Pregenerated sensors for INAFM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000259330Ensembl transcript IDs: ENST00000638170.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAAACTTATATTTCAGAAACAGGAGGGGAACAGGAGAAAGTGAGTaGTTTAAGAAGCCGTGTTTGTGCCCTTCTGGCCAGGTGTACTTT | + |
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Preference number: 1 (lower is better) Translates to: INLYFRNRRGTGESE*FKKPCLCPSGQVYF Trigger: AAAGTACACCTGGCCAGAAGGGCACAAACACGGCTTCTTAAATCACTCACTTTCTCCTGTTCCCCTCCTGTTTCTGAAATATAAGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGTGGGCTTGGGGAGAATaGTTCCCGGCGGCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GPLAEDLAAGLPLRGQPAWAWGE*FPAAPS Trigger: GCTGGGGGCCGCCGGGAACCATTCTCCCCAAGCCCA...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGCCTGCTGCGAAGTCCTaGCTCTGGGCTTGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GPLAEDLAAGLPLRGQPAPAAKS*LWAWGE Trigger: TTCTCCCCAAGCCCAGAGGCAGGACTTCGCAGCAGG...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGGCGAAGTCCTGCCTCTaGGCTTGGGGAGAATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GPLAEDLAAGLPLRGQPAAKSCL*AWGEWF Trigger: GAACCATTCTCCCCAAGCCCAGAGGCAGGACTTCGC...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCACCTTGGCTGAAGATCTaGCTGCGGGCCTCCCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPPWLKI*LRASRS Trigger: GGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGG...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACTCCTGCCTCTGGGCTTaGGGAGAATGGTTCCCGGCG | + |
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Preference number: 2 (lower is better) Translates to: PHPPTAQGPGAARSWAANSCLWA*GEWFPA Trigger: CGCCGGGAACCATTCTCCCCAAGCCCAGAGGCAGGA...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCGAATCGTGGTCCCTTaGCTGAAGATCTGGCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: PHPPTAQGPGAARSWAANRIVVP*LKIWLR Trigger: CCGCAGCCAGATCTTCAGCCAAGGGACCACGATTCG...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGGGGCCAGCCGGCGATaGTGGGAGTGTGAGGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: LSCYYRAHNRTWLKARLLGASRR*WECEGR Trigger: ACGCCCCTCACACTCCCACCATCGCCGGCTGGCCCC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTGCGATGGTGGGAGTGTaGGGGGCGTTCACTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: QQEASLVGALGWKEEGMSAMVGV*GAFTLV Trigger: CACGAGAGTGAACGCCCCTCACACTCCCACCATCGC...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTTCCACCCCATCCTGCTaGGAAGTCCTGCCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QQEASLVGALGWKEEGMSSTPSC*EVLPLG Trigger: GCCCAGAGGCAGGACTTCGCAGCAGGATGGGGTGGA...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGGGCGTTCACTCTCGTaGGGGTCACTCCCGCGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSCYYRAHNRTWLKARLLGRSLS*GSLPRA Trigger: AGCCCGCGGGAGTGACCCCCACGAGAGTGAACGCCC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR CAA 90 bp | TTCACAGCTAGGGCTGGAGCAAATGTCCCAATTCCAGTGAAGGCTTaGGAGAGTCAGGAGGCCAGCAGCTGGACCTATGAGTGGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FTARAGANVPIPVKA*ESQEASSWTYEWPL Trigger: GAGAGGCCACTCATAGGTCCAGCTGCTGGCCTCCTGACTCTCCAAAGCCTTCACTGGAATTGGGACATTTGCTCCAGCCCTAGCTGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGGGGAAGGCCAGGATTaGAGCACAGCAGCATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSCYYRAHNRTWLKARLLGEGQD*STAALL Trigger: GAGCAATGCTGCTGTGCTTCAATCCTGGCCTTCCCC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR GCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCCTCTCCACCCCATCCTaGTGCGAAGTCCTGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HYFWCPPPFESFSLLKKSLSTPS*CEVLPL Trigger: CAGAGGCAGGACTTCGCAGCAGGATGGGGTGGAGAG...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTCAAATAGCCCTTGCTTaGCCCCTTCAGTCAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: QQEASLVGALGWKEEGMSQIALA*PLQSVA Trigger: AGCTACTGACTGAAGGGGTCAAGCAAGGGCTATTTG...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGAGCTCCACTACTTTTaGTGCCCTCCTCCTTTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LSCYYRAHNRTWLKARLLELHYF*CPPPFE Trigger: CTCGAAAGGAGGAGGGCACCAAAAGTAGTGGAGCTC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGAACAGGAGAAAGTGAGTaGTTTAAGAAGCCGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGTGESE*FKKPCL Trigger: CAAACACGGCTTCTTAAATCACTCACTTTCTCCTGT...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGAGGGAAGGCAAAAGTaGTTGCCGGAACAAGACAAC | + |
