RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INCENP (Homo sapiens)

Ensembl gene IDs: ENSG00000149503

Ensembl transcript IDs: ENST00000278849.4, ENST00000394818.8, ENST00000528037.1, ENST00000528375.1, ENST00000531099.1, ENST00000533896.5

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCAGGTaGTGGAACAGTACCTTCGTCCTGCAGGCCACTGGTGGCCCAAGA +
Preference number: 1 (lower is better)
Translates to: RGWGPAPGDPEAHRR*WNSTFVLQATGGPR
Trigger: TCTTGGGCCACCAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CCA 90 bp GGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTaGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCC +
Preference number: 1 (lower is better)
Translates to: GTPQVMEQYLRPAGH*WPKTHSYRAGTEAP
Trigger: GGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR GCA 90 bp ACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTaGAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTG +
Preference number: 1 (lower is better)
Translates to: TDVFLKGYPGSGTTH*SSISEGGGLHLVIL
Trigger: CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CCA 90 bp CCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATaGCATGCCAAGAAGGAGGGCAACAGACCAAGACAGAGACCGACA +
Preference number: 1 (lower is better)
Translates to: PAQRTFIYTWPSPPQ*HAKKEGNRPRQRPT
Trigger: TGTCGGTCTCTGTCTTGGTCTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CCA 90 bp CACCTGCAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTaGCCAAGCCCTCCACAATGGCATGCCAAGAAGGAGGGCAACAGA +
Preference number: 1 (lower is better)
Translates to: HLQQKHPAQRTFIYT*PSPPQWHAKKEGNR
Trigger: TCTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR GCA 90 bp ACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATGGCATaGCAAGAAGGAGGGCAACAGACCAAGACAGAGACCGACAGACAG +
Preference number: 1 (lower is better)
Translates to: TEDVYIHLAKPSTMA*QEGGQQTKTETDRQ
Trigger: CTGTCTGTCGGTCTCTGTCTTGGTCTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR GCA 90 bp GATACCCCTTTTCTACTCAGACCTCATGCTTCACCAGCACATAGATaGTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGG +
Preference number: 1 (lower is better)
Translates to: DTPFLLRPHASPAHR*SQVHLHLSSTGGAW
Trigger: CCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAAAGGGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR GCA 90 bp GGACCACAGCCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTaGCTGGTTTTGCTGGGGAAATATCTCGCTGCTTGCAAGCACTGG +
Preference number: 1 (lower is better)
Translates to: GPQPAFIGSKHLISS*LVLLGKYLAACKHW
Trigger: CCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGGCTGTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR TCA 90 bp CAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCCTACAGGGCTGGGACTaGGGCGCCCAGTCTTCATGG +
Preference number: 2 (lower is better)
Translates to: QQHLRGWGPAPGDPEAHRLQGWD*GAQSSW
Trigger: CCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAG...GCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGCGTCCTGCAGGCCACTaGTGGCCCAAGACACACAGC +
Preference number: 2 (lower is better)
Translates to: TTHCSSISEGGGLHLVILRPAGH*WPKTHS
Trigger: GCTGTGTGTCTTGGGCCACCAGTGGCCTGCAGGACG...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR GCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGCCCTCCACAATGGCATaGCAAGAAGGAGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: TTHCSSISEGGGLHLVILPSTMA*QEGGQQ
Trigger: CTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGG...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGCGTCCTGCAGGCCACTaGTGGCCCAAGACACACAGC +
Preference number: 2 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGRPAGH*WPKTHS
Trigger: GCTGTGTGTCTTGGGCCACCAGTGGCCTGCAGGACG...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR GCA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGACAGGAGGCGAGGCTaGCAAGAAGGCCGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: YRAGTEAPSLHGINSRLEDRRRG*QEGRRP
Trigger: TGGCCTGCGGCCTTCTTGGCAGCCTCGCCTCCTGTC...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR GCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCGACAGGAGGCGAGGCTaGCAAGAAGGCCGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFDRRRG*QEGRRP
Trigger: TGGCCTGCGGCCTTCTTGGCAGCCTCGCCTCCTGTC...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR GCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGACAGTACCTTCGTCCTaGAGGCCACTGGTGGCCCAA +
Preference number: 2 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGETVPSS*RPLVAQ
Trigger: TTGGGCCACCAGTGGCCTGCAGGACGAAGGTACTGT...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCCAGCATCTCCGAGGGTaGGGGCCTGCACCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFQHLRG*GPAPGD
Trigger: ATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTG...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR CCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCCCTGAGCAGCACGGGTaGAGCCTGGGGAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFPEQHG*SLGNGE
Trigger: CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGG...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR TCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGAGGCACACCGCAGGTaGTGGAACAGTACCTTCGTC +
Preference number: 2 (lower is better)
Translates to: SSRVIQAVEPLTAAASPREAHRR*WNSTFV
Trigger: GACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTC...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATACAGGCCATGTGGGGCTaGGCCCATTTCTTCCCCACC +
Preference number: 2 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIQAMWG*AHFFPT
Trigger: GGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTG...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACACGTTTATATACACCTaGCCAAGCCCTCCACAATGG +
Preference number: 2 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHTFIYT*PSPPQW
Trigger: CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGT...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp TGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCTACTCAAGCACGGGTGGAGCCTaGGGAATGGAGAGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: CLQALVPRWSQGIPLFYSSTGGA*GMERVG
Trigger: CCCTACCCTCTCCATTCCCCAGGCTCCACCCGTGCT...TGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR TCA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAGAGGCACACCGCAGGTaGTGGAACAGTACCTTCGTC +
Preference number: 2 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGEAHRR*WNSTFV
Trigger: GACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTC...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR CCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGACGTTTATATACACCTaGCCAAGCCCTCCACAATGG +
Preference number: 2 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGETFIYT*PSPPQW
Trigger: CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGT...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR TCA 90 bp GCAGGACCACAGCCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGAAGTCCATTTGCACCTaGGCAGCACGGGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: AGPQPAFIGSKHLISSCLKSICT*AARVEP
Trigger: AGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTT...CAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGGCTGTGGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR CCA 90 bp CCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGGGGTTATCCAGGCAGTaGAACCACTCACTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: PRSRATGDNNGNGHFHCLGLSRQ*NHSLQQ
Trigger: CTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCC...CAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR TCA 90 bp CCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGCATCGTGACAGTAACTaGCGTGTTCCTCAAGGGTTA +
Preference number: 2 (lower is better)
Translates to: PRSRATGDNNGNGHFHCLHRDSN*RVPQGL
Trigger: TAACCCTTGAGGAACACGTCAGTTACTGTCACGATG...CAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR GCA 90 bp AAAGTTCAAATAGTAAACATATTCAGCTTTGCATGGAGGGGCCTCTGCTGCACATTACAGAGCACTGTCTaGAGGCCATGTGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KVQIVNIFSFAWRGLCCTLQSTV*RPCGAG
Trigger: CCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAA...TGTGCAGCAGAGGCCCCTCCATGCAAAGCTGAATATGTTTACTATTTGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR CAA 90 bp CCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGGTTTaGCTGGGGAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: PAFIGSKHLISSCLV*LGKYLAACKHWSQG
Trigger: ACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR CAA 90 bp GGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTaGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAAATG +
Preference number: 2 (lower is better)
Translates to: GLGLRRPVFMVSTAG*KEYTLLIYLPNAKM
Trigger: CATTTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR-3UTR GCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAATTACAGAGCACTGTCTaGAGGCCATGTGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: HGINSRLEGIYFINLPPKLQSTV*RPCGAG
Trigger: CCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAA...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CAA 90 bp AGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTaGTGTTTCGATAAAACTTTAAAGAACCGACTGTGGCTGGATTTG +
Preference number: 2 (lower is better)
Translates to: SRATGDNNGNGHFHC*CFDKTLKNRLWLDL
Trigger: CAAATCCAGCCACAGTCGGTTCTTTAAAGTTTTATCGAAACACAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR GCA 90 bp AAAGTTCAAATAGTAAACATATTCAGCTTTGCATGGAGGGGCCTCTGCTGCACACATTTAATTAGCAGCTaGCTGGTTTTGCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: KVQIVNIFSFAWRGLCCTHLISS*LVLLGK
Trigger: TTTCCCCAGCAAAACCAGGCAGCTGCTAATTAAATG...TGTGCAGCAGAGGCCCCTCCATGCAAAGCTGAATATGTTTACTATTTGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR-3UTR GCA 90 bp AAAGTTCAAATAGTAAACATATTCAGCTTTGCATGGAGGGGCCTCTGCTGCACAACAGTAGCAGATATATaGATTCAGAAGGCAGCAGTA +
Preference number: 2 (lower is better)
Translates to: KVQIVNIFSFAWRGLCCTTVADI*IQKAAV
Trigger: TACTGCTGCCTTCTGAATGCATATATCTGCTACTGT...TGTGCAGCAGAGGCCCCTCCATGCAAAGCTGAATATGTTTACTATTTGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR CCA 72 bp CAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTaGGGGCCTGCACCTGGTGATCCTGAGGCACACCGC +
Preference number: 3 (lower is better)
Translates to: QWNHSLQQHLRG*GPAPGDPEAHR
Trigger: GCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR TCA 72 bp GGGCCTGCACCTGGTGATCCTGAGGCACACCGCAGGTaGTGGAACAGTACCTTCGTCCTGCAGGCCACTGGT +
Preference number: 3 (lower is better)
Translates to: GPAPGDPEAHRR*WNSTFVLQATG
Trigger: ACCAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGATCACCAGGTGCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR GCA 72 bp TTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTaGAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTG +
Preference number: 3 (lower is better)
Translates to: FLKGYPGSGTTH*SSISEGGGLHL
Trigger: CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR TCA 72 bp CTGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTaGGGCGCCCAGTCTTCATGGTATCAACAGCAGGCT +
Preference number: 3 (lower is better)
Translates to: LVAQDTQLQGWD*GAQSSWYQQQA
Trigger: AGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CCA 72 bp CAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTaGTGGCCCAAGACACACAGCTACAGGGCTGGGACT +
Preference number: 3 (lower is better)
Translates to: QVMEQYLRPAGH*WPKTHSYRAGT
Trigger: AGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR TCA 72 bp AGGAAGGAGCTCCACCTGCCCCATCGTGACAGTAACTaGCGTGTTCCTCAAGGGTTATCCAGGCAGTGGAAC +
Preference number: 3 (lower is better)
Translates to: RKELHLPHRDSN*RVPQGLSRQWN
Trigger: GTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCAGGTGGAGCTCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR TCA 72 bp GTGGCAGGGCCGTGTCAAGACCCAGGTCTTTCCCAATaGACAAACTCCCCTTTACAAACAGGGAGCACCCCA +
Preference number: 3 (lower is better)
Translates to: VAGPCQDPGLSQ*TNSPLQTGSTP
Trigger: TGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGACACGGCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR GCA 72 bp GTTTATATACACCTGGCCAAGCCCTCCACAATGGCATaGCAAGAAGGAGGGCAACAGACCAAGACAGAGACC +
Preference number: 3 (lower is better)
Translates to: VYIHLAKPSTMA*QEGGQQTKTET
Trigger: GGTCTCTGTCTTGGTCTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGGCTTGGCCAGGTGTATATAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CCA 72 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTaGCCAAGCCCTCCACAATGGCATGCCAAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: QKHPAQRTFIYT*PSPPQWHAKKE
Trigger: CTCCTTCTTGGCATGCCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CCA 72 bp GAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTaGTCTCAAGGGATACCCCTTTTCTACTCAGACCTC +
Preference number: 3 (lower is better)
Translates to: EISRCLQALVPR*SQGIPLFYSDL
Trigger: GAGGTCTGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR GCA 72 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATaGTCTCAAGTCCATTTGCACCTGAGCAGCACGGGT +
Preference number: 3 (lower is better)
Translates to: FLLRPHASPAHR*SQVHLHLSSTG
Trigger: ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR GCA 72 bp CCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTaGCTGGTTTTGCTGGGGAAATATCTCGCTGCTTGC +
Preference number: 3 (lower is better)
Translates to: PAFIGSKHLISS*LVLLGKYLAAC
Trigger: GCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGCCTGGAGCCGCTCCTaGTCCCGCCGACGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPAWSRS*SRRRSC
Trigger: GCAGGAGCGTCGGCGGGAGCAGGAGCGGCTCCAGGC...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCGCCTTCTCCCGCTCCTaGAGCTCCCTCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QQHLRGWGPAPGDPEAHRAFSRS*SSLSAW
Trigger: CCAGGCCGAGAGGGAGCTGCAGGAGCGGGAGAAGGC...GCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACGGCTGTAGGCCAGGCTaGTGGGGACCCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHGCRPG*WGPWRP
Trigger: AGGGCGCCAGGGTCCCCAGCAGCCTGGCCTACAGCC...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGCTGCTCCCGCTGCTCTaGCAGCCGCTTAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AVEPLTAAASPRVGACTWLLPLL*QPLSLG
Trigger: GCCGAGGCTAAGCGGCTGGCAGAGCAGCGGGAGCAG...CCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGCTGTGCCGCACCGATTaGGAGTCCGTGCGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AVEPLTAAASPRVGACTWLCRTD*ESVREP
Trigger: GGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAG...CCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTCGCTCCTGCTCCCGCTaGTCTGCCAGCCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPRSCSR*SASRLA
Trigger: GGCTAAGCGGCTGGCAGAGCAGCGGGAGCAGGAGCG...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGCCGACGCTCCTGCTCTaGCAGCTGTCGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLPTLLL*QLSLLL
Trigger: GAGCAGGAGCGACAGCTGGCAGAGCAGGAGCGTCGG...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGCTCCAGCAGGTGAATaGGCCCTGGGGCCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPAPAGE*ALGPSS
Trigger: GGACGACGGCCCCAGGGCCCATTCACCTGCTGGAGC...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCCCTGAGCAGCACGGGTaGAGCCTGGGGAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: QQHLRGWGPAPGDPEAHRPEQHG*SLGNGE
Trigger: CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGG...GCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACTGCAGCTGCTCCTTCTaGAGCCGCAGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHCSCSF*SRRAFS
