RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IMPG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000081148

Ensembl transcript IDs: ENST00000193391.8

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGGAAATGCTAGGATAAGGGAGCCACCTTGGCGCGGGCGCACATaGGCATTAGCGCGCACACGCACACACACATACACGCACACACAC +
Preference number: 1 (lower is better)
Translates to: KGNARIREPPWRGRT*ALARTRTHTYTHTH
Trigger: GTGTGTGTGCGTGTATGTGTGTGTGCGTGTGCGCGCTAATGCGCATGTGCGCCCGCGCCAAGGTGGCTCCCTTATCCTAGCATTTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR TCA 90 bp AAGTTGTATTCCTCAACTGAGGCCTCCTGTTCTTTCCCTGATAGTTaGGGGGCTCCTTTACTCTTCCATTTCATTGGTGTGGAGCAGACA +
Preference number: 1 (lower is better)
Translates to: KLYSSTEASCSFPDS*GAPLLFHFIGVEQT
Trigger: TGTCTGCTCCACACCAATGAAATGGAAGAGTAAAGGAGCCCCTCAACTATCAGGGAAAGAACAGGAGGCCTCAGTTGAGGAATACAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 90 bp TCAGAGATGGTGACGTGTGTCAGAATTCCCAAATTCCCACTTCACTaGTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCTCAGTTCGT +
Preference number: 1 (lower is better)
Translates to: SEMVTCVRIPKFPLH*LVCGKQQPSSGSVR
Trigger: ACGAACTGAGCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGGAATTCTGACACACGTCACCATCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR TCA 90 bp AGTCCAGCAATCAAGAAACAAAATATATTCTCAGCACTGGGGTCTTaGCCCGACACTCACTCCCTCCCTGCCCATGTGATTAAATTTGTC +
Preference number: 1 (lower is better)
Translates to: SPAIKKQNIFSALGS*PDTHSLPAHVIKFV
Trigger: GACAAATTTAATCACATGGGCAGGGAGGGAGTGAGTGTCGGGTCAAGACCCCAGTGCTGAGAATATATTTTGTTTCTTGATTGCTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 90 bp AAATACCTGGCCATCTTCAAGGCTTTCACTAGCTTTACTGTGGCATaGACTGAGCCCAGATATTTAGTTTCCGGTGTCCTCATAATGAGC +
Preference number: 1 (lower is better)
Translates to: KYLAIFKAFTSFTVA*TEPRYLVSGVLIMS
Trigger: GCTCATTATGAGGACACCGGAAACTAAATATCTGGGCTCAGTGCATGCCACAGTAAAGCTAGTGAAAGCCTTGAAGATGGCCAGGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 90 bp GCTAGGATCTTGACTCACTGCAGCTGGATTGTAAATGAGGAAGGCTaGCCCCACCCATTCCTACTGGGAATTGTTAGAAATGTTTTAGAA +
Preference number: 1 (lower is better)
Translates to: ARILTHCSWIVNEEG*PHPFLLGIVRNVLE
Trigger: TTCTAAAACATTTCTAACAATTCCCAGTAGGAATGGGTGGGGCCAGCCTTCCTCATTTACAATCCAGCTGCAGTGAGTCAAGATCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 90 bp ATAGCTCCTTTAGTGCTTTGCTTTGTACATGAGTGGATGGATCTTTaGTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGGTTCAGCT +
Preference number: 1 (lower is better)
Translates to: IAPLVLCFVHEWMDL*WANCVLQPFNSGSA
Trigger: AGCTGAACCACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCATGTACAAAGCAAAGCACTAAAGGAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 90 bp GATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTaGTTCAGCTATAGCAAAGGCAGGACAAAAGTTGTATTCCTCAAC +
Preference number: 1 (lower is better)
Translates to: DGSLLGKLCSSTFQQ*FSYSKGRTKVVFLN
Trigger: GTTGAGGAATACAACTTTTGTCCTGCCTTTGCTATAGCTGAACCACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 90 bp GCTCCTTTAGTGCTTTGCTTTGTACATGAGTGGATGGATCTTTGCTaGGCAAACTGTGTTCTTCAACCTTTCAACAGTGGTTCAGCTATA +
Preference number: 1 (lower is better)
Translates to: APLVLCFVHEWMDLC*ANCVLQPFNSGSAI
Trigger: TATAGCTGAACCACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCATGTACAAAGCAAAGCACTAAAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 90 bp ATACACACACACAACCTGTTATCCATACATACTTTGCAAAATACCTaGCCATCTTCAAGGCTTTCACTAGCTTTACTGTGGCATGCACTG +
Preference number: 1 (lower is better)
Translates to: IHTHNLLSIHTLQNT*PSSRLSLALLWHAL
Trigger: CAGTGCATGCCACAGTAAAGCTAGTGAAAGCCTTGAAGATGGCCAGGTATTTTGCAAAGTATGTATGGATAACAGGTTGTGTGTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 90 bp TCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAATaGAATGGATTTGAGAATAGTGACCGTCACATCATTTTTCTGCAT +
Preference number: 1 (lower is better)
Translates to: SHISTFRQDILCGIQ*NGFENSDRHIIFLH
Trigger: ATGCAGAAAAATGATGTGACGGTCACTATTCTCAAATCCATTGCATTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 90 bp TCATACTTCAGCCAACCTACTTTTAGAGCCTACAAAGAATATTTGTaGAGTTTCCAGCTTTTTGTTAGAGGTAATATTAAGTCAGAGTTG +
Preference number: 1 (lower is better)
Translates to: SYFSQPTFRAYKEYL*SFQLFVRGNIKSEL
Trigger: CAACTCTGACTTAATATTACCTCTAACAAAAAGCTGGAAACTGCACAAATATTCTTTGTAGGCTCTAAAAGTAGGTTGGCTGAAGTATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCATAAGGGAGCCACCTTaGCGCGGGCGCACATGCGCA +
Preference number: 2 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSIREPP*RGRTCA
Trigger: TGCGCATGTGCGCCCGCGCCAAGGTGGCTCCCTTAT...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CAA 90 bp GGTGACGTGTGTCAGAATTCCCAAATTCCCACTTCACTGCTTAGTTaGTGGAAAACAACAACCCTCCTCTGGCTCAGTTCGTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: GDVCQNSQIPTSLLS*WKTTTLLWLSSCFS
Trigger: GGAGAAGCACGAACTGAGCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGGAATTCTGACACACGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCTCAGCACTGGGGTCTTaGCCCGACACTCACTCCCTC +
Preference number: 2 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSSALGS*PDTHSL
Trigger: GAGGGAGTGAGTGTCGGGTCAAGACCCCAGTGCTGA...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCCAGCTGGATTGTAAATaGGGAAGGCTGGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSQLDCK*GRLAPP
Trigger: GGGTGGGGCCAGCCTTCCTCATTTACAATCCAGCTG...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAAGGAGACACCCCCAGTaGTTCAGAAGCAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSRRHPQ*FRSRQQ
Trigger: TTGCTGTCTGCTTCTGAATCACTGGGGGTGTCTCCT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAATCTTTCCCTGATAGTTaGGGGGCTCCTTTACTCTTC +
Preference number: 2 (lower is better)
Translates to: MVPSHISTFRQDILCGIQSFPDS*GAPLLF
Trigger: GAAGAGTAAAGGAGCCCCTCAACTATCAGGGAAAGA...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTTGTTTTGCTCTTGCATaGAAAGGTCACGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSCFALA*KGHAKG
Trigger: TCCTTTTGCGTGACCTTTTCATGCAAGAGCAAAACA...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGTACTGTGGCATGCACTaGGCCCAGATATTTAGTTTC +
Preference number: 2 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVYCGMH*AQIFSF
Trigger: GAAACTAAATATCTGGGCTCAGTGCATGCCACAGTA...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAAGCCAGACTTCTCCATaGAAGAGTCTCACCTTATTT +
Preference number: 2 (lower is better)
Translates to: MVPSHISTFRQDILCGIQSQTSP*KSLTLF
Trigger: AAATAAGGTGAGACTCTTCCATGGAGAAGTCTGGCT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCAAGTGTTCTGCATGGTaGCCTGCCCTAGAGGGATTT +
Preference number: 2 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPKCSAW*PALEGF
Trigger: AAATCCCTCTAGGGCAGGTCACCATGCAGAACACTT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTAAACCATTGCAATGGTaGAAATGGAGCCCTATTTAT +
Preference number: 2 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSKPLQW*KWSPIY
Trigger: ATAAATAGGGCTCCATTTTCACCATTGCAATGGTTT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTATGATGATGATGATTTaGCCTCCTCCTCTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: KREQTPLNHCNGENGALFMMMMI*PPPLPL
Trigger: GAGGGGGAGAGGAGGAGGCCAAATCATCATCATCAT...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGTCACTAGCTTTACTGTaGCATGCACTGAGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLSLALL*HALSPD
Trigger: ATCTGGGCTCAGTGCATGCCACAGTAAAGCTAGTGA...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTCAATTCTTTACATCATaGTACCCTCCCATATTTCCA +
Preference number: 2 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSQFFTS*YPPIFP
Trigger: TGGAAATATGGGAGGGTACCATGATGTAAAGAATTG...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGTTCAAATGGGCCCAGTaGAAAGTGTCTAATTATCCA +
Preference number: 2 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVFKWAQ*KVSNYP
Trigger: TGGATAATTAGACACTTTCCACTGGGCCCATTTGAA...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR GCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTAAGCTTTACTGTGGCATaGACTGAGCCCAGATATTTA +
Preference number: 2 (lower is better)
Translates to: HKREQTPLNHCNGENGALSFTVA*TEPRYL
Trigger: TAAATATCTGGGCTCAGTGCATGCCACAGTAAAGCT...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTGTACATGAGTGGATaGATCTTTGCTGGGCAAACT +
Preference number: 2 (lower is better)
Translates to: HKREQTPLNHCNGENGALLYMSG*IFAGQT
Trigger: AGTTTGCCCAGCAAAGATCCATCCACTCATGTACAA...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CAA 90 bp CCACCTTCCGCCAGGATATCCTTTGTGGAATACAATGCAATGGATTaGAGAATAGTGACCGTCACATCATTTTTCTGCATTTATTACACA +
Preference number: 2 (lower is better)
Translates to: PPSARISFVEYNAMD*RIVTVTSFFCIYYT
Trigger: TGTGTAATAAATGCAGAAAAATGATGTGACGGTCACTATTCTCAAATCCATTGCATTGTATTCCACAAAGGATATCCTGGCGGAAGGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCCCCTCCCTGCCCATGTaGTTAAATTTGTCTTTAGAT +
Preference number: 2 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPPSLPM*LNLSLD
Trigger: ATCTAAAGACAAATTTAATCACATGGGCAGGGAGGG...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR TCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTAAGAGGATCCATTATGTaGGTAGGGAATGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: HKREQTPLNHCNGENGALRGSIM*VGNERK
Trigger: TTTCCTTTCATTCCCTACTCACATAATGGATCCTCT...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTAACTTTGCAAAATACCTaGCCATCTTCAAGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: HKREQTPLNHCNGENGALTLQNT*PSSRLS
Trigger: TGAAAGCCTTGAAGATGGCCAGGTATTTTGCAAAGT...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTTCAACCTTTCAACAGTaGTTCAGCTATAGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: KREQTPLNHCNGENGALFSTFQQ*FSYSKG
