RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IMPDH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000178035

Ensembl transcript IDs: ENST00000429182.6, ENST00000462980.2, ENST00000463903.1, ENST00000466147.5, ENST00000472328.2, ENST00000481274.1, ENST00000484872.1, ENST00000485500.1, ENST00000491610.2, ENST00000496837.1, ENST00000676607.1, ENST00000676627.1, ENST00000676708.1, ENST00000676864.1, ENST00000677010.1, ENST00000677108.1, ENST00000677168.1, ENST00000677185.1, ENST00000677205.1, ENST00000677344.1, ENST00000677480.1, ENST00000677519.1, ENST00000677593.1, ENST00000677740.1, ENST00000677991.1, ENST00000678001.1, ENST00000678085.1, ENST00000678177.1, ENST00000678603.1, ENST00000678724.1, ENST00000678920.1, ENST00000679019.1, ENST00000679117.1, ENST00000679339.1

Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATaGCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: LPIRPVSVIGIPQKP*RALASKTSRTRSLG
Trigger: CCCCAAGGATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR GCA 90 bp CTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGAGTGTTGGATaGCAGCAATCAGGTAAGGGACAAATTTGTGGATTGACCCTTTGT +
Preference number: 1 (lower is better)
Translates to: LGSSSWHQCPGMSVG*QQSGKGQICGLTLC
Trigger: ACAAAGGGTCAATCCACAAATTTGTCCCTTACCTGATTGCTGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 90 bp CGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTaGGCCTCAAAAACATCCCGCACGCGATCCTTGGGGCTGAGGACC +
Preference number: 2 (lower is better)
Translates to: RPVSVIGIPQKPCRA*ASKTSRTRSLGLRT
Trigger: GGTCCTCAGCCCCAAGGATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCAATACCGCAGAAACCATaGCGGGCCTTGGCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNAIPQKP*RALASK
Trigger: TTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTAT...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCAATGAGTGCCAATGGCTaGCCCACACAGCAGCTGTTT +
Preference number: 2 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNAMSANG*PTQQLF
Trigger: AAACAGCTGCTGTGTGGGGCAGCCATTGGCACTCAT...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR TCA 90 bp TTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAAGTTGCCTCCTTCAGTGTaGTGCCTGCAGGGGCTACCA +
Preference number: 2 (lower is better)
Translates to: FPWEESKTTTSTPAWASKLPPSV*CLQGLP
Trigger: TGGTAGCCCCTGCAGGCATCACACTGAAGGAGGCAA...CTTGCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATCTTGTACACTGCTGTTaGTTGGGGCCGCCCACAGGC +
Preference number: 2 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHLVHCC*LGPPTG
Trigger: GCCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAG...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCAGCCTGTGTCTGTGATTaGGATACCGCAGAAACCATG +
Preference number: 2 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNAACVCD*DTAETM
Trigger: CATGGTTTCTGCGGTATCCCAATCACAGACACAGGC...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCGGTGTACAGTTGTGGTaGATGAAGCCAATACCGCCT +
Preference number: 2 (lower is better)
Translates to: DTAETMPGLGLKNIPHAIGVQLW*MKPIPP
Trigger: AGGCGGTATTGGCTTCATCCACCACAACTGTACACC...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679117.1
3UTR-3UTR GCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTTGTCATCCTCATGAGTaGCAATGGCTGCCCCACACA +
Preference number: 2 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPCHPHE*QWLPHT
Trigger: TGTGTGGGGCAGCCATTGGCACTCATGAGGATGACA...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGCTTCAGTGTGATGCCTaGAGGGGCTACCACCAAGTC +
Preference number: 2 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWLQCDA*RGYHQV
Trigger: GACTTGGTGGTAGCCCCTGCAGGCATCACACTGAAG...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATATTGACCCTTTGTCCTaGACAGCACCAGACACTCCC +
Preference number: 2 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHIDPLS*TAPDTP
Trigger: GGGAGTGTCTGGTGCTGTGCAGGACAAAGGGTCAAT...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CCA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCGCCTGTGTCTGTGATTaGGATACCGCAGAAACCATG +
Preference number: 2 (lower is better)
Translates to: EFPWEESKTTTSTPAWASACVCD*DTAETM
