Pregenerated sensors for INAFM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000257704Ensembl transcript IDs: ENST00000552360.4
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGGAAGAAGGCCGGACCAATCCAGAGACGGTGCATCCTCGGCGTaGAGCACAGAGCTCTCGAGGGCTGGCGATCCGGGTTGGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LGRRPDQSRDGASSA*STELSRAGDPGWGG Trigger: TCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACCGTCTCTGGATTGGTCCGGCCTTCTTCCTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR TCA 90 bp | GACAGAGCTCAGGATGGGATCTTCCTGATGGTGGAGGACCCGGCCTaGCCACAGAGTAGCTGCAAGAGGCAAGGCCCCGAGCTGACACCC | + |
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Preference number: 1 (lower is better) Translates to: DRAQDGIFLMVEDPA*PQSSCKRQGPELTP Trigger: GGGTGTCAGCTCGGGGCCTTGCCTCTTGCAGCTACTCTGTGGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR TCA 90 bp | CCACAGCAGGAGGGGCAGGAGACAGAGCTCAGGATGGGATCTTCCTaGTGGTGGAGGACCCGGCCTGACCACAGAGTAGCTGCAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PQQEGQETELRMGSS*WWRTRPDHRVAARG Trigger: GCCTCTTGCAGCTACTCTGTGGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCTCCTGCCCCTCCTGCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR GCA 90 bp | CTGAGCGATGTCATTAGGAAGAAGGCCGGACCAATCCAGAGACGGTaGATCCTCGGCGTGGAGCACAGAGCTCTCGAGGGCTGGCGATCC | + |
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Preference number: 1 (lower is better) Translates to: LSDVIRKKAGPIQRR*ILGVEHRALEGWRS Trigger: GGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACCGTCTCTGGATTGGTCCGGCCTTCTTCCTAATGACATCGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR CCA 90 bp | GGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATaGACACGGATTCAGGGAGGTGAAGAGGCAGATGGGCTGTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GQTQHEAAEAVVYCR*TRIQGGEEADGLWA Trigger: AGCCCACAGCCCATCTGCCTCTTCACCTCCCTGAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR-3UTR CCA 90 bp | AGACAGAGCTCAGGATGGGATCTTCCTGATGGTGGAGGACCCGGCCTGACCACAAGAGCTCTCGAGGGCTaGCGATCCGGGTTGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RQSSGWDLPDGGGPGLTTRALEG*RSGLGW Trigger: CCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCT...TGTGGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGGGGCAGGAGACAGAGCTCAGGATGGGATCTTCCTGATGGTGGAGGACCCAATCCAGAGACGGTaGATCCTCGGCGTGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: AGGAGDRAQDGIFLMVEDPIQRR*ILGVEH Trigger: GTGCTCCACGCCGAGGATGCACCGTCTCTGGATTGG...GTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCTCCTGCCCCTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR-3UTR TCA 90 bp | CACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGATTCAGGAGGATGGGATCTTCCTaGTGGTGGAGGACCCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: HSTRQPRLSFIADGHGFRRMGSS*WWRTRP Trigger: AGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCT...CCTGAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAGCTCAGGATGGGATCTTCCTGATGGTGGAGGACCCGGCCTGACCACACGGCTCCAGAGACGCTaGGCGATGTCATTAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RQSSGWDLPDGGGPGLTTRLQRR*AMSLGR Trigger: TCTTCCTAATGACATCGCTCAGCGTCTCTGGAGCCG...TGTGGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR-3UTR CCA 90 bp | CACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGATTCAGGAGACAGAGCTCAGGATaGGATCTTCCTGATGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: HSTRQPRLSFIADGHGFRRQSSG*DLPDGG Trigger: TCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCT...CCTGAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR CCA 72 bp | AGGCCGGACCAATCCAGAGACGGTGCATCCTCGGCGTaGAGCACAGAGCTCTCGAGGGCTGGCGATCCGGGT | + |