Trigger: GGAGAAGGCCCTGCGGCTGCAGAAGGAGCAGCTGCA...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGTTGCCCAGACCCACTTaGCTCCGGGCCTTCGGGACT +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLLPRPT*LRAFGT
Trigger: AGTCCCGAAGGCCCGGAGCCAAGTGGGTCTGGGCAA...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGCCTGGCACTCTGCGGTaGCTCTCTGGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLPGTLR*LSGSIC
Trigger: GCAGATGGACCCAGAGAGCCACCGCAGAGTGCCAGG...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGCCGTACCACCTTGCTaGCTGGGCAGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLAVPPC*LGRVRK
Trigger: CTTCCTCACCCTGCCCAGCCAGCAAGGTGGTACGGC...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGCAGCATCTCCGAGGGTaGGGGCCTGCACCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLQHLRG*GPAPGD
Trigger: ATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTG...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGAGCACGGGTGGAGCCTaGGGAATGGAGAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLSTGGA*GMERVG
Trigger: CCCTACCCTCTCCATTCCCCAGGCTCCACCCGTGCT...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCCTGAGCAGCACGGGTaGAGCCTGGGGAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHPEQHG*SLGNGE
Trigger: CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGG...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACCTGTGCCGCACCGATTaGGAGTCCGTGCGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHLCRTD*ESVREP
Trigger: GGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAG...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACACGTCCCCTGAAGGCTaGTCCGATCCAAGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHTSPEG*SDPSPV
Trigger: CACCGGACTTGGATCGGAGCAGCCTTCAGGGGACGT...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACTCTCTACACTGTCCTTaGTGCGGAGGCGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHSLHCP*CGGVGS
Trigger: GCTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGA...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACTTGGCCTTCTCCTCTaGCAGCCGCTCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEALGLLL*QPLLLG
Trigger: GCCAAGGAGGAGCGGCTGGCAGAGGAGAAGGCCAAG...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGCTCCAGCAGGTGAATaGGCCCTGGGGCCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHAPAGE*ALGPSS
Trigger: GGACGACGGCCCCAGGGCCCATTCACCTGCTGGAGC...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCACGTCGGGAGCTCAGCTaGCTGCTCCGAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSISEGGGLHLVILRHTARRELS*LLRDFL
Trigger: CAGAAAGTCTCGGAGCAGCCAGCTGAGCTCCCGACG...TGCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGCACCCGCTCCCGCCATaGAGAATCTGGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVEPLTAAASPRVGACTWHPLPP*RIWKGW
Trigger: CCAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTG...CCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTCGTCCTGCAGGCCACTaGTGGCCCAAGACACACAGC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPRPAGH*WPKTHS
Trigger: GCTGTGTGTCTTGGGCCACCAGTGGCCTGCAGGACG...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACCTACAGGGCTGGGACTaGGGCGCCCAGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHLQGWD*GAQSSW
Trigger: CCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAG...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGACGTCCCCTGAAGGCTaGTCCGATCCAAGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILTSPEG*SDPSPV
Trigger: CACCGGACTTGGATCGGAGCAGCCTTCAGGGGACGT...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCGGGAGCTCAGCTGGCTaGTCCGAGACTTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGGSSAG*SETFCG
Trigger: CCCGCAGAAAGTCTCGGAGCAGCCAGCTGAGCTCCC...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTAGAAGGTGCAGCCAATaGCATGGTAGCCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPRRCSQ*HGSRGS
Trigger: GCTGCCGCGGCTACCATGGCATTGGCTGCACCTTCT...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCAAGAAGGTGCAGCCAATaGCATGGTAGCCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEARRCSQ*HGSRGS
Trigger: GCTGCCGCGGCTACCATGGCATTGGCTGCACCTTCT...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGGTCTTGGCCTCTTGCTaGCCTGCAGAGGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AVEPLTAAASPRVGACTWVLASC*PAEGVS
Trigger: GGAAACACCCTCTGCAGGGCAGCAAGAGGCCAAGAC...CCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGAGGGGCCTCTGCTGCACAACTTAACACTGCCCTCGGAGCAGAGCAACTGTCCCGCCGACGCTCCTaGTCTGCCAGCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: HGGASAAQLNTALGAEQLSRRRS*SASCRS
Trigger: GGAGCGACAGCTGGCAGAGCAGGAGCGTCGGCGGGA...CAGTTGCTCTGCTCCGAGGGCAGTGTTAAGTTGTGCAGCAGAGGCCCCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCAAGTTCCCTCTGCAGCTaGTCCTTCTGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEASSLCS*SFCSRR
Trigger: CCTGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACT...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACGGGAGGTTGGAGCTGTaGCTGAAGCTGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHGRLEL*LKLESG
Trigger: CCCCGACTCCAGCTTCAGCCACAGCTCCAACCTCCC...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCCGCTCCCGCCATaGAGAATCTGGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEAHPLPP*RIWKGW
Trigger: CCAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTG...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTTCTGCGGTGGCTCTCTaGGTCCATCTGCTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPSAVAL*VHLLGP
Trigger: CGGACCAAGCAGATGGACCCAGAGAGCCACCGCAGA...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGCTGAGGTCGGGGTCATaGGCATCTGGTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILLRSGS*ASGSSA
Trigger: TGCAGAGGAACCAGATGCTCATGACCCCGACCTCAG...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTCTGAGGTCGGGGTCATaGGCATCTGGTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPLRSGS*ASGSSA
Trigger: TGCAGAGGAACCAGATGCTCATGACCCCGACCTCAG...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTACACTGTCCTTGCTaGGGAGGCGTCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGLHCPC*GGVGSS
Trigger: TGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGTAG...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCATCTTGGCAAGCCTTCTaGTCGCCCTGCGGACAACAC +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEASWQAF*SPCGQH
Trigger: GTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGA...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGCCTCTTGCTGCCCTaGAGAGGGTGTTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHGLLLP*RGCFRA
Trigger: AGCCCGGAAACACCCTCTGCAGGGCAGCAAGAGGCC...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTTCCGTCTTGGCCTCTTaGTGCCCTGCAGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPSVLAS*CPAEGV
Trigger: AACACCCTCTGCAGGGCAGCAAGAGGCCAAGACGGA...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTCTCTCTGGGTCCATCTaGTTGGTCCGTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPLSGSI*LVRLGL
Trigger: GAGGCCAAGACGGACCAAGCAGATGGACCCAGAGAG...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGCCTCCACCTTCTGCCTaGGCAGCTGCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGPPPSA*AAARPP
Trigger: AGGAGGCCGAGCAGCTGCGCAGGCAGAAGGTGGAGG...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGGACCCTGGCGCCCTaGAGGGGCGGTGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: YRAGTEAPSLHGINSRLEGTLAP*RGGEFQ
Trigger: CTGGAACTCACCGCCCCTGCAGGGCGCCAGGGTCCC...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCCCTCCACAATGGCATaGCAAGAAGGAGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHPSTMA*QEGGQQ
Trigger: CTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGG...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATTTGCCCAGACCCACTTaGCTCCGGGCCTTCGGGACT +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHLPRPT*LRAFGT
Trigger: AGTCCCGAAGGCCCGGAGCCAAGTGGGTCTGGGCAA...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGGGGCCGTCGTCCCCATaGTGGCTCTGTTCGACTGCG +
Preference number: 4 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGEGPSSP*WLCSTA
Trigger: CGCAGTCGAACAGAGCCACCATGGGGACGACGGCCC...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGCAGGTGAATGGGCCCTaGGGCCGTCGTCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGQVNGP*GRRPHG
Trigger: ACCATGGGGACGACGGCCCCAGGGCCCATTCACCTG...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGCTGGCGAGTCCCGTaGGCCAGGGGAGACCTGCGC +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGGWRVP*ARGDLR
Trigger: GCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCC...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCGGCTGGCGAGTCCCGTaGGCCAGGGGAGACCTGCGC +
Preference number: 4 (lower is better)
Translates to: EISRCLQALVPRWSQGIPGWRVP*ARGDLR
Trigger: GCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCC...GGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGTTCTGGGCTAAGACTTaGGGACTCGGGGAAGACGGG +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILFWAKT*GLGEDG
Trigger: CCCGTCTTCCCCGAGTCCCCAAGTCTTAGCCCAGAA...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTGGCCGCTCCTTCTCCTTaGGGTCCATGCGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ILRHTAGDGTVPSSCRPLAAPSP*GPCAGE
Trigger: CTCCCCTGCGCATGGACCCCAAGGAGAAGGAGCGGC...CAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278849.4
CDS-3UTR CCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCATCCAGACAGCAGAGCTaGTGCGCTTGTGATAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEASRQQS*CACDSG
Trigger: CCCGCTATCACAAGCGCACCAGCTCTGCTGTCTGGA...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGTGTAGGCCAGGCTGCTaGGGACCCTGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRCRPGC*GPWRPA
Trigger: TGCAGGGCGCCAGGGTCCCCAGCAGCCTGGCCTACA...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATCAGGCCATGTGGGGCTaGGCCCATTTCTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHQAMWG*AHFFPT
Trigger: GGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTG...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGAGAACCGACTGTGGCTaGATTTGGCCCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLRTDCG*IWPTGH
Trigger: ATGGCCTGTGGGCCAAATCCAGCCACAGTCGGTTCT...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGCTACAGGGCTGGGACTaGGGCGCCCAGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGLQGWD*GAQSSW
Trigger: CCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAG...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTCCACAGGCCATAGTTTaGCAACCCGGGGCTACAGTA +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPPQAIV*QPGATV
Trigger: TACTGTAGCCCCGGGTTGTCAAACTATGGCCTGTGG...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGAGTCGGGGACAGAGTaGGGGGCAGAGGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: YRAGTEAPSLHGINSRLEESGTE*GAEARW
Trigger: CCACCGAGCCTCTGCCCCGCACTCTGTCCCCGACTC...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGTCCTCCTCCACCTTCTaGCTGCGCAGCTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RCSQVHLHLSSTGGAWGMSSSTF*LRSCSA
Trigger: GGCCGAGCAGCTGCGCAGGCAGAAGGTGGAGGAGGA...CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTTTCCGCAGCCGCTCCTaGTCCTCTTCCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPFRSRS*SSSFFF
Trigger: GAAGAAGAAGGAAGAGGAGCAGGAGCGGCTGCGGAA...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATTCACATTCAGGGCCTTaGTGGCCCCTGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHSHSGP*WPLLPP
Trigger: AGGAGGCAGCAGGGGCCAGCAAGGCCCTGAATGTGA...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATAGGGACCCTGGCGCCCTaGAGGGGCGGTGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIGTLAP*RGGEFQ
Trigger: CTGGAACTCACCGCCCCTGCAGGGCGCCAGGGTCCC...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCAACTCCATGAGCTTCTaGTCACATAGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QQHLRGWGPAPGDPEAHRNSMSF*SHSSSR
Trigger: CCTGCTGGAGCTATGTGACCAGAAGCTCATGGAGTT...GCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACAGCTGGCACTGGGTGTaGTTATCCTCGGGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHSWHWV*LSSGFL
Trigger: TAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCT...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCATCGGTGGACATGAGCTaGGTGACATGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEASVDMS*VTCCSA
Trigger: TGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGA...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCTTCTGGGCTAAGACTTaGGGACTCGGGGAAGACGGG +
Preference number: 4 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGFWAKT*GLGEDG
Trigger: CCCGTCTTCCCCGAGTCCCCAAGTCTTAGCCCAGAA...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGGCCGTACCACCTTGCTaGCTGGGCAGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGAVPPC*LGRVRK
Trigger: CTTCCTCACCCTGCCCAGCCAGCAAGGTGGTACGGC...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CATGGAGGGGCCTCTGCTGCACAACTTAACACTGCCCTCGGAGCAGAGCAACTGCGTCCTGCAGGCCACTaGTGGCCCAAGACACACAGC +
Preference number: 4 (lower is better)
Translates to: HGGASAAQLNTALGAEQLRPAGH*WPKTHS
Trigger: GCTGTGTGTCTTGGGCCACCAGTGGCCTGCAGGACG...CAGTTGCTCTGCTCCGAGGGCAGTGTTAAGTTGTGCAGCAGAGGCCCCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp GCCTGGTTTTGCTGGGGAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGACGCTGCGTGGGGCTaGGGTCGGGGTCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: AWFCWGNISLLASTGPKVDAAWG*GRGHEH
Trigger: ATGCTCATGACCCCGACCTCAGCCCCACGCAGCGTC...CACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp AGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCACGGAGTCATCTGATATaGGGTACAAGCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SSISEGGGLHLVILRHTARSHLI*GTSWRL
Trigger: CAGTCTCCAGCTTGTACCTCATATCAGATGACTCCG...TGCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGCCTTGCGGAGTCATCTaGTATGAGGTACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVEPLTAAASPRVGACTWPCGVI*YEVQAG
Trigger: TCCAGCTTGTACCTCATATCAGATGACTCCGCAAGG...CCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCGTAGTTATCTGGGTTaGTCTTGGGAGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGRSYLG*SWEGPC
Trigger: ACAGGGCCCCTCCCAAGATCAACCCAGATAACTACG...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACGGGGCTTGCTCTTCTTaGAGATATCCTCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHGACSS*RYPPSP
Trigger: TGGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCC...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp ACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCGGTAGCCGCGGCAGCTaGAGCCGCAGCACGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TVTDVFLKGYPGSGTTHCGSRGS*SRSTGH
Trigger: GTGACCCGTGCTGCGGCTGCAGCTGCCGCGGCTACC...GCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGAGTCGGGGACAGAGTaGGGGGCAGAGGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGESGTE*GAEARW
Trigger: CCACCGAGCCTCTGCCCCGCACTCTGTCCCCGACTC...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACGCCTTCTGCTCGCCCTaGGGACAACACTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHAFCSP*GQHFPV
Trigger: AACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGC...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAGGGGCCGTACCACCTTaGTGGCTGGGCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGGAVPP*WLGRVR