Trigger: GCCTTTGCTATAGCTGAACCACTGTTGAAAGGTTGA...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR GCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTAAAATTCCCACTTCACTaGTTAGTTTGTGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: HKREQTPLNHCNGENGALKFPLH*LVCGKQ
Trigger: TTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTT...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCAATTACTTTTCAAATaGGCCCAGTGGAAAGTGTCT +
Preference number: 2 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKQLLFK*AQWKVS
Trigger: AGACACTTTCCACTGGGCCCATTTGAAAAGTAATTG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 72 bp GGAATGAAAGGAAATGCTAGGATAAGGGAGCCACCTTaGCGCGGGCGCACATGCGCATTAGCGCGCACACGC +
Preference number: 3 (lower is better)
Translates to: GMKGNARIREPP*RGRTCALARTR
Trigger: GCGTGTGCGCGCTAATGCGCATGTGCGCCCGCGCCAAGGTGGCTCCCTTATCCTAGCATTTCCTTTCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTCCCAGGAGGCAGAGGTaGCCAGGAGCTGAGATCGCC +
Preference number: 3 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSPRRQR*PGAEIA
Trigger: GGCGATCTCAGCTCCTGGCAACCTCTGCCTCCTGGG...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCGATAAGGGAGCCACCTaGGCGCGGGCGCACATGCGC +
Preference number: 3 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPDKGAT*ARAHMR
Trigger: GCGCATGTGCGCCCGCGCCAAGGTGGCTCCCTTATC...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAAAGCACGAGAATCGCTaGAACCCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: MVPSHISTFRQDILCGIQKHENR*NPGGRG
Trigger: ACCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCTT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCCTCAGCACTGGGGTCTaGACCCGACACTCACTCCCT +
Preference number: 3 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPLSTGV*TRHSLP
Trigger: AGGGAGTGAGTGTCGGGTCAAGACCCCAGTGCTGAG...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 72 bp GTGACGTGTGTCAGAATTCCCAAATTCCCACTTCACTaGTTAGTTTGTGGAAAACAACAACCCTCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: VTCVRIPKFPLH*LVCGKQQPSSG
Trigger: GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGGAATTCTGACACACGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 72 bp TTGACTCACTGCAGCTGGATTGTAAATGAGGAAGGCTaGCCCCACCCATTCCTACTGGGAATTGTTAGAAAT +
Preference number: 3 (lower is better)
Translates to: LTHCSWIVNEEG*PHPFLLGIVRN
Trigger: ATTTCTAACAATTCCCAGTAGGAATGGGTGGGGCCAGCCTTCCTCATTTACAATCCAGCTGCAGTGAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAGAGGAGAGACAGGATTaGCCCAAGACATCTTTAGAT +
Preference number: 3 (lower is better)
Translates to: MVPSHISTFRQDILCGIQEERQD*PKTSLD
Trigger: ATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTC...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTGAAGAGCTAAGTGTTTaGCTCTTGCATGAAAAGGTC +
Preference number: 3 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSEELSV*LLHEKV
Trigger: GACCTTTTCATGCAAGAGCAAAACACTTAGCTCTTC...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAACACCTTATTTTCCTATaGAAAAACCCGAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: MVPSHISTFRQDILCGIQHLIFL*KNPRHS
Trigger: ACTGTGCCTCGGGTTTTTCAATAGGAAAATAAGGTG...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAATACTCTTCCATTTCATaGGTGTGGAGCAGACATTCA +
Preference number: 3 (lower is better)
Translates to: MVPSHISTFRQDILCGIQYSSIS*VWSRHS
Trigger: TGAATGTCTGCTCCACACCAATGAAATGGAAGAGTA...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 72 bp GTGCTTTGCTTTGTACATGAGTGGATGGATCTTTGCTaGGCAAACTGTGTTCTTCAACCTTTCAACAGTGGT +
Preference number: 3 (lower is better)
Translates to: VLCFVHEWMDLC*ANCVLQPFNSG
Trigger: ACCACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCATGTACAAAGCAAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTAAGCTTTGCCCTGTTTaGTATAAGCAGGAGTTAATT +
Preference number: 3 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSKLCPV*YKQELI
Trigger: AATTAACTCCTGCTTATACAAAACAGGGCAAAGCTT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CCA 72 bp TTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTaGTTCAGCTATAGCAAAGGCAGGACAAAAGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLGKLCSSTFQQ*FSYSKGRTKVV
Trigger: TACAACTTTTGTCCTGCCTTTGCTATAGCTGAACCACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTACTAAGTGTTTTGCTCTaGCATGAAAAGGTCACGCAA +
Preference number: 3 (lower is better)
Translates to: HKREQTPLNHCNGENGALLSVLL*HEKVTQ
Trigger: TTGCGTGACCTTTTCATGCAAGAGCAAAACACTTAG...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR-3UTR CAA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCTACAATGCAATGGATTaGAGAATAGTGACCGTCACA +
Preference number: 3 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSYNAMD*RIVTVT
Trigger: TGTGACGGTCACTATTCTCAAATCCATTGCATTGTA...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR TCA 72 bp CTCAGAAAATTTCATTCCTCAATTGTGCAGTGTAAATaGCAGTTCAGCCTAAGACTTTTAAATGATGACATG +
Preference number: 3 (lower is better)
Translates to: LRKFHSSIVQCK*QFSLRLLNDDM
Trigger: CATGTCATCATTTAAAAGTCTTAGGCTGAACTGTCATTTACACTGCACAATTGAGGAATGAAATTTTCTGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR GCA 72 bp AGCCAACCTACTTTTAGAGCCTACAAAGAATATTTGTaGAGTTTCCAGCTTTTTGTTAGAGGTAATATTAAG +
Preference number: 3 (lower is better)
Translates to: SQPTFRAYKEYL*SFQLFVRGNIK
Trigger: CTTAATATTACCTCTAACAAAAAGCTGGAAACTGCACAAATATTCTTTGTAGGCTCTAAAAGTAGGTTGGCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGTGGCGCGGGCGCACATaGGCATTAGCGCGCACACGC +
Preference number: 4 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVWRGRT*ALARTR
Trigger: GCGTGTGCGCGCTAATGCGCATGTGCGCCCGCGCCA...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAACAGGCAAGCCAGTCTaGAGCACTGCCGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQTGKPV*STAGVT
Trigger: TGTCACCCCGGCAGTGCTTCAGACTGGCTTGCCTGT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGCCAGGAGGCAGAGGTTaGCAGGAGCTGAGATCGCCC +
Preference number: 4 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVPGGRG*QELRSP
Trigger: GGGCGATCTCAGCTCCTGGCAACCTCTGCCTCCTGG...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTGAAGCACTGCCGGGGTaGCAGAATGAAGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSEALPG*QNEESS
Trigger: GCTTGACTCTTCATTCTGTCACCCCGGCAGTGCTTC...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTAGCACGAGAATCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSSTRIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTTCAAGGTGCTGGTGGTaGAAGCTGGAGGAATCCTGT +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSSRCWW*KLEESC
Trigger: ACAGGATTCCTCCAGCTTTCACCACCAGCACCTTGA...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCATTCCCTGCCAGTGGCTaGGGGAGGACCAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSFPASG*GRTRAE
Trigger: TTCAGCTCTGGTCCTCCCTCAGCCACTGGCAGGGAA...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCACCTCTGGGGAAGAGCTaGGGCCCATCTTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSPLGKS*GPSSRE
Trigger: TTCCCTCGAAGATGGGCCTCAGCTCTTCCCCAGAGG...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTTTCAGCTGCAGTATCTaGGAAGATGGGCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSFSCSI*EDGHSR
Trigger: CCTGCTGTGCCCATCTTCGCAGATACTGCAGCTGAA...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCGTTGTATTCCTCAACTaGGGCCTCCTGTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGVVFLN*GLLFFP
Trigger: GGGAAAGAACAGGAGGCCTCAGTTGAGGAATACAAC...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCACAGCTGGATTGTAAATaGGGAAGGCTGGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSQLDCK*GRLAPP
Trigger: GGGTGGGGCCAGCCTTCCTCATTTACAATCCAGCTG...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTACAAATTCCTCACAGTaGTTGCCTCGGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSTNSSQ*LPRYHQ
Trigger: CTGGTGGTACCGAGGCAAGCACTGTGAGGAATTTGT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTATAGGCGTCCACCTCTaGATGTGGAACACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSIGVHL*MWNTES
Trigger: ACTCTCAGTGTTCCACATCCAGAGGTGGACGCCTAT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTCTTCTGATATGTGCTTaGGGAGGGTTAGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSLLICA*GGLETQ
Trigger: CTGCGTCTCTAACCCTCCCCAAGCACATATCAGAAG...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCATAAGGGAGCCACCTTaGCGCGGGCGCACATGCGCA +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPIREPP*RGRTCA
Trigger: TGCGCATGTGCGCCCGCGCCAAGGTGGCTCCCTTAT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAGCCGGGGTGACAGAATaGAGAGTCAAGCTGCTAACC +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSAGVTE*RVKLLT
Trigger: GGTTAGCAGCTTGACTCTTCATTCTGTCACCCCGGC...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGTCACATCCAGCCCTGTaGCTTTCATACACGGGGTTG +
Preference number: 4 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVSHPAL*LSYTGL
Trigger: CAACCCCGTGTATGAAAGTCACAGGGCTGGATGTGA...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTTCAGCACTGGGGTCTTaGCCCGACACTCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFSALGS*PDTHSL
Trigger: GAGGGAGTGAGTGTCGGGTCAAGACCCCAGTGCTGA...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCGGTACTTCTGATATGTaGTTGGGGAGGGTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGGTSDM*LGRVRD
Trigger: GTCTCTAACCCTCCCCAAGCACATATCAGAAGTACC...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCCCTGTCAGCACTCTGTaGTGTACTTGCCAATATGTC +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGPVSTL*CTCQYV
Trigger: GACATATTGGCAAGTACACCACAGAGTGCTGACAGG...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCATTCCAAGCTGCTCTCTaGGGCACCTTCATAGGCGTC +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSFQAAL*GTFIGV