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Preference number: 3 (lower is better) Translates to: RPDQSRDGASSA*STELSRAGDPG Trigger: ACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACCGTCTCTGGATTGGTCCGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR TCA 72 bp | CAGGATGGGATCTTCCTGATGGTGGAGGACCCGGCCTaGCCACAGAGTAGCTGCAAGAGGCAAGGCCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: QDGIFLMVEDPA*PQSSCKRQGPE Trigger: CTCGGGGCCTTGCCTCTTGCAGCTACTCTGTGGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR TCA 72 bp | GAGGGGCAGGAGACAGAGCTCAGGATGGGATCTTCCTaGTGGTGGAGGACCCGGCCTGACCACAGAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: EGQETELRMGSS*WWRTRPDHRVA Trigger: AGCTACTCTGTGGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCTCCTGCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR GCA 72 bp | GTCATTAGGAAGAAGGCCGGACCAATCCAGAGACGGTaGATCCTCGGCGTGGAGCACAGAGCTCTCGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: VIRKKAGPIQRR*ILGVEHRALEG Trigger: GCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACCGTCTCTGGATTGGTCCGGCCTTCTTCCTAATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| 3UTR CCA 72 bp | CAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATaGACACGGATTCAGGGAGGTGAAGAGGCAGATGGG | + |
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Preference number: 3 (lower is better) Translates to: QHEAAEAVVYCR*TRIQGGEEADG Trigger: CCCATCTGCCTCTTCACCTCCCTGAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR TCA 90 bp | CCCCCTGGGCCCCCATTCCGCGGGATGACGGCTCCAGAGACGCTGAGCGATGTCAGGATGGGATCTTCCTaGTGGTGGAGGACCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PPGPPFRGMTAPETLSDVRMGSS*WWRTRP Trigger: AGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCT...GACATCGCTCAGCGTCTCTGGAGCCGTCATCCCGCGGAATGGGGGCCCAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | AGAGACGGTGCATCCTCGGCGTGGAGCACAGAGCTCTCGAGGGCTGGCGATCCGCGATCCGGGTTGGGGTaGAAGGGAGAGTTACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RDGASSAWSTELSRAGDPRSGLG*KGELPG Trigger: CCCGGGTAACTCTCCCTTCCACCCCAACCCGGATCG...CGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACCGTCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGGGCAGGAGACAGAGCTCAGGATGGGATCTTCCTGATGGTGGAGGACCGAGCTGACACCCCCTaGGCCCCCATTCCGCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: AGGAGDRAQDGIFLMVEDRADTP*APIPRD Trigger: ATCCCGCGGAATGGGGGCCCAGGGGGTGTCAGCTCG...GTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCTCCTGCCCCTCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR TCA 90 bp | AGGAGACAGAGCTCAGGATGGGATCTTCCTGATGGTGGAGGACCCGGCCTGACCGCGTGGGTACCCAGATaGGACCGTAGTACACGGCGA | + |
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Preference number: 4 (lower is better) Translates to: RRQSSGWDLPDGGGPGLTAWVPR*DRSTRR Trigger: TCGCCGTGTACTACGGTCTCATCTGGGTACCCACGC...GGTCAGGCCGGGTCCTCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR GCA 90 bp | CCCCCTGGGCCCCCATTCCGCGGGATGACGGCTCCAGAGACGCTGAGCGATGTCGAGGCTGTCGTTTATTaGAGATGGACACGGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: PPGPPFRGMTAPETLSDVEAVVY*RWTRIQ Trigger: CTGAATCCGTGTCCATCTGCAATAAACGACAGCCTC...GACATCGCTCAGCGTCTCTGGAGCCGTCATCCCGCGGAATGGGGGCCCAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | ACAGGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACCCCTCCGCGGCCTCTaGCGTCTCTCTGGGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGQTQHEAAEAVVYCRWTPLRGL*RLSGCL Trigger: CAGACACCCAGAGAGACGCCAGAGGCCGCGGAGGGG...TGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR TCA 90 bp | AGCGATGTCATTAGGAAGAAGGCCGGACCAATCCAGAGACGGTGCATCCTCGGCGTGGAGGACCCGGCCTaGCCACAGAGTAGCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SDVIRKKAGPIQRRCILGVEDPA*PQSSCK Trigger: CTTGCAGCTACTCTGTGGTCAGGCCGGGTCCTCCAC...GCCGAGGATGCACCGTCTCTGGATTGGTCCGGCCTTCTTCCTAATGACATCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | ACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGATGTCTCTCTGGGTGTCTaGCGGCTCGGACGGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TDTARGSRGCRLLQMDTDVSLGV*RLGRRS Trigger: TGACCGCCGTCCGAGCCGCCAGACACCCAGAGAGAC...ATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | ACAGGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACCTCTGGCGTCTCTCTaGGTGTCTGGCGGCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: TGQTQHEAAEAVVYCRWTPLASL*VSGGSD Trigger: GTCCGAGCCGCCAGACACCCAGAGAGACGCCAGAGG...TGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | ACAGGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACAAGAGCTCTCGAGGGCTaGCGATCCGGGTTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TGQTQHEAAEAVVYCRWTRALEG*RSGLGW