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Preference number: 2 (lower is better) Translates to: LSCYYRAHNRTWLKARLLEGRQK*LPEQDN Trigger: GTTGTCTTGTTCCGGCAATCACTTTTGCCTTCCCTC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGCCAGATACTGAGGGCTaGAACAAGAAGCCTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LSCYYRAHNRTWLKARLLPDTEG*NKKPLW Trigger: CCAAAGAGGCTTCTTGTTGCAGCCCTCAGTATCTGG...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACTACGGCTCAGGGCCCTaGTGCAGCACGGTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GRIYIEFYVIIASSAYVNYGSGP*CSTVLG Trigger: GCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTA...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACTCGTGGTCCCTTGGCTaGAGATCTGGCTGCGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GRIYIEFYVIIASSAYVNSWSLG*RSGCGP Trigger: AGGCCCGCAGCCAGATCTTCAGCCAAGGGACCACGA...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR GCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAGAAGCACAGCAGCATTaGTCTTTCCCTTCCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: YYRAHNRTWLKARLLSCKEAQQH*SFPSFL Trigger: GAGGAAGGAAGGGAAAGAGCAATGCTGCTGTGCTTC...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAATATAGGCCAGAAAACTaGAGAGACAAACTGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: YYRAHNRTWLKARLLSCKYRPEN*RDKLFQ Trigger: CTGAAACAGTTTGTCTCTCCAGTTTTCTGGCCTATA...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR CCA 72 bp | TGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGATaGTGGGAGTGTGAGGGGCGTTCACTCTCGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: WLRASRSGASRR*WECEGRSLSWG Trigger: CCCCCACGAGAGTGAACGCCCCTCACACTCCCACCATCGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR GCA 72 bp | CCCGCGGGCTCTCCACCCCATCCTGCTGCGAAGTCCTaGCTCTGGGCTTGGGGAGAATGGTTCCCGGCGGCC | + |
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Preference number: 3 (lower is better) Translates to: PAGSPPHPAAKS*LWAWGEWFPAA Trigger: GGCCGCCGGGAACCATTCTCCCCAAGCCCAGAGGCAGGACTTCGCAGCAGGATGGGGTGGAGAGCCCGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGTCCTGCCTCTGGGCTaGGGGAGAATGGTTCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: LSCYYRAHNRTWLKARLLVLPLG*GRMVPG Trigger: GCCGGGAACCATTCTCCCCAAGCCCAGAGGCAGGAC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR TCA 72 bp | TTTCCCTTCCTTCCTCCCTGGCCCATATCCAGATACTaGGGGCTGCAACAAGAAGCCTCTTTGGTGGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: FPFLPPWPISRY*GLQQEASLVGA Trigger: TGCCCCCACCAAAGAGGCTTCTTGTTGCAGCCCTCAGTATCTGGATATGGGCCAGGGAGGAAGGAAGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CAA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTTTTAAGAAGCCGTGTTaGTGCCCTTCTGGCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: QQEASLVGALGWKEEGMSFKKPC*CPSGQV Trigger: CACCTGGCCAGAAGGGCACAAACACGGCTTCTTAAA...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CAA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAGCGAATCGTGGTCCCTaGGCTGAAGATCTGGCTGCG | + |
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Preference number: 3 (lower is better) Translates to: YYRAHNRTWLKARLLSCKANRGP*AEDLAA Trigger: CGCAGCCAGATCTTCAGCCAAGGGACCACGATTCGC...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CAA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAGCCACTGCAACTAGGTaGACGTACCTGAGCTCCACT | + |
