Pregenerated sensors for INAVA (Homo sapiens)
Ensembl gene IDs: ENSG00000163362Ensembl transcript IDs: ENST00000367342.8, ENST00000413687.3, ENST00000451872.6, ENST00000526172.1, ENST00000531649.1, ENST00000532631.5
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGGCAGGAGATTCGCTTGAACCCGGGAGACGGGGGTTaGAGTGAGCCGAAATCTTGCTACAGCATTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RQEIRLNPGDGG*SEPKSCYSIPA Trigger: GGCTGGAATGCTGTAGCAAGATTTCGGCTCACTGCAACCCCCGTCTCCCGGGTTCAAGCGAATCTCCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CCA 90 bp | AGAGGCACTGAGCTCTCGGCCCAGGGGGAGAGCAGCAGCCGGAGGTaGCTCGCTATTGCGCCGCCGCTCGACCAGGCAGCGCTGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RGTELSAQGESSSRR*LAIAPPLDQAALEL Trigger: GAGCTCCAGCGCTGCCTGGTCGAGCGGCGGCGCAATAGCGAGCCACCTCCGGCTGCTGCTCTCCCCCTGGGCCGAGAGCTCAGTGCCTCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS TCA 90 bp | CTGAAGAGTCCGATCCAAGAGTCGGGACGGGGCCGCACGCGGGAGTaGCGACGTACCCGCAGGGGTGAGCGAGCTGCGGGAGCAGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: LKSPIQESGRGRTRE*RRTRRGERAAGAAA Trigger: AGCGGCTGCTCCCGCAGCTCGCTCACCCCTGCGGGTACGTCGTCACTCCCGCGTGCGGCCCCGTCCCGACTCTTGGATCGGACTCTTCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS GCA 90 bp | GCACTGTCACCGTGTAGTGAGTGGGGCGGCGGCGGGGAAAGGCGCTaGGACCTCGGCCCTCAGGACCCGCCCGGAAGGAATCCACCCTCA | + |
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Preference number: 5 (lower is better) Translates to: ALSPCSEWGGGGERR*DLGPQDPPGRNPPS Trigger: TGAGGGTGGATTCCTTCCGGGCGGGTCCTGAGGGCCGAGGTCGCAGCGCCTTTCCCCGCCGCCGCCCCACTCACTACACGGTGACAGTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CCA 90 bp | GGCGCCGCCAGTTTCCGCAGCCCAGGCGGGACGAAGCTTCTCTCTTaGTCCCAGTGCCGCCTTTCATTCGCGCGCTCTGGCCTGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GAASFRSPGGTKLLS*SQCRLSFARSGLAG Trigger: CCCAGCCAGGCCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAGAGAAGCTTCGTCCCGCCTGGGCTGCGGAAACTGGCGGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS TCA 90 bp | CGCCTCAGGGTCTCCCAAGCCACAGGCCTGTGCTCTCTCTCCAGCTaGCGGAGCTGCTGGCCGTCCGTCCGTCTCGGCTCACCTGCCTAC | + |
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Preference number: 5 (lower is better) Translates to: RLRVSQATGLCSLSS*RSCWPSVRLGSPAY Trigger: GTAGGCAGGTGAGCCGAGACGGACGGACGGCCAGCAGCTCCGTCAGCTGGAGAGAGAGCACAGGCCTGTGGCTTGGGAGACCCTGAGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413687.3 |
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| CDS GCA 90 bp | GCAGGCCTCCAGCCTCGCTTCCAGGGCCCTCTGCTGCTTGTGCACTaGATGGGTCAGCTCCTTCATTGGGGAGACCGGGCTGTCGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: AGLQPRFQGPLLLVH*MGQLLHWGDRAVGA Trigger: GGCCCCGACAGCCCGGTCTCCCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTGGAAGCGAGGCTGGAGGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS GCA 90 bp | CTGAGGTTCTCCTCCAGGCACAGCCGACGGGCTGCCTCTGTGATCTaGAGCTGCAGGGCCAGCTGGCGCTCCAGGCTGCTTAGGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRFSSRHSRRAASVI*SCRASWRSRLLRGS