTGCAGCAGTaGACTGTGGACAGTACCATT +
Preference number: 4 (lower is better)
Translates to: RSYRIVYVNPLSGCLEMHSSLQQ*TVDSTI
Trigger: AATGGTACTGTCCACAGTGCACTGCTGCAATGAAGA...ATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCGAAGATGATGACTGCTaGCTTGAAGACTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSEDDDC*LEDLLL
Trigger: CAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTC...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCTCTATAGGGCAATCTTaGTTATCACATCCCACCATC +
Preference number: 4 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVSIGQS*LSHPTI
Trigger: GATGGTGGGATGTGATAACCAAGATTGCCCTATAGA...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTAGTTGGCCACATTTTTaGGGGGTTGATGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLSWPHF*GVDEVV
Trigger: AACTACCTCATCAACCCCCCAAAAATGTGGCCAACT...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CCA 90 bp ACATCAGAAACCACCTTACCGCCGTATAGACTTGCTAAAATGTACAGTTCTCACAATTCACACCATATGTaGTGTTCACCTTTTATCTTG +
Preference number: 4 (lower is better)
Translates to: TSETTLPPYRLAKMYSSHNSHHM*CSPFIL
Trigger: CAAGATAAAAGGTGAACACCACATATGGTGTGAATT...GTGAGAACTGTACATTTTAGCAAGTCTATACGGCGGTAAGGTGGTTTCTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445699.5
3UTR CAA 72 bp CTAAATCATAGAATGCCCATTACTTTGAGAAAATGGTaGAGGAGTACAAATGTCTGCATATGTTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LNHRMPITLRKW*RSTNVCICWPL
Trigger: CAGTGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCTATGATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR TCA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAATTCCACTGGAGTATGTaGATGAGCATGGTGATTGTT +
Preference number: 4 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEFHWSM*MSMVIV
Trigger: AACAATCACCATGCTCATTCACATACTCCAGTGGAA...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR TCA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCATCAACCTGACTATTTaGATCAGATTCTGGCACTAC +
Preference number: 4 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSINLTI*IRFWHY
Trigger: GTAGTGCCAGAATCTGATTCAAATAGTCAGGTTGAT...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR TCA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTGCATATGTTGGCCACTaGAATAATCCAAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLAYVGH*NNPRLT
Trigger: AGTTAGCCTTGGATTATTTCAGTGGCCAACATATGC...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR TCA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCTTCAGAATAACTCTATaGACAAAAGAGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ICTQERQHKYEIYTLKLAFRITL*TKEPRL
Trigger: CAACCTGGGCTCTTTTGTTCATAGAGTTATTCTGAA...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR TCA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCTATTGCTTAAACAACTaGCACAGCTGTTACATACGA +
Preference number: 4 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVYCLNN*HSCYIR
Trigger: TCGTATGTAACAGCTGTGTCAGTTGTTTAAGCAATA...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS-3UTR GCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGACTTGTTGTTGTTTTTaGTCTTTCGACCACTCCGTG +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMTCCCF*SFDHSV
Trigger: CACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGT...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCTTTATTTGTGTCTGCTaGCTCTTCTCTTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVFICVC*LFSSLQ
Trigger: CTGCAATGAAGAGAAGAGGCAGCAGACACAAATAAA...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTGTGGTTGCCTGGAAATaGATTGTTTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RMPITLRKWLRSTNVCICVVAWK*IVSSFS
Trigger: AGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR GCA 90 bp GTTGATGAGGTAGTTCCATGTTTGGCCCCATTATATATGACTCAGATATTAACAAGGAGTACAAATGTCTaGATATGTTGGCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: VDEVVPCLAPLYMTQILTRSTNV*ICWPLK
Trigger: TTTCAGTGGCCAACATATGCAGACATTTGTACTCCT...TGTTAATATCTGAGTCATATATAATGGGGCCAAACATGGAACTACCTCATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR GCA 90 bp ATTCTGGCACTACAGTTGTTTGTTGAGAGATTTCTTGTACAACAGTTGATGATGAGGAGTACAAATGTCTaGATATGTTGGCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: ILALQLFVERFLVQQLMMRSTNV*ICWPLK
Trigger: TTTCAGTGGCCAACATATGCAGACATTTGTACTCCT...CATCATCAACTGTTGTACAAGAAATCTCTCAACAAACAACTGTAGTGCCAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR GCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGTCTATTTGGCTACATTaGCTCCAGTCAAAACACCCA +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLSIWLH*LQSKHP