Trigger: CCTCACCCTGCCCAGCCAGCAAGGTGGTACGGCCCC...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGAGATTCTCCAGGCGCTaGCGCTCCTTCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGERFSRR*RSFSLG
Trigger: CCCCAAGGAGAAGGAGCGGCAGCGCCTGGAGAATCT...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278849.4
CDS-3UTR GCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTCTGCTCCCGCTGCTCTaGCAGCCGCTTAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGLLPLL*QPLSLG
Trigger: GCCGAGGCTAAGCGGCTGGCAGAGCAGCGGGAGCAG...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATACGCTCCTGCTCCCGCTaGTCTGCCAGCCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIRSCSR*SASRLA
Trigger: GGCTAAGCGGCTGGCAGAGCAGCGGGAGCAGGAGCG...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGCCTGGAGCCGCTCCTaGTCCCGCCGACGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLAWSRS*SRRRSC
Trigger: GCAGGAGCGTCGGCGGGAGCAGGAGCGGCTCCAGGC...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp ATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTGAGTTCCCTCTGCAGCTaGTCCTTCTGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ILRHTAGDGTVPSSCRPLSSLCS*SFCSRR
Trigger: CCTGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACT...CAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTCTGCGGTGGCTCTCTaGGTCCATCTGCTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGSAVAL*VHLLGP
Trigger: CGGACCAAGCAGATGGACCCAGAGAGCCACCGCAGA...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGCATCCCGTAGTTATCTaGGTTGATCTTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILHPVVI*VDLGRG
Trigger: GCCCCTCCCAAGATCAACCCAGATAACTACGGGATG...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CATGGAGGGGCCTCTGCTGCACAACTTAACACTGCCCTCGGAGCAGAGCAACTGATGGGCTTCCGGGGATaGGCCTCATCATCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: HGGASAAQLNTALGAEQLMGFRG*ASSSVE
Trigger: CTCCACCGATGATGAGGCCCATCCCCGGAAGCCCAT...CAGTTGCTCTGCTCCGAGGGCAGTGTTAAGTTGTGCAGCAGAGGCCCCTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp ACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCGGGCCCAGGTGGGGATaGGCTTCCGGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: TVTDVFLKGYPGSGTTHCGPRWG*ASGDGP
Trigger: AGGCCCATCCCCGGAAGCCCATCCCCACCTGGGCCC...GCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTTGTAGGCCAGGCTGCTaGGGACCCTGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGCRPGC*GPWRPA
Trigger: TGCAGGGCGCCAGGGTCCCCAGCAGCCTGGCCTACA...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGCAGAGAAACTCCATaGGCTTCTGGTCACATAGCT +
Preference number: 4 (lower is better)
Translates to: AVEPLTAAASPRVGACTWCRETP*ASGHIA
Trigger: AGCTATGTGACCAGAAGCTCATGGAGTTTCTCTGCA...CCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTCCTTGCGGAGTCATCTaGTATGAGGTACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPPCGVI*YEVQAG
Trigger: TCCAGCTTGTACCTCATATCAGATGACTCCGCAAGG...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp AGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCACATCGTGACAGTAACTaGCGTGTTCCTCAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: SSISEGGGLHLVILRHTAHRDSN*RVPQGL
Trigger: TAACCCTTGAGGAACACGTCAGTTACTGTCACGATG...TGCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGAAGTCCATTTGCACCTaGGCAGCACGGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGEKSICT*AARVEP
Trigger: AGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTT...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCGGGAGCTCAGCTGGCTaGTCCGAGACTTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFGSSAG*SETFCG
Trigger: CCCGCAGAAAGTCTCGGAGCAGCCAGCTGAGCTCCC...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACCGATTGAGAGTCCGTaGGAGAGCCCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPPIESP*ESPWAW
Trigger: CCACGCCCACGGGCTCTCGCACGGACTCTCAATCGG...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp ATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTGCTCTCTGGGTCCATCTaGTTGGTCCGTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ILRHTAGDGTVPSSCRPLLSGSI*LVRLGL
Trigger: GAGGCCAAGACGGACCAAGCAGATGGACCCAGAGAG...CAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATACCTCCACCTTCTGCCTaGGCAGCTGCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIPPPSA*AAARPP
Trigger: AGGAGGCCGAGCAGCTGCGCAGGCAGAAGGTGGAGG...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCTCCTCCTCCACCTTCTaGCTGCGCAGCTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFSSSTF*LRSCSA
Trigger: GGCCGAGCAGCTGCGCAGGCAGAAGGTGGAGGAGGA...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGCGTGCCTCCTCTTCCTaGTTCCTGCGTGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRRASSS*FLRAST
Trigger: GGTGGAAGCACGCAGGAAGCAGGAAGAGGAGGCACG...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAAGCCTTCTCCCGCTCCTaGAGCTCCCTCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQAFSRS*SSLSAW
Trigger: CCAGGCCGAGAGGGAGCTGCAGGAGCGGGAGAAGGC...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGTCACATTCAGGGCCTTaGTGGCCCCTGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RCSQVHLHLSSTGGAWGMSHSGP*WPLLPP
Trigger: AGGAGGCAGCAGGGGCCAGCAAGGCCCTGAATGTGA...CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGAAGGAGCTCCACCTaGCCCATCGTGACAGTAACT +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHGRSST*PIVTVT
Trigger: AGTTACTGTCACGATGGGGCAGGTGGAGCTCCTTCC...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGACCACAGGCACCAGCTaGCACTGGGTGTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGTTGTS*HWVWLS
Trigger: GGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGT...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGAGAATCTGGAAAGGCTaGCGAGTCCCGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRRIWKG*RVPWAR
Trigger: CCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCT...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGAGAGCCCGTGGGCGTaGAGAAGTTATCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRESPWA*RSYPAG
Trigger: TCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTC...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGTTCTCAGGGACCTCTaGCTCAGCTGCCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: YRAGTEAPSLHGINSRLEVLRDL*LSCRHR
Trigger: CCTGTGGCGGCAGCTGAGCCAGAGGTCCCTGAGAAC...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGGGTTGGGTGTGCTGTTaGCAATCTCCGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILGWVCC*QSPCHC
Trigger: ACAATGACACGGAGATTGCCAACAGCACACCCAACC...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGCTGGGTCCATCTGCTTaGTCCGTCTTGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGLGPSA*SVLASC
Trigger: GCAAGAGGCCAAGACGGACCAAGCAGATGGACCCAG...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGCTGGGTCCATCTGCTTaGTCCGTCTTGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGELGPSA*SVLASC
Trigger: GCAAGAGGCCAAGACGGACCAAGCAGATGGACCCAG...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGGTTATCCAGGCAGTaGAACCACTCACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHGLSRQ*NHSLQQ
Trigger: CTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCC...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGTTAAAGAACCGACTGTaGCTGGATTTGGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILLKNRL*LDLAHR
Trigger: CCTGTGGGCCAAATCCAGCCACAGTCGGTTCTTTAA...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTTGCAGAGAAACTCCATaGGCTTCTGGTCACATAGCT +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPCRETP*ASGHIA
Trigger: AGCTATGTGACCAGAAGCTCATGGAGTTTCTCTGCA...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATACCTGCTGCAGCCACCTaGGCCTACGTGCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIPAAAT*AYVPPL
Trigger: AAGAGGAGGCACGTAGGCTCAGGTGGCTGCAGCAGG...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAAGCCCTGCAGGGGCGGTaGGTTCCAGACAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQALQGR*VPDSRA
Trigger: AGCTCTGCTGTCTGGAACTCACCGCCCCTGCAGGGC...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGCCAGGTCTTTCCCAATaGACAAACTCCCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLPGLSQ*TNSPLQ
Trigger: TTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGG...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACGGTAGCCGCGGCAGCTaGAGCCGCAGCACGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHGSRGS*SRSTGH
Trigger: GTGACCCGTGCTGCGGCTGCAGCTGCCGCGGCTACC...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTAGGGTGTTTCCGGGCTaGTGGCTGCAGGCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGRVFPG*WLQASG
Trigger: ACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCT...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCCGGCCTGCTTGTAGCTaGGCTTCCTCCTGGCACTCT +
Preference number: 4 (lower is better)
Translates to: AAETPSTEDVYIHLAKPSRPACS*ASSWHS
Trigger: AGAGTGCCAGGAGGAAGCGCAGCTACAAGCAGGCCG...GGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp ACTGCCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGGGGCCGTACCACCTTaGTGGCTGGGCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TALGAEQLETTMEMGISIGAVPP*WLGRVR
Trigger: CCTCACCCTGCCCAGCCAGCAAGGTGGTACGGCCCC...AATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAAGGGCCTGCAGCACCTTaGGGAGGCGTTCCTCACGCT +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQGPAAP*GGVPHA
Trigger: AGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCC...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCAGGACCACAGCCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGACCCGCTCGCGGGCCTaGAGCACCTTGCGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: AGPQPAFIGSKHLISSCLTRSRA*STLRRR
Trigger: ACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGT...CAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGGCTGTGGTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp CCCGGGGCTACAGTAGCAGATATATGCATTCAGAAGGCAGCAGTAGGCAGCTCACTTGGCCTTCTCCTCTaGCAGCCGCTCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGATVADICIQKAAVGSSLGLLL*QPLLLG
Trigger: GCCAAGGAGGAGCGGCTGGCAGAGGAGAAGGCCAAG...TGAGCTGCCTACTGCTGCCTTCTGAATGCATATATCTGCTACTGTAGCCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACTCAGCCAGACGCTGCTaGTCTTCCTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHSARRC*SSFFFF
Trigger: GAAGAAGAAGAAGGAAGAGCAGCAGCGTCTGGCTGA...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGACAGTACCTTCGTCCTaGAGGCCACTGGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: RCSQVHLHLSSTGGAWGMTVPSS*RPLVAQ
Trigger: TTGGGCCACCAGTGGCCTGCAGGACGAAGGTACTGT...CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp ATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTGGGAAGGAGCTCCACCTaGCCCATCGTGACAGTAACT +
Preference number: 4 (lower is better)
Translates to: ILRHTAGDGTVPSSCRPLGRSST*PIVTVT
Trigger: AGTTACTGTCACGATGGGGCAGGTGGAGCTCCTTCC...CAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATACCGTCGTCCCCATGGTaGCTCTGTTCGACTGCGCCA +
Preference number: 4 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIPSSPW*LCSTAP
Trigger: TGGCGCAGTCGAACAGAGCCACCATGGGGACGACGG...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACCGTCGTCCCCATGGTaGCTCTGTTCGACTGCGCCA +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPPSSPW*LCSTAP
Trigger: TGGCGCAGTCGAACAGAGCCACCATGGGGACGACGG...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAGGGAGGTTGGAGCTGTaGCTGAAGCTGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGGRLEL*LKLESG
Trigger: CCCCGACTCCAGCTTCAGCCACAGCTCCAACCTCCC...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACGGGCCCAGGTGGGGATaGGCTTCCGGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHGPRWG*ASGDGP
Trigger: AGGCCCATCCCCGGAAGCCCATCCCCACCTGGGCCC...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAAGAAGGAGGGCAACAGACCAAGACAGAGACCGACAGACAGACAGATAGACATTGCCTCGGGCCCAGGTaGGGATGGGCTTCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QEGGQQTKTETDRQTDRHCLGPR*GWASGD
Trigger: ATCCCCGGAAGCCCATCCCCACCTGGGCCCGAGGCA...ATGTCTATCTGTCTGTCTGTCGGTCTCTGTCTTGGTCTGTTGCCCTCCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTACGTTTATATACACCTaGCCAAGCCCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPTFIYT*PSPPQW
Trigger: CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGT...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGACAGCATCTCCGAGGGTaGGGGCCTGCACCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGQHLRG*GPAPGD
Trigger: ATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTG...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCAAGCACGGGTGGAGCCTaGGGAATGGAGAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPSTGGA*GMERVG
Trigger: CCCTACCCTCTCCATTCCCCAGGCTCCACCCGTGCT...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCGGTAACTGTGACAGATaGTGCGGCCAGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AAETPSTEDVYIHLAKPSGNCDR*CGQRQL
Trigger: CAGCTGCCTCTGGCCGCATCATCTGTCACAGTTACC...GGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCGGTAACTGTGACAGATaGTGCGGCCAGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFGNCDR*CGQRQL
Trigger: CAGCTGCCTCTGGCCGCATCATCTGTCACAGTTACC...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGATGAGCTGGGTGACATaGTGCTCAGCATTCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRMSWVT*CSAFWR
Trigger: GCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCAT...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGCTTCGGGTTGGGTGTaGTGTTGGCAATCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RCSQVHLHLSSTGGAWGMASGWV*CWQSPC
Trigger: ACACGGAGATTGCCAACAGCACACCCAACCCGAAGC...CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATGGGGCCTCTTGCTGCCCTaGAGAGGGTGTTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KHPAQRTFIYTWPSPPQWGLLLP*RGCFRA
Trigger: AGCCCGGAAACACCCTCTGCAGGGCAGCAAGAGGCC...CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACGGCCTGCTTGTAGCTaGGCTTCCTCCTGGCACTCT +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPRPACS*ASSWHS
Trigger: AGAGTGCCAGGAGGAAGCGCAGCTACAAGCAGGCCG...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGGGGCCTGCAGCACCTTaGGGAGGCGTTCCTCACGCT +
Preference number: 4 (lower is better)
Translates to: PRSRATGDNNGNGHFHCLGPAAP*GGVPHA
Trigger: AGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCC...CAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTGCAGCTGCTCCTTCTaGAGCCGCAGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISCSCSF*SRRAFS
Trigger: GGAGAAGGCCCTGCGGCTGCAGAAGGAGCAGCTGCA...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGAGGGGCCTCTGCTGCACAACTTAACACTGCCCTCGGAGCAGAGCAACTGGCAGCTGCCTGGTTTTaGTGGGGAAATATCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HGGASAAQLNTALGAEQLAAAWF*WGNISL
Trigger: CAGCGAGATATTTCCCCAGCAAAACCAGGCAGCTGC...CAGTTGCTCTGCTCCGAGGGCAGTGTTAAGTTGTGCAGCAGAGGCCCCTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTTTTGGGCATCAGCTCTaGCTCTTTGCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPFGHQL*LFAEFS
Trigger: AGAGAATTCAGCAAAGAGCCAGAGCTGATGCCCAAA...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTGAGCTGGCACTGGGTGTaGTTATCCTCGGGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ILRHTAGDGTVPSSCRPLSWHWV*LSSGFL
Trigger: TAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCT...CAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAAGGCACCAGCTGGCACTaGGTGTGGTTATCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQGTSWH*VWLSSG
Trigger: GCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCC...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATGGCCGTGCGAGAGCCCGTaGGCGTGGAGAAGTTATCCG +