Trigger: GACGCCTATGAAGGTGCCTCAGAGAGCAGCTTGGAA...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGAGTTCTGGAACCCCGTaGGATTTGACTGGAGATAGG +
Preference number: 4 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVSSGTP*DLTGDR
Trigger: CCTATCTCCAGTCAAATCTCACGGGGTTCCAGAACT...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTGTTGGCTTCATCACCTaGTTCCACATCAAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSVGFIT*FHIKRV
Trigger: TACTCTCTTGATGTGGAATCAGGTGATGAAGCCAAC...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCAATTCATTACAGGCCTaGAACTTGCAAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGNSLQA*NLQGLA
Trigger: AGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCAGGTCACAGAGACTCTaGCAGGGCCGTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSRSQRL*QGRSST
Trigger: TGTGGAAGAACGGCCCTGTCAGAGTCTCTGTGACCT...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCACTGAGGTCAGGAGTTTaGGACCAGGCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSLRSGV*DQAGQH
Trigger: ATGTTGGCCAGCCTGGTCTCAAACTCCTGACCTCAG...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCAGACGCAGATTCAGCTaGAGTATCTGCGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTRRRFS*SICEDG
Trigger: CCCATCTTCGCAGATACTGCAGCTGAATCTGCGTCT...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCGAGTGGATGGATCTTTaGTGGGCAAACTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGEWMDL*WANCVL
Trigger: AAGAACACAGTTTGCCCAGCAAAGATCCATCCACTC...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAACAGGGAATCAGGATCTaGATTCAAGGAAGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQQGIRI*IQGRVP
Trigger: GGGAACTCTTCCTTGAATCCAGATCCTGATTCCCTG...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAAGATCTTCAGTTTGGTaGCGCAAAACTCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQRSSVW*RKTPLT
Trigger: TGTGAGAGGAGTTTTGCGTCACCAAACTGAAGATCT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGGATGACGGCGTTGCCTaGAGACTTGAACTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLDDGVA*RLELWV
Trigger: CACCCAAAGTTCAAGTCTTCAGGCAACGCCGTCATC...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAATTGGCACAGGTTGAGTaGATGAACTTGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQLAQVE*MNLKAM
Trigger: CATTGCCTTCAAGTTCATTCACTCAACCTGTGCCAA...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGGCCTGCTGGAGCCACTaGAGGGACTCTCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWACWSH*RDSLFH
Trigger: GTGAAAGAGAGAGTCCCTTCAGTGGCTCCAGCAGGC...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCAGGAGACACCCCCAGTaGTTCAGAAGCAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSRRHPQ*FRSRQQ
Trigger: TTGCTGTCTGCTTCTGAATCACTGGGGGTGTCTCCT...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGCTGGCCTTTCCAAGCTaGTCTCTGAGGCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLLAFPS*SLRHLH
Trigger: ATGAAGGTGCCTCAGAGAGCAGCTTGGAAAGGCCAG...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCGCCAGTCTGAAGCACTaGCGGGGTGACAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPASLKH*RGDRMK
Trigger: CTTCATTCTGTCACCCCGGCAGTGCTTCAGACTGGC...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTATCAGATCTACCTTTTaGCCAGACCCTGAACCTAAA +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSIRSTF*PDPEPK
Trigger: TTTAGGTTCAGGGTCTGGGCAAAAGGTAGATCTGAT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAATTCCTCACAGTGCTTaGCTCGGTACCACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSIPHSA*LGTTSS
Trigger: AGAACTGGTGGTACCGAGGCAAGCACTGTGAGGAAT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCATTCTGCATGGTGACCTaGCCTAGAGGGATTTGTGTC +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSFCMVT*PRGICV
Trigger: GACACAAATCCCTCTAGGGCAGGTCACCATGCAGAA...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCAGGATCTTGACTCACTaGAGCTGGATTGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGRILTH*SWIVNE
Trigger: CTCATTTACAATCCAGCTGCAGTGAGTCAAGATCCT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAGTCCACCTCTGGATGTaGAACACTGAGAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSVHLWM*NTESSV
Trigger: GACACTACTCTCAGTGTTCCACATCCAGAGGTGGAC...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCCCTCTGGAAAGTGTGTaGATCTGTCATCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGPLESV*ICHHVH
Trigger: ATGAACATGATGACAGATCCACACACTTTCCAGAGG...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCGGTGGAGATTGTGGTTaGAGGCAATTTGGTAGACTG +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTGGDCG*RQFGRL
Trigger: CAGTCTACCAAATTGCCTCCAACCACAATCTCCACC...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCAGGATTTCTAAGTTCTaGAACCCCGTGAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGRISKF*NPVRFD
Trigger: GTCAAATCTCACGGGGTTCCAGAACTTAGAAATCCT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAGAAACTTGCAAGGGTTaGCTTCATCACCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQETCKG*LHHLIP
Trigger: TGGAATCAGGTGATGAAGCCAACCCTTGCAAGTTTC...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCACTTTCACTCCTGTCATaGTGTGCTTGGAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSLSLLS*CAWRVL
Trigger: CAGGACTCTCCAAGCACACCATGACAGGAGTGAAAG...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCCTTGAATTTCCTCTCTaGAAAGCTCACTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGLEFPL*KAHCSH
Trigger: ATGAGAGCAGTGAGCTTTCCAGAGAGGAAATTCAAG...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCACTAGCTTTACTGTaGCATGCACTGAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTSLALL*HALSPD
Trigger: ATCTGGGCTCAGTGCATGCCACAGTAAAGCTAGTGA...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGACAACAACCCTCCTCTaGCTCAGTTCGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLTTTLL*LSSCFS
Trigger: GGAGAAGCACGAACTGAGCCAGAGGAGGGTTGTTGT...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTTGGATGGATCTTTGCTaGGCAAACTGTGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSWMDLC*ANCVLQ
Trigger: TTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCA...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCAAAATTAGCTGGGCATaGTGGTGGGTGTCTGTAACC +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTKISWA*WWVSVT
Trigger: GGTTACAGACACCCACCACCATGCCCAGCTAATTTT...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCGTAAATGAGGAAGGCTaGCCCCACCCATTCCTACTG +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSVNEEG*PHPFLL
Trigger: CAGTAGGAATGGGTGGGGCCAGCCTTCCTCATTTAC...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCGTAGCTATAACTGTGTaGGCTGAGAGCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGVAITV*AESSVF
Trigger: AAAAACACTGCTCTCAGCCCACACAGTTATAGCTAC...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
3UTR CAA 72 bp TGTCAGAATTCCCAAATTCCCACTTCACTGCTTAGTTaGTGGAAAACAACAACCCTCCTCTGGCTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: CQNSQIPTSLLS*WKTTTLLWLSS
Trigger: CGAACTGAGCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGGAATTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCATCCCAGACAGCTTCCTaGCACACTCGGACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSSQTAS*HTRTLK
Trigger: TTTTAAAGTCCGAGTGTGTCAGGAAGCTGTCTGGGA...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGAGTGTCTCCCAATGTTaGAGTATCACCAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVSVSQC*SITNRN
Trigger: GTTCCTGTTGGTGATACTTCAACATTGGGAGACACT...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGGTGGAATACTGCTGGTaGTGGATTCATCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLVEYCW*WIHLLR
Trigger: CCTCAGCAGATGAATCCATCACCAGCAGTATTCCAC...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCCTTTTAATTGGTCTTTaGCTTTGGAGGTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGLLIGL*LWRSRS
Trigger: ACTCCTTGACCTCCAAAGTCAAAGACCAATTAAAAG...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCACTCCACTCCAGGGGTTaGCCAGACACTCTGAAAATT +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSLHSRG*PDTLKI
Trigger: AATTTTCAGAGTGTCTGGTCAACCCCTGGAGTGGAG...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCAGAGGATCCATTATGTaGGTAGGGAATGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGRGSIM*VGNERK
Trigger: TTTCCTTTCATTCCCTACTCACATAATGGATCCTCT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCAAGTGTTCTGCATGGTaGCCTGCCCTAGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSKCSAW*PALEGF
Trigger: AAATCCCTCTAGGGCAGGTCACCATGCAGAACACTT...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCAATAAGCTAGGATCTTaGCTCACTGCAGCTGGATTG +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTNKLGS*LTAAGL
Trigger: CAATCCAGCTGCAGTGAGTCAAGATCCTAGCTTATT...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTGCAATCTGTTCACCTaGTGGTTTTGTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTCNLFT*WFCGFF
Trigger: GAAGAAGCCACAAAACCAGCAGGTGAACAGATTGCA...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCGTGGATACTGAATTCTaGAATCTGTTCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTVDTEF*NLFTCW
Trigger: CCAGCAGGTGAACAGATTGCAGAATTCAGTATCCAC...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCACCATTGAAGGTAACTaGATAGTAAACATCTACGCC +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGTIEGN*IVNIYA
Trigger: GGCGTAGATGTTTACTATGCAGTTACCTTCAATGGT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAACTCCTGTCATGGTGTaGTTGGAGAGTCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSTPVMV*LESPDE
Trigger: TTCATCAGGACTCTCCAAGCACACCATGACAGGAGT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCTGCAACACTTTCATCTaGGCAGATTTTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGCNTFI*ADFHSI
Trigger: AATGGAGTGAAAATCTGCCCAGATGAAAGTGTTGCA...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGCATCCTCTAGCAGGGTaGAGATTGTGGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQHPLAG*RLWLEA