Trigger: TGGGTGTTTTGACTGGAGGCAATGTAGCCAAATAGA...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CCA 90 bp GCCCAGAGTGATACAAAATTTGAATTAACTGTCATATCAGTAAGTGGTAGAATCGAAGATGATGACTGCTaGCTTGAAGACTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AQSDTKFELTVISVSGRIEDDDC*LEDLLL
Trigger: CAACAACAAGTCTTCAAGCCAGCAGTCATCATCTTC...GATTCTACCACTTACTGATATGACAGTTAATTCAAATTTTGTATCACTCTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGTCTATAGGGCAATCTTaGTTATCACATCCCACCATC +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMSIGQS*LSHPTI
Trigger: GATGGTGGGATGTGATAACCAAGATTGCCCTATAGA...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp TACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAAACTAGACATTTTCCATaGCTCTACATGACACATTTT +
Preference number: 4 (lower is better)
Translates to: YNSHHMWCSPFILCPAHQTRHFP*LYMTHF
Trigger: AAAATGTGTCATGTAGAGCCATGGAAAATGTCTAGT...TTGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR TCA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATCAACCTGACTATTTaGATCAGATTCTGGCACTAC +
Preference number: 4 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEINLTI*IRFWHY
Trigger: GTAGTGCCAGAATCTGATTCAAATAGTCAGGTTGAT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR TCA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCCTTCAGCCTGCTaGATTAGTTTCACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFFPSAC*ISFTKK
Trigger: TTTCTTTGTGAAACTAATTCAGCAGGCTGAAGGAAA...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGTCATGTCTTTTAGACTaGAGGAAAAGCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLSCLLD*RKSQMM
Trigger: CATCATCTGGCTTTTCCTTCAGTCTAAAAGACATGA...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGATAACAGGATGTTCCTaGCTCAGACAAAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLITGCS*LRQRTF
Trigger: GAAAGTTCTTTGTCTGAGTCAGGAACATCCTGTTAT...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR TCA 90 bp ACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCAAAAGTTTCAGAATAACTCTATaGACAAAAGAGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TQERQHKYEIYTLKLAKSFRITL*TKEPRL
Trigger: CAACCTGGGCTCTTTTGTTCATAGAGTTATTCTGAA...ACTTTTGGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR GCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGTTTATTTGTGTCTGCTaGCTCTTCTCTTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMFICVC*LFSSLQ
Trigger: CTGCAATGAAGAGAAGAGGCAGCAGACACAAATAAA...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTGTGGTTGCCTGGAAATaGATTGTTTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLVVAWK*IVSSFS
Trigger: AGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGTGGTTGCCTGGAAATaGATTGTTTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLVVAWK*IVSSFS
Trigger: AGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCAATCCTTTAAGTGGTTaGCTGGAAATGCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVNPLSG*LEMHCF
Trigger: GAAACAATGCATTTCCAGGCAACCACTTAAAGGATT...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR GCA 90 bp GAGCCCAGGTTGTTAGCACCATTAAAATGTGTGTACTACATAAAAACAACTAGATTTTATCTTGTGTCCTaGTCACCAATGACATTTTAC +
Preference number: 4 (lower is better)
Translates to: EPRLLAPLKCVYYIKTTRFYLVS*SPMTFY
Trigger: GTAAAATGTCATTGGTGAGCAGGACACAAGATAAAA...TCTAGTTGTTTTTATGTAGTACACACATTTTAATGGTGCTAACAACCTGGGCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CCA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGTGTAAATCCTTTAAGTaGTTGCCTGGAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMCKSFK*LPGNAL
Trigger: CAATGCATTTCCAGGCAACCACTTAAAGGATTTACA...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp TGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTTGTAAATCCTTTAAGTaGTTGCCTGGAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: CLCKSFKWLPGNALFLLSCKSFK*LPGNAL
Trigger: CAATGCATTTCCAGGCAACCACTTAAAGGATTTACA...AGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CCA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCAATTCACACCATATGTaGTGTTCACCTTTTATCTTG +
Preference number: 4 (lower is better)
Translates to: ICTQERQHKYEIYTLKLANSHHM*CSPFIL
Trigger: CAAGATAAAAGGTGAACACCACATATGGTGTGAATT...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CCA 90 bp GAGCCCAGGTTGTTAGCACCATTAAAATGTGTGTACTACATAAAAACAACTAGAACTAGACATTTTCCATaGCTCTACATGACACATTTT +