Preference number: 4 (lower is better)
Translates to: KHPAQRTFIYTWPSPPQWPCESP*AWRSYP
Trigger: CGGATAACTTCTCCACGCCCACGGGCTCTCGCACGG...CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAACTTCGGCAGTCTTCTTaGCAAGCCTTCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: YRAGTEAPSLHGINSRLELRQSS*QAFCSP
Trigger: GGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAG...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACTGCCTCGGGCCCAGGTaGGGATGGGCTTCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHCLGPR*GWASGD
Trigger: ATCCCCGGAAGCCCATCCCCACCTGGGCCCGAGGCA...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTCGACGAAGCTGCACTTaGGGTCCATGCGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISRRSCT*GPCAGE
Trigger: CTCCCCTGCGCATGGACCCCAAGTGCAGCTTCGTCG...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp GGGCCTCTGCTGCACAACTTAACACTGCCCTCGGAGCAGAGCAACTGGAGACAAGCACTGGTCCCAAGGTaGTCTCAAGGGATACCCCTT +
Preference number: 4 (lower is better)
Translates to: GPLLHNLTLPSEQSNWRQALVPR*SQGIPL
Trigger: AAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGC...TTGTCTCCAGTTGCTCTGCTCCGAGGGCAGTGTTAAGTTGTGCAGCAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCCGTAGTTATCTGGGTTaGTCTTGGGAGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFRSYLG*SWEGPC
Trigger: ACAGGGCCCCTCCCAAGATCAACCCAGATAACTACG...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACGCCCTGCAGGGGCGGTaGGTTCCAGACAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHALQGR*VPDSRA
Trigger: AGCTCTGCTGTCTGGAACTCACCGCCCCTGCAGGGC...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCAGAGGCACACCGCAGGTaGTGGAACAGTACCTTCGTC +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPEAHRR*WNSTFV
Trigger: GACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTC...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAAGCTGGGTGACATGCTaGTCAGCATTCTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: YRAGTEAPSLHGINSRLESWVTC*SAFWRS
Trigger: TGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCT...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCAGTCTTGGCCTCTTGCTaGCCTGCAGAGGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPVLASC*PAEGVS
Trigger: GGAAACACCCTCTGCAGGGCAGCAAGAGGCCAAGAC...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCATCATCCTCCAGGTGCTaGTCCTCGTCCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPSSSRC*SSSSSL
Trigger: GAGTGAGCTGGACGAGGAGCAGCACCTGGAGGATGA...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CACCTGGTGATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGCATCTGGTTCCTCTaGACTGTGTGCAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: HLVILRHTAGDGTVPSSCSIWFL*TVCRKV
Trigger: GACCTTTCTGCACACAGTGCAGAGGAACCAGATGCT...GCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGATCACCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTACCCGCTCGCGGGCCTaGAGCACCTTGCGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFITRSRA*STLRRR
Trigger: ACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGT...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTCCACCTGAGCCTACGTaGCTCCTCTTCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGPPEPT*LLFLLP
Trigger: AGGAAGCAGGAAGAGGAGGCACGTAGGCTCAGGTGG...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATCTTCCTCCTCCTGCTaGAGCCACCTGAGCCTACGT +
Preference number: 4 (lower is better)
Translates to: AGTEAPSLHGINSRLEGISSSSC*SHLSLR
Trigger: ACGTAGGCTCAGGTGGCTGCAGCAGGAGGAGGAAGA...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTTTCTCTTGCTCCTCCTaGAGCTGCCGCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGFSCSS*SCRSAR
Trigger: TCTGGCTGAGCGGCAGCTGCAGGAGGAGCAAGAGAA...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGACTTGCTGGCCCCTGCTaGCTCCTTGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGLAGPC*LLGFLL
Trigger: GAGAAGAAAGCCAAGGAGGCAGCAGGGGCCAGCAAG...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCAAGACAGCAGAGCTGGTaGGCTTGTGATAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPRQQSW*ACDSGA
Trigger: AGCCCCGCTATCACAAGCGCACCAGCTCTGCTGTCT...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCACAGTACCTTCGTCCTaGAGGCCACTGGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFTVPSS*RPLVAQ
Trigger: TTGGGCCACCAGTGGCCTGCAGGACGAAGGTACTGT...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCAGATTCTCCAGGCGCTaGCGCTCCTTCTCGACGAAG +
Preference number: 4 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFRFSRR*RSFSTK
Trigger: CTTCGTCGAGAAGGAGCGGCAGCGCCTGGAGAATCT...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp TGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCTACTCACGTCGGGAGCTCAGCTaGCTGCTCCGAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: CLQALVPRWSQGIPLFYSRRELS*LLRDFL
Trigger: CAGAAAGTCTCGGAGCAGCCAGCTGAGCTCCCGACG...TGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCTGGGAGACTCAGGGGTaGGTGAAGAAGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFWETQG*VKKVQP
Trigger: TGGCTGCACCTTCTTCACCCACCCCTGAGTCTCCCA...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCGAGAGCCCGTGGGCGTaGAGAAGTTATCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVTDVFLKGYPGSGTTHCESPWA*RSYPAG
Trigger: TCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTC...GCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATATCTCCGTGTCATTGTaGGGCCACGAGTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHISVSL*GHELFP
Trigger: TGGAAATAACTCGTGGCCCCACAATGACACGGAGAT...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATAGTCCAGTGGGAGAATaGTTCCAAAGAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHSPVGE*FQRAPE
Trigger: TTCTGGAGCTCTTTGGAACCATTCTCCCACTGGACT...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CAA 72 bp CATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTaGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: HASPAHRCSQVH*HLSSTGGAWGM
Trigger: CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAACATTCTGGCGCTCACTaGTGCCGATCTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQHSGAH*CRSPPQ
Trigger: CTGTGGTGGAGATCGGCATCAGTGAGCGCCAGAATG...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGATCAGGGAGCTCACTGTaGTGGACTCCAGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGSGSSL*WTPVSW
Trigger: CCAGGATACTGGAGTCCATCACAGTGAGCTCCCTGA...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCAGGACCACAGCCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGCCTGCTGCAGCCACCTaGGCCTACGTGCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGPQPAFIGSKHLISSCLPAAAT*AYVPPL
Trigger: AAGAGGAGGCACGTAGGCTCAGGTGGCTGCAGCAGG...CAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGGCTGTGGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp AAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATGGAAGTCCATTTGCACCTaGGCAGCACGGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KHPAQRTFIYTWPSPPQWKSICT*AARVEP
Trigger: AGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTT...CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAACCGATTGAGAGTCCGTaGGAGAGCCCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKPIESP*ESPWAW
Trigger: CCACGCCCACGGGCTCTCGCACGGACTCTCAATCGG...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCGCCTTCTGCTCGCCCTaGGGACAACACTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: EISRCLQALVPRWSQGIPAFCSP*GQHFPV
Trigger: AACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGC...GGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp ACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGACAGCAGAGCTGGTaGGCTTGTGATAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TVTDVFLKGYPGSGTTHCRQQSW*ACDSGA
Trigger: AGCCCCGCTATCACAAGCGCACCAGCTCTGCTGTCT...GCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAAGACAGGAGGCGAGGCTaGCAAGAAGGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKDRRRG*QEGRRP
Trigger: TGGCCTGCGGCCTTCTTGGCAGCCTCGCCTCCTGTC...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATTACAGAGCACTGTCTaGAGGCCATGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQLQSTV*RPCGAG
Trigger: CCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAA...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCAACAGTAGCAGATATATaGATTCAGAAGGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEATVADI*IQKAAV
Trigger: TACTGCTGCCTTCTGAATGCATATATCTGCTACTGT...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTCTGAGAAGGTGTTTTaGGCATCAGCTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PQGLSRQWNHSLQQHLRGSEKVF*ASALAL
Trigger: AAGAGCCAGAGCTGATGCCCAAAACACCTTCTCAGA...CCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGCGGCCAGAGGCAGCTaGCTCTTCGGCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLAARGS*LFGSLL
Trigger: AAGAAGACTGCCGAAGAGCCAGCTGCCTCTGGCCGC...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp CTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGGAGAGATCTCCGTGTCATTGTaGGGCCACGAGTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSPFAPEQHGWSLGNGEISVSL*GHELFP
Trigger: TGGAAATAACTCGTGGCCCCACAATGACACGGAGAT...CTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCCATCCCGTAGTTATCTaGGTTGATCTTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFHPVVI*VDLGRG
Trigger: GCCCCTCCCAAGATCAACCCAGATAACTACGGGATG...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGCTCCAGAAGGTTCGGTaGGTGGTAGTACTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRLQKVR*VVVLVN
Trigger: ATTCACCAGTACTACCACCCACCGAACCTTCTGGAG...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp AAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATGGTGTCTGCAGGCCATGTaGGGCTGGGCCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: KHPAQRTFIYTWPSPPQWCLQAM*GWAHFF
Trigger: GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACA...CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCGGGTTATCCAGGCAGTaGAACCACTCACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFGLSRQ*NHSLQQ
Trigger: CTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCC...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGCTGCCTGGTTTTGCTaGGGAAATATCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRAAWFC*GNISLL
Trigger: AAGCAGCGAGATATTTCCCCAGCAAAACCAGGCAGC...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGACAACAATGGAAATaGGCATTTCCATTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: TTHCSSISEGGGLHLVILRQQWK*AFPLLV
Trigger: CACAAGCAATGGAAATGCCCATTTCCATTGTTGTCT...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394818.8
3UTR CAA 72 bp CAGCTGCCTGGTTTTGCTGGGGAAATATCTCGCTGCTaGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATA +
Preference number: 4 (lower is better)
Translates to: QLPGFAGEISRC*QALVPRWSQGI
Trigger: TATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp GCAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCCGGAGTCATCTGATATaGGGTACAAGCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: AAETPSTEDVYIHLAKPSRSHLI*GTSWRL
Trigger: CAGTCTCCAGCTTGTACCTCATATCAGATGACTCCG...GGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGAGGCACACCGCAGGTaGTGGAACAGTACCTTCGTC +
Preference number: 4 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLEAHRR*WNSTFV
Trigger: GACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTC...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACTCTCTACACTGTCCTTaGTGCGGAGGCGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHSLHCP*CGGVGS
Trigger: GCTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGA...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTAGCTGGGTGACATGCTaGTCAGCATTCTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISSWVTC*SAFWRS
Trigger: TGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCT...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAAGAAGGAGGGCAACAGACCAAGACAGAGACCGACAGACAGACAGATAGACATTCTTGGCAAGCCTTCTaGTCGCCCTGCGGACAACAC +
Preference number: 4 (lower is better)
Translates to: QEGGQQTKTETDRQTDRHSWQAF*SPCGQH
Trigger: GTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGA...ATGTCTATCTGTCTGTCTGTCGGTCTCTGTCTTGGTCTGTTGCCCTCCTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTGCTTCGGGTTGGGTGTaGTGTTGGCAATCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISASGWV*CWQSPC
Trigger: ACACGGAGATTGCCAACAGCACACCCAACCCGAAGC...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GCCTGGTTTTGCTGGGGAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGAGCATCTGGTTCCTCTaGACTGTGTGCAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AWFCWGNISLLASTGPKVSIWFL*TVCRKV
Trigger: GACCTTTCTGCACACAGTGCAGAGGAACCAGATGCT...CACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp TGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCTACTCATTCCGCAGCCGCTCCTaGTCCTCTTCCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLQALVPRWSQGIPLFYSFRSRS*SSSFFF
Trigger: GAAGAAGAAGGAAGAGGAGCAGGAGCGGCTGCGGAA...TGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTCCGACGCTCCTGCTCTaGCAGCTGTCGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFIPTLLL*QLSLLL
Trigger: GAGCAGGAGCGACAGCTGGCAGAGCAGGAGCGTCGG...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTGACAGGAGGCGAGGCTaGCAAGAAGGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFIDRRRG*QEGRRP
Trigger: TGGCCTGCGGCCTTCTTGGCAGCCTCGCCTCCTGTC...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCAACTCCATGAGCTTCTaGTCACATAGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRCLQALVPRWSQGIPLFNSMSF*SHSSSR
Trigger: CCTGCTGGAGCTATGTGACCAGAAGCTCATGGAGTT...GAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGTGGGAGACTCAGGGGTaGGTGAAGAAGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PRSRATGDNNGNGHFHCLWETQG*VKKVQP
Trigger: TGGCTGCACCTTCTTCACCCACCCCTGAGTCTCCCA...CAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTGCTGCTCAGCATTCTaGCGCTCACTGATGCCGATC +
Preference number: 4 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISCCSAF*RSLMPI
Trigger: GATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCA...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATCGGTGGACATGAGCTaGGTGACATGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQSVDMS*VTCCSA
Trigger: TGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGA...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAAGTTCTCAGGGACCTCTaGCTCAGCTGCCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKVLRDL*LSCRHR
Trigger: CCTGTGGCGGCAGCTGAGCCAGAGGTCCCTGAGAAC...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGTCCAGACAGCAGAGCTaGTGCGCTTGTGATAGCGGG +
Preference number: 4 (lower is better)
Translates to: PRSRATGDNNGNGHFHCLSRQQS*CACDSG
Trigger: CCCGCTATCACAAGCGCACCAGCTCTGCTGTCTGGA...CAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAACAGGCCATGTGGGGCTaGGCCCATTTCTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKQAMWG*AHFFPT
Trigger: GGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTG...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGTCGGAGCAGAGCAACTaGAGACAACAATGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRSEQSN*RQQWKW
Trigger: CCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGA...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp CAAGAAGGAGGGCAACAGACCAAGACAGAGACCGACAGACAGACAGATAGACATTCAGGGAGCTCACTGTaGTGGACTCCAGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: QEGGQQTKTETDRQTDRHSGSSL*WTPVSW