Trigger: TGCCTCCAACCACAATCTCCACCCTGCTAGAGGATG...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTACGTTGCCTGAAGACTTaGACTTTGGGTGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HKREQTPLNHCNGENGALRCLKT*TLGVPN
Trigger: GTTTGGAACACCCAAAGTTCAAGTCTTCAGGCAACG...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCACCATCTTCTACCAAGTaGGATCCAGAAGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSPSSTK*DPEVLS
Trigger: GGAAAGGACTTCTGGATCTCACTTGGTAGAAGATGG...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTCCATTCATAGTTGGATaGCTCAGTAATTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSPFIVG*LSNLFH
Trigger: ATGGAACAAATTACTGAGTCATCCAACTATGAATGG...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCGGAGTGAACACTTGTTaGCATTTCCACATAACTACC +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTGVNTC*HFHITT
Trigger: GGTAGTTATGTGGAAATGTCAACAAGTGTTCACTCC...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGGAACCCCGTGAGATTTaGCTGGAGATAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWEPREI*LEIGNQ
Trigger: CTGGTTCCCTATCTCCAGTCAAATCTCACGGGGTTC...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTGTTTTGCTCTTGCATaGAAAGGTCACGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTCFALA*KGHAKG
Trigger: TCCTTTTGCGTGACCTTTTCATGCAAGAGCAAAACA...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGTCTTTCCCTGATAGTTaGGGGGCTCCTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLSFPDS*GAPLLF
Trigger: GAAGAGTAAAGGAGCCCCTCAACTATCAGGGAAAGA...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCATACAGGCCTGAAACTTaGAAGGGTTGGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSYRPET*KGWLHH
Trigger: GTGATGAAGCCAACCCTTGCAAGTTTCAGGCCTGTA...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTGCTTCCCCAAAAGGTaGATACTGAATTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTCFPKR*ILNSAI
Trigger: GATTGCAGAATTCAGTATCCACCTTTTGGGGAAGCA...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGCTGGTGGTGAAAGCTaGAGGAATCCTGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSAGGES*RNPVVL
Trigger: AAGAACTACAGGATTCCTCCAGCTTTCACCACCAGC...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTCCATGGATGCATCTaGCAGGAAAGGGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: HKREQTPLNHCNGENGALFHGCI*QERAHF
Trigger: AAAGTGAGCCCTTTCCTGCCAGATGCATCCATGGAA...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCTTCAAGCCACGGCTTaGACAGTGGTTCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKLQATA*TVVQRS
Trigger: AGAGCGCTGAACCACTGTCCAAGCCGTGGCTTGAAG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAGGATTTGTGTCCATCTaGAATTCTTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSGFVSI*NSSSKH
Trigger: GTGCTTGCTGGAAGAATTCCAGATGGACACAAATCC...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAACTCTTCCATTTCATTaGTGTGGAGCAGACATTCAT +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQTLPFH*CGADIH
Trigger: ATGAATGTCTGCTCCACACCAATGAAATGGAAGAGT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCATTGACTCACTGCAGCTaGATTGTAAATGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSLTHCS*IVNEEG
Trigger: GCCTTCCTCATTTACAATCCAGCTGCAGTGAGTCAA...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAGACAGAATCCTTAATTaGGTGTCCAAATCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQDRILN*VSKSLK
Trigger: TTTCAAGGATTTGGACACTCAATTAAGGATTCTGTC...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGTCCACCTTGTTGGAGTaGAGGCTAATGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKSTLLE*RLMRSQ
Trigger: CTGGGACCTCATTAGCCTTCACTCCAACAAGGTGGA...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAATTATCCAGAATAGATaGCGGCGTTGCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSIIQNR*RRCLKT
Trigger: AGTCTTCAGGCAACGCCGTCATCTATTCTGGATAAT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCTCTTTTGGCACAGGTTaGGTGAATGAACTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSSFGTG*VNELEG
Trigger: GCCTTCAAGTTCATTCACTCAACCTGTGCCAAAAGA...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGCTCAGCTGGCAAAAGTaGATCATCATCTTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLLSWQK*IIIFKP
Trigger: TGGCTTGAAGATGATGATTCACTTTTGCCAGCTGAG...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGAACACCAGGTACTTCTaGTATGTGCTTGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWNTRYF*YVLGEG
Trigger: ACCCTCCCCAAGCACATATCAGAAGTACCTGGTGTT...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAAGGTGCTTTGGTAACTaGGTAATCATCAACACCAGG +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSRCFGN*VIINTR
Trigger: CCTGGTGTTGATGATTACTCAGTTACCAAAGCACCT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCGGCATCTGCCTGATCTaGTTTATCAGTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPGICLI*FISRGR
Trigger: TCTGCCTCTACTGATAAATCAGATCAGGCAGATGCC...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAAAACCATTGCAATGGTaGAAATGGAGCCCTATTTAT +
Preference number: 4 (lower is better)
Translates to: MVPSHISTFRQDILCGIQKPLQW*KWSPIY
Trigger: ATAAATAGGGCTCCATTTTCACCATTGCAATGGTTT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAATACTTCACATGATTTaGCACAGCCTCTGCAACACT +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSILHMI*HSLCNT
Trigger: AGTGTTGCAGAGGCTGTGGCAAATCATGTGAAGTAT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCCTCACATTGATAAGCTaGAGGGAATCAGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSLTLIS*RESGSG
Trigger: TCCAGATCCTGATTCCCTGCAGCTTATCAATGTGAG...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGCTGATAGTAATCTGTaGCTATCCGGTCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSADSNL*LSGPVL
Trigger: TAGAACTGGACCGGATAGGCACAGATTACTATCAGC...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCCATAACTACCAACCTTaGCATTTTGCTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTHNYQP*HFALGL
Trigger: AAGTCCAAGAGCAAAATGGCAAGGTTGGTAGTTATG...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCTACAAATGGCCCCGTaGCCAGGCATAATGTCACAC +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKLQMAP*PGIMSH
Trigger: GTGTGACATTATGCCTGGGCACGGGGCCATTTGTAG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGATCACCAACAGGAACTaGAGAAGACAGTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLITNRN*RRQFRA
Trigger: AGCTCTGAACTGTCTTCTCCAGTTCCTGTTGGTGAT...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCAGTTCCACAAGGCCATaGTTTTCCACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPSSTRP*FSTLLE
Trigger: CTCCAACAAGGTGGAAAACCATGGCCTTGTGGAACT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGAAGAGGCTCTTCCTCTaGAAAGTGTGTGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQKRLFL*KVCGSV
Trigger: GACAGATCCACACACTTTCCAGAGGAAGAGCCTCTT...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGCTGTCATGGTGTGCTTaGAGAGTCCTGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQLSWCA*RVLMKK
Trigger: CTTCTTCATCAGGACTCTCCAAGCACACCATGACAG...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAGAACAGGAGTTTTaGTTAAACCTCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTSEQEF*LNLFHL
Trigger: CAAGTGGAAGAGGTTTAACCAAAACTCCTGTTCTGA...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGATATATTCTCAGCACTaGGGTCTTGACCCGACACTC +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQIYSQH*GLDPTL
Trigger: GAGTGTCGGGTCAAGACCCCAGTGCTGAGAATATAT...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGATGATGATGATGATTTaGCCTCCTCCTCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWMMMMI*PPPLPL
Trigger: GAGGGGGAGAGGAGGAGGCCAAATCATCATCATCAT...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCACTTTGCAAAATACCTaGCCATCTTCAAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTTLQNT*PSSRLS
Trigger: TGAAAGCCTTGAAGATGGCCAGGTATTTTGCAAAGT...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGGATCCCAAAAAGTCCTaGAGGCTTCCCAGACAGCTT +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKDPKKS*RLPRQL
Trigger: AAGCTGTCTGGGAAGCCTTCAGGACTTTTTGGGATC...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTACCAAAAGGTGGATACTaGATTCTGCAATCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: HKREQTPLNHCNGENGALPKGGY*ILQSVH
Trigger: GTGAACAGATTGCAGAATTCAGTATCCACCTTTTGG...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGAGGGAGGACCAGAGCTaGAATCAAGTGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKREDQS*NQVVEY
Trigger: GTATTCCACCACTTGATTTCAGCTCTGGTCCTCCCT...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCTGTCCAAACTCTCTCTaGTTCTGGCAATATAGTCCA +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSCPNSL*FWQYSP
Trigger: TGGACTATATTGCCAGAATCAGAGAGAGTTTGGACA...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCGTTGACCAGACACTCTaGAAATTCATTACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPVDQTL*KFITGL
Trigger: CAGGCCTGTAATGAATTTTCAGAGTGTCTGGTCAAC...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAACTCTCATTCTCTCTTaGATTTCCTCTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSTLILS*ISSLES
Trigger: GCTTTCCAGAGAGGAAATTCAAGAGAGAATGAGAGT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTTACTGTGGCATGCACTaGGCCCAGATATTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFYCGMH*AQIFSF
Trigger: GAAACTAAATATCTGGGCTCAGTGCATGCCACAGTA...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCCAACCTTGCCATTTTaGTCTTGGACTTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKPTLPF*SWTCSG
Trigger: GCCTGAGCAAGTCCAAGAGCAAAATGGCAAGGTTGG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCACCTCTTCCACTTGTTaGTCTCTCACAAAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPTSSTC*SLTKAA