Preference number: 4 (lower is better)
Translates to: EPRLLAPLKCVYYIKTTRTRHFP*LYMTHF
Trigger: AAAATGTGTCATGTAGAGCCATGGAAAATGTCTAGT...TCTAGTTGTTTTTATGTAGTACACACATTTTAATGGTGCTAACAACCTGGGCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS GCA 90 bp ATCTCGCGCATTTCCGTGAAGCGGTCCCGCAGATCCATAGGAAGCTaGTCAATCACTGTCAAAGGGAGAGTCCGTCAGAGGGGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: ISRISVKRSRRSIGS*SITVKGRVRQRGGA
Trigger: GGCCCCGCCCCTCTGACGGACTCTCCCTTTGACAGTGATTGAGCAGCTTCCTATGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431467.1
CDS-3UTR CAA 90 bp TGCTCTTTCGACCACTCCGTGAGTCGGCTGCTGATGAACTGGCATTCTGTGTTATGTAGCCTGAACTGCTaGAGCAGCTGCCATGGTAAT +
Preference number: 5 (lower is better)
Translates to: CSFDHSVSRLLMNWHSVLCSLNC*SSCHGN
Trigger: ATTACCATGGCAGCTGCTCAAGCAGTTCAGGCTACA...TAACACAGAATGCCAGTTCATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp CCTTCAGTCCCCCGCCCCCTCCCTCATGAACTGCACTCTATCTGGATGCAGAAAACTGTGAACCCACATTaGGATATTTTGTCCCAACTG +
Preference number: 5 (lower is better)
Translates to: PSVPRPLPHELHSIWMQKTVNPH*DILSQL
Trigger: CAGTTGGGACAAAATATCCAAATGTGGGTTCACAGT...TTTCTGCATCCAGATAGAGTGCAGTTCATGAGGGAGGGGGCGGGGGACTGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp TTCTATAGGGCAATCTTGGTTATCACATCCCACCATCTCACCATAAGATACCTGGCTGTCGCCGGAGTTTaGTCCCCTCCAATATGGCGC +
Preference number: 5 (lower is better)
Translates to: FYRAILVITSHHLTIRYLAVAGV*SPPIWR
Trigger: GCGCCATATTGGAGGGGACAAAACTCCGGCGACAGC...CAGGTATCTTATGGTGAGATGGTGGGATGTGATAACCAAGATTGCCCTATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp ACATCAGAAACCACCTTACCGCCGTATAGACTTGCTAAAATGTACAGTTCTCACGCTGTCGCCGGAGTTTaGTCCCCTCCAATATGGCGC +
Preference number: 5 (lower is better)
Translates to: TSETTLPPYRLAKMYSSHAVAGV*SPPIWR
Trigger: GCGCCATATTGGAGGGGACAAAACTCCGGCGACAGC...GTGAGAACTGTACATTTTAGCAAGTCTATACGGCGGTAAGGTGGTTTCTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS-3UTR CAA 90 bp TGCTCTTTCGACCACTCCGTGAGTCGGCTGCTGATGAACTGGCATTCTGTGTTAGTTCTAGTTGATCCATaGCATTCTGCACCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: CSFDHSVSRLLMNWHSVLVLVDP*HSAPAG
Trigger: ACCTGCAGGTGCAGAATGCAATGGATCAACTAGAAC...TAACACAGAATGCCAGTTCATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp AGCAGTGCACTGTGGACAGTACCATTTGCCTTTTGGTGCCTCTGTCAATCCAACTTTGATGGATGCCATTaGCTCTTCCCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: SSALWTVPFAFWCLCQSNFDGCH*LFPPLR
Trigger: CCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAAA...GTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp CCTTCAGTCCCCCGCCCCCTCCCTCATGAACTGCACTCTATCTGGATGCAGAAACTTGAAGACTTGTTGTaGTTTTTGCTCTTTCGACCA +
Preference number: 5 (lower is better)
Translates to: PSVPRPLPHELHSIWMQKLEDLL*FLLFRP
Trigger: TGGTCGAAAGAGCAAAAACAACAACAAGTCTTCAAG...TTTCTGCATCCAGATAGAGTGCAGTTCATGAGGGAGGGGGCGGGGGACTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AAGACTTGTTGTTGTTTTTGCTCTTTCGACCACTCCGTGAGTCGGCTGCTGATGTGCCTCTTCTCTTCATaGCAGCAGTGCACTGTGGAC +
Preference number: 5 (lower is better)
Translates to: KTCCCFCSFDHSVSRLLMCLFSS*QQCTVD
Trigger: GTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCA...CATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp TCTGCTGCCTCTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCCAGGAATATGATCTGTaGTCGTATGGTGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SAASSLHCSSALWTVPFAQEYDL*SYGEKL
Trigger: CAACTTCTCACCATACGACAACAGATCATATTCCTG...GGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp TCTGCTGCCTCTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCTTCTATAGGGCAATCTaGGTTATCACATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: SAASSLHCSSALWTVPFAFYRAI*VITSHH
Trigger: ATGGTGGGATGTGATAACCAAGATTGCCCTATAGAA...GGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp CTATTCTGCAGTCAGCATCACCCTGGTGTAGTAAGGCCCAGAGTGATACAAAATTGTGGACAGTACCATTaGCCTTTTGGTGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LFCSQHHPGVVRPRVIQNCGQYH*PFGASV
Trigger: GACAGAGGCACCAAAAGGCAAATGGTACTGTCCACA...ATTTTGTATCACTCTGGGCCTTACTACACCAGGGTGATGCTGACTGCAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp GTGAACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTTGTACAACAGCTGTCGCCGGAGTTTaGTCCCCTCCAATATGGCGC +
Preference number: 5 (lower is better)
Translates to: VNPHLDILSQLLHEFCTTAVAGV*SPPIWR