Trigger: GGACCCCCTAAGCAGCCTGGAGCGCCAGCTGGCCCTGCAGCTGCAGATCACAGAGGCAGCCCGTCGGCTGTGCCTGGAGGAGAACCTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS GCA 90 bp | GGCTCGCTATTGCGCCGCCGCTCGACCAGGCAGCGCTGGAGCTCCTaGAGCTTCTTCTCCTCCTGCAGCATGGAGTGCTTCCGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GSLLRRRSTRQRWSS*SFFSSCSMECFRCR Trigger: GCGGCAGCGGAAGCACTCCATGCTGCAGGAGGAGAAGAAGCTGCAGGAGCTCCAGCGCTGCCTGGTCGAGCGGCGGCGCAATAGCGAGCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CCA 90 bp | TGGTCGCGGGAAAGCAGGAATCTGGCACTGTCACCGTGTAGTGAGTaGGGCGGCGGCGGGGAAAGGCGCTGCGACCTCGGCCCTCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: WSRESRNLALSPCSE*GGGGERRCDLGPQD Trigger: GTCCTGAGGGCCGAGGTCGCAGCGCCTTTCCCCGCCGCCGCCCCACTCACTACACGGTGACAGTGCCAGATTCCTGCTTTCCCGCGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS GCA 90 bp | TTCTCCTCCAGGCACAGCCGACGGGCTGCCTCTGTGATCTGCAGCTaGAGGGCCAGCTGGCGCTCCAGGCTGCTTAGGGGGTCCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSRHSRRAASVICS*RASWRSRLLRGSSL Trigger: CAGAGAGGACCCCCTAAGCAGCCTGGAGCGCCAGCTGGCCCTGCAGCTGCAGATCACAGAGGCAGCCCGTCGGCTGTGCCTGGAGGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS GCA 90 bp | TCCAGGCAGGCCTCCAGCCTCGCTTCCAGGGCCCTCTGCTGCTTGTaGACTGCATGGGTCAGCTCCTTCATTGGGGAGACCGGGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRQASSLASRALCCL*TAWVSSFIGETGLS Trigger: CGACAGCCCGGTCTCCCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTGGAAGCGAGGCTGGAGGCCTGCCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS GCA 90 bp | TGGACTGGAGCCCGTTCTGGGCTCCCAGCCTCAGGTCCTGTTGGCTaGAGACCCTCAAGGGTTTGGGGTGGGAGAGGCCGAGAAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WTGARSGLPASGPVG*RPSRVWGGRGREGG Trigger: CCCACCTTCTCGGCCTCTCCCACCCCAAACCCTTGAGGGTCTGCAGCCAACAGGACCTGAGGCTGGGAGCCCAGAACGGGCTCCAGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CCA 90 bp | AGATGTCGGGGCTGCTGCTGCCCGGCGAAGTGGGGTGGGAGATGCTaGAGACGTCAGAGCCACTGTCTTCTGAGCAGGAGTGGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RCRGCCCPAKWGGRC*RRQSHCLLSRSGRR Trigger: CCGCCTGCCACTCCTGCTCAGAAGACAGTGGCTCTGACGTCTCCAGCATCTCCCACCCCACTTCGCCGGGCAGCAGCAGCCCCGACATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS GCA 90 bp | AGTTTCCGCAGCCCAGGCGGGACGAAGCTTCTCTCTTGGTCCCAGTaGCGCCTTTCATTCGCGCGCTCTGGCCTGGCTGGGGCCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFRSPGGTKLLSWSQ*RLSFARSGLAGASF Trigger: AAAACTGGCCCCAGCCAGGCCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAGAGAAGCTTCGTCCCGCCTGGGCTGCGGAAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 90 bp | CAGGGCCCTCTGCTGCTTGTGCACTGCATGGGTCAGCTCCTTCATTaGGGAGACCGGGCTGTCGGGGCCAGACTGCAGGATGATGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QGPLLLVHCMGQLLH*GDRAVGARLQDDAT Trigger: AGTGGCATCATCCTGCAGTCTGGCCCCGACAGCCCGGTCTCCCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS CCA 90 bp | CAGGCTGGTTTCCTTCCAGGGGCTGTTCTGGACTGGAGCCCGTTCTaGGCTCCCAGCCTCAGGTCCTGTTGGCTGCAGACCCTCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QAGFLPGAVLDWSPF*APSLRSCWLQTLKG Trigger: ACCCTTGAGGGTCTGCAGCCAACAGGACCTGAGGCTGGGAGCCCAGAACGGGCTCCAGTCCAGAACAGCCCCTGGAAGGAAACCAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CCA 90 bp | ATAGGGGTGGTCCAGGCTGGTTTCCTTCCAGGGGCTGTTCTGGACTaGAGCCCGTTCTGGGCTCCCAGCCTCAGGTCCTGTTGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IGVVQAGFLPGAVLD*SPFWAPSLRSCWLQ Trigger: CTGCAGCCAACAGGACCTGAGGCTGGGAGCCCAGAACGGGCTCCAGTCCAGAACAGCCCCTGGAAGGAAACCAGCCTGGACCACCCCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CCA 90 bp | GAGGCTGCAGAAAGGAGATGTCGGGGCTGCTGCTGCCCGGCGAAGTaGGGTGGGAGATGCTGGAGACGTCAGAGCCACTGTCTTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: EAAERRCRGCCCPAK*GGRCWRRQSHCLLS Trigger: GCTCAGAAGACAGTGGCTCTGACGTCTCCAGCATCTCCCACCCCACTTCGCCGGGCAGCAGCAGCCCCGACATCTCCTTTCTGCAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS TCA 90 bp | GCATACCAAGGCCCAGAGGAAAGAGGGGAAGACGCAAGAAGGGACTaGAGAGTCCGATCCAAGAGTCGGGACGGGGCCGCACGCGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: AYQGPEERGEDARRD*RVRSKSRDGAARGS Trigger: ACTCCCGCGTGCGGCCCCGTCCCGACTCTTGGATCGGACTCTTCAGTCCCTTCTTGCGTCTTCCCCTCTTTCCTCTGGGCCTTGGTATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS CCA 90 bp | TGCAGAAAGGAGATGTCGGGGCTGCTGCTGCCCGGCGAAGTGGGGTaGGAGATGCTGGAGACGTCAGAGCCACTGTCTTCTGAGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: CRKEMSGLLLPGEVG*EMLETSEPLSSEQE Trigger: CTCCTGCTCAGAAGACAGTGGCTCTGACGTCTCCAGCATCTCCCACCCCACTTCGCCGGGCAGCAGCAGCCCCGACATCTCCTTTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CCA 90 bp | AGGGCTCAGAAGACTTCCTGGGCTTCTCATAGGGGTGGTCCAGGCTaGTTTCCTTCCAGGGGCTGTTCTGGACTGGAGCCCGTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: RAQKTSWASHRGGPG*FPSRGCSGLEPVLG Trigger: GCCCAGAACGGGCTCCAGTCCAGAACAGCCCCTGGAAGGAAACCAGCCTGGACCACCCCTATGAGAAGCCCAGGAAGTCTTCTGAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CCA 90 bp | CTCTTGGTCCCAGTGCCGCCTTTCATTCGCGCGCTCTGGCCTGGCTaGGGCCAGTTTTCATTCCTGGAGACCCCTAAGTGGAAGAATGAA | + |
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Preference number: 5 (lower is better) Translates to: LLVPVPPFIRALWPG*GQFSFLETPKWKNE Trigger: TTCATTCTTCCACTTAGGGGTCTCCAGGAATGAAAACTGGCCCCAGCCAGGCCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 90 bp | ATTTGCAGCATCCCAAATGTTAAAGATCCCAAGACATCTGTCCCCTaGGGCATACCAAGGCCCAGAGGAAAGAGGGGAAGACGCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ICSIPNVKDPKTSVP*GIPRPRGKRGRRKK Trigger: CTTCTTGCGTCTTCCCCTCTTTCCTCTGGGCCTTGGTATGCCCCAGGGGACAGATGTCTTGGGATCTTTAACATTTGGGATGCTGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS TCA 72 bp | GGGCCGCACGCGGGAGTGACGACGTACCCGCAGGGGTaGGCGAGCTGCGGGAGCAGCCGCTCGAGGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: GPHAGVTTYPQG*ASCGSSRSRGE Trigger: CTCGCCCCTCGAGCGGCTGCTCCCGCAGCTCGCTCACCCCTGCGGGTACGTCGTCACTCCCGCGTGCGGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS GCA 72 bp | CGGGAGCAGCCGCTCGAGGGGCGAGGCTGTCCCCTTTaGCCCGCTTTCGGACGCCCGCGCGGTGGGACACCC | + |