Trigger: CCAGGATACTGGAGTCCATCACAGTGAGCTCCCTGA...ATGTCTATCTGTCTGTCTGTCGGTCTCTGTCTTGGTCTGTTGCCCTCCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACTCCGTCTTGGCCTCTTaGTGCCCTGCAGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHSVLAS*CPAEGV
Trigger: AACACCCTCTGCAGGGCAGCAAGAGGCCAAGACGGA...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCTACTCAGGGGAAATATCTCGCTaGTTGCAAGCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CLQALVPRWSQGIPLFYSGEISR*LQALVP
Trigger: TGGGACCAGTGCTTGCAAGCAGCGAGATATTTCCCC...TGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp AGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGTTTGGGCATCAGCTCTaGCTCTTTGCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: RCSQVHLHLSSTGGAWGMFGHQL*LFAEFS
Trigger: AGAGAATTCAGCAAAGAGCCAGAGCTGATGCCCAAA...CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTGGCACCAGCTGGCACTaGGTGTGGTTATCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFIGTSWH*VWLSSG
Trigger: GCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCC...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGTGCTGCTCAGCATTCTaGCGCTCACTGATGCCGATC +
Preference number: 4 (lower is better)
Translates to: PRSRATGDNNGNGHFHCLCCSAF*RSLMPI
Trigger: GATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCA...CAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCCTGGCACTCTGCGGTaGCTCTCTGGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLPGTLR*LSGSIC
Trigger: GCAGATGGACCCAGAGAGCCACCGCAGAGTGCCAGG...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGAGCTGCGCTTCCTCCTaGCACTCTGCGGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLSCASS*HSAVAL
Trigger: GAGAGCCACCGCAGAGTGCCAGGAGGAAGCGCAGCT...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAGCTGCGCTTCCTCCTaGCACTCTGCGGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFISCASS*HSAVAL
Trigger: GAGAGCCACCGCAGAGTGCCAGGAGGAAGCGCAGCT...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp GCCTGGTTTTGCTGGGGAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGGGATAACCTTCTCCTaGTGGGATCTCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: AWFCWGNISLLASTGPKVGITFS*WDLCFH
Trigger: ATGAAAACAGAGATCCCATCAGGAGAAGGTTATCCC...CACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp GGAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCATCGTGACAGTAACTaGCGTGTTCCTCAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GNISLLASTGPKVVSRDTHRDSN*RVPQGL
Trigger: TAACCCTTGAGGAACACGTCAGTTACTGTCACGATG...GGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAAGGCTGTAGGCCAGGCTaGTGGGGACCCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKGCRPG*WGPWRP
Trigger: AGGGCGCCAGGGTCCCCAGCAGCCTGGCCTACAGCC...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GGGCCTCTGCTGCACAACTTAACACTGCCCTCGGAGCAGAGCAACTGGAGACAACATTTAATTAGCAGCTaGCTGGTTTTGCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GPLLHNLTLPSEQSNWRQHLISS*LVLLGK
Trigger: TTTCCCCAGCAAAACCAGGCAGCTGCTAATTAAATG...TTGTCTCCAGTTGCTCTGCTCCGAGGGCAGTGTTAAGTTGTGCAGCAGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAACTTCGGCAGTCTTCTTaGCAAGCCTTCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKLRQSS*QAFCSP
Trigger: GGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAG...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTATGGGCTTCCGGGGATaGGCCTCATCATCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFIMGFRG*ASSSVE
Trigger: CTCCACCGATGATGAGGCCCATCCCCGGAAGCCCAT...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCACGTTTATATACACCTaGCCAAGCCCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFTFIYT*PSPPQW
Trigger: CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGT...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAATGTCTGCAGGCCATGTaGGGCTGGGCCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKCLQAM*GWAHFF
Trigger: GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACA...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCCCTTTTCTACTCAATATTCAGCTTTGCATaGAGGGGCCTCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CLQALVPRWSQGIPLFYSIFSFA*RGLCCT
Trigger: TGTGCAGCAGAGGCCCCTCCATGCAAAGCTGAATAT...TGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGGGGCTTGCTCTTCTTaGAGATATCCTCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLGACSS*RYPPSP
Trigger: TGGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCC...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAATCCCGCCGACGCTCCTaGTCTGCCAGCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKSRRRS*SASCRS
Trigger: GGAGCGACAGCTGGCAGAGCAGGAGCGTCGGCGGGA...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGTTCTCTTGCTCCTCCTaGAGCTGCCGCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLFSCSS*SCRSAR
Trigger: TCTGGCTGAGCGGCAGCTGCAGGAGGAGCAAGAGAA...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGTTACAGAGCACTGTCTaGAGGCCATGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLLQSTV*RPCGAG
Trigger: CCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAA...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTACCAGAGAGTACTTCTaGGCTAAGACTTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLTREYF*AKTWGL
Trigger: GAGTCCCCAAGTCTTAGCCCAGAAGTACTCTCTGGT...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCAGAACCAACTTTCTaGGGCACCTCAACATTCAGG +
Preference number: 4 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISSEPTF*GTSTFR
Trigger: CCTGAATGTTGAGGTGCCCCAGAAAGTTGGTTCTGA...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp ACTGCCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGGTTGGGTGTGCTGTTaGCAATCTCCGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TALGAEQLETTMEMGISIGWVCC*QSPCHC
Trigger: ACAATGACACGGAGATTGCCAACAGCACACCCAACC...AATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACGGGCCTCATCATCGGTaGAGTCGTCGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHGPHHR*SRRYSD
Trigger: ATCTGAATAGCGACGACTCCACCGATGATGAGGCCC...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp ACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCGGGATAACCTTCTCCTaGTGGGATCTCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TVTDVFLKGYPGSGTTHCGITFS*WDLCFH
Trigger: ATGAAAACAGAGATCCCATCAGGAGAAGGTTATCCC...GCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR TCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAAGACGCTGCGTGGGGCTaGGGTCGGGGTCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKDAAWG*GRGHEH
Trigger: ATGCTCATGACCCCGACCTCAGCCCCACGCAGCGTC...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTATGAGCTGGGTGACATaGTGCTCAGCATTCTGGCGC +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFIMSWVT*CSAFWR
Trigger: GCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCAT...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp AAAGTTCAAATAGTAAACATATTCAGCTTTGCATGGAGGGGCCTCTGCTGCACACTTGCTGGCCCCTGCTaGCTCCTTGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KVQIVNIFSFAWRGLCCTLAGPC*LLGFLL
Trigger: GAGAAGAAAGCCAAGGAGGCAGCAGGGGCCAGCAAG...TGTGCAGCAGAGGCCCCTCCATGCAAAGCTGAATATGTTTACTATTTGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACACCAGAGAGTACTTCTaGGCTAAGACTTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHTREYF*AKTWGL
Trigger: GAGTCCCCAAGTCTTAGCCCAGAAGTACTCTCTGGT...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAAGGGCCTCATCATCGGTaGAGTCGTCGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKGPHHR*SRRYSD
Trigger: ATCTGAATAGCGACGACTCCACCGATGATGAGGCCC...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAATCAGCCAGACGCTGCTaGTCTTCCTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKSARRC*SSFFFF
Trigger: GAAGAAGAAGAAGGAAGAGCAGCAGCGTCTGGCTGA...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACTCTGAGAAGGTGTTTTaGGCATCAGCTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHSEKVF*ASALAL
Trigger: AAGAGCCAGAGCTGATGCCCAAAACACCTTCTCAGA...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAACCGTGCGAGAGCCCGTaGGCGTGGAGAAGTTATCCG +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKPCESP*AWRSYP
Trigger: CGGATAACTTCTCCACGCCCACGGGCTCTCGCACGG...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGTGCCTCCTCTTCCTaGTTCCTGCGTGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKRASSS*FLRAST
Trigger: GGTGGAAGCACGCAGGAAGCAGGAAGAGGAGGCACG...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAAAGAATCTGGAAAGGCTaGCGAGTCCCGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKRIWKG*RVPWAR
Trigger: CCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCT...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAAGCGGCCAGAGGCAGCTaGCTCTTCGGCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKAARGS*LFGSLL
Trigger: AAGAAGACTGCCGAAGAGCCAGCTGCCTCTGGCCGC...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAATCAGAACCAACTTTCTaGGGCACCTCAACATTCAGG +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKSEPTF*GTSTFR
Trigger: CCTGAATGTTGAGGTGCCCCAGAAAGTTGGTTCTGA...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAACTGCTTGGTCCGTCTTaGCCTCTTGCTGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKLLGPS*PLAALQ
Trigger: CTGCAGGGCAGCAAGAGGCCAAGACGGACCAAGCAG...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTCTCCAGAAGGTTCGGTaGGTGGTAGTACTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: EAPSLHGINSRLEGIYFILQKVR*VVVLVN
Trigger: ATTCACCAGTACTACCACCCACCGAACCTTCTGGAG...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAAAGTCCAGTGGGAGAATaGTTCCAAAGAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKSPVGE*FQRAPE
Trigger: TTCTGGAGCTCTTTGGAACCATTCTCCCACTGGACT...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAATCATCCTCCAGGTGCTaGTCCTCGTCCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKSSSRC*SSSSSL
Trigger: GAGTGAGCTGGACGAGGAGCAGCACCTGGAGGATGA...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAACCACCTGAGCCTACGTaGCTCCTCTTCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKPPEPT*LLFLLP
Trigger: AGGAAGCAGGAAGAGGAGGCACGTAGGCTCAGGTGG...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAATCTTCCTCCTCCTGCTaGAGCCACCTGAGCCTACGT +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKSSSSC*SHLSLR
Trigger: ACGTAGGCTCAGGTGGCTGCAGCAGGAGGAGGAAGA...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAAACCACAGGCACCAGCTaGCACTGGGTGTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKTTGTS*HWVWLS
Trigger: GGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGT...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CAA 72 bp ATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGGTTTaGCTGGGGAAATATCTCGCTGCTTGCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: IGSKHLISSCLV*LGKYLAACKHW
Trigger: CCAGTGCTTGCAAGCAGCGAGATATTTCCCCAGCAAAACCAGGCAGCTGCTAATTAAATGCTTAGAACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACCCTCCACAATGGCATaGCAAGAAGGAGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKPSTMA*QEGGQQ
Trigger: CTGTTGCCCTCCTTCTTGGCATGCCATTGTGGAGGG...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CCA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAAGCTGCTTGCAAGCACTaGTCCCAAGGTGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: HGINSRLEGIYFINLPPKAACKH*SQGGLK
Trigger: CTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGC...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CCA 90 bp TCAAGACCCAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACAACTGGAGACAACAATaGAAATGGGCATTTCCATTG +
Preference number: 4 (lower is better)
Translates to: SRPRSFPMNKLPFTNREHNWRQQ*KWAFPL
Trigger: CAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTT...GTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGGGTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR GCA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGAACTTCTGCTCAATCTaGTTCTTCTTCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLNFCSI*FFFSSF
Trigger: GAAGGAGGAGAAGAAGAAGCAGATTGAGCAGAAGTT...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR GCA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTAATGGGCATTTCCATTaGTTGTGTTTCGATAAAACT +
Preference number: 4 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLNGHFH*LCFDKT
Trigger: AGTTTTATCGAAACACAAGCAATGGAAATGCCCATT...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR TCA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAACCAGGTCTTTCCCAATaGACAAACTCCCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKPGLSQ*TNSPLQ
Trigger: TTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTGG...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
3UTR CAA 72 bp ACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTaGTGTTTCGATAAAACTTTAAAGAACCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: TGDNNGNGHFHC*CFDKTLKNRLW
Trigger: CCACAGTCGGTTCTTTAAAGTTTTATCGAAACACAAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS GCA 90 bp TGCTCGCGCCGCTCCTGCTCGCGCCGCTCCTGCTCCCGCCGCTCCTaGTCCCGCTGCTCTGCCAGCCGCTTAGCCTCGGCCGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: CSRRSCSRRSCSRRS*SRCSASRLASAAFR
Trigger: GCGGAAGGCGGCCGAGGCTAAGCGGCTGGCAGAGCAGCGGGAGCAGGAGCGGCGGGAGCAGGAGCGGCGCGAGCAGGAGCGGCGCGAGCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 90 bp CGACGCTCCTGCTCTGCCAGCTGTCGCTCCTGCTCGCGCCGCTCCTaGTCCCGCCGCTCCTGCTCGCGCCGCTCCTGCTCGCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RRSCSASCRSCSRRS*SRRSCSRRSCSRRS
Trigger: GGAGCGGCGCGAGCAGGAGCGGCGCGAGCAGGAGCGGCGGGAGCAGGAGCGGCGCGAGCAGGAGCGACAGCTGGCAGAGCAGGAGCGTCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 90 bp GGGAAGACGGGGCGATCGGGCTGTGCCGCACCGATTGAGAGTCCGTaGGAGAGCCCGTGGGCGTGGAGAAGTTATCCGGCAGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: GKTGRSGCAAPIESP*ESPWAWRSYPAGWE
Trigger: CTCCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGCCCGATCGCCCCGTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS GCA 90 bp TCTCCTCCTTCATCTGCTCCACCCGCTCGCGGGCCTGCAGCACCTTaGGGAGGCGTTCCTCACGCTTCAGCTTCACCTCCTCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: SPPSSAPPARGPAAP*GGVPHASASPPPAA
Trigger: GGCGGCTGGAGGAGGTGAAGCTGAAGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGTGGAGCAGATGAAGGAGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 90 bp TGCTCTGCCAGCCGCTTAGCCTCGGCCGCCTTCCGCAGCCGCTCCTaGTCCTCTTCCTTCTTCTTCTGCAGCAGCTCTTGGTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: CSASRLASAAFRSRS*SSSFFFCSSSWCRR
Trigger: GCGGCGGCACCAAGAGCTGCTGCAGAAGAAGAAGGAAGAGGAGCAGGAGCGGCTGCGGAAGGCGGCCGAGGCTAAGCGGCTGGCAGAGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp CGATCGGGCTGTGCCGCACCGATTGAGAGTCCGTGCGAGAGCCCGTaGGCGTGGAGAAGTTATCCGGCAGGATGGGAGCCAGCACCCGCT +
Preference number: 5 (lower is better)
Translates to: RSGCAAPIESPCESP*AWRSYPAGWEPAPA
Trigger: AGCGGGTGCTGGCTCCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGCCCGATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp AGCCTCAGTGCTTCTTCAGGCTGTAGGCCAGGCTGCTGGGGACCCTaGCGCCCTGCAGGGGCGGTGAGTTCCAGACAGCAGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: SLSASSGCRPGCWGP*RPAGAVSSRQQSWC
Trigger: GCACCAGCTCTGCTGTCTGGAACTCACCGCCCCTGCAGGGCGCCAGGGTCCCCAGCAGCCTGGCCTACAGCCTGAAGAAGCACTGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp AGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCAGCTGTGCCGCACCGATaGAGAGTCCGTGCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSISEGGGLHLVILRHTAAVPHR*RVRARA
Trigger: GGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGC...TGCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACCGGGCCTGCAGCACCTaGCGGAGGCGTTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHRACST*RRRSSR