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Preference number: 3 (lower is better) Translates to: YYRAHNRTWLKARLLSCKATATR*TYLSST Trigger: AGTGGAGCTCAGGTACGTCAACCTAGTTGCAGTGGC...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR CCA 72 bp | GTCCAGAAAGCAGGGATCAGGAAGAGGACAGGGAAGTaGACTCCCAGATGTTCTACAAGTTCAAAGGATTCT | + |
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Preference number: 3 (lower is better) Translates to: VQKAGIRKRTGK*TPRCSTSSKDS Trigger: AGAATCCTTTGAACTTGTAGAACATCTGGGAGTCCACTTCCCTGTCCTCTTCCTGATCCCTGCTTTCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR-3UTR CAA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAACTACCCACACTCAATaGCCTAAAAGCAAATGGCAG | + |
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Preference number: 3 (lower is better) Translates to: YYRAHNRTWLKARLLSCKTTHTQ*PKSKWQ Trigger: CTGCCATTTGCTTTTAGGCAATTGAGTGTGGGTAGT...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR GCA 72 bp | AAGGAAATGGAATCCAAATTGAGGAAGTCTAGTTCTTaGTACCCCAGAGCTACATGTATGTCATTTCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: KEMESKLRKSSS*YPRATCMSFLL Trigger: CAAGAGAAATGACATACATGTAGCTCTGGGGTAGCAAGAACTAGACTTCCTCAATTTGGATTCCATTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGCGGCCTTTGCCCCGGTaGTCCACGGCCCCGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GPLAEDLAAGLPLRGQPARPLPR*STAPAG Trigger: TCCAGCCGGGGCCGTGGAGCACCGGGGCAAAGGCCG...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGCCTTGGCTGAAGATCTaGCTGCGGGCCTCCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPLAEDLAAGLPLRGQPAPWLKI*LRASRS Trigger: GGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGG...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACGGCTCAGGGCCCTGGTaGAGCACGGTCCTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PHPPTAQGPGAARSWAANGSGPW*STVLGS Trigger: GCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCC...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCATGTCCCCGGTGTAGGTaGCCGGCTTGCCCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPCPRCR*PACPAR Trigger: CCGAGCGGGGCAAGCCGGCCACCTACACCGGGGACA...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGGGCGTTCACTCTCGTaGGGGTCACTCCCGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPGRSLS*GSLPRA Trigger: AGCCCGCGGGAGTGACCCCCACGAGAGTGAACGCCC...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCATACGGCTCAGGGCCCTaGTGCAGCACGGTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPYGSGP*CSTVLG Trigger: GCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTA...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACTCGTGGTCCCTTGGCTaGAGATCTGGCTGCGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PHPPTAQGPGAARSWAANSWSLG*RSGCGP Trigger: AGGCCCGCAGCCAGATCTTCAGCCAAGGGACCACGA...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGAAGAAGCCGTGTTTGTaGCCTTCTGGCCAGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GPLAEDLAAGLPLRGQPAKKPCL*PSGQVY Trigger: GTACACCTGGCCAGAAGGGCACAAACACGGCTTCTT...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACGCGAAGTCCTGCCTCTaGGCTTGGGGAGAATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PHPPTAQGPGAARSWAANAKSCL*AWGEWF Trigger: GAACCATTCTCCCCAAGCCCAGAGGCAGGACTTCGC...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGCTAGCCAAGAGACCCTaGAGGTGTTACCAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PPTAQGPGAARSWAANPQLAKRP*RCYQPA Trigger: AGCAGGCTGGTAACACCTCCAGGGTCTCTTGGCTAG...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCACTCCACTACTTTTGGTaGCCTCCTCCTTTCGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPLHYFW*PPPFES Trigger: GCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTGGAG...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACGAGCTCCACTACTTTTaGTGCCCTCCTCCTTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: PHPPTAQGPGAARSWAANELHYF*CPPPFE Trigger: CTCGAAAGGAGGAGGGCACCAAAAGTAGTGGAGCTC...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGGCCAGGTGTACTTTTTaGGGGACAGCAAATAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PPTAQGPGAARSWAANPQARCTF*GTANSP Trigger: AGGGCTATTTGCTGTCCCCCAAAAAGTACACCTGGC...