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Preference number: 6 (lower is better) Translates to: REQPLEGRGCPL*PAFGRPRGGTP Trigger: GGGTGTCCCACCGCGCGGGCGTCCGAAAGCGGGGCAAAGGGGACAGCCTCGCCCCTCGAGCGGCTGCTCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 72 bp | GCCCCGCTTTCGGACGCCCGCGCGGTGGGACACCCCTaGCGCCGCCAGTTTCCGCAGCCCAGGCGGGACGAA | + |
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Preference number: 6 (lower is better) Translates to: APLSDARAVGHP*RRQFPQPRRDE Trigger: TTCGTCCCGCCTGGGCTGCGGAAACTGGCGGCGCCAGGGGTGTCCCACCGCGCGGGCGTCCGAAAGCGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 72 bp | GAGCTCTCGGCCCAGGGGGAGAGCAGCAGCCGGAGGTaGCTCGCTATTGCGCCGCCGCTCGACCAGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: ELSAQGESSSRR*LAIAPPLDQAA Trigger: CGCTGCCTGGTCGAGCGGCGGCGCAATAGCGAGCCACCTCCGGCTGCTGCTCTCCCCCTGGGCCGAGAGCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CAA 72 bp | CCCAGGGGGAGAGCAGCAGCCGGAGGTGGCTCGCTATaGCGCCGCCGCTCGACCAGGCAGCGCTGGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PRGRAAAGGGSL*RRRSTRQRWSS Trigger: GGAGCTCCAGCGCTGCCTGGTCGAGCGGCGGCGCAATAGCGAGCCACCTCCGGCTGCTGCTCTCCCCCTGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS TCA 72 bp | CCGATCCAAGAGTCGGGACGGGGCCGCACGCGGGAGTaGCGACGTACCCGCAGGGGTGAGCGAGCTGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: PIQESGRGRTRE*RRTRRGERAAG Trigger: TCCCGCAGCTCGCTCACCCCTGCGGGTACGTCGTCACTCCCGCGTGCGGCCCCGTCCCGACTCTTGGATCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS GCA 72 bp | CCAGGGGGAGAGCAGCAGCCGGAGGTGGCTCGCTATTaGGCCGCCGCTCGACCAGGCAGCGCTGGAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGGEQQPEVARY*AAARPGSAGAP Trigger: AGGAGCTCCAGCGCTGCCTGGTCGAGCGGCGGCGCAATAGCGAGCCACCTCCGGCTGCTGCTCTCCCCCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS GCA 72 bp | CCGTGTAGTGAGTGGGGCGGCGGCGGGGAAAGGCGCTaGGACCTCGGCCCTCAGGACCCGCCCGGAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PCSEWGGGGERR*DLGPQDPPGRN Trigger: ATTCCTTCCGGGCGGGTCCTGAGGGCCGAGGTCGCAGCGCCTTTCCCCGCCGCCGCCCCACTCACTACACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS TCA 72 bp | GCATGGAGTGCTTCCGCTGCCGCCGAGCCTGCCTGCTaGGGTTCTCCTCCAGGCACAGCCGACGGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: AWSASAAAEPAC*GSPPGTADGLP Trigger: AGGCAGCCCGTCGGCTGTGCCTGGAGGAGAACCTCAGCAGGCAGGCTCGGCGGCAGCGGAAGCACTCCATGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CCA 72 bp | GGGCAGCGGGGGCTTGGTCGCGGGAAAGCAGGAATCTaGCACTGTCACCGTGTAGTGAGTGGGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GQRGLGRGKAGI*HCHRVVSGAAA Trigger: CGCCGCCGCCCCACTCACTACACGGTGACAGTGCCAGATTCCTGCTTTCCCGCGACCAAGCCCCCGCTGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CAA 90 bp | TGGCGCCGCCAGTTTCCGCAGCCCAGGCGGGACGAAGCTTCTCTCTaGGTCCCAGTGCCGCCTTTCATTCGCGCGCTCTGGCCTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WRRQFPQPRRDEASL*VPVPPFIRALWPGW Trigger: CCAGCCAGGCCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAGAGAAGCTTCGTCCCGCCTGGGCTGCGGAAACTGGCGGCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS GCA 72 bp | TCCTGCAGCATGGAGTGCTTCCGCTGCCGCCGAGCCTaGCTGCTGAGGTTCTCCTCCAGGCACAGCCGACGG | + |