Trigger: GCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCG...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp CACCCGCTCCCGCCATGGAGAATCTGGAAAGGCTGGCGAGTCCCGTaGGCCAGGGGAGACCTGCGCAATCCTGAGCTTAGACGCAGACCG +
Preference number: 5 (lower is better)
Translates to: HPLPPWRIWKGWRVP*ARGDLRNPELRRRP
Trigger: CGGTCTGCGTCTAAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp GATGGGAGCCAGCACCCGCTCCCGCCATGGAGAATCTGGAAAGGCTaGCGAGTCCCGTGGGCCAGGGGAGACCTGCGCAATCCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: DGSQHPLPPWRIWKG*RVPWARGDLRNPEL
Trigger: AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTGCTGGCTCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS-3UTR CAA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCAGGGGCCGTACCACCTaGCTGGCTGGGCAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGRGRTT*LAGQGE
Trigger: CTCACCCTGCCCAGCCAGCAAGGTGGTACGGCCCCT...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 90 bp GGTCCGTCTTGGCCTCTTGCTGCCCTGCAGAGGGTGTTTCCGGGCTaGTGGCTGCAGGCTTCGGGTTGGGTGTGCTGTTGGCAATCTCCG +
Preference number: 5 (lower is better)
Translates to: GPSWPLAALQRVFPG*WLQASGWVCCWQSP
Trigger: CGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCTCTGCAGGGCAGCAAGAGGCCAAGACGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CCA 90 bp AGTCCGTGCGAGAGCCCGTGGGCGTGGAGAAGTTATCCGGCAGGATaGGAGCCAGCACCCGCTCCCGCCATGGAGAATCTGGAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPCESPWAWRSYPAG*EPAPAPAMENLERL
Trigger: CAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTGCTGGCTCCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTCGCACGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS-3UTR CAA 90 bp ACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGCTTCTGCAGCAGCTCTaGGTGCCGCCGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TTHCSSISEGGGLHLVILLLQQL*VPPLFL
Trigger: GAGGAAGAGCGGCGGCACCAAGAGCTGCTGCAGAAG...CAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACTTCTGCAGCAGCTCTaGGTGCCGCCGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEALLQQL*VPPLFL
Trigger: GAGGAAGAGCGGCGGCACCAAGAGCTGCTGCAGAAG...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp GGAGTCGGGGACAGAGTGCGGGGCAGAGGCTCGGTGGACATGAGCTaGGTGACATGCTGCTCAGCATTCTGGCGCTCACTGATGCCGATC +
Preference number: 5 (lower is better)
Translates to: GVGDRVRGRGSVDMS*VTCCSAFWRSLMPI
Trigger: GATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGAGCCTCTGCCCCGCACTCTGTCCCCGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp GCCCTGCAGAGGGTGTTTCCGGGCTGCTGGCTGCAGGCTTCGGGTTaGGTGTGCTGTTGGCAATCTCCGTGTCATTGTGGGGCCACGAGT +
Preference number: 5 (lower is better)
Translates to: ALQRVFPGCWLQASG*VCCWQSPCHCGATS
Trigger: ACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCTCTGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS-3UTR CAA 90 bp ATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCAGGCCACTGCTTGCCCAGACCCACTaGGCTCCGGGCCTTCGGGAC +
Preference number: 5 (lower is better)
Translates to: ILRHTAGDGTVPSSCRPLLAQTH*APGLRD
Trigger: GTCCCGAAGGCCCGGAGCCAAGTGGGTCTGGGCAAG...CAGTGGCCTGCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGTCACATTCAGGGCCTaGCTGGCCCCTGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHVTFRA*LAPAAS
Trigger: GGAGGCAGCAGGGGCCAGCAAGGCCCTGAATGTGAC...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp AGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGGGGAATGTCCAGCCGCCGCCGCTaGTCCTCCTCCACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RCSQVHLHLSSTGGAWGMSSRRR*SSSTFC
Trigger: GCAGAAGGTGGAGGAGGACAAGCGGCGGCGGCTGGA...CATTCCCCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS TCA 90 bp ATCCTCGGGCTTCTTAGTCAGCATCGTGGGAGACTCAGGGGTGGGTaGAGAAGGTGCAGCCAATGCCATGGTAGCCGCGGCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ILGLLSQHRGRLRGG*RRCSQCHGSRGSCS
Trigger: GCTGCAGCTGCCGCGGCTACCATGGCATTGGCTGCACCTTCTTCACCCACCCCTGAGTCTCCCACGATGCTGACTAAGAAGCCCGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS GCA 90 bp GACAGAGTGCGGGGCAGAGGCTCGGTGGACATGAGCTGGGTGACATaGTGCTCAGCATTCTGGCGCTCACTGATGCCGATCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: DRVRGRGSVDMSWVT*CSAFWRSLMPISTT
Trigger: TGTGGTGGAGATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGAGCCTCTGCCCCGCACTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS GCA 90 bp CTTGGCCTCTTGCTGCCCTGCAGAGGGTGTTTCCGGGCTGCTGGCTaGAGGCTTCGGGTTGGGTGTGCTGTTGGCAATCTCCGTGTCATT +
Preference number: 5 (lower is better)
Translates to: LGLLLPCRGCFRAAG*RLRVGCAVGNLRVI
Trigger: AATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCTCTGCAGGGCAGCAAGAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS GCA 90 bp AGACTGCACGTCCACAGTCACATTCAGGGCCTTGCTGGCCCCTGCTaGCTCCTTGGCTTTCTTCTCTTGCTCCTCCTGCAGCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: RLHVHSHIQGLAGPC*LLGFLLLLLLQLPL
Trigger: GAGCGGCAGCTGCAGGAGGAGCAAGAGAAGAAAGCCAAGGAGGCAGCAGGGGCCAGCAAGGCCCTGAATGTGACTGTGGACGTGCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp AGAGGCTCGGTGGACATGAGCTGGGTGACATGCTGCTCAGCATTCTaGCGCTCACTGATGCCGATCTCCACCACAGGCACCAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RGSVDMSWVTCCSAF*RSLMPISTTGTSWH
Trigger: GTGCCAGCTGGTGCCTGTGGTGGAGATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGAGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp CCAGGAATTGCTTCCAGCCCTGGTGCTCACCTTGGCTCCCTGTCCTaGTATGCCCTGCCTACCTCCGAAGCCCTGGAACTGAACTCACCC +
Preference number: 5 (lower is better)
Translates to: PGIASSPGAHLGSLS*YALPTSEALELNSP
Trigger: GGGTGAGTTCAGTTCCAGGGCTTCGGAGGTAGGCAGGGCATACCAGGACAGGGAGCCAAGGTGAGCACCAGGGCTGGAAGCAATTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528037.1
CDS-3UTR CAA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAACTTGCCCAGACCCACTaGGCTCCGGGCCTTCGGGAC +
Preference number: 5 (lower is better)
Translates to: YRAGTEAPSLHGINSRLELAQTH*APGLRD
Trigger: GTCCCGAAGGCCCGGAGCCAAGTGGGTCTGGGCAAG...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp ACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCCCCACCCACTCTTCGGCAGTCTTCTaGGCAAGCCTTCTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: TEHCLQAMWGWAHFFPTHSSAVF*ASLLLA
Trigger: GGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGA...GTGGGTGGGGAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACCGCCACGAGTTATTTCCATaGTTCTCAGGGACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: QQHLRGWGPAPGDPEAHRHELFP*FSGTSG
Trigger: GCCAGAGGTCCCTGAGAACAATGGAAATAACTCGTG...GCGGTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGAGCAGCTGCCTGGTTTaGCTGGGGAAATATCTCGCT +
Preference number: 5 (lower is better)
Translates to: GSGTTHCSSISEGGGLHLSSCLV*LGKYLA
Trigger: AGCGAGATATTTCCCCAGCAAAACCAGGCAGCTGCT...CAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS TCA 90 bp TTGCAGAGAAACTCCATGAGCTTCTGGTCACATAGCTCCAGCAGGTaGATGGGCCCTGGGGCCGTCGTCCCCATGGTGGCTCTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: LQRNSMSFWSHSSSR*MGPGAVVPMVALSH
Trigger: GTGCGACAGAGCCACCATGGGGACGACGGCCCCAGGGCCCATTCACCTGCTGGAGCTATGTGACCAGAAGCTCATGGAGTTTCTCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533896.5
CDS GCA 90 bp GGCCAGAGGCAGCTGGCTCTTCGGCAGTCTTCTTGGCAAGCCTTCTaGTCGCCCTGCGGACAACACTTTCCTGTTTGGCCACCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: GQRQLALRQSSWQAF*SPCGQHFPVWPPES
Trigger: ACTCTCTGGTGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGCCAGCTGCCTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp TGGCGCTCACTGATGCCGATCTCCACCACAGGCACCAGCTGGCACTaGGTGTGGTTATCCTCGGGCTTCTTAGTCAGCATCGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: WRSLMPISTTGTSWH*VWLSSGFLVSIVGD
Trigger: GTCTCCCACGATGCTGACTAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGTGGAGATCGGCATCAGTGAGCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp ACACTTTCCTGTTTGGCCACCAGAGAGTACTTCTGGGCTAAGACTTaGGGACTCGGGGAAGACGGGGCGATCGGGCTGTGCCGCACCGAT +
Preference number: 5 (lower is better)
Translates to: TLSCLATREYFWAKT*GLGEDGAIGLCRTD
Trigger: ATCGGTGCGGCACAGCCCGATCGCCCCGTCTTCCCCGAGTCCCCAAGTCTTAGCCCAGAAGTACTCTCTGGTGGCCAAACAGGAAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS-3UTR CAA 90 bp TACAGGGCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGCTGTGCCGCACCGATaGAGAGTCCGTGCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: YRAGTEAPSLHGINSRLEAVPHR*RVRARA
Trigger: GGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGC...TTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TGGTGGCCCAAGACACACAGCTACAGGGCTGGGACTGAGGCGCCCAGTCTTCATTCTGGGTCCATCTGCTaGGTCCGTCTTGGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: WWPKTHSYRAGTEAPSLHSGSIC*VRLGLL
Trigger: CAAGAGGCCAAGACGGACCAAGCAGATGGACCCAGA...ATGAAGACTGGGCGCCTCAGTCCCAGCCCTGTAGCTGTGTGTCTTGGGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCTGCTCTCAAGTCCATTaGCACCTGAGCAGCACGGGT +
Preference number: 5 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGCSQVH*HLSSTG
Trigger: ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCA...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGTCGACGAAGCTGCACTaGGGGTCCATGCGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRSTKLH*GSMRRG
Trigger: TCCCCTGCGCATGGACCCCAAGTGCAGCTTCGTCGA...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS TCA 90 bp TTGCAGAGAAACTCCATGAGCTTCTGGTCACATAGCTCCAGCAGGTaGATGGGCCCTGGGGCCGTCGTCCCCATGGTGGCTCTGTTCGAC +
Preference number: 5 (lower is better)
Translates to: LQRNSMSFWSHSSSR*MGPGAVVPMVALFD
Trigger: GTCGAACAGAGCCACCATGGGGACGACGGCCCCAGGGCCCATTCACCTGCTGGAGCTATGTGACCAGAAGCTCATGGAGTTTCTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS TCA 90 bp GCTCCCTGTCCTGGTATGCCCTGCCTACCTCCGAAGCCCTGGAACTaGACTCACCCAACTTTCTGGGGCACCTCAACATTCAGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: APCPGMPCLPPKPWN*THPTFWGTSTFRSL
Trigger: GAGGCTCCTGAATGTTGAGGTGCCCCAGAAAGTTGGGTGAGTTCAGTTCCAGGGCTTCGGAGGTAGGCAGGGCATACCAGGACAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528037.1
CDS CCA 90 bp AGCTTCTCTACACTGTCCTTGCTGCGGAGGCGTCGGGAGCTCAGCTaGCTGCTCCGAGACTTTCTGCGGGATAACCTTCTCCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: SFSTLSLLRRRRELS*LLRDFLRDNLLLMG
Trigger: TCCCATCAGGAGAAGGTTATCCCGCAGAAAGTCTCGGAGCAGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS CCA 90 bp TCACTGATGCCGATCTCCACCACAGGCACCAGCTGGCACTGGGTGTaGTTATCCTCGGGCTTCTTAGTCAGCATCGTGGGAGACTCAGGG +
Preference number: 5 (lower is better)
Translates to: SLMPISTTGTSWHWV*LSSGFLVSIVGDSG
Trigger: CCCTGAGTCTCCCACGATGCTGACTAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGTGGAGATCGGCATCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp GCATTCTGGCGCTCACTGATGCCGATCTCCACCACAGGCACCAGCTaGCACTGGGTGTGGTTATCCTCGGGCTTCTTAGTCAGCATCGTG +
Preference number: 5 (lower is better)
Translates to: AFWRSLMPISTTGTS*HWVWLSSGFLVSIV
Trigger: CACGATGCTGACTAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGTGGAGATCGGCATCAGTGAGCGCCAGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp GCTGTCAGCTACGCAGGGAAGGGGCTACAGCGGGTGAGTGCTAGGTaGGGCGAGGTTACCGACAGGAAAAGGCTTTACTTACGACGAAGC +
Preference number: 5 (lower is better)
Translates to: AVSYAGKGLQRVSAR*GEVTDRKRLYLRRS
Trigger: GCTTCGTCGTAAGTAAAGCCTTTTCCTGTCGGTAACCTCGCCCCACCTAGCACTCACCCGCTGTAGCCCCTTCCCTGCGTAGCTGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528375.1
CDS-3UTR CAA 90 bp TCCTCAAGGGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGTTCTCTACACTGTCCTaGCTGCGGAGGCGTCGGGAG +
Preference number: 5 (lower is better)
Translates to: SSRVIQAVEPLTAAASPRFSTLS*LRRRRE
Trigger: CTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGAA...CCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACCCTTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCACACACAACACTTTCCTGTTaGGCCACCAGAGAGTACTTC +
Preference number: 5 (lower is better)
Translates to: LQQHLRGWGPAPGDPEAHTTLSC*ATREYF
Trigger: GAAGTACTCTCTGGTGGCCAAACAGGAAAGTGTTGT...GTGTGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCAGCAATCTCCGTGTCATaGTGGGGCCACGAGTTATTT +
Preference number: 5 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEAAISVS*WGHELF
Trigger: AAATAACTCGTGGCCCCACAATGACACGGAGATTGC...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GCAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCGTCCGTCTTGGCCTCTaGCTGCCCTGCAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: AAETPSTEDVYIHLAKPSVRLGL*LPCRGC
Trigger: ACACCCTCTGCAGGGCAGCAAGAGGCCAAGACGGAC...GGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCAATGCGCAGGGGAGTGTaGCGCTTAATAAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEAMRRGV*RLIKDF
Trigger: GAAGTCCTTTATTAAGCGCAACACTCCCCTGCGCAT...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TGCCCCATCGTGACAGTAACTGACGTGTTCCTCAAGGGTTATCCAGGCAGTGGATGCCGCTCCTTCTCCTaGGGGTCCATGCGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CPIVTVTDVFLKGYPGSGCRSFS*GSMRRG
Trigger: TCCCCTGCGCATGGACCCCAAGGAGAAGGAGCGGCA...TCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278849.4
CDS-3UTR CAA 90 bp CAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTTCGTCACATTCAGGGCCTaGCTGGCCCCTGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: QLFTEHCLQAMWGWAHFFVTFRA*LAPAAS
Trigger: GGAGGCAGCAGGGGCCAGCAAGGCCCTGAATGTGAC...GAAGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 90 bp CAGCTGGCTCTTCGGCAGTCTTCTTGGCAAGCCTTCTGCTCGCCCTaGGGACAACACTTTCCTGTTTGGCCACCAGAGAGTACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: QLALRQSSWQAFCSP*GQHFPVWPPESTSG
Trigger: CCCAGAAGTACTCTCTGGTGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 90 bp TCTTGGCAAGCCTTCTGCTCGCCCTGCGGACAACACTTTCCTGTTTaGCCACCAGAGAGTACTTCTGGGCTAAGACTTGGGGACTCGGGG +
Preference number: 5 (lower is better)
Translates to: SWQAFCSPCGQHFPV*PPESTSGLRLGDSG
Trigger: CCCCGAGTCCCCAAGTCTTAGCCCAGAAGTACTCTCTGGTGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS-3UTR CAA 90 bp TCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTGGTGATCCTGAGGCAACAACACTTTCCTGTTaGGCCACCAGAGAGTACTTC +
Preference number: 5 (lower is better)
Translates to: SLQQHLRGWGPAPGDPEATTLSC*ATREYF
Trigger: GAAGTACTCTCTGGTGGCCAAACAGGAAAGTGTTGT...TGCCTCAGGATCACCAGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GGAAATATCTCGCTGCTTGCAAGCACTGGTCCCAAGGTGGTCTCAAGGGATACCGTCCGTCTTGGCCTCTaGCTGCCCTGCAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: GNISLLASTGPKVVSRDTVRLGL*LPCRGC
Trigger: ACACCCTCTGCAGGGCAGCAAGAGGCCAAGACGGAC...GGTATCCCTTGAGACCACCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CAA 90 bp GGTTATCCAGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCATGCGCAGGGGAGTGTaGCGCTTAATAAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: GYPGSGTTHCSSISEGGGMRRGV*RLIKDF
Trigger: GAAGTCCTTTATTAAGCGCAACACTCCCCTGCGCAT...GCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCTGGATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CACCTGGTGATCCTGAGGCACACCGCAGGTGATGGAACAGTACCTTCGTCCTGCACCTCCTCCATCTTCTaGGCCGCCGCCTTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: HLVILRHTAGDGTVPSSCTSSIF*AAAFFL
Trigger: CAAGAAAAAGGCGGCGGCCAAGAAGATGGAGGAGGT...GCAGGACGAAGGTACTGTTCCATCACCTGCGGTGTGCCTCAGGATCACCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp GTGTTTCCGGGCTGCTGGCTGCAGGCTTCGGGTTGGGTGTGCTGTTaGCAATCTCCGTGTCATTGTGGGGCCACGAGTTATTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: VFPGCWLQASGWVCC*QSPCHCGATSYFHC