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | CCCCATCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACAGGCTTCCCAATGACTaGAGTCCTAGTCAGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: PHPPTAQGPGAARSWAANRLPND*SPSQLL Trigger: TAGCAGCTGACTAGGACTTCAGTCATTGGGAAGCCT...GTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGATGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCACCAGATACTGAGGGCTaGAACAAGAAGCCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPPDTEG*NKKPLW Trigger: CCAAAGAGGCTTCTTGTTGCAGCCCTCAGTATCTGG...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGACAGCAAATAGCCCTTaGTTGACCCCTTCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTAQGPGAARSWAANPQTANSP*LTPSVS Trigger: ACTGACTGAAGGGGTCAAGCAAGGGCTATTTGCTGT...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGGAAGGCAAAAGTGATTaGCGGAACAAGACAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: PPTAQGPGAARSWAANPQEGKSD*RNKTTF Trigger: AAATGTTGTCTTGTTCCGGCAATCACTTTTGCCTTC...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCACTACCCACACTCAATTaGCTAAAAGCAAATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPLPTLN*LKANGR Trigger: TCTGCCATTTGCTTTTAGGCAATTGAGTGTGGGTAG...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGACGCAGAAGGGTTTGGTaGCGGGATCTCCCCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGRRRVW*RDLPTP Trigger: AGGGGTGGGGAGATCCCGGCACCAAACCCTTCTGCG...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGACTCTCCACCCCATCCTaGTGCGAAGTCCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGLSTPS*CEVLPL Trigger: CAGAGGCAGGACTTCGCAGCAGGATGGGGTGGAGAG...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAATCCCAGACGGGCCAGTaGCGTTGGAGCCGCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKSQTGQ*RWSRRG Trigger: CCCCCGGCGGCTCCAACGCCACTGGCCCGTCTGGGA...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CCA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTTCCTGCCTCTGGGCTTaGGGAGAATGGTTCCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QQEASLVGALGWKEEGMSSCLWA*GEWFPA Trigger: CGCCGGGAACCATTCTCCCCAAGCCCAGAGGCAGGA...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTCCTGCTGCGAAGTCCTaGCTCTGGGCTTGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQEASLVGALGWKEEGMSPAAKS*LWAWGE Trigger: TTCTCCCCAAGCCCAGAGGCAGGACTTCGCAGCAGG...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| 3UTR CAA 72 bp | AGGGCTGGAGCAAATGTCCCAATTCCAGTGAAGGCTTaGGAGAGTCAGGAGGCCAGCAGCTGGACCTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGANVPIPVKA*ESQEASSWTYE Trigger: CTCATAGGTCCAGCTGCTGGCCTCCTGACTCTCCAAAGCCTTCACTGGAATTGGGACATTTGCTCCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGACAGCAGCTGGACCTATaGGTGGCCTCTCTAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGQQLDL*VASLDS Trigger: AGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGCTG...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGCCACCGGCTGCCAGATaGGGCTGTAGTAGACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSCYYRAHNRTWLKARLLPPAAR*GCSRRR Trigger: TCGCCGTCTACTACAGCCTCATCTGGCAGCCGGTGG...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCGCCAGCCGGCGATGGTaGGAGTGTGAGGGGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HYFWCPPPFESFSLLKKSASRRW*ECEGRS Trigger: TGAACGCCCCTCACACTCCCACCATCGCCGGCTGGC...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAGGTGCAGCACGGTCCTaGGCAGCAAACCCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKGAARS*AANPQP Trigger: GGGCTGGGGGTTTGCTGCCCAGGACCGTGCTGCACC...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGCAGGAGGCCAGCAGCTaGACCTATGAGTGGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCYYRAHNRTWLKARLLQEASS*TYEWPL Trigger: GAGAGGCCACTCATAGGTCCAGCTGCTGGCCTCCTG...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGAGAGGGAAGGCAAAAGTaGTTGCCGGAACAAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGEGRQK*LPEQDN Trigger: GTTGTCTTGTTCCGGCAATCACTTTTGCCTTCCCTC...