Trigger: GCGCCATATTGGAGGGGACAAAACTCCGGCGACAGC...TGTTGTACAAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AAGACTTGTTGTTGTTTTTGCTCTTTCGACCACTCCGTGAGTCGGCTGCTGATGATAGGATCCCAGAGGTaGGGAGGAATTCACATTGTA +
Preference number: 5 (lower is better)
Translates to: KTCCCFCSFDHSVSRLLMIGSQR*GGIHIV
Trigger: TACAATGTGAATTCCTCCCAACCTCTGGGATCCTAT...CATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp TCTGCTGCCTCTTCTCTTCATTGCAGCAGTGCACTGTGGACAGTACCATTTGCCAGAATGCCCATTACTTaGAGAAAATGGTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: SAASSLHCSSALWTVPFARMPIT*RKWLRS
Trigger: ACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT...GGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp ACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCAAAAGTGCTGTCGCCGGAGTTTaGTCCCCTCCAATATGGCGC +
Preference number: 5 (lower is better)
Translates to: TQERQHKYEIYTLKLAKSAVAGV*SPPIWR
Trigger: GCGCCATATTGGAGGGGACAAAACTCCGGCGACAGC...ACTTTTGGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp TGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTGGTCCAGGGGTTTATTaGTGTCACTCGCTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: CLCKSFKWLPGNALFLLSGPGVY*CHSLSP
Trigger: CGGCGACAGCGAGTGACACAAATAAACCCCTGGACC...AGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CAA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCTGTGGACAGTACCATTaGCCTTTTGGTGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: ATIYIQCYITALEYSTCSCGQYH*PFGASV
Trigger: GACAGAGGCACCAAAAGGCAAATGGTACTGTCCACA...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS TCA 90 bp CCAGCATTATCAGCTTCCAGCTCCATTTTAAACTTAGCCAGTTCCTaGTCCAGCTTTCTCAAGTGTCGATCTACCAAGTCATATATCTGG +
Preference number: 5 (lower is better)
Translates to: PALSASSSILNLASS*SSFLKCRSTKSYIW
Trigger: CCAGATATATGACTTGGTAGATCGACACTTGAGAAAGCTGGATCAGGAACTGGCTAAGTTTAAAATGGAGCTGGAAGCTGATAATGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000431467.1
CDS-3UTR CAA 90 bp TTACAATTCACACCATATGTGGTGTTCACCTTTTATCTTGTGTCCTGCTCACCAGTTCTAGTTGATCCATaGCATTCTGCACCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LQFTPYVVFTFYLVSCSPVLVDP*HSAPAG
Trigger: ACCTGCAGGTGCAGAATGCAATGGATCAACTAGAAC...TGGTGAGCAGGACACAAGATAAAAGGTGAACACCACATATGGTGTGAATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp TTACCTACAGGAGTTTCTGTTTATGTACCCAGGTACTCTAGAGGATACCAGCCCATGATGACTGCTGGCTaGAAGACTTGTTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LPTGVSVYVPRYSRGYQPMMTAG*KTCCCF
Trigger: AAAACAACAACAAGTCTTCAAGCCAGCAGTCATCAT...GGGCTGGTATCCTCTAGAGTACCTGGGTACATAAACAGAAACTCCTGTAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp TTCTATAGGGCAATCTTGGTTATCACATCCCACCATCTCACCATAAGATACCTGAGTACCATTTGCCTTTaGGTGCCTCTGTCAATCCAA +
Preference number: 5 (lower is better)
Translates to: FYRAILVITSHHLTIRYLSTICL*VPLSIQ
Trigger: TTGGATTGACAGAGGCACCAAAAGGCAAATGGTACT...CAGGTATCTTATGGTGAGATGGTGGGATGTGATAACCAAGATTGCCCTATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427726.5
CDS-3UTR CAA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCAGGGAGCTGGTAGAGTaGTATAATCAGACTGTGGCA +
Preference number: 5 (lower is better)
Translates to: ATIYIQCYITALEYSTCSRELVE*YNQTVA
Trigger: TGCCACAGTCTGATTATACAACTCTACCAGCTCCCT...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCGTTCTAGTTGATCCATaGCATTCTGCACCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVVLVDP*HSAPAG
Trigger: ACCTGCAGGTGCAGAATGCAATGGATCAACTAGAAC...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCTTTGATGGATGCCATTaGCTCTTCCCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVFDGCH*LFPPLR
Trigger: CCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAAA...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GAGCCCAGGTTGTTAGCACCATTAAAATGTGTGTACTACATAAAAACAACTAGATTTGATGGATGCCATTaGCTCTTCCCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: EPRLLAPLKCVYYIKTTRFDGCH*LFPPLR
Trigger: CCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAAA...TCTAGTTGTTTTTATGTAGTACACACATTTTAATGGTGCTAACAACCTGGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCTTTGATGGATGCCATTaGCTCTTCCCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: ICTQERQHKYEIYTLKLAFDGCH*LFPPLR
Trigger: CCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAAA...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp GGGGGTCTCTTTACTCTATTTGGCTACATTGCCTCCAGTCAAAACACCCATAACATTCTGGCACTACAGTaGTTTGTTGAGAGATTTCTT +