Trigger: ACAATGGAAATAACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CCA 90 bp CAAGTCCAGTGGGAGAATGGTTCCAAAGAGCTCCAGAAGGTTCGGTaGGTGGTAGTACTGGTGAATGATAGCCTGGCTGAGCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: QVQWENGSKELQKVR*VVVLVNDSLAERGA
Trigger: GGCACCCCGCTCAGCCAGGCTATCATTCACCAGTACTACCACCCACCGAACCTTCTGGAGCTCTTTGGAACCATTCTCCCACTGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CAGCAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCATTCTCTACACTGTCCTaGCTGCGGAGGCGTCGGGAG +
Preference number: 5 (lower is better)
Translates to: QQKHPAQRTFIYTWPSPPFSTLS*LRRRRE
Trigger: CTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGAA...TGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CCCGGGGCTACAGTAGCAGATATATGCATTCAGAAGGCAGCAGTAGGCAGCTCATCTGCTTGGTCCGTCTaGGCCTCTTGCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: PGATVADICIQKAAVGSSSAWSV*ASCCPA
Trigger: TGCAGGGCAGCAAGAGGCCAAGACGGACCAAGCAGA...TGAGCTGCCTACTGCTGCCTTCTGAATGCATATATCTGCTACTGTAGCCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS TCA 90 bp TCTGGGTTGATCTTGGGAGGGGCCCTGTGCCCTTGCGGAGTCATCTaGTATGAGGTACAAGCTGGAGACTGCACGTCCACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: SGLILGGALCPCGVI*YEVQAGDCTSTVTF
Trigger: GAATGTGACTGTGGACGTGCAGTCTCCAGCTTGTACCTCATATCAGATGACTCCGCAAGGGCACAGGGCCCCTCCCAAGATCAACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS TCA 90 bp CGGTGGAGTCGTCGCTATTCAGATCCATCCCGTAGTTATCTGGGTTaGTCTTGGGAGGGGCCCTGTGCCCTTGCGGAGTCATCTGATATG +
Preference number: 5 (lower is better)
Translates to: RWSRRYSDPSRSYLG*SWEGPCALAESSDM
Trigger: CATATCAGATGACTCCGCAAGGGCACAGGGCCCCTCCCAAGATCAACCCAGATAACTACGGGATGGATCTGAATAGCGACGACTCCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp GCAGGCTTCGGGTTGGGTGTGCTGTTGGCAATCTCCGTGTCATTGTaGGGCCACGAGTTATTTCCATTGTTCTCAGGGACCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AGFGLGVLLAISVSL*GHELFPLFSGTSGS
Trigger: TGAGCCAGAGGTCCCTGAGAACAATGGAAATAACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CCA 90 bp ATCATCGGTGGAGTCGTCGCTATTCAGATCCATCCCGTAGTTATCTaGGTTGATCTTGGGAGGGGCCCTGTGCCCTTGCGGAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: IIGGVVAIQIHPVVI*VDLGRGPVPLRSHL
Trigger: CAGATGACTCCGCAAGGGCACAGGGCCCCTCCCAAGATCAACCCAGATAACTACGGGATGGATCTGAATAGCGACGACTCCACCGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp AGGCAGTGGAACCACTCACTGCAGCAGCATCTCCGAGGGTGGGGGCCTGCACCTTCCTTATTATCCATGTaGCAGAGAAACTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: RQWNHSLQQHLRGWGPAPSLLSM*QRNSMS
Trigger: GCTCATGGAGTTTCTCTGCAACATGGATAATAAGGA...AGGTGCAGGCCCCCACCCTCGGAGATGCTGCTGCAGTGAGTGGTTCCACTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTGCGCTCGGCCTCCTCTaGGATTTCCTCAAGCCACAC +
Preference number: 5 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISALGLL*DFLKPH
Trigger: GTGTGGCTTGAGGAAATCCAAGAGGAGGCCGAGCGC...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CAGAAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATCTGCTTGGTCCGTCTaGGCCTCTTGCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: QKHPAQRTFIYTWPSPPQSAWSV*ASCCPA
Trigger: TGCAGGGCAGCAAGAGGCCAAGACGGACCAAGCAGA...TTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTTCTGGGTCCATCTGCTaGGTCCGTCTTGGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGSGSIC*VRLGLL
Trigger: CAAGAGGCCAAGACGGACCAAGCAGATGGACCCAGA...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCGGGCCTGCAGCACCTaGCGGAGGCGTTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLRACST*RRRSSR
Trigger: GCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCG...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CCCTCGGAGCAGAGCAACTGGAGACAACAATGGAAATGGGCATTTCCATTGCTTGCCGCCGCCTTTTTCTaGGCCTTCTCCTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSEQSNWRQQWKWAFPLLAAAFF*AFSSAS
Trigger: GCTGGCAGAGGAGAAGGCCAAGAAAAAGGCGGCGGC...AAGCAATGGAAATGCCCATTTCCATTGTTGTCTCCAGTTGCTCTGCTCCGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CAA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTTCCAGCCGCCGCCGCTaGTCCTCCTCCACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: EAPSLHGINSRLEGIYFISSRRR*SSSTFC
Trigger: GCAGAAGGTGGAGGAGGACAAGCGGCGGCGGCTGGA...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTACCTCCTCCATCTTCTaGGCCGCCGCCTTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ASPAHRCSQVHLHLSSTGTSSIF*AAAFFL
Trigger: CAAGAAAAAGGCGGCGGCCAAGAAGATGGAGGAGGT...ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp AAACACCCAGCACAGAGGACGTTTATATACACCTGGCCAAGCCCTCCACAATGGCCCACAGGCCATAGTTaGACAACCCGGGGCTACAGT +
Preference number: 5 (lower is better)
Translates to: KHPAQRTFIYTWPSPPQWPTGHS*TTRGYS
Trigger: ACTGTAGCCCCGGGTTGTCAAACTATGGCCTGTGGG...CCATTGTGGAGGGCTTGGCCAGGTGTATATAAACGTCCTCTGTGCTGGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS GCA 90 bp GATACCCCTTTTCTACTCAGACCTCATGCTTCACCAGCACATAGATaGTCTCAAGTCCATTTGCACCTGAGCAGCACGGGTGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: DTPFLLRPHASPAHR*SQVHLHLSSTGGAC
Trigger: GCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAAAGGGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531099.1
CDS-3UTR CAA 90 bp GCTGGGACTGAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATAGAAATATCTCGCTGCTaGCAAGCACTGGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: AGTEAPSLHGINSRLEGIEISRC*QALVPR
Trigger: CCTTGGGACCAGTGCTTGCAAGCAGCGAGATATTTC...TATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTCAGTCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS TCA 90 bp AGACAGCAGAGCTGGTGCGCTTGTGATAGCGGGGCTTGCTCTTCTTaGAGATATCCTCCAAGTCCAGTGGGAGAATGGTTCCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RQQSWCACDSGACSS*RYPPSPVGEWFQRA
Trigger: AGCTCTTTGGAACCATTCTCCCACTGGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCCGCTATCACAAGCGCACCAGCTCTGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 90 bp GTGATAGCGGGGCTTGCTCTTCTTGAAGATATCCTCCAAGTCCAGTaGGAGAATGGTTCCAAAGAGCTCCAGAAGGTTCGGTGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VIAGLALLEDILQVQ*ENGSKELQKVRWVV
Trigger: TACCACCCACCGAACCTTCTGGAGCTCTTTGGAACCATTCTCCCACTGGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCCGCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TCCCAAGGTGGTCTCAAGGGATACCCCTTTTCTACTCAGACCTCATGCTTCACCCGGGGCTTGCTCTTCTaGAAGATATCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SQGGLKGYPFSTQTSCFTRGLLF*KISSKS
Trigger: GGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCCG...GGTGAAGCATGAGGTCTGAGTAGAAAAGGGGTATCCCTTGAGACCACCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CAA 90 bp AACAACTATTTACAGAGCACTGTCTGCAGGCCATGTGGGGCTGGGCCCATTTCTCACGAGTTATTTCCATaGTTCTCAGGGACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: NNYLQSTVCRPCGAGPISHELFP*FSGTSG
Trigger: GCCAGAGGTCCCTGAGAACAATGGAAATAACTCGTG...AGAAATGGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CAGGTCTTTCCCAATGAACAAACTCCCCTTTACAAACAGGGAGCACCCCAAAAATTATCTGGGTTGATCTaGGGAGGGGCCCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: QVFPNEQTPLYKQGAPQKLSGLI*GGALCP
Trigger: AGGGCACAGGGCCCCTCCCAAGATCAACCCAGATAA...TTTTTGGGGTGCTCCCTGTTTGTAAAGGGGAGTTTGTTCATTGGGAAAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GCAGGACCACAGCCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGTGCTCTCAAGTCCATTaGCACCTGAGCAGCACGGGT +
Preference number: 5 (lower is better)
Translates to: AGPQPAFIGSKHLISSCLCSQVH*HLSSTG
Trigger: ACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCA...CAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGGCTGTGGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CAA 90 bp TTTCTACTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTTGTCTTCGGCAGTCTTCTaGGCAAGCCTTCTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: FLLRPHASPAHRCSQVHLSSAVF*ASLLLA
Trigger: GGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGA...CAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAGTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAAAGGGGCCGTACCACCTaGCTGGCTGGGCAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: HGINSRLEGIYFINLPPKRGRTT*LAGQGE
Trigger: CTCACCCTGCCCAGCCAGCAAGGTGGTACGGCCCCT...TTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp CCCGGGGCTACAGTAGCAGATATATGCATTCAGAAGGCAGCAGTAGGCAGCTCATCCTTATTATCCATGTaGCAGAGAAACTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: PGATVADICIQKAAVGSSSLLSM*QRNSMS
Trigger: GCTCATGGAGTTTCTCTGCAACATGGATAATAAGGA...TGAGCTGCCTACTGCTGCCTTCTGAATGCATATATCTGCTACTGTAGCCCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CAA 90 bp GCAGGACCACAGCCAGCTTTCATTGGTTCTAAGCATTTAATTAGCAGCTGCCTGGCAATCTCCGTGTCATaGTGGGGCCACGAGTTATTT +
Preference number: 5 (lower is better)
Translates to: AGPQPAFIGSKHLISSCLAISVS*WGHELF
Trigger: AAATAACTCGTGGCCCCACAATGACACGGAGATTGC...CAGGCAGCTGCTAATTAAATGCTTAGAACCAATGAAAGCTGGCTGTGGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS-3UTR CAA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAAGCCGCCGCCTTTTTCTaGGCCTTCTCCTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKAAAFF*AFSSAS
Trigger: GCTGGCAGAGGAGAAGGCCAAGAAAAAGGCGGCGGC...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp GAGGCGCCCAGTCTTCATGGTATCAACAGCAGGCTTGAAGGAATATACTTTATTCGGGGCTTGCTCTTCTaGAAGATATCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: EAPSLHGINSRLEGIYFIRGLLF*KISSKS
Trigger: GGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCCG...AATAAAGTATATTCCTTCAAGCCTGCTGTTGATACCATGAAGACTGGGCGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp TCAACAGCAGGCTTGAAGGAATATACTTTATTAATCTACCTCCCAAACGCTAAATTATCTGGGTTGATCTaGGGAGGGGCCCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: STAGLKEYTLLIYLPNAKLSGLI*GGALCP
Trigger: AGGGCACAGGGCCCCTCCCAAGATCAACCCAGATAA...TTTAGCGTTTGGGAGGTAGATTAATAAAGTATATTCCTTCAAGCCTGCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS-3UTR CAA 90 bp AAAGTTCAAATAGTAAACATATTCAGCTTTGCATGGAGGGGCCTCTGCTGCACAGGGCATTTCCATTGCTaGTGTTTCGATAAAACTTTA +
Preference number: 5 (lower is better)
Translates to: KVQIVNIFSFAWRGLCCTGHFHC*CFDKTL
Trigger: TAAAGTTTTATCGAAACACAAGCAATGGAAATGCCC...TGTGCAGCAGAGGCCCCTCCATGCAAAGCTGAATATGTTTACTATTTGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS CCA 72 bp CCAGCAGGTGAATGGGCCCTGGGGCCGTCGTCCCCATaGTGGCTCTGTCGCACGGGAGGAGCAACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: PAGEWALGPSSP*WLCRTGGATRR
Trigger: CCGCCTGGTTGCTCCTCCCGTGCGACAGAGCCACCATGGGGACGACGGCCCCAGGGCCCATTCACCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533896.5
CDS TCA 72 bp GGGGAAGACGGGGCGATCGGGCTGTGCCGCACCGATTaGGAGTCCGTGCGAGAGCCCGTGGGCGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: GEDGAIGLCRTD*ESVREPVGVEK
Trigger: CTTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGCCCGATCGCCCCGTCTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 72 bp CGGGGAAGACGGGGCGATCGGGCTGTGCCGCACCGATaGAGAGTCCGTGCGAGAGCCCGTGGGCGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: RGRRGDRAVPHR*RVRARARGRGE
Trigger: TTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGCCCGATCGCCCCGTCTTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS GCA 72 bp AGAAGGTGCAGCCAATGCCATGGTAGCCGCGGCAGCTaGAGCCGCAGCACGGGTCACACGCCGCAGGACGGA +
Preference number: 6 (lower is better)
Translates to: RRCSQCHGSRGS*SRSTGHTPQDG
Trigger: TCCGTCCTGCGGCGTGTGACCCGTGCTGCGGCTGCAGCTGCCGCGGCTACCATGGCATTGGCTGCACCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS GCA 72 bp GGAAAGGCTGGCGAGTCCCGTGGGCCAGGGGAGACCTaGGCAATCCTGAGCTTAGACGCAGACCGCCCCGTC +
Preference number: 6 (lower is better)
Translates to: GKAGESRGPGET*AILSLDADRPV
Trigger: GACGGGGCGGTCTGCGTCTAAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp GATGGGAGCCAGCACCCGCTCCCGCCATGGAGAATCTaGAAAGGCTGGCGAGTCCCGTGGGCCAGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: DGSQHPLPPWRI*KGWRVPWARGD
Trigger: GTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTGCTGGCTCCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp AGCCTCAGTGCTTCTTCAGGCTGTAGGCCAGGCTGCTaGGGACCCTGGCGCCCTGCAGGGGCGGTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: SLSASSGCRPGC*GPWRPAGAVSS
Trigger: GGAACTCACCGCCCCTGCAGGGCGCCAGGGTCCCCAGCAGCCTGGCCTACAGCCTGAAGAAGCACTGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CAA 72 bp GTATCCCTAGGTAAGGCCCCGCTTGCCCAGACCCACTaGGCTCCGGGCCTTCGGGACTCACCGCACGGGAGG +
Preference number: 6 (lower is better)
Translates to: VSLGKAPLAQTH*APGLRDSPHGR
Trigger: CCTCCCGTGCGGTGAGTCCCGAAGGCCCGGAGCCAAGTGGGTCTGGGCAAGCGGGGCCTTACCTAGGGATAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 90 bp AGTCCGGTGGTATCCCTAGGTAAGGCCCCGCTTGCCCAGACCCACTaGGCTCCGGGCCTTCGGGACTCACCGCACGGGAGGAGCAACCAG +
Preference number: 6 (lower is better)
Translates to: SPVVSLGKAPLAQTH*APGLRDSPHGRSNQ
Trigger: CTGGTTGCTCCTCCCGTGCGGTGAGTCCCGAAGGCCCGGAGCCAAGTGGGTCTGGGCAAGCGGGGCCTTACCTAGGGATACCACCGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS GCA 72 bp GGGCGATCGGGCTGTGCCGCACCGATTGAGAGTCCGTaGGAGAGCCCGTGGGCGTGGAGAAGTTATCCGGCA +
Preference number: 6 (lower is better)
Translates to: GRSGCAAPIESP*ESPWAWRSYPA
Trigger: TGCCGGATAACTTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCGGCACAGCCCGATCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS GCA 72 bp TCGGCCTCCTCCTTCCGCCGCAGATTCTCCAGGCGCTaGCGCTCCTTCTCGACGAAGCTGCACTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: SASSFRRRFSRR*RSFSTKLHLGS
Trigger: GGACCCCAAGTGCAGCTTCGTCGAGAAGGAGCGGCAGCGCCTGGAGAATCTGCGGCGGAAGGAGGAGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS CCA 72 bp CAGCACCCGCTCCCGCCATGGAGAATCTGGAAAGGCTaGCGAGTCCCGTGGGCCAGGGGAGACCTGCGCAAT +
Preference number: 6 (lower is better)
Translates to: QHPLPPWRIWKG*RVPWARGDLRN
Trigger: ATTGCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCTCCATGGCGGGAGCGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 90 bp TTCTCCTCCTTCATCTGCTCCACCCGCTCGCGGGCCTGCAGCACCTaGCGGAGGCGTTCCTCACGCTTCAGCTTCACCTCCTCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: FSSFICSTRSRACST*RRRSSRFSFTSSSR
Trigger: GCGGCTGGAGGAGGTGAAGCTGAAGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGTGGAGCAGATGAAGGAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 72 bp TGGCCTCTTGCTGCCCTGCAGAGGGTGTTTCCGGGCTaGTGGCTGCAGGCTTCGGGTTGGGTGTGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: WPLAALQRVFPG*WLQASGWVCCW
Trigger: CCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCTCTGCAGGGCAGCAAGAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS GCA 72 bp TCATCTGCTCCACCCGCTCGCGGGCCTGCAGCACCTTaGGGAGGCGTTCCTCACGCTTCAGCTTCACCTCCT +
Preference number: 6 (lower is better)
Translates to: SSAPPARGPAAP*GGVPHASASPP
Trigger: AGGAGGTGAAGCTGAAGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGTGGAGCAGATGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS GCA 72 bp TTCTCCTCCTTCATCTGCTCCACCCGCTCGCGGGCCTaGAGCACCTTGCGGAGGCGTTCCTCACGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: FSSFICSTRSRA*STLRRRSSRFS
Trigger: GCTGAAGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGTGGAGCAGATGAAGGAGGAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 72 bp GAGAGCCCGTGGGCGTGGAGAAGTTATCCGGCAGGATaGGAGCCAGCACCCGCTCCCGCCATGGAGAATCTG +
Preference number: 6 (lower is better)
Translates to: ESPWAWRSYPAG*EPAPAPAMENL
Trigger: CAGATTCTCCATGGCGGGAGCGGGTGCTGGCTCCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp GCACCGATTGAGAGTCCGTGCGAGAGCCCGTGGGCGTaGAGAAGTTATCCGGCAGGATGGGAGCCAGCACCC +