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR GCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAATCCACCCCATCCTGCTaGGAAGTCCTGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKSTPSC*EVLPLG Trigger: GCCCAGAGGCAGGACTTCGCAGCAGGATGGGGTGGA...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACCGGCTGGAGGGGGCCTaGCGGCCTGCAAGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNRLEGA*RPARTG Trigger: CCCAGTCCTTGCAGGCCGCCAGGCCCCCTCCAGCCG...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACGGGGCCAGCCGGCGATaGTGGGAGTGTGAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNGASRR*WECEGR Trigger: ACGCCCCTCACACTCCCACCATCGCCGGCTGGCCCC...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCCCCATATCCAGATACTaGGGGCTGCAACAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HYFWCPPPFESFSLLKKSPISRY*GLQQEA Trigger: GGCTTCTTGTTGCAGCCCTCAGTATCTGGATATGGG...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGCCTGCTGGTAGGCTGTaGCAGCTCAGTTGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCYYRAHNRTWLKARLLPAGRL*QLSCYY Trigger: ATAATAGCAACTGAGCTGTCACAGCCTACCAGCAGG...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAGGACCCACTTCTTGTTaGTCTTGGCCGCCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKGPTSC*SWPPSS Trigger: CGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCC...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCACTTCTTGTTGGTCTTaGCCGCCATCTTCGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYFWCPPPFESFSLLKKSTSCWS*PPSSPS Trigger: AGAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGT...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACAGACGGCGAGCACGATaGCGGCCAGCGACACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNRRRAR*RPATRR Trigger: TCTCCGTGTCGCTGGCCGCCATCGTGCTCGCCGTCT...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACCGGCGCAGAAGGGTTTaGTGCCGGGATCTCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNRRRRV*CRDLPT Trigger: GGTGGGGAGATCCCGGCACCAAACCCTTCTGCGCCG...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCGTGTTTGTGCCCTTCTaGCCAGGTGTACTTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HYFWCPPPFESFSLLKKSVFVPF*PGVLFG Trigger: CCCAAAAAGTACACCTGGCCAGAAGGGCACAAACAC...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCGCCCACAACAGGACATaGCTTAAAGCAAGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HYFWCPPPFESFSLLKKSAHNRT*LKARLL Trigger: CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGC...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAATGTCCCAATTCCAGTaGAGGCTTTGGAGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKMSQFQ*RLWRVR Trigger: CCTGACTCTCCAAAGCCTTCACTGGAATTGGGACAT...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | CAACAAGAAGCCTCTTTGGTGGGGGCACTAGGATGGAAAGAAGAGGGGATGAGTACCTTCCAGCCTTTCTaGTTCTGTAGAATAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQEASLVGALGWKEEGMSTFQPF*FCRITQ Trigger: TTGAGTTATTCTACAGAATCAGAAAGGCTGGAAGGT...ACTCATCCCCTCTTCTTTCCATCCTAGTGCCCCCACCAAAGAGGCTTCTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR GCA 90 bp | CACTACTTTTGGTGCCCTCCTCCTTTCGAGAGCTTCAGCTTACTTAAAAAGAGCCAGTTGCTATTATCGTaGCCACAACAGGACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HYFWCPPPFESFSLLKKSQLLLS*PQQDMA Trigger: AGCCATGTCCTGTTGTGGGCACGATAATAGCAACTG...GCTCTTTTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAAAGTAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACCGTAGGCGAACACGGTaGCGAGCCGGACCCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNRRRTR*RAGPTS Trigger: AGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACG...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| 3UTR CAA 72 bp | CGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTaGTCCTGTAAACTTGGATCAGAGCTAACTAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAHNRTWLKARL*SCKLGSELTRV Trigger: TACTCTAGTTAGCTCTGATCCAAGTTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACCGAATCGTGGTCCCTTaGCTGAAGATCTGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNRIVVP*LKIWLR Trigger: CCGCAGCCAGATCTTCAGCCAAGGGACCACGATTCG...