Trigger: TGCAGCTTTTGTGAGAGAGCAACAAGTGGAAGAGGT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCACACCTGCTGGTTTTGTaGCTTCTTCTATCACATTCT +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSHLLVL*LLLSHS
Trigger: AGAATGTGATAGAAGAAGCCACAAAACCAGCAGGTG...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTGCTGAAATCAAGTGGTaGAATACTGCTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFAEIKW*NTAGDG
Trigger: TCCATCACCAGCAGTATTCCACCACTTGATTTCAGC...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGAGAGCTGAAATCAAGTaGTGGAATACTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLRAEIK*WNTAGD
Trigger: ATCACCAGCAGTATTCCACCACTTGATTTCAGCTCT...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCACAATTACTTTTCAAATaGGCCCAGTGGAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSQLLFK*AQWKVS
Trigger: AGACACTTTCCACTGGGCCCATTTGAAAAGTAATTG...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGTTGTACATGAGTGGATaGATCTTTGCTGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLLYMSG*IFAGQT
Trigger: AGTTTGCCCAGCAAAGATCCATCCACTCATGTACAA...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGGAGGGCCATGCAGCTTaGAAGGTATTATCCAGAATA +
Preference number: 4 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWEGHAA*KVLSRI
Trigger: TATTCTGGATAATACCTTTCAAGCTGCATGGCCCTC...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGATCTGGCTTTACCATTaGAACCTCACTGTCAAACCA +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQIWLYH*NLTVKP
Trigger: TGGTTTGACAGTGAGGTTTCAATGGTAAAGCCAGAT...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAATTGTGCAGTGTAAATaGCAGTTCAGCCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSIVQCK*QFSLRL
Trigger: AAGTCTTAGGCTGAACTGTCATTTACACTGCACAAT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCAGTAGAGGCAGAGATTaGTACAGATGTCAGTATAAG +
Preference number: 4 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSSRGRD*YRCQYK
Trigger: CTTATACTGACATCTGTAGCAATCTCTGCCTCTACT...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTCTGTGGTGTACTTaGCAATATGTCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQTLWCT*QYVSGQ
Trigger: TTGTCCAGAGACATATTGGCAAGTACACCACAGAGT...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCAGCTTTACTGTGGCATaGACTGAGCCCAGATATTTA +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPSFTVA*TEPRYL
Trigger: TAAATATCTGGGCTCAGTGCATGCCACAGTAAAGCT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTACACCCTTAAACCATTaGAATGGTGAAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFTPLNH*NGENGA
Trigger: GGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGT...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAGGAAACATAATCATTTaGGCCAAAACCAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSGNIII*AKTKGM
Trigger: CATTCCTTTGGTTTTGGCCCAAATGATTATGTTTCC...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGGCACTCTTGGGTTCTTaGATCTCCTCTATAGATAAG +
Preference number: 4 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQALLGS*ISSIDK
Trigger: CTTATCTATAGAGGAGATCCAAGAACCCAAGAGTGC...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAAGAGTCTTCCATGGATaGTATTGTTTCTTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSRVFHG*YCFFWH
Trigger: GTGCCAAAAGAAACAATACCATCCATGGAAGACTCT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCATTGCCAATATGTCTCTaGACAATTTCTCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSLPICL*TISLGK
Trigger: CTTCCCTAGAGAAATTGTCCAGAGACATATTGGCAA...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCAACCTTTCAACAGTaGTTCAGCTATAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPSTFQQ*FSYSKG
Trigger: GCCTTTGCTATAGCTGAACCACTGTTGAAAGGTTGA...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGGCTTTGCTTTGTACATaGGTGGATGGATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKALLCT*VDGSLL
Trigger: CAGCAAAGATCCATCCACTCATGTACAAAGCAAAGC...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTAGTTTTACAAAATGCATaGCTCAAGGAAATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HKREQTPLNHCNGENGALVLQNA*LKEISR
Trigger: CCTGGAAATTTCCTTGAGTCATGCATTTTGTAAAAC...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGAGTTCTTCCCTGTACTaGTTCCCCAAAAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKSSSLY*FPKRWI
Trigger: TATCCACCTTTTGGGGAAGCAGTACAGGGAAGAACT...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCTCTCTCACAAAAGCTaGAAACTCAGGATCATTGGC +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKLSHKS*KLRIIG
Trigger: GCCAATGATCCTGAGTTTGCAGCTTTTGTGAGAGAG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCAATCTGTTCACCTGCTaGTTTTGTGGCTTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPNLFTC*FCGFFY
Trigger: ATAGAAGAAGCCACAAAACCAGCAGGTGAACAGATT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCACATCAGAGTCTTCCATaGATGGTATTGTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSHQSLP*MVLFLL
Trigger: CAAAAGAAACAATACCATCCATGGAAGACTCTGATG...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTTAACTCTTTTTCCATaGATGCATCTGGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPLTLFP*MHLAGK
Trigger: CTTTCCTGCCAGATGCATCCATGGAAAAAGAGTTAA...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTGGTATTGTAGGCAGTaGTACAAAAGTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPWYCRQ*YKSLPE
Trigger: TTCTGGAAGACTTTTGTACCACTGCCTACAATACCA...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTCAAACTCAGGATCATTaGCATACAGTTCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFQTQDH*HTVPKL
Trigger: GAGTTTTGGAACTGTATGCCAATGATCCTGAGTTTG...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTACCAGGATATCCTTTGTaGAATACAATGCAATGGATT +
Preference number: 4 (lower is better)
Translates to: HKREQTPLNHCNGENGALPGYPL*NTMQWI
Trigger: AATCCATTGCATTGTATTCCACAAAGGATATCCTGG...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCCCTCCCTGCCCATGTaGTTAAATTTGTCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKPSLPM*LNLSLD
Trigger: ATCTAAAGACAAATTTAATCACATGGGCAGGGAGGG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR TCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCAAAGTGTACCTATACTaGACTGTTAGAGGATCCATT +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPKVYLY*TVRGSI
Trigger: AATGGATCCTCTAACAGTTCAGTATAGGTACACTTT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTAATTCTAAGAATCTTTaGTCCAGGGCTTTATACTCC +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFNSKNL*SRALYS
Trigger: GGAGTATAAAGCCCTGGAGCAAAGATTCTTAGAATT...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGGCTCCTTTAGTGCTTTaGTTTGTACATGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKAPLVL*FVHEWM
Trigger: CATCCACTCATGTACAAAGCAAAGCACTAAAGGAGC...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGAGCCAGACTTCTCCATaGAAGAGTCTCACCTTATTT +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKSQTSP*KSLTLF
Trigger: AAATAAGGTGAGACTCTTCCATGGAGAAGTCTGGCT...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCAAATTCCCACTTCACTaGTTAGTTTGTGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPKFPLH*LVCGKQ
Trigger: TTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTT...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTTTCATTCCTCAATTGTaGAGTGTAAATGACAGTTCA +
Preference number: 4 (lower is better)
Translates to: KREQTPLNHCNGENGALFFIPQL*SVNDSS
Trigger: TGAACTGTCATTTACACTGCACAATTGAGGAATGAA...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCTGACTCTTCAACATTaGCTAATCCATCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKLTLQH*LIHLLP
Trigger: TGGTAGAAGATGGATTAGCCAATGTTGAAGAGTCAG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR GCA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGATAGTCCACAAAGTTTaGATATCTGGCTTTACCATT +
Preference number: 4 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKIVHKV*ISGFTI
Trigger: AATGGTAAAGCCAGATATGCAAACTTTGTGGACTAT...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 90 bp ATAGTGATGCCTATGATCACGGGCTCAGACACAAATTCCTCACAGTaGTTGCCTCGGTACCACCAGTTCTCACCCACCCGGCACCTACAA +
Preference number: 5 (lower is better)
Translates to: IVMPMITGSDTNSSQ*LPRYHQFSPTRHLQ
Trigger: TTGTAGGTGCCGGGTGGGTGAGAACTGGTGGTACCGAGGCAAGCACTGTGAGGAATTTGTGTCTGAGCCCGTGATCATAGGCATCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp GTGACTTTCATACACGGGGTTGTACTTCACAGCATTCTCAATAGATaGGAGGCTGTCAGGCTGCCTGCTGGAGCCACTGAAGGGACTCTC +
Preference number: 5 (lower is better)
Translates to: VTFIHGVVLHSILNR*EAVRLPAGATEGTL
Trigger: GAGAGTCCCTTCAGTGGCTCCAGCAGGCAGCCTGACAGCCTCTCATCTATTGAGAATGCTGTGAAGTACAACCCCGTGTATGAAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGGATAAGGGAGCCACCTaGGCGCGGGCGCACATGCGC +
Preference number: 5 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLDKGAT*ARAHMR
Trigger: GCGCATGTGCGCCCGCGCCAAGGTGGCTCCCTTATC...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp TTTCCATCATTCAAGCAGAAGTCAGGCTGTAGGTCACAGAGACTCTaGCAGGGCCGTTCTTCCACACTCAGGTATCCAGGGAAGCATCTG +
Preference number: 5 (lower is better)
Translates to: FPSFKQKSGCRSQRL*QGRSSTLRYPGKHL
Trigger: CAGATGCTTCCCTGGATACCTGAGTGTGGAAGAACGGCCCTGTCAGAGTCTCTGTGACCTACAGCCTGACTTCTGCTTGAATGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCAAGCACGAGAATCGCTaGAACCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGKHENR*NPGGRG
Trigger: ACCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCTT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp AATTTCATTGCTAATACTCTCCTCTGGCCTTTCCAAGCTGCTCTCTaGGGCACCTTCATAGGCGTCCACCTCTGGATGTGGAACACTGAG +
Preference number: 5 (lower is better)
Translates to: NFIANTLLWPFQAAL*GTFIGVHLWMWNTE
Trigger: CTCAGTGTTCCACATCCAGAGGTGGACGCCTATGAAGGTGCCTCAGAGAGCAGCTTGGAAAGGCCAGAGGAGAGTATTAGCAATGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp TTATCATCCAGTTCCACAAGGCCATGGTTTTCCACCTTGTTGGAGTaGAGGCTAATGAGGTCCCAGGTGGTATTGCTGATGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: LSSSSTRPWFSTLLE*RLMRSQVVLLMASP