Trigger: CCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCT...TGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | GACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGAGGTGCATCCTCGGCGTaGAGCACAGAGCTCTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: DRHSTRQPRLSFIADGHGGASSA*STELSR Trigger: CCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACC...TCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | ACAGGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACAGCTGGCGATCCGGGTTaGGGTGGAAGGGAGAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: TGQTQHEAAEAVVYCRWTAGDPG*GGRESY Trigger: GTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGC...TGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGATTCAGGGAGGTGAAGAGGCAGATGGGCTGTaGGCTCTGTGCTCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: EAAEAVVYCRWTRIQGGEEADGL*ALCSAS Trigger: GGATGCTGAGCACAGAGCCCACAGCCCATCTGCCTC...TTCACCTCCCTGAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR TCA 90 bp | ATGTCATTAGGAAGAAGGCCGGACCAATCCAGAGACGGTGCATCCTCGGCGTGGCGGCTCCAGAGACGCTaGGCGATGTCATTAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: MSLGRRPDQSRDGASSAWRLQRR*AMSLGR Trigger: TCTTCCTAATGACATCGCTCAGCGTCTCTGGAGCCG...CCACGCCGAGGATGCACCGTCTCTGGATTGGTCCGGCCTTCTTCCTAATGACAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR GCA 90 bp | TTTATTGCAGATGGACACGGATTCAGGGAGGTGAAGAGGCAGATGGGCTGTGGGCCAATCCAGAGACGGTaGATCCTCGGCGTGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FIADGHGFREVKRQMGCGPIQRR*ILGVEH Trigger: GTGCTCCACGCCGAGGATGCACCGTCTCTGGATTGG...CCCACAGCCCATCTGCCTCTTCACCTCCCTGAATCCGTGTCCATCTGCAATAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | AGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGATTCAGACAGAGCTCAGGATaGGATCTTCCTGATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RHSTRQPRLSFIADGHGFRQSSG*DLPDGG Trigger: TCCACCATCAGGAAGATCCCATCCTGAGCTCTGTCT...GAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CCA 90 bp | CAACAGGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGAGTCGTTTATTGCAGATaGACACGGATTCAGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: QQDRHSTRQPRLSFIADGVVYCR*TRIQGG Trigger: ACCTCCCTGAATCCGTGTCCATCTGCAATAAACGAC...TCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCCTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 90 bp | CACGCCCGGGCGGGCAGCACACGGAGGGGACGGCGCGCTGGGCTGTaGGCCGGCGGGTGCCGCGGGAGACCGCGTGGGTACCCAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: HARAGSTRRGRRAGL*AGGCRGRPRGYPDE Trigger: CTCATCTGGGTACCCACGCGGTCTCCCGCGGCACCCGCCGGCCCACAGCCCAGCGCGCCGTCCCCTCCGTGTGCTGCCCGCCCGGGCGTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS GCA 90 bp | GGCAGCACACGGAGGGGACGGCGCGCTGGGCTGTGGGCCGGCGGGTaGCGCGGGAGACCGCGTGGGTACCCAGATGAGACCGTAGTACAC | + |
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Preference number: 5 (lower is better) Translates to: GSTRRGRRAGLWAGG*RGRPRGYPDETVVH Trigger: GTGTACTACGGTCTCATCTGGGTACCCACGCGGTCTCCCGCGGCACCCGCCGGCCCACAGCCCAGCGCGCCGTCCCCTCCGTGTGCTGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS TCA 90 bp | GCTGTGGGCCGGCGGGTGCCGCGGGAGACCGCGTGGGTACCCAGATaGGACCGTAGTACACGGCGAGCAGCACGGCAGCTAGCGAGACGC | + |
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Preference number: 5 (lower is better) Translates to: AVGRRVPRETAWVPR*DRSTRRAARQLARR Trigger: GCGTCTCGCTAGCTGCCGTGCTGCTCGCCGTGTACTACGGTCTCATCTGGGTACCCACGCGGTCTCCCGCGGCACCCGCCGGCCCACAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 90 bp | AGAGTTACCCGGGTCTTCGCCCCTCCGCGGCCTCTGGCGTCTCTCTaGGTGTCTGGCGGCTCGGACGGCGGTCAGGGTCGCTGTAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: RVTRVFAPPRPLASL*VSGGSDGGQGRCSG Trigger: GCCGCTACAGCGACCCTGACCGCCGTCCGAGCCGCCAGACACCCAGAGAGACGCCAGAGGCCGCGGAGGGGCGAAGACCCGGGTAACTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 90 bp | GGGTGGAAGGGAGAGTTACCCGGGTCTTCGCCCCTCCGCGGCCTCTaGCGTCTCTCTGGGTGTCTGGCGGCTCGGACGGCGGTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GWKGELPGSSPLRGL*RLSGCLAARTAVRV