Preference number: 5 (lower is better)
Translates to: GGLFTLFGYIASSQNTHNILALQ*FVERFL
Trigger: AAGAAATCTCTCAACAAACAACTGTAGTGCCAGAAT...GTTATGGGTGTTTTGACTGGAGGCAATGTAGCCAAATAGAGTAAAGAGACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAATGCCTCTTCTCTTCATaGCAGCAGTGCACTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLECLFSS*QQCTVD
Trigger: GTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCA...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTTGCCTCTTCTCTTCATaGCAGCAGTGCACTGTGGAC +
Preference number: 5 (lower is better)
Translates to: CLCKSFKWLPGNALFLLSCLFSS*QQCTVD
Trigger: GTCCACAGTGCACTGCTGCAATGAAGAGAAGAGGCA...AGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GGGGGTCTCTTTACTCTATTTGGCTACATTGCCTCCAGTCAAAACACCCATAACTGTTTTCTAAGTGATTaGGTAAGGAGTGGAATTCAC +
Preference number: 5 (lower is better)
Translates to: GGLFTLFGYIASSQNTHNCFLSD*VRSGIH
Trigger: GTGAATTCCACTCCTTACCAAATCACTTAGAAAACA...GTTATGGGTGTTTTGACTGGAGGCAATGTAGCCAAATAGAGTAAAGAGACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp GTTGATGAGGTAGTTCCATGTTTGGCCCCATTATATATGACTCAGATATTAACAGTTCTAGTTGATCCATaGCATTCTGCACCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: VDEVVPCLAPLYMTQILTVLVDP*HSAPAG
Trigger: ACCTGCAGGTGCAGAATGCAATGGATCAACTAGAAC...TGTTAATATCTGAGTCATATATAATGGGGCCAAACATGGAACTACCTCATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTTTGATGGATGCCATTaGCTCTTCCCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: RSYRIVYVNPLSGCLEMHFDGCH*LFPPLR
Trigger: CCTGAGTGGAGGGAAGAGCAAATGGCATCCATCAAA...ATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGCCAGGAATATGATCTGTaGTCGTATGGTGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ATIYIQCYITALEYSTCSQEYDL*SYGEKL
Trigger: CAACTTCTCACCATACGACAACAGATCATATTCCTG...GCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CAA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTGTAGCCTGAACTGCTaGAGCAGCTGCCATGGTAAT +
Preference number: 5 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLCSLNC*SSCHGN
Trigger: ATTACCATGGCAGCTGCTCAAGCAGTTCAGGCTACA...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTTGTAGCCTGAACTGCTaGAGCAGCTGCCATGGTAAT +
Preference number: 5 (lower is better)
Translates to: CLCKSFKWLPGNALFLLSCSLNC*SSCHGN
Trigger: ATTACCATGGCAGCTGCTCAAGCAGTTCAGGCTACA...AGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGGACTTGTTGTTGTTTTaGCTCTTTCGACCACTCCGT +
Preference number: 5 (lower is better)
Translates to: CNHLYTVLHNSSGVQYMQDLLLF*LFRPLR
Trigger: ACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTC...CTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAATGTGGACAGTACCATTaGCCTTTTGGTGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLECGQYH*PFGASV
Trigger: GACAGAGGCACCAAAAGGCAAATGGTACTGTCCACA...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp ATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGGTAGCACTGCATAGATTTAGAATGCCCATTACTTaGAGAAAATGGTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: IFEIPYLPHTLWVALHRFRMPIT*RKWLRS
Trigger: ACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT...AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp CACCATGAACATTTTGATATACACTCCATAGCAGTAAGGCCTCAATTTTCACCAGTCTCTTTACTCTATTaGGCTACATTGCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: HHEHFDIHSIAVRPQFSPVSLLY*ATLPPV
Trigger: GACTGGAGGCAATGTAGCCAAATAGAGTAAAGAGAC...TGGTGAAAATTGAGGCCTTACTGCTATGGAGTGTATATCAAAATGTTCATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATGTTCTAGTTGATCCATaGCATTCTGCACCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RSYRIVYVNPLSGCLEMHVLVDP*HSAPAG
Trigger: ACCTGCAGGTGCAGAATGCAATGGATCAACTAGAAC...ATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCATAGGATCCCAGAGGTaGGGAGGAATTCACATTGTA +
Preference number: 5 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSIGSQR*GGIHIV
Trigger: TACAATGTGAATTCCTCCCAACCTCTGGGATCCTAT...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCATGGCACTACAGTTGTTaGTTGAGAGATTTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: PITLRKWLRSTNVCICWPWHYSC*LRDFLY
Trigger: GTACAAGAAATCTCTCAACAAACAACTGTAGTGCCA...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CAA 90 bp ATCTTTGAAATCCCCTATCTACCTCACACCCTTTGGGTAGCACTGCATAGATTTAAATCCTTTAAGTGGTaGCCTGGAAATGCATTGTTT +
Preference number: 5 (lower is better)
Translates to: IFEIPYLPHTLWVALHRFKSFKW*PGNALF