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Preference number: 6 (lower is better) Translates to: SCSMECFRCRRA*LLRFSSRHSRR Trigger: CCGTCGGCTGTGCCTGGAGGAGAACCTCAGCAGGCAGGCTCGGCGGCAGCGGAAGCACTCCATGCTGCAGGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS TCA 72 bp | GTCTCCCAAGCCACAGGCCTGTGCTCTCTCTCCAGCTaGCGGAGCTGCTGGCCGTCCGTCCGTCTCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VSQATGLCSLSS*RSCWPSVRLGS Trigger: TGAGCCGAGACGGACGGACGGCCAGCAGCTCCGTCAGCTGGAGAGAGAGCACAGGCCTGTGGCTTGGGAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413687.3 |
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| CDS GCA 72 bp | GCCCGTTCTGGGCTCCCAGCCTCAGGTCCTGTTGGCTaGAGACCCTCAAGGGTTTGGGGTGGGAGAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ARSGLPASGPVG*RPSRVWGGRGR Trigger: TCGGCCTCTCCCACCCCAAACCCTTGAGGGTCTGCAGCCAACAGGACCTGAGGCTGGGAGCCCAGAACGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS GCA 72 bp | TGTATCTCAGGGGTGGCTGGGGCACTGGTGCGGCCCTaGCACTGGCCAGGAACACCACGGATGGGAACCACG | + |
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Preference number: 6 (lower is better) Translates to: CISGVAGALVRP*HWPGTPRMGTT Trigger: CGTGGTTCCCATCCGTGGTGTTCCTGGCCAGTGGCAGGGCCGCACCAGTGCCCCAGCCACCCCTGAGATACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS GCA 72 bp | AGCCCAGGCGGGACGAAGCTTCTCTCTTGGTCCCAGTaGCGCCTTTCATTCGCGCGCTCTGGCCTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SPGGTKLLSWSQ*RLSFARSGLAG Trigger: CCCAGCCAGGCCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAGAGAAGCTTCGTCCCGCCTGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 72 bp | TGGTGCGGCCCTGCCACTGGCCAGGAACACCACGGATaGGAACCACGTGGTAGGAGGCAGGCTCCAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: WCGPATGQEHHG*EPRGRRQAPEA Trigger: GGCTTCTGGAGCCTGCCTCCTACCACGTGGTTCCCATCCGTGGTGTTCCTGGCCAGTGGCAGGGCCGCACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CAA 90 bp | TCCTCCAGGCAGGCCTCCAGCCTCGCTTCCAGGGCCCTCTGCTGCTaGTGCACTGCATGGGTCAGCTCCTTCATTGGGGAGACCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRQASSLASRALCC*CTAWVSSFIGETGL Trigger: CAGCCCGGTCTCCCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTGGAAGCGAGGCTGGAGGCCTGCCTGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS GCA 72 bp | GGGAGAGAGGCTGCAGAAAGGAGATGTCGGGGCTGCTaGTGCCCGGCGAAGTGGGGTGGGAGATGCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GREAAERRCRGC*CPAKWGGRCWR Trigger: TCTCCAGCATCTCCCACCCCACTTCGCCGGGCAGCAGCAGCCCCGACATCTCCTTTCTGCAGCCTCTCTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CCA 72 bp | GGGTGGTCCAGGCTGGTTTCCTTCCAGGGGCTGTTCTaGACTGGAGCCCGTTCTGGGCTCCCAGCCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GWSRLVSFQGLF*TGARSGLPASG Trigger: ACCTGAGGCTGGGAGCCCAGAACGGGCTCCAGTCCAGAACAGCCCCTGGAAGGAAACCAGCCTGGACCACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS GCA 72 bp | AGGCAGGCCTCCAGCCTCGCTTCCAGGGCCCTCTGCTaGTTGTGCACTGCATGGGTCAGCTCCTTCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: RQASSLASRALC*LCTAWVSSFIG Trigger: CCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTGGAAGCGAGGCTGGAGGCCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS CCA 72 bp | TTCCTTCCAGGGGCTGTTCTGGACTGGAGCCCGTTCTaGGCTCCCAGCCTCAGGTCCTGTTGGCTGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: FLPGAVLDWSPF*APSLRSCWLQT Trigger: GGTCTGCAGCCAACAGGACCTGAGGCTGGGAGCCCAGAACGGGCTCCAGTCCAGAACAGCCCCTGGAAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS CCA 72 bp | GGCTGCTGCTGCCCGGCGAAGTGGGGTGGGAGATGCTaGAGACGTCAGAGCCACTGTCTTCTGAGCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GCCCPAKWGGRC*RRQSHCLLSRS Trigger: ACTCCTGCTCAGAAGACAGTGGCTCTGACGTCTCCAGCATCTCCCACCCCACTTCGCCGGGCAGCAGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367342.8 ENST00000413687.3 |
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| CDS CCA 72 bp | AGTTTCCGCAGCCCAGGCGGGACGAAGCTTCTCTCTTaGTCCCAGTGCCGCCTTTCATTCGCGCGCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SFRSPGGTKLLS*SQCRLSFARSG Trigger: GCCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAGAGAAGCTTCGTCCCGCCTGGGCTGCGGAAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CAA 72 bp | CAGGCCTCCAGCCTCGCTTCCAGGGCCCTCTGCTGCTaGTGCACTGCATGGGTCAGCTCCTTCATTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QASSLASRALCC*CTAWVSSFIGE Trigger: CTCCCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTGGAAGCGAGGCTGGAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS CAA 72 bp | CAGTTTCCGCAGCCCAGGCGGGACGAAGCTTCTCTCTaGGTCCCAGTGCCGCCTTTCATTCGCGCGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QFPQPRRDEASL*VPVPPFIRALW Trigger: CCAGAGCGCGCGAATGAAAGGCGGCACTGGGACCAAGAGAGAAGCTTCGTCCCGCCTGGGCTGCGGAAACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS TCA 72 bp | GGCCCAGAGGAAAGAGGGGAAGACGCAAGAAGGGACTaGAGAGTCCGATCCAAGAGTCGGGACGGGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: GPEERGEDARRD*RVRSKSRDGAA Trigger: TGCGGCCCCGTCCCGACTCTTGGATCGGACTCTTCAGTCCCTTCTTGCGTCTTCCCCTCTTTCCTCTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS GCA 72 bp | TCCAGGCAGGCCTCCAGCCTCGCTTCCAGGGCCCTCTaGTGCTTGTGCACTGCATGGGTCAGCTCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SRQASSLASRAL*CLCTAWVSSFI Trigger: AATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAGAGGGCCCTGGAAGCGAGGCTGGAGGCCTGCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 |