Trigger: TGGTGAGGCCATCAGCAATACCACCTGGGACCTCATTAGCCTTCACTCCAACAAGGTGGAAAACCATGGCCTTGTGGAACTGGATGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 90 bp GAGGTCCCAGGTGGTATTGCTGATGGCCTCACCATTGAAGGTAACTaGATAGTAAACATCTACGCCACTGTCATTTTCCTTGGGGGACCT +
Preference number: 5 (lower is better)
Translates to: EVPGGIADGLTIEGN*IVNIYATVIFLGGP
Trigger: AGGTCCCCCAAGGAAAATGACAGTGGCGTAGATGTTTACTATGCAGTTACCTTCAATGGTGAGGCCATCAGCAATACCACCTGGGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCCCCAGGAGGCAGAGGTaGCCAGGAGCTGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPPRRQR*PGAEIA
Trigger: GGCGATCTCAGCTCCTGGCAACCTCTGCCTCCTGGG...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp CATCATGTTAGTCACTCGGAGGCTGAAGAAAACCACCAAAGCTCCTaGAGTCTGGGTATAACTCAAGTCATCTCCTCCTTCTGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: HHVSHSEAEENHQSS*SLGITQVISSFCGP
Trigger: TGGCCCACAGAAGGAGGAGATGACTTGAGTTATACCCAGACTTCAGGAGCTTTGGTGGTTTTCTTCAGCCTCCGAGTGACTAACATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp GCATCTGCACTTTGCTTCTCCACTCCAGGGGTTGACCAGACACTCTaGAAATTCATTACAGGCCTGAAACTTGCAAGGGTTGGCTTCATC +
Preference number: 5 (lower is better)
Translates to: ASALCFSTPGVDQTL*KFITGLKLARVGFI
Trigger: GATGAAGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATTTTCAGAGTGTCTGGTCAACCCCTGGAGTGGAGAAGCAAAGTGCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 90 bp CAATCTCAGCTGGCAAAAGTGAATCATCATCTTCAAGCCACGGCTTaGACAGTGGTTCAGCGCTCTTCTCTGATGAAGTCTCACTCCATG +
Preference number: 5 (lower is better)
Translates to: QSQLAKVNHHLQATA*TVVQRSSLMKSHSM
Trigger: CATGGAGTGAGACTTCATCAGAGAAGAGCGCTGAACCACTGTCCAAGCCGTGGCTTGAAGATGATGATTCACTTTTGCCAGCTGAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAACTAGCAGGGTGGAGATaGTGGTTGGAGGCAATTTGG +
Preference number: 5 (lower is better)
Translates to: MVPSHISTFRQDILCGIQLAGWR*WLEAIW
Trigger: CCAAATTGCCTCCAACCACAATCTCCACCCTGCTAG...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAAAATTCCTCACAGTGCTaGCCTCGGTACCACCAGTTC +
Preference number: 5 (lower is better)
Translates to: MVPSHISTFRQDILCGIQNSSQC*PRYHQF
Trigger: GAACTGGTGGTACCGAGGCAAGCACTGTGAGGAATT...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGCTCAGCACTGGGGTCTaGACCCGACACTCACTCCCT +
Preference number: 5 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLLSTGV*TRHSLP
Trigger: AGGGAGTGAGTGTCGGGTCAAGACCCCAGTGCTGAG...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp CCACTCCAGGGGTTGACCAGACACTCTGAAAATTCATTACAGGCCTaGAACTTGCAAGGGTTGGCTTCATCACCTGATTCCACATCAAGA +
Preference number: 5 (lower is better)
Translates to: PLQGLTRHSENSLQA*NLQGLASSPDSTSR
Trigger: TCTTGATGTGGAATCAGGTGATGAAGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATTTTCAGAGTGTCTGGTCAACCCCTGGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCATCTTCAAGCCACGGCTaGGACAGTGGTTCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSSSSHG*DSGSAL
Trigger: GAGCGCTGAACCACTGTCCAAGCCGTGGCTTGAAGA...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCCACTCTGTGGTGTACTaGCCAATATGTCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGHSVVY*PICLWT
Trigger: TGTCCAGAGACATATTGGCAAGTACACCACAGAGTG...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTATGTACACCGCATTGTaGACGTTAGGAGGGACAGAA +
Preference number: 5 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSMYTAL*TLGGTE
Trigger: TTCTGTCCCTCCTAACGTCAACAATGCGGTGTACAT...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAATCTCCACTCCAGGGGTaGACCAGACACTCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: MVPSHISTFRQDILCGIQSPLQG*TRHSEN
Trigger: ATTTTCAGAGTGTCTGGTCAACCCCTGGAGTGGAGA...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCAAGGCAGGACAAAAGTaGTATTCCTCAACTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGKAGQK*YSSTEA
Trigger: GGCCTCAGTTGAGGAATACAACTTTTGTCCTGCCTT...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 90 bp ACCAGAGCCTGTCAGCACTCTGTGGTGTACTTGCCAATATGTCTCTaGACAATTTCTCTAGGGAAGAAGTTCTTGTCCAAACTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: TRACQHSVVYLPICL*TISLGKKFLSKLSL
Trigger: CAGAGAGAGTTTGGACAAGAACTTCTTCCCTAGAGAAATTGTCCAGAGACATATTGGCAAGTACACCACAGAGTGCTGACAGGCTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp GCATTTTCAACCTCTGAAATAAATTCTTCTTCAAGGTGCTGGTGGTaGAAGCTGGAGGAATCCTGTAGTTCTTCCCTGTACTGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: AFSTSEINSSSRCWW*KLEESCSSSLYCFP
Trigger: GGGGAAGCAGTACAGGGAAGAACTACAGGATTCCTCCAGCTTTCACCACCAGCACCTTGAAGAAGAATTTATTTCAGAGGTTGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCTATCTGGCTTTACCATaGAAACCTCACTGTCAAACC +
Preference number: 5 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGYLALP*KPHCQT
Trigger: GGTTTGACAGTGAGGTTTCAATGGTAAAGCCAGATA...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAACCAACCTTGCCATTTaGCTCTTGGACTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSTNLAI*LLDLLR
Trigger: CCTGAGCAAGTCCAAGAGCAAAATGGCAAGGTTGGT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTCTGCCATTTCTGAAGTaGAGGATTTCTAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSLPFLK*RISKFW
Trigger: CCAGAACTTAGAAATCCTCAACTTCAGAAATGGCAG...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCAACCTCTTCCACTTGTaGCTCTCTCACAAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTNLFHL*LSHKSC
Trigger: GCAGCTTTTGTGAGAGAGCAACAAGTGGAAGAGGTT...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCCACCTTATTTTCCTATaGAAAAACCCGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGHLIFL*KNPRHS
Trigger: ACTGTGCCTCGGGTTTTTCAATAGGAAAATAAGGTG...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCAAATTCCCACTTCACTGCTTAGTTTGTGGAAAACAACAACCCTCCTCTGGCTACTCTTCCATTTCATaGGTGTGGAGCAGACATTCA +
Preference number: 5 (lower is better)
Translates to: PKFPLHCLVCGKQQPSSGYSSIS*VWSRHS
Trigger: TGAATGTCTGCTCCACACCAATGAAATGGAAGAGTA...GCCAGAGGAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGTGGGAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCCCGCCAGGATATCCTTaGTGGAATACAATGCAATGG +
Preference number: 5 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTPPGYP*WNTMQW
Trigger: CCATTGCATTGTATTCCACAAAGGATATCCTGGCGG...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 90 bp CTGTGGAGTGAACACTTGTTGACATTTCCACATAACTACCAACCTTaGCATTTTGCTCTTGGACTTGCTCAGGCTGATAGTAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: LWSEHLLTFPHNYQP*HFALGLAQADSNLC
Trigger: GCACAGATTACTATCAGCCTGAGCAAGTCCAAGAGCAAAATGGCAAGGTTGGTAGTTATGTGGAAATGTCAACAAGTGTTCACTCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTCGGAAAGAAAAATGGTaGTCCTTTCAAAGTAGCTCT +
Preference number: 5 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSRKEKW*SFQSSS
Trigger: AGAGCTACTTTGAAAGGACAACCATTTTTCTTTCCG...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ATGAGTGGATGGATCTTTGCTGGGCAAACTGTGTTCTTCAACCTTTCAACAGTGCTAGAGAAAGGTCTGTaGATTCTTCAGGCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: MSGWIFAGQTVFFNLSTVLEKGL*ILQAGE
Trigger: TTCTCCTGCCTGAAGAATCAACAGACCTTTCTCTAG...CACTGTTGAAAGGTTGAAGAACACAGTTTGCCCAGCAAAGATCCATCCACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCGTTCACCTGCTGGTTTaGTGGCTTCTTCTATCACAT +
Preference number: 5 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTVHLLV*WLLLSH
Trigger: ATGTGATAGAAGAAGCCACAAAACCAGCAGGTGAAC...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAACTTCCATGGATGGTATaGTTTCTTTTGGCACAGGTT +
Preference number: 5 (lower is better)
Translates to: MVPSHISTFRQDILCGIQLPWMV*FLLAQV
Trigger: AACCTGTGCCAAAAGAAACAATACCATCCATGGAAG...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAACTTCTGATATGTGCTaGGGGAGGGTTAGAGACGCA +
Preference number: 5 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSTSDMC*GRVRDA
Trigger: TGCGTCTCTAACCCTCCCCAAGCACATATCAGAAGT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAGTGGTTGGAGGCAATTaGGTAGACTGTGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSVVGGN*VDCVTD
Trigger: ATCTGTGACACAGTCTACCAAATTGCCTCCAACCAC...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGCCTGTCATGGTGTGCTaGGAGAGTCCTGATGAAGAA +
Preference number: 5 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLPVMVC*ESPDEE
Trigger: TTCTTCATCAGGACTCTCCAAGCACACCATGACAGG...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAAAAGAAACTGCACTCTaGGGTTCTTGGATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSKETAL*GSWISS
Trigger: AGAGGAGATCCAAGAACCCAAGAGTGCAGTTTCTTT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ATGGTACCCTCCCATATTTCCACCTTCCGCCAGGATATCCTTTGTGGAATACAATGGAGTGAACACTTGTaGACATTTCCACATAACTAC +
Preference number: 5 (lower is better)
Translates to: MVPSHISTFRQDILCGIQWSEHL*TFPHNY
Trigger: GTAGTTATGTGGAAATGTCAACAAGTGTTCACTCCA...TTGTATTCCACAAAGGATATCCTGGCGGAAGGTGGAAATATGGGAGGGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGATCATGTACACCGCATaGTTGACGTTAGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLIMYTA*LTLGGT
Trigger: TGTCCCTCCTAACGTCAACAATGCGGTGTACATGAT...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTGTGTGGGCTGAGAGCAGTGTTTTTAACCAGTCTTACTATCCTGAGGGGAGTTCAAAATGTTCAGAATaGGTTTTGGCAAGCATGAAG +
Preference number: 5 (lower is better)
Translates to: TVWAESSVFNQSYYPEGSSKCSE*VLASMK
Trigger: CTTCATGCTTGCCAAAACCAATTCTGAACATTTTGA...ACTCCCCTCAGGATAGTAAGACTGGTTAAAAACACTGCTCTCAGCCCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 90 bp TCTGATGAAGTCTCACTCCATGGCCAAGTAATCAGATCTACCTTTTaGCCAGACCCTGAACCTAAACCACCGTCAAATATTAACTCTTTT +
Preference number: 5 (lower is better)
Translates to: SDEVSLHGQVIRSTF*PDPEPKPPSNINSF