Trigger: AAACAATGCATTTCCAGGCAACCACTTAAAGGATTT...AAATCTATGCAGTGCTACCCAAAGGGTGTGAGGTAGATAGGGGATTTCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AGAATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTAGGTGGAAGAGATCTTaGAAATCCCCTATCTACCTC +
Preference number: 5 (lower is better)
Translates to: RMPITLRKWLRSTNVCICRWKRS*KSPIYL
Trigger: GAGGTAGATAGGGGATTTCAAAGATCTCTTCCACCT...ACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCACCACATTTGGATATTTaGTCCCAACTGTTACATGAG +
Preference number: 5 (lower is better)
Translates to: PITLRKWLRSTNVCICWPPHLDI*SQLLHE
Trigger: CTCATGTAACAGTTGGGACAAAATATCCAAATGTGG...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp TTATTCCACAGTAAATCAAGCTACAGCCTATTCTACCTATCTTTAGGCAGTGTCAGTCATATATCTGGTTaGCCAACTGAACCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LFHSKSSYSLFYLSLGSVSHISG*PTEPSH
Trigger: ATGAGAAGGTTCAGTTGGCAAACCAGATATATGACT...GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp TCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGATAGGATCCCAGAGGTaGGGAGGAATTCACATTGTA +
Preference number: 5 (lower is better)
Translates to: SRSYRIVYVNPLSGCLEMIGSQR*GGIHIV
Trigger: TACAATGTGAATTCCTCCCAACCTCTGGGATCCTAT...CATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCAACTGGCTTTTAAACTaGATGTTCTTCGTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSNWLLN*MFFVPP
Trigger: AGGAGGGACGAAGAACATCAAGTTTAAAAGCCAGTT...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGACTTGTTGTTGTTTTaGCTCTTTCGACCACTCCGT +
Preference number: 5 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLDLLLF*LFRPLR
Trigger: ACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTC...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp ATGCCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGATGATGACTGCTGGCTaGAAGACTTGTTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: MPITLRKWLRSTNVCICWMMTAG*KTCCCF
Trigger: AAAACAACAACAAGTCTTCAAGCCAGCAGTCATCAT...CCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CAA 90 bp CCCATTACTTTGAGAAAATGGTTGAGGAGTACAAATGTCTGCATATGTTGGCCACACTACAGTTGTTTGTaGAGAGATTTCTTGTACAAC +
Preference number: 5 (lower is better)
Translates to: PITLRKWLRSTNVCICWPHYSCL*RDFLYN
Trigger: GTTGTACAAGAAATCTCTCAACAAACAACTGTAGTG...TGGCCAACATATGCAGACATTTGTACTCCTCAACCATTTTCTCAAAGTAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS-3UTR CAA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCAGTATCGAGGTTCATTaGGGTCGTAAGTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSSIEVH*GRKSNQ
Trigger: TTGATTGGACTTACGACCCAAATGAACCTCGATACT...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GTGAACCCACATTTGGATATTTTGTCCCAACTGTTACATGAGTTTTGTACAACATTCTATAGGGCAATCTaGGTTATCACATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: VNPHLDILSQLLHEFCTTFYRAI*VITSHH
Trigger: ATGGTGGGATGTGATAACCAAGATTGCCCTATAGAA...TGTTGTACAAAACTCATGTAACAGTTGGGACAAAATATCCAAATGTGGGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTCTATAGGGCAATCTaGGTTATCACATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFFYRAI*VITSHH
Trigger: ATGGTGGGATGTGATAACCAAGATTGCCCTATAGAA...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAAGTACCATTTGCCTTTaGGTGCCTCTGTCAATCCAA +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLESTICL*VPLSIQ
Trigger: TTGGATTGACAGAGGCACCAAAAGGCAAATGGTACT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTAGTACCATTTGCCTTTaGGTGCCTCTGTCAATCCAA +
Preference number: 5 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLSTICL*VPLSIQ
Trigger: TTGGATTGACAGAGGCACCAAAAGGCAAATGGTACT...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GTTGATGAGGTAGTTCCATGTTTGGCCCCATTATATATGACTCAGATATTAACAGAGGTAGTTCCATGTTaGGCCCCATTATATATGACT +
Preference number: 5 (lower is better)
Translates to: VDEVVPCLAPLYMTQILTEVVPC*APLYMT
Trigger: AGTCATATATAATGGGGCCAAACATGGAACTACCTC...TGTTAATATCTGAGTCATATATAATGGGGCCAAACATGGAACTACCTCATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp ATCTGTACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCTACCGCCGTATAGACTaGCTAAAATGTACAGTTCTC +
Preference number: 5 (lower is better)
Translates to: ICTQERQHKYEIYTLKLAYRRID*LKCTVL
Trigger: GAGAACTGTACATTTTAGCAAGTCTATACGGCGGTA...GGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGTACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS-3UTR CAA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTCAGGAATATGATCTGTaGTCGTATGGTGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLQEYDL*SYGEKL