Trigger: GACCCTGACCGCCGTCCGAGCCGCCAGACACCCAGAGAGACGCCAGAGGCCGCGGAGGGGCGAAGACCCGGGTAACTCTCCCTTCCACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 90 bp | TCCTCGGCGTGGAGCACAGAGCTCTCGAGGGCTGGCGATCCGGGTTaGGGTGGAAGGGAGAGTTACCCGGGTCTTCGCCCCTCCGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSAWSTELSRAGDPG*GGRESYPGLRPSAA Trigger: GGCCGCGGAGGGGCGAAGACCCGGGTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 90 bp | CAGAGACGGTGCATCCTCGGCGTGGAGCACAGAGCTCTCGAGGGCTaGCGATCCGGGTTGGGGTGGAAGGGAGAGTTACCCGGGTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: QRRCILGVEHRALEG*RSGLGWKGELPGSS Trigger: CGAAGACCCGGGTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCACCGTCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CAA 90 bp | AGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACACGGATTCAGGGAGGGCTGGCGATCCGGGTaGGGGTGGAAGGGAGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: STRQPRLSFIADGHGFREGWRSG*GWKGEL Trigger: TAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCC...CTCCCTGAATCCGTGTCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS-3UTR CAA 90 bp | CAACAGGACAGACACAGCACGAGGCAGCCGAGGCTGTCGTTTATTGCAGATGGACGAGGCTGTCGTTTATaGCAGATGGACACGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: QQDRHSTRQPRLSFIADGRGCRL*QMDTDS Trigger: TGAATCCGTGTCCATCTGCAATAAACGACAGCCTCG...TCCATCTGCAATAAACGACAGCCTCGGCTGCCTCGTGCTGTGTCTGTCCTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS GCA 72 bp | CGGAGGGGACGGCGCGCTGGGCTGTGGGCCGGCGGGTaGCGCGGGAGACCGCGTGGGTACCCAGATGAGACC | + |
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Preference number: 6 (lower is better) Translates to: RRGRRAGLWAGG*RGRPRGYPDET Trigger: GGTCTCATCTGGGTACCCACGCGGTCTCCCGCGGCACCCGCCGGCCCACAGCCCAGCGCGCCGTCCCCTCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 72 bp | CGGGTCTTCGCCCCTCCGCGGCCTCTGGCGTCTCTCTaGGTGTCTGGCGGCTCGGACGGCGGTCAGGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: RVFAPPRPLASL*VSGGSDGGQGR Trigger: GCGACCCTGACCGCCGTCCGAGCCGCCAGACACCCAGAGAGACGCCAGAGGCCGCGGAGGGGCGAAGACCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 72 bp | GGAGAGTTACCCGGGTCTTCGCCCCTCCGCGGCCTCTaGCGTCTCTCTGGGTGTCTGGCGGCTCGGACGGCG | + |
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Preference number: 6 (lower is better) Translates to: GELPGSSPLRGL*RLSGCLAARTA Trigger: CGCCGTCCGAGCCGCCAGACACCCAGAGAGACGCCAGAGGCCGCGGAGGGGCGAAGACCCGGGTAACTCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CAA 90 bp | ATCCTCGGCGTGGAGCACAGAGCTCTCGAGGGCTGGCGATCCGGGTaGGGGTGGAAGGGAGAGTTACCCGGGTCTTCGCCCCTCCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: ILGVEHRALEGWRSG*GWKGELPGSSPLRG Trigger: GCCGCGGAGGGGCGAAGACCCGGGTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS TCA 72 bp | CGGCGGGTGCCGCGGGAGACCGCGTGGGTACCCAGATaGGACCGTAGTACACGGCGAGCAGCACGGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: RRVPRETAWVPR*DRSTRRAARQL Trigger: TAGCTGCCGTGCTGCTCGCCGTGTACTACGGTCTCATCTGGGTACCCACGCGGTCTCCCGCGGCACCCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 72 bp | TGGAGCACAGAGCTCTCGAGGGCTGGCGATCCGGGTTaGGGTGGAAGGGAGAGTTACCCGGGTCTTCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WSTELSRAGDPG*GGRESYPGLRP Trigger: GGGGCGAAGACCCGGGTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CAA 72 bp | GTGGAGCACAGAGCTCTCGAGGGCTGGCGATCCGGGTaGGGGTGGAAGGGAGAGTTACCCGGGTCTTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: VEHRALEGWRSG*GWKGELPGSSP Trigger: GGGCGAAGACCCGGGTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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| CDS CCA 72 bp | TGCATCCTCGGCGTGGAGCACAGAGCTCTCGAGGGCTaGCGATCCGGGTTGGGGTGGAAGGGAGAGTTACCC | + |
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Preference number: 6 (lower is better) Translates to: CILGVEHRALEG*RSGLGWKGELP Trigger: GGGTAACTCTCCCTTCCACCCCAACCCGGATCGCCAGCCCTCGAGAGCTCTGTGCTCCACGCCGAGGATGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552360.4 |
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