Trigger: AAAAGAGTTAATATTTGACGGTGGTTTAGGTTCAGGGTCTGGGCAAAAGGTAGATCTGATTACTTGGCCATGGAGTGAGACTTCATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 90 bp AAAATACTTCACATGATTTGCCACAGCCTCTGCAACACTTTCATCTaGGCAGATTTTCACTCCATTAGGAAACAGAATAGATCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: KILHMICHSLCNTFI*ADFHSIRKQNRSPP
Trigger: AGGCGGAGATCTATTCTGTTTCCTAATGGAGTGAAAATCTGCCCAGATGAAAGTGTTGCAGAGGCTGTGGCAAATCATGTGAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCACCACTGTCATTTTCCTaGGGGGACCTAAATTCAAGT +
Preference number: 5 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSPLSFS*GDLNSS
Trigger: ACTTGAATTTAGGTCCCCCAAGGAAAATGACAGTGG...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCACTAAAACTAGTTTCTaGTCTTCAATCTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: ERQDLPKTSLDFRSNQGTTKTSF*SSISAG
Trigger: GCCAGCTGAGATTGAAGACAAGAAACTAGTTTTAGT...GGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCAATTTTGCTCTTGGACTaGCTCAGGCTGATAGTAATC +
Preference number: 5 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSILLLD*LRLIVI
Trigger: GATTACTATCAGCCTGAGCAAGTCCAAGAGCAAAAT...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCACTGTGGAGTGAACACTaGTTGACATTTCCACATAAC +
Preference number: 5 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSLWSEH*LTFPHN
Trigger: GTTATGTGGAAATGTCAACAAGTGTTCACTCCACAG...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCGAGGAGAGACAGGATTaGCCCAAGACATCTTTAGAT +
Preference number: 5 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSEERQD*PKTSLD
Trigger: ATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTC...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCCAAAACTCCTCTCACATaGATAAGCTGCAGGGAATCA +
Preference number: 5 (lower is better)
Translates to: KCMTQGNFQAILYIMVPSKTPLT*ISCRES
Trigger: TGATTCCCTGCAGCTTATCAATGTGAGAGGAGTTTT...GGAGGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGCTTGCCATTTTGCTCTaGGACTTGCTCAGGCTGATA +
Preference number: 5 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWLAILL*DLLRLI
Trigger: TATCAGCCTGAGCAAGTCCAAGAGCAAAATGGCAAG...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTTAGGAGGGACAGAATaGGCAAACTTCATTCGACTG +
Preference number: 5 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPLGGTE*ANFIRL
Trigger: CAGTCGAATGAAGTTTGCCAATTCTGTCCCTCCTAA...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGGCAAACTCAGGATCATaGGCATACAGTTCCAAAACT +
Preference number: 5 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLANSGS*AYSSKT
Trigger: AGTTTTGGAACTGTATGCCAATGATCCTGAGTTTGC...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAGGGAACCTCATTCAGAACAGGAGTTTaGGTTAAACCTCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: RQDLPKTSLDFRSNQGTSFRTGV*VKPLPL
Trigger: AAGTGGAAGAGGTTTAACCAAAACTCCTGTTCTGAA...TGAGGTTCCCTGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAACTTCACTGCTTAGTTaGTGGAAAACAACAACCCTC +
Preference number: 5 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSTSLLS*WKTTTL
Trigger: GAGGGTTGTTGTTTTCCACAAACTAAGCAGTGAAGT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 90 bp CTCCAGGGCTTTATACTCCAAGGAGTTTTTATTAAACAGATCTTCTaGAAACATCATGTTAGTCACTCGGAGGCTGAAGAAAACCACCAA +
Preference number: 5 (lower is better)
Translates to: LQGFILQGVFIKQIF*KHHVSHSEAEENHQ
Trigger: TTGGTGGTTTTCTTCAGCCTCCGAGTGACTAACATGATGTTTTCAGAAGATCTGTTTAATAAAAACTCCTTGGAGTATAAAGCCCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 90 bp CTTGTCCAAACTCTCTCTGATTCTGGCAATATAGTCCACAAAGTTTaGATATCTGGCTTTACCATTGAAACCTCACTGTCAAACCATTCA +
Preference number: 5 (lower is better)
Translates to: LVQTLSDSGNIVHKV*ISGFTIETSLSNHS
Trigger: TGAATGGTTTGACAGTGAGGTTTCAATGGTAAAGCCAGATATGCAAACTTTGTGGACTATATTGCCAGAATCAGAGAGAGTTTGGACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACTAGAGGAGAGACAGGATTTGCCCAAGACATCTTTAGATTTCAGAAGCAATCAACATTCTCAATTTCATaGCTAATACTCTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TRGETGFAQDIFRFQKQSTFSIS*LILSSG
Trigger: GCCAGAGGAGAGTATTAGCAATGAAATTGAGAATGT...TGATTGCTTCTGAAATCTAAAGATGTCTTGGGCAAATCCTGTCTCTCCTCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGGCGTTGCCTGAAGACTaGAACTTTGGGTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKALPED*NFGCSK
Trigger: TTTGGAACACCCAAAGTTCAAGTCTTCAGGCAACGC...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp GCACACACACATTCACACATACACACACACAACCTGTTATCCATACATACTTTGGAGGGAAAGGCTAATTaGTGTGTAGACACTAAATCA +
Preference number: 5 (lower is better)
Translates to: AHTHSHIHTHNLLSIHTLEGKAN*CVDTKS
Trigger: TGATTTAGTGTCTACACACAAATTAGCCTTTCCCTC...CAAAGTATGTATGGATAACAGGTTGTGTGTGTGTATGTGTGAATGTGTGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCTCTGACTCTTCAACATaGGCTAATCCATCTTCTACC +
Preference number: 5 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPSDSST*ANPSST
Trigger: GGTAGAAGATGGATTAGCCAATGTTGAAGAGTCAGA...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAAAATGCATGACTCAAGGAAATTTCCAGGCAATTCTTTACATCATGGTACCCGAAGAGCTAAGTGTTTaGCTCTTGCATGAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: TKCMTQGNFQAILYIMVPEELSV*LLHEKV
Trigger: GACCTTTTCATGCAAGAGCAAAACACTTAGCTCTTC...GGGTACCATGATGTAAAGAATTGCCTGGAAATTTCCTTGAGTCATGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CATAAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTAAGGAAACATAATCATTaGGGCCAAAACCAAAGGAAT +
Preference number: 5 (lower is better)
Translates to: HKREQTPLNHCNGENGALRKHNH*GQNQRN
Trigger: ATTCCTTTGGTTTTGGCCCAAATGATTATGTTTCCT...TAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGAGAGGCTGTTTCTTTTaGGTAGCTAGAGAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWRGCFF*VARERS
Trigger: AGACCTTTCTCTAGCTACCAAAAAGAAACAGCCTCT...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTACTTTTAATTGGTCTTaGACTTTGGAGGTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: KREQTPLNHCNGENGALFTFNWS*TLEVKE
Trigger: CTCCTTGACCTCCAAAGTCAAAGACCAATTAAAAGT...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGCTTTCATACACGGGGTaGTACTTCACAGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKLSYTG*YFTAFS
Trigger: TGAGAATGCTGTGAAGTACAACCCCGTGTATGAAAG...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGTACAATGCAATGGATTaGAGAATAGTGACCGTCACA +
Preference number: 5 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQYNAMD*RIVTVT
Trigger: TGTGACGGTCACTATTCTCAAATCCATTGCATTGTA...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp AAACGTGAACAAACACCCTTAAACCATTGCAATGGTGAAAATGGAGCCCTATTTTATAGTCCACAAAGTTaGCATATCTGGCTTTACCAT +
Preference number: 5 (lower is better)
Translates to: KREQTPLNHCNGENGALFYSPQS*HIWLYH
Trigger: ATGGTAAAGCCAGATATGCAAACTTTGTGGACTATA...AAATAGGGCTCCATTTTCACCATTGCAATGGTTTAAGGGTGTTTGTTCACGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGTTAAACCTCTTCCACTaGTTGCTCTCTCACAAAAGC +
Preference number: 5 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKLNLFH*LLSHKS
Trigger: GCTTTTGTGAGAGAGCAACAAGTGGAAGAGGTTTAA...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp CCCTTCTACCCAACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGTTATCCATACATACTTaGCAAAATACCTGGCCATCT +
Preference number: 5 (lower is better)
Translates to: PFYPTITNMLQNIPLLSQLSIHT*QNTWPS
Trigger: AGATGGCCAGGTATTTTGCAAAGTATGTATGGATAA...CTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGTTGGGTAGAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp ACAATAACAAATATGCTCCAAAATATTCCCTTACTAAGCCAGACTTCTCCATGGTGCTTACAGTTTCCTTaGCATAAGTCAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TITNMLQNIPLLSQTSPWCLQFP*HKSVSS
Trigger: TGAAGAAACTGACTTATGCAAAGGAAACTGTAAGCA...CCATGGAGAAGTCTGGCTTAGTAAGGGAATATTTTGGAGCATATTTGTTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS-3UTR CAA 90 bp TTAAATGATGACATGCCATTAAATCACCTTCGAGGAAGGTCTTTTAGAAAGAAGAAGCTTTGCCCTGTTTaGTATAAGCAGGAGTTAATT +
Preference number: 5 (lower is better)
Translates to: LNDDMPLNHLRGRSFRKKKLCPV*YKQELI
Trigger: AATTAACTCCTGCTTATACAAAACAGGGCAAAGCTT...CTTCTTTCTAAAAGACCTTCCTCGAAGGTGATTTAATGGCATGTCATCATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 72 bp CCTATGATCACGGGCTCAGACACAAATTCCTCACAGTaGTTGCCTCGGTACCACCAGTTCTCACCCACCCGG +
Preference number: 6 (lower is better)
Translates to: PMITGSDTNSSQ*LPRYHQFSPTR
Trigger: CCGGGTGGGTGAGAACTGGTGGTACCGAGGCAAGCACTGTGAGGAATTTGTGTCTGAGCCCGTGATCATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp ATGATCACGGGCTCAGACACAAATTCCTCACAGTGCTaGCCTCGGTACCACCAGTTCTCACCCACCCGGCAC +
Preference number: 6 (lower is better)
Translates to: MITGSDTNSSQC*PRYHQFSPTRH
Trigger: GTGCCGGGTGGGTGAGAACTGGTGGTACCGAGGCAAGCACTGTGAGGAATTTGTGTCTGAGCCCGTGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp GTGATGCCTATGATCACGGGCTCAGACACAAATTCCTCACAGTGCTaGCCTCGGTACCACCAGTTCTCACCCACCCGGCACCTACAAATG +
Preference number: 6 (lower is better)
Translates to: VMPMITGSDTNSSQC*PRYHQFSPTRHLQM
Trigger: CATTTGTAGGTGCCGGGTGGGTGAGAACTGGTGGTACCGAGGCAAGCACTGTGAGGAATTTGTGTCTGAGCCCGTGATCATAGGCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp TTCAAGCAGAAGTCAGGCTGTAGGTCACAGAGACTCTaGCAGGGCCGTTCTTCCACACTCAGGTATCCAGGG +
Preference number: 6 (lower is better)
Translates to: FKQKSGCRSQRL*QGRSSTLRYPG
Trigger: CCCTGGATACCTGAGTGTGGAAGAACGGCCCTGTCAGAGTCTCTGTGACCTACAGCCTGACTTCTGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 72 bp TTCCTCAGAAGCCACAGGCAAGCCAGTCTGAAGCACTaGCGGGGTGACAGAATGAAGAGTCAAGCTGCTAAC +
Preference number: 6 (lower is better)
Translates to: FLRSHRQASLKH*RGDRMKSQAAN
Trigger: GTTAGCAGCTTGACTCTTCATTCTGTCACCCCGGCAGTGCTTCAGACTGGCTTGCCTGTGGCTTCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp AGTTCCACAAGGCCATGGTTTTCCACCTTGTTGGAGTaGAGGCTAATGAGGTCCCAGGTGGTATTGCTGATG +