Trigger: CAACTTCTCACCATACGACAACAGATCATATTCCTG...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAAACTGGCTTTTAAACTaGATGTTCTTCGTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLENWLLN*MFFVPP
Trigger: AGGAGGGACGAAGAACATCAAGTTTAAAAGCCAGTT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCCTTGAAGACTTGTTGTaGTTTTTGCTCTTTCGACCA +
Preference number: 5 (lower is better)
Translates to: RIVYVNPLSGCLEMHCFFLEDLL*FLLFRP
Trigger: TGGTCGAAAGAGCAAAAACAACAACAAGTCTTCAAG...GAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCCCTTGAAGACTTGTTGTaGTTTTTGCTCTTTCGACCA +
Preference number: 5 (lower is better)
Translates to: WLPGNALFLLSLLFFLKSLEDLL*FLLFRP
Trigger: TGGTCGAAAGAGCAAAAACAACAACAAGTCTTCAAG...GGACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCTTCTCTTCTTTTTAAAGTCTGGCTTGAAGACTTGTaGTTGTTTTTGCTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: VVAWKCIVSSFSSLLFKVWLEDL*LFLLFR
Trigger: TCGAAAGAGCAAAAACAACAACAAGTCTTCAAGCCA...GACTTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp CACCATGAACATTTTGATATACACTCCATAGCAGTAAGGCCTCAATTTTCACCACACTACAGTTGTTTGTaGAGAGATTTCTTGTACAAC +
Preference number: 5 (lower is better)
Translates to: HHEHFDIHSIAVRPQFSPHYSCL*RDFLYN
Trigger: GTTGTACAAGAAATCTCTCAACAAACAACTGTAGTG...TGGTGAAAATTGAGGCCTTACTGCTATGGAGTGTATATCAAAATGTTCATGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAAGTATCGAGGTTCATTaGGGTCGTAAGTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLESIEVH*GRKSNQ
Trigger: TTGATTGGACTTACGACCCAAATGAACCTCGATACT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TCAAGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGAGTATCGAGGTTCATTaGGGTCGTAAGTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: SSSRSYRIVYVNPLSGCLSIEVH*GRKSNQ
Trigger: TTGATTGGACTTACGACCCAAATGAACCTCGATACT...CAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp TGCAACCATTTATATACAGTGTTACATAACAGCTCTGGAGTACAGTACATGCAGAAATCCTTTAAGTGGTaGCCTGGAAATGCATTGTTT +
Preference number: 5 (lower is better)
Translates to: CNHLYTVLHNSSGVQYMQKSFKW*PGNALF
Trigger: AAACAATGCATTTCCAGGCAACCACTTAAAGGATTT...CTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATGGTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000427726.5
CDS GCA 90 bp CACAGTATGCACATTACTTTTACTTACCAAGTCATATATCTGGTTTaGCAACTGAACCTTCTCATCTGCATCTTCCAAAGCTTTATAGTA +
Preference number: 5 (lower is better)
Translates to: HSMHITFTYQVIYLV*QLNLLICIFQSFIV
Trigger: TACTATAAAGCTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATATATGACTTGGTAAGTAAAAGTAATGTGCATACTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS-3UTR CAA 90 bp GCCCAGAGTGATACAAAATTTGAATTAACTGTCATATCAGTAAGTGGTAGAATCAGTCATATATCTGGTTaGCCAACTGAACCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: AQSDTKFELTVISVSGRISHISG*PTEPSH
Trigger: ATGAGAAGGTTCAGTTGGCAAACCAGATATATGACT...GATTCTACCACTTACTGATATGACAGTTAATTCAAATTTTGTATCACTCTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315870.10
CDS-3UTR CAA 90 bp TGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTAGTCATATATCTGGTTaGCCAACTGAACCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: CLCKSFKWLPGNALFLLSSHISG*PTEPSH
Trigger: ATGAGAAGGTTCAGTTGGCAAACCAGATATATGACT...AGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp ACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCAAAAGTAGTCATATATCTGGTTaGCCAACTGAACCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: TQERQHKYEIYTLKLAKSSHISG*PTEPSH
Trigger: ATGAGAAGGTTCAGTTGGCAAACCAGATATATGACT...ACTTTTGGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAATGGCTTGAAGACTTGTaGTTGTTTTTGCTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEWLEDL*LFLLFR
Trigger: TCGAAAGAGCAAAAACAACAACAAGTCTTCAAGCCA...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGATGACTGCTGGCTaGAAGACTTGTTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEMMTAG*KTCCCF
Trigger: AAAACAACAACAAGTCTTCAAGCCAGCAGTCATCAT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGGCACTACAGTTGTTaGTTGAGAGATTTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RSYRIVYVNPLSGCLEMHWHYSC*LRDFLY
Trigger: GTACAAGAAATCTCTCAACAAACAACTGTAGTGCCA...ATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp GATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTGGCACTACAGTTGTTaGTTGAGAGATTTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: DCLCKSFKWLPGNALFLLWHYSC*LRDFLY