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| CDS CCA 72 bp | CTGCTGCTTGTGCACTGCATGGGTCAGCTCCTTCATTaGGGAGACCGGGCTGTCGGGGCCAGACTGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLLVHCMGQLLH*GDRAVGARLQD Trigger: ATCCTGCAGTCTGGCCCCGACAGCCCGGTCTCCCCAATGAAGGAGCTGACCCATGCAGTGCACAAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 72 bp | CCAGTGCCGCCTTTCATTCGCGCGCTCTGGCCTGGCTaGGGCCAGTTTTCATTCCTGGAGACCCCTAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PVPPFIRALWPG*GQFSFLETPKW Trigger: CCACTTAGGGGTCTCCAGGAATGAAAACTGGCCCCAGCCAGGCCAGAGCGCGCGAATGAAAGGCGGCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451872.6 ENST00000532631.5 |
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| CDS CCA 72 bp | AAGACTTCCTGGGCTTCTCATAGGGGTGGTCCAGGCTaGTTTCCTTCCAGGGGCTGTTCTGGACTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: KTSWASHRGGPG*FPSRGCSGLEP Trigger: GGGCTCCAGTCCAGAACAGCCCCTGGAAGGAAACCAGCCTGGACCACCCCTATGAGAAGCCCAGGAAGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367342.8 ENST00000413687.3 ENST00000526172.1 |
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| CDS TCA 72 bp | CCAGGGCCTGAAGTTGGCCAGTGGGATCTTGATTCCTaGTGTGGGAAAGTCAGCAACTACACCAGTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PGPEVGQWDLDS*CGKVSNYTSCL Trigger: GAGACAACTGGTGTAGTTGCTGACTTTCCCACATCAGGAATCAAGATCCCACTGGCCAACTTCAGGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531649.1 |
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| CDS CAA 90 bp | CAACAGGACTTTAGATCCCAGGGCCTGAAGTTGGCCAGTGGGATCTaGATTCCTGATGTGGGAAAGTCAGCAACTACACCAGTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QQDFRSQGLKLASGI*IPDVGKSATTPVVS Trigger: GGAGACAACTGGTGTAGTTGCTGACTTTCCCACATCAGGAATCAAGATCCCACTGGCCAACTTCAGGCCCTGGGATCTAAAGTCCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531649.1 |
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| CDS CAA 90 bp | CCTTCTGTGCTCTCACAACAGGACTTTAGATCCCAGGGCCTGAAGTaGGCCAGTGGGATCTTGATTCCTGATGTGGGAAAGTCAGCAACT | + |
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Preference number: 6 (lower is better) Translates to: PSVLSQQDFRSQGLK*ASGILIPDVGKSAT Trigger: AGTTGCTGACTTTCCCACATCAGGAATCAAGATCCCACTGGCCAACTTCAGGCCCTGGGATCTAAAGTCCTGTTGTGAGAGCACAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531649.1 |
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| CDS CCA 72 bp | ATCCCAAATGTTAAAGATCCCAAGACATCTGTCCCCTaGGGCATACCAAGGCCCAGAGGAAAGAGGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: IPNVKDPKTSVP*GIPRPRGKRGR Trigger: TCTTCCCCTCTTTCCTCTGGGCCTTGGTATGCCCCAGGGGACAGATGTCTTGGGATCTTTAACATTTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367342.8 |
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| CDS CAA 72 bp | TTTAGATCCCAGGGCCTGAAGTTGGCCAGTGGGATCTaGATTCCTGATGTGGGAAAGTCAGCAACTACACCA | + |
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Preference number: 6 (lower is better) Translates to: FRSQGLKLASGI*IPDVGKSATTP Trigger: TGGTGTAGTTGCTGACTTTCCCACATCAGGAATCAAGATCCCACTGGCCAACTTCAGGCCCTGGGATCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531649.1 |
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