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTATAGGCCAGAAAACTaGAGAGACAAACTGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCYYRAHNRTWLKARLLYRPEN*RDKLFQ Trigger: CTGAAACAGTTTGTCTCTCCAGTTTTCTGGCCTATA...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAAAATGGAATCCAAATTaGGGAAGTCTAGTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKKWNPN*GSLVLA Trigger: AGCAAGAACTAGACTTCCTCAATTTGGATTCCATTT...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CCA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAGTTTCAGGACTCAGGTaGGTAAGTTGTCTTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YYRAHNRTWLKARLLSCKVSGLR*VSCLLK Trigger: TTTTAAAAGACAACTTACCCACCTGAGTCCTGAAAC...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGATATACATAGAATTCTATGTGATTATAGCTTCTAGTGCATATGTCAACACAGGAGAAAGTGAGTaGTTTAAGAAGCCGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRIYIEFYVIIASSAYVNTGESE*FKKPCL Trigger: CAAACACGGCTTCTTAAATCACTCACTTTCTCCTGT...GTTGACATATGCACTAGAAGCTATAATCACATAGAATTCTATGTATATCCTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS CCA 90 bp | GCTGTCCGCAGGGGGCTCCGGAGGCGCCGGTCGCGCCGCCTGCAGTaGGGGAACGTCGCGCGGCGCCTCGCGGCGGGACGACCCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVRRGLRRRRSRRLQ*GNVARRLAAGRPSG Trigger: ACCACTGGGTCGTCCCGCCGCGAGGCGCCGCGCGACGTTCCCCCACTGCAGGCGGCGCGACCGGCGCCTCCGGAGCCCCCTGCGGACAGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS CCA 90 bp | GCGGGCTCTCCACCCCATCCTGCTGCGAAGTCCTGCCTCTGGGCTTaGGGAGAATGGTTCCCGGCGGCCCCCAGCGCGGAGGGCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGSPPHPAAKSCLWA*GEWFPAAPSAEGFN Trigger: GTTGAAGCCCTCCGCGCTGGGGGCCGCCGGGAACCATTCTCCCCAAGCCCAGAGGCAGGACTTCGCAGCAGGATGGGGTGGAGAGCCCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGGTCCTGCCTCTGGGCTaGGGGAGAATGGTTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPTAQGPGAARSWAANPQVLPLG*GRMVPG Trigger: GCCGGGAACCATTCTCCCCAAGCCCAGAGGCAGGAC...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS CCA 90 bp | GCACGATGGCGGCCAGCGACACGGAGAGCACGTAGGCGAACACGGTaGCGAGCCGGACCCACTTCTTGTTGGTCTTGGCCGCCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARWRPATRRARRRTR*RAGPTSCWSWPPSS Trigger: CGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACGTGCTCTCCGTGTCGCTGGCCGCCATCGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGCCAAATCGCCGGGCTTaGTCACTACAGGCTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPTAQGPGAARSWAANPQPNRRA*SLQAQE Trigger: TTCCTGAGCCTGTAGTGACAAAGCCCGGCGATTTGG...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS CCA 90 bp | CGTAGGCGAACACGGTGGCGAGCCGGACCCACTTCTTGTTGGTCTTaGCCGCCATCTTCGCCTTCTTGTCCCCGGTGTAGGTGGCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRTRWRAGPTSCWS*PPSSPSCPRCRWPA Trigger: AGCCGGCCACCTACACCGGGGACAAGAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGGCAAATAGCCCTTGCTaGACCCCTTCAGTCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPTAQGPGAARSWAANPQANSPC*TPSVSS Trigger: GCTACTGACTGAAGGGGTCAAGCAAGGGCTATTTGC...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS CCA 90 bp | AGAGCACGTAGGCGAACACGGTGGCGAGCCGGACCCACTTCTTGTTaGTCTTGGCCGCCATCTTCGCCTTCTTGTCCCCGGTGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RARRRTRWRAGPTSC*SWPPSSPSCPRCRW Trigger: CCACCTACACCGGGGACAAGAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACGTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGCTTAAAGCAAGGCTGTaGTCCTGTAAACTTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLAEDLAAGLPLRGQPALKARL*SCKLGS Trigger: TGATCCAAGTTTACAGGACAACAGCCTTGCTTTAAG...