Preference number: 6 (lower is better)
Translates to: APIESPCESPWA*RSYPAGWEPAP
Trigger: GGGTGCTGGCTCCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp GTGCCTCGGGCCCAGGTGGGGATGGGCTTCCGGGGATaGGCCTCATCATCGGTGGAGTCGTCGCTATTCAGA +
Preference number: 6 (lower is better)
Translates to: VPRAQVGMGFRG*ASSSVESSLFR
Trigger: TCTGAATAGCGACGACTCCACCGATGATGAGGCCCATCCCCGGAAGCCCATCCCCACCTGGGCCCGAGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CAA 72 bp TTCATCTGCTCCACCCGCTCGCGGGCCTGCAGCACCTaGCGGAGGCGTTCCTCACGCTTCAGCTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: FICSTRSRACST*RRRSSRFSFTS
Trigger: GGAGGTGAAGCTGAAGCGTGAGGAACGCCTCCGCAAGGTGCTGCAGGCCCGCGAGCGGGTGGAGCAGATGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS TCA 72 bp CCCCATGGTGGCTCTGTTCGACTGCGCCACGTCCCCTaGAGGCTGCTCCGATCCAAGTCCGGTGGTATCCCT +
Preference number: 6 (lower is better)
Translates to: PHGGSVRLRHVP*RLLRSKSGGIP
Trigger: AGGGATACCACCGGACTTGGATCGGAGCAGCCTTCAGGGGACGTGGCGCAGTCGAACAGAGCCACCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp TGTGCCGCACCGATTGAGAGTCCGTGCGAGAGCCCGTaGGCGTGGAGAAGTTATCCGGCAGGATGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: CAAPIESPCESP*AWRSYPAGWEP
Trigger: TGGCTCCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCGGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 72 bp TCCCCGACCACTGTAGCCAGCTTCTCTACACTGTCCTaGCTGCGGAGGCGTCGGGAGCTCAGCTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SPTTVASFSTLS*LRRRRELSWLL
Trigger: GAGCAGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGAAGCTGGCTACAGTGGTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS CAA 90 bp TGCCCTGCAGAGGGTGTTTCCGGGCTGCTGGCTGCAGGCTTCGGGTaGGGTGTGCTGTTGGCAATCTCCGTGTCATTGTGGGGCCACGAG +
Preference number: 6 (lower is better)
Translates to: CPAEGVSGLLAAGFG*GVLLAISVSLWGHE
Trigger: CTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCTCTGCAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CAA 90 bp GAGCCGTTCTCCCCGACCACTGTAGCCAGCTTCTCTACACTGTCCTaGCTGCGGAGGCGTCGGGAGCTCAGCTGGCTGCTCCGAGACTTT +
Preference number: 6 (lower is better)
Translates to: EPFSPTTVASFSTLS*LRRRRELSWLLRDF
Trigger: AAAGTCTCGGAGCAGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGAAGCTGGCTACAGTGGTCGGGGAGAACGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS GCA 72 bp CGGGGCAGAGGCTCGGTGGACATGAGCTGGGTGACATaGTGCTCAGCATTCTGGCGCTCACTGATGCCGATC +
Preference number: 6 (lower is better)
Translates to: RGRGSVDMSWVT*CSAFWRSLMPI
Trigger: GATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGAGCCTCTGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS GCA 72 bp TTGCTGCCCTGCAGAGGGTGTTTCCGGGCTGCTGGCTaGAGGCTTCGGGTTGGGTGTGCTGTTGGCAATCTC +
Preference number: 6 (lower is better)
Translates to: LLPCRGCFRAAG*RLRVGCAVGNL
Trigger: GAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCTCTGCAGGGCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CCA 72 bp GACAGAGTGCGGGGCAGAGGCTCGGTGGACATGAGCTaGGTGACATGCTGCTCAGCATTCTGGCGCTCACTG +
Preference number: 6 (lower is better)
Translates to: DRVRGRGSVDMS*VTCCSAFWRSL
Trigger: CAGTGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCATGTCCACCGAGCCTCTGCCCCGCACTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp CCGCCATGGAGAATCTGGAAAGGCTGGCGAGTCCCGTaGGCCAGGGGAGACCTGCGCAATCCTGAGCTTAGA +
Preference number: 6 (lower is better)
Translates to: PPWRIWKGWRVP*ARGDLRNPELR
Trigger: TCTAAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTCCAGATTCTCCATGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp AGCTGCGCTTCCTCCTGGCACTCTGCGGTGGCTCTCTaGGTCCATCTGCTTGGTCCGTCTTGGCCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: SCASSWHSAVAL*VHLLGPSWPLA
Trigger: AGCAAGAGGCCAAGACGGACCAAGCAGATGGACCCAGAGAGCCACCGCAGAGTGCCAGGAGGAAGCGCAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CCA 72 bp ACGCTGCGTGGGGCTGAGGTCGGGGTCATGAGCATCTaGTTCCTCTGCACTGTGTGCAGAAAGGTCCGGAGG +
Preference number: 6 (lower is better)
Translates to: TLRGAEVGVMSI*FLCTVCRKVRR
Trigger: CCTCCGGACCTTTCTGCACACAGTGCAGAGGAACCAGATGCTCATGACCCCGACCTCAGCCCCACGCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CAA 90 bp ACGTCCACAGTCACATTCAGGGCCTTGCTGGCCCCTGCTGCCTCCTaGGCTTTCTTCTCTTGCTCCTCCTGCAGCTGCCGCTCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: TSTVTFRALLAPAAS*AFFSCSSCSCRSAR
Trigger: TCTGGCTGAGCGGCAGCTGCAGGAGGAGCAAGAGAAGAAAGCCAAGGAGGCAGCAGGGGCCAGCAAGGCCCTGAATGTGACTGTGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS TCA 72 bp GTGCTGTCAGCTACGCAGGGAAGGGGCTACAGCGGGTaGGTGCTAGGTGGGGCGAGGTTACCGACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: VLSATQGRGYSG*VLGGARLPTGK
Trigger: TTTTCCTGTCGGTAACCTCGCCCCACCTAGCACTCACCCGCTGTAGCCCCTTCCCTGCGTAGCTGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528375.1
CDS GCA 72 bp GTGGCTCTGTTCGACTGCGCCACGTCCCCTGAAGGCTaGTCCGATCCAAGTCCGGTGGTATCCCTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: VALFDCATSPEG*SDPSPVVSLGK
Trigger: CTTACCTAGGGATACCACCGGACTTGGATCGGAGCAGCCTTCAGGGGACGTGGCGCAGTCGAACAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp ACACTGTCCTTGCTGCGGAGGCGTCGGGAGCTCAGCTaGCTGCTCCGAGACTTTCTGCGGGATAACCTTCTC +
Preference number: 6 (lower is better)
Translates to: TLSLLRRRRELS*LLRDFLRDNLL
Trigger: GAGAAGGTTATCCCGCAGAAAGTCTCGGAGCAGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS CCA 72 bp TGTTTGGCCACCAGAGAGTACTTCTGGGCTAAGACTTaGGGACTCGGGGAAGACGGGGCGATCGGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: CLATREYFWAKT*GLGEDGAIGLC
Trigger: GCACAGCCCGATCGCCCCGTCTTCCCCGAGTCCCCAAGTCTTAGCCCAGAAGTACTCTCTGGTGGCCAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp TGCGGCCAGAGGCAGCTGGCTCTTCGGCAGTCTTCTTaGCAAGCCTTCTGCTCGCCCTGCGGACAACACTTT +
Preference number: 6 (lower is better)
Translates to: CGQRQLALRQSS*QAFCSPCGQHF
Trigger: AAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGCCAGCTGCCTCTGGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp AGGGTGTTTCCGGGCTGCTGGCTGCAGGCTTCGGGTTaGGTGTGCTGTTGGCAATCTCCGTGTCATTGTGGG +
Preference number: 6 (lower is better)
Translates to: RVFPGCWLQASG*VCCWQSPCHCG
Trigger: CCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CAA 72 bp ATGCGGCCAGAGGCAGCTGGCTCTTCGGCAGTCTTCTaGGCAAGCCTTCTGCTCGCCCTGCGGACAACACTT +
Preference number: 6 (lower is better)
Translates to: MRPEAAGSSAVF*ASLLLALRTTL
Trigger: AAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGCCAGCTGCCTCTGGCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 72 bp TCCAGGCGCTGCCGCTCCTTCTCGACGAAGCTGCACTaGGGGTCCATGCGCAGGGGAGTGTTGCGCTTAATA +
Preference number: 6 (lower is better)
Translates to: SRRCRSFSTKLH*GSMRRGVLRLI
Trigger: TATTAAGCGCAACACTCCCCTGCGCATGGACCCCAAGTGCAGCTTCGTCGAGAAGGAGCGGCAGCGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394818.8
CDS CCA 72 bp CCGATCTCCACCACAGGCACCAGCTGGCACTGGGTGTaGTTATCCTCGGGCTTCTTAGTCAGCATCGTGGGA +
Preference number: 6 (lower is better)
Translates to: PISTTGTSWHWV*LSSGFLVSIVG
Trigger: TCCCACGATGCTGACTAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGTGGAGATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp CGCTCACTGATGCCGATCTCCACCACAGGCACCAGCTaGCACTGGGTGTGGTTATCCTCGGGCTTCTTAGTC +
Preference number: 6 (lower is better)
Translates to: RSLMPISTTGTS*HWVWLSSGFLV
Trigger: GACTAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGTGGAGATCGGCATCAGTGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp GTGGACATGAGCTGGGTGACATGCTGCTCAGCATTCTaGCGCTCACTGATGCCGATCTCCACCACAGGCACC +
Preference number: 6 (lower is better)
Translates to: VDMSWVTCCSAF*RSLMPISTTGT
Trigger: GGTGCCTGTGGTGGAGATCGGCATCAGTGAGCGCCAGAATGCTGAGCAGCATGTCACCCAGCTCATGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 90 bp GGTGTTTCCGGGCTGCTGGCTGCAGGCTTCGGGTTGGGTGTGCTGTaGGCAATCTCCGTGTCATTGTGGGGCCACGAGTTATTTCCATTG +
Preference number: 6 (lower is better)
Translates to: GVSGLLAAGFGLGVL*AISVSLWGHELFPL
Trigger: CAATGGAAATAACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGCCAGCAGCCCGGAAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS TCA 72 bp CAGCACGGGTGGAGCCTGCCCCATCGTGACAGTAACTaGCGTGTTCCTCAAGGGTTATCCAGGCAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: QHGWSLPHRDSN*RVPQGLSRQWN
Trigger: GTTCCACTGCCTGGATAACCCTTGAGGAACACGTCAGTTACTGTCACGATGGGGCAGGCTCCACCCGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531099.1
CDS GCA 72 bp CAGCTGGCTCTTCGGCAGTCTTCTTGGCAAGCCTTCTaGTCGCCCTGCGGACAACACTTTCCTGTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: QLALRQSSWQAF*SPCGQHFPVWP
Trigger: TGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp CTGATGCCGATCTCCACCACAGGCACCAGCTGGCACTaGGTGTGGTTATCCTCGGGCTTCTTAGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: LMPISTTGTSWH*VWLSSGFLVSI
Trigger: GATGCTGACTAAGAAGCCCGAGGATAACCACACCCAGTGCCAGCTGGTGCCTGTGGTGGAGATCGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp GGAGTCGTCGCTATTCAGATCCATCCCGTAGTTATCTaGGTTGATCTTGGGAGGGGCCCTGTGCCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: GVVAIQIHPVVI*VDLGRGPVPLR
Trigger: CCGCAAGGGCACAGGGCCCCTCCCAAGATCAACCCAGATAACTACGGGATGGATCTGAATAGCGACGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CAA 90 bp TTCTTGGCAAGCCTTCTGCTCGCCCTGCGGACAACACTTTCCTGTTaGGCCACCAGAGAGTACTTCTGGGCTAAGACTTGGGGACTCGGG +
Preference number: 6 (lower is better)
Translates to: FLASLLLALRTTLSC*ATREYFWAKTWGLG
Trigger: CCCGAGTCCCCAAGTCTTAGCCCAGAAGTACTCTCTGGTGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CAA 90 bp GCTGCAGGCTTCGGGTTGGGTGTGCTGTTGGCAATCTCCGTGTCATaGTGGGGCCACGAGTTATTTCCATTGTTCTCAGGGACCTCTGGC +
Preference number: 6 (lower is better)
Translates to: AAGFGLGVLLAISVS*WGHELFPLFSGTSG
Trigger: GCCAGAGGTCCCTGAGAACAATGGAAATAACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAAGCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS TCA 72 bp ATCTTGGGAGGGGCCCTGTGCCCTTGCGGAGTCATCTaGTATGAGGTACAAGCTGGAGACTGCACGTCCACA +
Preference number: 6 (lower is better)
Translates to: ILGGALCPCGVI*YEVQAGDCTST
Trigger: TGTGGACGTGCAGTCTCCAGCTTGTACCTCATATCAGATGACTCCGCAAGGGCACAGGGCCCCTCCCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS TCA 72 bp CGTCGCTATTCAGATCCATCCCGTAGTTATCTGGGTTaGTCTTGGGAGGGGCCCTGTGCCCTTGCGGAGTCA +
Preference number: 6 (lower is better)
Translates to: RRYSDPSRSYLG*SWEGPCALAES
Trigger: TGACTCCGCAAGGGCACAGGGCCCCTCCCAAGATCAACCCAGATAACTACGGGATGGATCTGAATAGCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS TCA 72 bp CCTGGTATGCCCTGCCTACCTCCGAAGCCCTGGAACTaGACTCACCCAACTTTCTGGGGCACCTCAACATTC +
Preference number: 6 (lower is better)
Translates to: PGMPCLPPKPWN*THPTFWGTSTF
Trigger: GAATGTTGAGGTGCCCCAGAAAGTTGGGTGAGTTCAGTTCCAGGGCTTCGGAGGTAGGCAGGGCATACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528037.1
CDS GCA 72 bp CTTCGGCAGTCTTCTTGGCAAGCCTTCTGCTCGCCCTaGGGACAACACTTTCCTGTTTGGCCACCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: LRQSSWQAFCSP*GQHFPVWPPES
Trigger: ACTCTCTGGTGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp CAGGTAACTGTGACAGATGATGCGGCCAGAGGCAGCTaGCTCTTCGGCAGTCTTCTTGGCAAGCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: QVTVTDDAARGS*LFGSLLGKPSA
Trigger: AGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGCCAGCTGCCTCTGGCCGCATCATCTGTCACAGTTACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp TGGGGATGGGCTTCCGGGGATGGGCCTCATCATCGGTaGAGTCGTCGCTATTCAGATCCATCCCGTAGTTAT +
Preference number: 6 (lower is better)
Translates to: WGWASGDGPHHR*SRRYSDPSRSY
Trigger: ATAACTACGGGATGGATCTGAATAGCGACGACTCCACCGATGATGAGGCCCATCCCCGGAAGCCCATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 72 bp TACGCAGGGAAGGGGCTACAGCGGGTGAGTGCTAGGTaGGGCGAGGTTACCGACAGGAAAAGGCTTTACTTA +
Preference number: 6 (lower is better)
Translates to: YAGKGLQRVSAR*GEVTDRKRLYL
Trigger: TAAGTAAAGCCTTTTCCTGTCGGTAACCTCGCCCCACCTAGCACTCACCCGCTGTAGCCCCTTCCCTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528375.1
CDS CAA 72 bp ACGAAGCTGCACTTGGGGTCCATGCGCAGGGGAGTGTaGCGCTTAATAAAGGACTTCATGACGCTGCGTGGG +
Preference number: 6 (lower is better)
Translates to: TKLHLGSMRRGV*RLIKDFMTLRG
Trigger: CCCACGCAGCGTCATGAAGTCCTTTATTAAGCGCAACACTCCCCTGCGCATGGACCCCAAGTGCAGCTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394818.8
ENST00000528375.1
CDS CAA 72 bp CATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTaGCACCTGAGCAGCACGGGTGGAGCCTGCCCCATC +
Preference number: 6 (lower is better)
Translates to: HASPAHRCSQVH*HLSSTGGACPI
Trigger: GATGGGGCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531099.1
CDS CAA 90 bp CTCAGACCTCATGCTTCACCAGCACATAGATGCTCTCAAGTCCATTaGCACCTGAGCAGCACGGGTGGAGCCTGCCCCATCGTGACAGTA +
Preference number: 6 (lower is better)
Translates to: LRPHASPAHRCSQVH*HLSSTGGACPIVTV
Trigger: TACTGTCACGATGGGGCAGGCTCCACCCGTGCTGCTCAGGTGCAAATGGACTTGAGAGCATCTATGTGCTGGTGAAGCATGAGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531099.1
CDS CAA 72 bp AGCCTTCTGCTCGCCCTGCGGACAACACTTTCCTGTTaGGCCACCAGAGAGTACTTCTGGGCTAAGACTTGG +
Preference number: 6 (lower is better)
Translates to: SLLLALRTTLSC*ATREYFWAKTW
Trigger: CCAAGTCTTAGCCCAGAAGTACTCTCTGGTGGCCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
CDS CCA 72 bp GGGTTGGGTGTGCTGTTGGCAATCTCCGTGTCATTGTaGGGCCACGAGTTATTTCCATTGTTCTCAGGGACC +
Preference number: 6 (lower is better)
Translates to: GLGVLLAISVSL*GHELFPLFSGT
Trigger: GGTCCCTGAGAACAATGGAAATAACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS TCA 72 bp AGCTGGTGCGCTTGTGATAGCGGGGCTTGCTCTTCTTaGAGATATCCTCCAAGTCCAGTGGGAGAATGGTTC +
Preference number: 6 (lower is better)
Translates to: SWCACDSGACSS*RYPPSPVGEWF
Trigger: GAACCATTCTCCCACTGGACTTGGAGGATATCTTCAAGAAGAGCAAGCCCCGCTATCACAAGCGCACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CCA 72 bp TGGGAGAATGGTTCCAAAGAGCTCCAGAAGGTTCGGTaGGTGGTAGTACTGGTGAATGATAGCCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: WENGSKELQKVR*VVVLVNDSLAE
Trigger: CTCAGCCAGGCTATCATTCACCAGTACTACCACCCACCGAACCTTCTGGAGCTCTTTGGAACCATTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278849.4
ENST00000394818.8
CDS CAA 72 bp TTCGGGTTGGGTGTGCTGTTGGCAATCTCCGTGTCATaGTGGGGCCACGAGTTATTTCCATTGTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: FGLGVLLAISVS*WGHELFPLFSG
Trigger: CCCTGAGAACAATGGAAATAACTCGTGGCCCCACAATGACACGGAGATTGCCAACAGCACACCCAACCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528375.1
CDS CAA 72 bp GCTGAATTCTCTGGTGAACATGCGCTCGGCCTCCTCTaGGATTTCCTCAAGCCACACCAAGTCCTTATTATC +
Preference number: 6 (lower is better)
Translates to: AEFSGEHALGLL*DFLKPHQVLII
Trigger: GATAATAAGGACTTGGTGTGGCTTGAGGAAATCCAAGAGGAGGCCGAGCGCATGTTCACCAGAGAATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS CAA 90 bp TGGCTCTTTGCTGAATTCTCTGGTGAACATGCGCTCGGCCTCCTCTaGGATTTCCTCAAGCCACACCAAGTCCTTATTATCCATGTTGCA +
Preference number: 6 (lower is better)
Translates to: WLFAEFSGEHALGLL*DFLKPHQVLIIHVA
Trigger: TGCAACATGGATAATAAGGACTTGGTGTGGCTTGAGGAAATCCAAGAGGAGGCCGAGCGCATGTTCACCAGAGAATTCAGCAAAGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5
CDS CAA 90 bp TCCTCTTGGATTTCCTCAAGCCACACCAAGTCCTTATTATCCATGTaGCAGAGAAACTCCATGAGCTTCTGGTCACATAGCTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSWISSSHTKSLLSM*QRNSMSFWSHSSSR
Trigger: CCTGCTGGAGCTATGTGACCAGAAGCTCATGGAGTTTCTCTGCAACATGGATAATAAGGACTTGGTGTGGCTTGAGGAAATCCAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278849.4
ENST00000394818.8
ENST00000528037.1
ENST00000533896.5