Trigger: GTACAAGAAATCTCTCAACAAACAACTGTAGTGCCA...AAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp ACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCAAAAGTACAAAAGAGCCCAGGTaGTTAGCACCATTAAAATGT +
Preference number: 5 (lower is better)
Translates to: TQERQHKYEIYTLKLAKSTKEPR*LAPLKC
Trigger: ACATTTTAATGGTGCTAACAACCTGGGCTCTTTTGT...ACTTTTGGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp AGACATTTTCCATGGCTCTACATGACACATTTTCAAGTTTGTGGTATAAGCATTACAAAAGAGCCCAGGTaGTTAGCACCATTAAAATGT +
Preference number: 5 (lower is better)
Translates to: RHFPWLYMTHFQVCGISITKEPR*LAPLKC
Trigger: ACATTTTAATGGTGCTAACAACCTGGGCTCTTTTGT...AATGCTTATACCACAAACTTGAAAATGTGTCATGTAGAGCCATGGAAAATGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339121.9
ENST00000445699.5
CDS-3UTR CAA 90 bp TGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATGCATTGTTTCTTCTTTCTCACTACAGTTGTTTGTaGAGAGATTTCTTGTACAAC +
Preference number: 5 (lower is better)
Translates to: CLCKSFKWLPGNALFLLSHYSCL*RDFLYN
Trigger: GTTGTACAAGAAATCTCTCAACAAACAACTGTAGTG...AGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAATTCTGGCACTACAGTaGTTTGTTGAGAGATTTCTT +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEILALQ*FVERFL
Trigger: AAGAAATCTCTCAACAAACAACTGTAGTGCCAGAAT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp AGTTCAAGATCTTATAGGATTGTCTATGTAAATCCTTTAAGTGGTTGCCTGGAAAAATCCTTTAAGTGGTaGCCTGGAAATGCATTGTTT +
Preference number: 5 (lower is better)
Translates to: SSRSYRIVYVNPLSGCLEKSFKW*PGNALF
Trigger: AAACAATGCATTTCCAGGCAACCACTTAAAGGATTT...TTCCAGGCAACCACTTAAAGGATTTACATAGACAATCCTATAAGATCTTGAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315870.10
ENST00000427726.5
ENST00000431467.1
CDS-3UTR CAA 90 bp ACCCAGGAAAGACAACATAAGTATGAAATCTATACACTGAAGTTAGCCAAAAGTGTTTGTCATCTTGTATaGCTTAAACAACTGACACAG +
Preference number: 5 (lower is better)
Translates to: TQERQHKYEIYTLKLAKSVCHLV*LKQLTQ
Trigger: CTGTGTCAGTTGTTTAAGCAATACAAGATGACAAAC...ACTTTTGGCTAACTTCAGTGTATAGATTTCATACTTATGTTGTCTTTCCTGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS GCA 72 bp ATTTCCGTGAAGCGGTCCCGCAGATCCATAGGAAGCTaGTCAATCACTGTCAAAGGGAGAGTCCGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: ISVKRSRRSIGS*SITVKGRVRQR
Trigger: CCTCTGACGGACTCTCCCTTTGACAGTGATTGAGCAGCTTCCTATGGATCTGCGGGACCGCTTCACGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431467.1
CDS TCA 72 bp TCAGCTTCCAGCTCCATTTTAAACTTAGCCAGTTCCTaGTCCAGCTTTCTCAAGTGTCGATCTACCAAGTCA +
Preference number: 6 (lower is better)
Translates to: SASSSILNLASS*SSFLKCRSTKS
Trigger: TGACTTGGTAGATCGACACTTGAGAAAGCTGGATCAGGAACTGGCTAAGTTTAAAATGGAGCTGGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000431467.1
CDS CAA 72 bp TTCTCAAGTGTCGATCTACCAAGTCATATATCTGGTTaGCCAACTGAACCTTCTCATCTGCATCTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: FSSVDLPSHISG*PTEPSHLHLPK
Trigger: CTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATATATGACTTGGTAGATCGACACTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315870.10
ENST00000431467.1
CDS CAA 72 bp CAATCTTTTAGAAGTGCTGCAAGTCATATATCTGGTTaGCCAACTGAACCTTCTCATCTGCATCTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: QSFRSAASHISG*PTEPSHLHLPK
Trigger: CTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATATATGACTTGCAGCACTTCTAAAAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339121.9
CDS GCA 72 bp CACATTACTTTTACTTACCAAGTCATATATCTGGTTTaGCAACTGAACCTTCTCATCTGCATCTTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: HITFTYQVIYLV*QLNLLICIFQS
Trigger: GCTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATATATGACTTGGTAAGTAAAAGTAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS CAA 72 bp GCACATTACTTTTACTTACCAAGTCATATATCTGGTTaGCCAACTGAACCTTCTCATCTGCATCTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: AHYFYLPSHISG*PTEPSHLHLPK
Trigger: CTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATATATGACTTGGTAAGTAAAAGTAATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445699.5
CDS CAA 90 bp GCACAGTATGCACATTACTTTTACTTACCAAGTCATATATCTGGTTaGCCAACTGAACCTTCTCATCTGCATCTTCCAAAGCTTTATAGT +
Preference number: 6 (lower is better)
Translates to: AQYAHYFYLPSHISG*PTEPSHLHLPKLYS
Trigger: ACTATAAAGCTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATATATGACTTGGTAAGTAAAAGTAATGTGCATACTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445699.5