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | TCCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGCTGTGACAGCTCAGTaGCTATTATCGTGCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: SPYGSGPWCSTVLGSKPPAVTAQ*LLSCPQ Trigger: TTGTGGGCACGATAATAGCAACTGAGCTGTCACAGC...TGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | GGTCCCTTGGCTGAAGATCTGGCTGCGGGCCTCCCGCTCCGGGGCCAGCCGGCGGAAATGGAATCCAAATaGAGGAAGTCTAGTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: GPLAEDLAAGLPLRGQPAEMESK*RKSSSC Trigger: GCAAGAACTAGACTTCCTCAATTTGGATTCCATTTC...CGCCGGCTGGCCCCGGAGCGGGAGGCCCGCAGCCAGATCTTCAGCCAAGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | CCCCCTACGGCTCAGGGCCCTGGTGCAGCACGGTCCTGGGCAGCAAACCCCCAGACTACCCACACTCAATaGCCTAAAAGCAAATGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PPTAQGPGAARSWAANPQTTHTQ*PKSKWQ Trigger: CTGCCATTTGCTTTTAGGCAATTGAGTGTGGGTAGT...CTGGGGGTTTGCTGCCCAGGACCGTGCTGCACCAGGGCCCTGAGCCGTAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGAGCGAATCGTGGTCCCTaGGCTGAAGATCTGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGANRGP*AEDLAA Trigger: CGCAGCCAGATCTTCAGCCAAGGGACCACGATTCGC...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGACGGACCCACTTCTTGTaGGTCTTGGCCGCCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGRTHFL*VLAAIF Trigger: GAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCG...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGATTTAAGAAGCCGTGTTaGTGCCCTTCTGGCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGFKKPC*CPSGQV Trigger: CACCTGGCCAGAAGGGCACAAACACGGCTTCTTAAA...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAAAGCCGGACCCACTTCTaGTTGGTCTTGGCCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: YYRAHNRTWLKARLLSCKSRTHF*LVLAAI Trigger: GATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCT...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | CTCAGTTGCTATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGGCCACTGCAACTAGGTaGACGTACCTGAGCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: LSCYYRAHNRTWLKARLLATATR*TYLSST Trigger: AGTGGAGCTCAGGTACGTCAACCTAGTTGCAGTGGC...CAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATAGCAACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | TATTATCGTGCCCACAACAGGACATGGCTTAAAGCAAGGCTGTTGTCCTGTAAACACTTCTTGTTGGTCTaGGCCGCCATCTTCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: YYRAHNRTWLKARLLSCKHFLLV*AAIFAF Trigger: GAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGTG...TTTACAGGACAACAGCCTTGCTTTAAGCCATGTCCTGTTGTGGGCACGATAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGGACCTATGAGTGGCCTCTCTAGACTCTCTGATCCATCCCAAAGAGGAGAAACACTAAGGGATTaGATATCTCATCACTACCCA | + |
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Preference number: 5 (lower is better) Translates to: AAGPMSGLSRLSDPSQRGETLRD*ISHHYP Trigger: TGGGTAGTGATGAGATATCAAATCCCTTAGTGTTTC...TCCTCTTTGGGATGGATCAGAGAGTCTAGAGAGGCCACTCATAGGTCCAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS GCA 72 bp | TCTTCGCCTTCTTGTCCCCGGTGTAGGTGGCCGGCTTaGCCCGCTCGGCCGGGGCCGCGTCGCGCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSPSCPRCRWPA*PARPGPRRAPS Trigger: TGAAGGAGCGCGACGCGGCCCCGGCCGAGCGGGGCAAGCCGGCCACCTACACCGGGGACAAGAAGGCGAAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS CCA 72 bp | CGGCCAGCGACACGGAGAGCACGTAGGCGAACACGGTaGCGAGCCGGACCCACTTCTTGTTGGTCTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RPATRRARRRTR*RAGPTSCWSWP Trigger: CGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACGTGCTCTCCGTGTCGCTGGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS CCA 72 bp | AGGCGAACACGGTGGCGAGCCGGACCCACTTCTTGTTaGTCTTGGCCGCCATCTTCGCCTTCTTGTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RRTRWRAGPTSC*SWPPSSPSCPR Trigger: CCGGGGACAAGAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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| CDS CCA 72 bp | ACACGGTGGCGAGCCGGACCCACTTCTTGTTGGTCTTaGCCGCCATCTTCGCCTTCTTGTCCCCGGTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: TRWRAGPTSCWS*PPSSPSCPRCR Trigger: CCTACACCGGGGACAAGAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638170.2 |
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