Preference number: 6 (lower is better)
Translates to: SSTRPWFSTLLE*RLMRSQVVLLM
Trigger: CATCAGCAATACCACCTGGGACCTCATTAGCCTTCACTCCAACAAGGTGGAAAACCATGGCCTTGTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp CCTCTCTGGAAAGCTCACTGCTCTCATACATCTGTCTaGTTTCTTCTCTGCTCAGCCCACCAATCACGTCTC +
Preference number: 6 (lower is better)
Translates to: PLWKAHCSHTSV*FLLCSAHQSRL
Trigger: GAGACGTGATTGGTGGGCTGAGCAGAGAAGAAATCAGACAGATGTATGAGAGCAGTGAGCTTTCCAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp GCTGGCAAAAGTGAATCATCATCTTCAAGCCACGGCTaGGACAGTGGTTCAGCGCTCTTCTCTGATGAAGTC +
Preference number: 6 (lower is better)
Translates to: AGKSESSSSSHG*DSGSALFSDEV
Trigger: GACTTCATCAGAGAAGAGCGCTGAACCACTGTCCAAGCCGTGGCTTGAAGATGATGATTCACTTTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp ACCTCTGGGGAAGAGCTGAGGCCCATCTTCGAGGGAAAGGCTAATTaGTGTGTAGACACTAAATCACCCAAAGGACTTTCTGACCAGAGT +
Preference number: 6 (lower is better)
Translates to: TSGEELRPIFEGKAN*CVDTKSPKGLSDQS
Trigger: ACTCTGGTCAGAAAGTCCTTTGGGTGATTTAGTGTCTACACACAAATTAGCCTTTCCCTCGAAGATGGGCCTCAGCTCTTCCCCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp AGTCACTCGGAGGCTGAAGAAAACCACCAAAGCTCCTaGAGTCTGGGTATAACTCAAGTCATCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SHSEAEENHQSS*SLGITQVISSF
Trigger: GAAGGAGGAGATGACTTGAGTTATACCCAGACTTCAGGAGCTTTGGTGGTTTTCTTCAGCCTCCGAGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 72 bp CTGGCAAAAGTGAATCATCATCTTCAAGCCACGGCTTaGACAGTGGTTCAGCGCTCTTCTCTGATGAAGTCT +
Preference number: 6 (lower is better)
Translates to: LAKVNHHLQATA*TVVQRSSLMKS
Trigger: AGACTTCATCAGAGAAGAGCGCTGAACCACTGTCCAAGCCGTGGCTTGAAGATGATGATTCACTTTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 72 bp GATGGGCACAGCAGGCCCACTAAGAGGCTCTTCCTCTaGAAAGTGTGTGGATCTGTCATCATGTTCATATTT +
Preference number: 6 (lower is better)
Translates to: DGHSRPTKRLFL*KVCGSVIMFIF
Trigger: AAATATGAACATGATGACAGATCCACACACTTTCCAGAGGAAGAGCCTCTTAGTGGGCCTGCTGTGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp TCAATCTCAGCTGGCAAAAGTGAATCATCATCTTCAAGCCACGGCTaGGACAGTGGTTCAGCGCTCTTCTCTGATGAAGTCTCACTCCAT +
Preference number: 6 (lower is better)
Translates to: SISAGKSESSSSSHG*DSGSALFSDEVSLH
Trigger: ATGGAGTGAGACTTCATCAGAGAAGAGCGCTGAACCACTGTCCAAGCCGTGGCTTGAAGATGATGATTCACTTTTGCCAGCTGAGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp GACTCTTCAACATTGGCTAATCCATCTTCTACCAAGTaGGATCCAGAAGTCCTTTCCTCAGAAGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: DSSTLANPSSTK*DPEVLSSEATG
Trigger: GCCTGTGGCTTCTGAGGAAAGGACTTCTGGATCTCACTTGGTAGAAGATGGATTAGCCAATGTTGAAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp GGGTTGACCAGACACTCTGAAAATTCATTACAGGCCTaGAACTTGCAAGGGTTGGCTTCATCACCTGATTCC +
Preference number: 6 (lower is better)
Translates to: GLTRHSENSLQA*NLQGLASSPDS
Trigger: GGAATCAGGTGATGAAGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATTTTCAGAGTGTCTGGTCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp CTTTGCTTCTCCACTCCAGGGGTTGACCAGACACTCTaGAAATTCATTACAGGCCTGAAACTTGCAAGGGTT +
Preference number: 6 (lower is better)
Translates to: LCFSTPGVDQTL*KFITGLKLARV
Trigger: AACCCTTGCAAGTTTCAGGCCTGTAATGAATTTTCAGAGTGTCTGGTCAACCCCTGGAGTGGAGAAGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp GCATCTGGCAGGAAAGGGCTCACTTTTAATTGGTCTTaGACTTTGGAGGTCAAGGAGTCCAAGCCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: ASGRKGLTFNWS*TLEVKESKPKG
Trigger: ACCTTTTGGCTTGGACTCCTTGACCTCCAAAGTCAAAGACCAATTAAAAGTGAGCCCTTTCCTGCCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp CAGATAACCAGAGCCTGTCAGCACTCTGTGGTGTACTaGCCAATATGTCTCTGGACAATTTCTCTAGGGAAG +
Preference number: 6 (lower is better)
Translates to: QITRACQHSVVY*PICLWTISLGK
Trigger: CTTCCCTAGAGAAATTGTCCAGAGACATATTGGCAAGTACACCACAGAGTGCTGACAGGCTCTGGTTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp CACATAACTACCAACCTTGCCATTTTGCTCTTGGACTaGCTCAGGCTGATAGTAATCTGTGCCTATCCGGTC +
Preference number: 6 (lower is better)
Translates to: HITTNLAILLLD*LRLIVICAYPV
Trigger: GACCGGATAGGCACAGATTACTATCAGCCTGAGCAAGTCCAAGAGCAAAATGGCAAGGTTGGTAGTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp GATGCATCTGGCAGGAAAGGGCTCACTTTTAATTGGTCTTTGACTTaGGAGGTCAAGGAGTCCAAGCCAAAAGGTATAGAAGAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: DASGRKGLTFNWSLT*EVKESKPKGIEEVR
Trigger: TCTGACCTCTTCTATACCTTTTGGCTTGGACTCCTTGACCTCCAAAGTCAAAGACCAATTAAAAGTGAGCCCTTTCCTGCCAGATGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp TCCATGGATGCATCTGGCAGGAAAGGGCTCACTTTTAATTGGTCTTaGACTTTGGAGGTCAAGGAGTCCAAGCCAAAAGGTATAGAAGAG +
Preference number: 6 (lower is better)
Translates to: SMDASGRKGLTFNWS*TLEVKESKPKGIEE
Trigger: CTCTTCTATACCTTTTGGCTTGGACTCCTTGACCTCCAAAGTCAAAGACCAATTAAAAGTGAGCCCTTTCCTGCCAGATGCATCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp TCCAGAATCATGTACACCGCATTGTTGACGTTAGGAGGGACAGAATaGGCAAACTTCATTCGACTGTTCACCACAATGCTGCCATTTCTG +
Preference number: 6 (lower is better)
Translates to: SRIMYTALLTLGGTE*ANFIRLFTTMLPFL
Trigger: CAGAAATGGCAGCATTGTGGTGAACAGTCGAATGAAGTTTGCCAATTCTGTCCCTCCTAACGTCAACAATGCGGTGTACATGATTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp CATCTGGCAGGAAAGGGCTCACTTTTAATTGGTCTTTaGCTTTGGAGGTCAAGGAGTCCAAGCCAAAAGGTA +
Preference number: 6 (lower is better)
Translates to: HLAGKGSLLIGL*LWRSRSPSQKV
Trigger: TACCTTTTGGCTTGGACTCCTTGACCTCCAAAGTCAAAGACCAATTAAAAGTGAGCCCTTTCCTGCCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp GAAGAGCTGAGGCCCATCTTCGAGGGAAAGGCTAATTaGTGTGTAGACACTAAATCACCCAAAGGACTTTCT +
Preference number: 6 (lower is better)
Translates to: EELRPIFEGKAN*CVDTKSPKGLS
Trigger: AGAAAGTCCTTTGGGTGATTTAGTGTCTACACACAAATTAGCCTTTCCCTCGAAGATGGGCCTCAGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp ATGTACACCGCATTGTTGACGTTAGGAGGGACAGAATaGGCAAACTTCATTCGACTGTTCACCACAATGCTG +
Preference number: 6 (lower is better)
Translates to: MYTALLTLGGTE*ANFIRLFTTML
Trigger: CAGCATTGTGGTGAACAGTCGAATGAAGTTTGCCAATTCTGTCCCTCCTAACGTCAACAATGCGGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 90 bp AACCACTGTCTTTCAGTTTCTCTGCGGTCCAGAGGCTGTTTCTTTTaGGTAGCTAGAGAAAGGTCTGTTGATTCTTCAGGCAGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: NHCLSVSLRSRGCFF*VARERSVDSSGRRK
Trigger: TTTTCTCCTGCCTGAAGAATCAACAGACCTTTCTCTAGCTACCAAAAAGAAACAGCCTCTGGACCGCAGAGAAACTGAAAGACAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp GAACTTTGGGTGTTCCAAACTAGATCTTCAGTTTGGTaGCGCAAAACTCCTCTCACATTGATAAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ELWVFQTRSSVW*RKTPLTLISCR
Trigger: CCTGCAGCTTATCAATGTGAGAGGAGTTTTGCGTCACCAAACTGAAGATCTAGTTTGGAACACCCAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 72 bp GGTGGTATTGCTGATGGCCTCACCATTGAAGGTAACTaGATAGTAAACATCTACGCCACTGTCATTTTCCTT +
Preference number: 6 (lower is better)
Translates to: GGIADGLTIEGN*IVNIYATVIFL
Trigger: AAGGAAAATGACAGTGGCGTAGATGTTTACTATGCAGTTACCTTCAATGGTGAGGCCATCAGCAATACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp GTGGTACAAAAGTCTTCCAGAATCATGTACACCGCATaGTTGACGTTAGGAGGGACAGAATTGGCAAACTTC +
Preference number: 6 (lower is better)
Translates to: VVQKSSRIMYTA*LTLGGTELANF
Trigger: GAAGTTTGCCAATTCTGTCCCTCCTAACGTCAACAATGCGGTGTACATGATTCTGGAAGACTTTTGTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS GCA 72 bp GAACACTTGTTGACATTTCCACATAACTACCAACCTTaGCATTTTGCTCTTGGACTTGCTCAGGCTGATAGT +
Preference number: 6 (lower is better)
Translates to: EHLLTFPHNYQP*HFALGLAQADS
Trigger: ACTATCAGCCTGAGCAAGTCCAAGAGCAAAATGGCAAGGTTGGTAGTTATGTGGAAATGTCAACAAGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 72 bp CACATGATTTGCCACAGCCTCTGCAACACTTTCATCTaGGCAGATTTTCACTCCATTAGGAAACAGAATAGA +
Preference number: 6 (lower is better)
Translates to: HMICHSLCNTFI*ADFHSIRKQNR
Trigger: TCTATTCTGTTTCCTAATGGAGTGAAAATCTGCCCAGATGAAAGTGTTGCAGAGGCTGTGGCAAATCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 72 bp TGTCAGCACTCTGTGGTGTACTTGCCAATATGTCTCTaGACAATTTCTCTAGGGAAGAAGTTCTTGTCCAAA +
Preference number: 6 (lower is better)
Translates to: CQHSVVYLPICL*TISLGKKFLSK
Trigger: TTTGGACAAGAACTTCTTCCCTAGAGAAATTGTCCAGAGACATATTGGCAAGTACACCACAGAGTGCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp CATTTCCACATAACTACCAACCTTGCCATTTTGCTCTaGGACTTGCTCAGGCTGATAGTAATCTGTGCCTAT +
Preference number: 6 (lower is better)
Translates to: HFHITTNLAILL*DLLRLIVICAY
Trigger: ATAGGCACAGATTACTATCAGCCTGAGCAAGTCCAAGAGCAAAATGGCAAGGTTGGTAGTTATGTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp ATTCGACTGTTCACCACAATGCTGCCATTTCTGAAGTaGAGGATTTCTAAGTTCTGGAACCCCGTGAGATTT +
Preference number: 6 (lower is better)
Translates to: IRLFTTMLPFLK*RISKFWNPVRF
Trigger: AAATCTCACGGGGTTCCAGAACTTAGAAATCCTCAACTTCAGAAATGGCAGCATTGTGGTGAACAGTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CCA 72 bp GTTGCTCTCTCACAAAAGCTGCAAACTCAGGATCATTaGCATACAGTTCCAAAACTCTCATTCTCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: VALSQKLQTQDH*HTVPKLSFSLE
Trigger: TTCAAGAGAGAATGAGAGTTTTGGAACTGTATGCCAATGATCCTGAGTTTGCAGCTTTTGTGAGAGAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS CAA 72 bp GTACAAAAGTCTTCCAGAATCATGTACACCGCATTGTaGACGTTAGGAGGGACAGAATTGGCAAACTTCATT +
Preference number: 6 (lower is better)
Translates to: VQKSSRIMYTAL*TLGGTELANFI
Trigger: AATGAAGTTTGCCAATTCTGTCCCTCCTAACGTCAACAATGCGGTGTACATGATTCTGGAAGACTTTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8
CDS TCA 72 bp TCTTCCATGGATGGTATTGTTTCTTTTGGCACAGGTTaGGTGAATGAACTTGAAGGCAATGAATCAATAGAA +
Preference number: 6 (lower is better)
Translates to: SSMDGIVSFGTG*VNELEGNESIE
Trigger: TTCTATTGATTCATTGCCTTCAAGTTCATTCACTCAACCTGTGCCAAAAGAAACAATACCATCCATGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000193391.8