Trigger: CATGGTTTCTGCGGTATCCCAATCACAGACACAGGC...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR TCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGACCTTCCACCTGGGCTaGGGACGTTCTCTTCTCAAA +
Preference number: 2 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWTFHLG*GRSLLK
Trigger: TTTGAGAAGAGAACGTCCTCAGCCCAGGTGGAAGGT...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCCTTGTACACTGCTGTTaGTTGGGGCCGCCCACAGGC +
Preference number: 2 (lower is better)
Translates to: PDTPWATLILSASLKYLFLVHCC*LGPPTG
Trigger: GCCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAG...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGTTCTGGCTGCTGAGGTaGTTGTCCATGGCATCGAGA +
Preference number: 2 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWFWLLR*LSMASR
Trigger: TCTCGATGCCATGGACAAGCACCTCAGCAGCCAGAA...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CCA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAACTTTCCGAACTTCATTaGCCTGGAATTCAGGTGTAC +
Preference number: 2 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKLSELH*PGIQVY
Trigger: GTACACCTGAATTCCAGGCCAATGAAGTTCGGAAAG...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679117.1
3UTR-3UTR GCA 90 bp TTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAAGGCAACTTTCCCTTCTTaGTGCGCTGCAGAATTTCAT +
Preference number: 2 (lower is better)
Translates to: FPWEESKTTTSTPAWASKATFPS*CAAEFH
Trigger: ATGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGC...CTTGCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCGTTTCTTGGCATCTTTaGAGGCTAGTGGGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: PKGQGFRNMTHILDSSISVSWHL*RLVGSP
Trigger: GGGACTACCCACTAGCCTCCAAAGATGCCAAGAAAC...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGGTTTCTTGGCATCTTTaGAGGCTAGTGGGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWVSWHL*RLVGSP
Trigger: GGGACTACCCACTAGCCTCCAAAGATGCCAAGAAAC...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR TCA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGTTGCCTCCTTCAGTGTaGTGCCTGCAGGGGCTACCA +
Preference number: 2 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLLPPSV*CLQGLP
Trigger: TGGTAGCCCCTGCAGGCATCACACTGAAGGAGGCAA...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR TCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTAAGGCTTTCGCAATATaGCCCACATTTTGGATTCCT +
Preference number: 2 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPKAFAI*PTFWIP
Trigger: AGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTT...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGGCCTGTAAGCGCCATTaGTATGGCCATCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLACKRH*YGHPSL
Trigger: GAGGCTGGGATGGCCATAGCAATGGCGCTTACAGGC...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679117.1
3UTR-3UTR CCA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCAACCATGCCGGGCCTTaGCCTCAAAAACATCCCGCA +
Preference number: 2 (lower is better)
Translates to: PDTPWATLILSASLKYLFNHAGP*PQKHPA
Trigger: TGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTT...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR TCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGTTTTGTCAGCTTCACTaGAATATCTGTTCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWFCQLH*NICSGC
Trigger: GCAGCCAGAACAGATATTTCAGTGAAGCTGACAAAA...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR TCA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAATCCGGCCTGTGTCTGTaGTTGGGATACCGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLESGLCL*LGYRRN
Trigger: GTTTCTGCGGTATCCCAATCACAGACACAGGCCGGA...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR GCA 90 bp AGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCCTTCAGTGTGATGCCTaGAGGGGCTACCACCAAGTC +
Preference number: 2 (lower is better)
Translates to: RVFVFDVLDHIDLEDGISLQCDA*RGYHQV
Trigger: GACTTGGTGGTAGCCCCTGCAGGCATCACACTGAAG...GGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 90 bp GTGACCACATTGCCTCCAATGACTTGGAGATTAGGGTATTTGTCTTaGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: VTTLPPMTWRLGYLS*MYLIILIWKMEFPW
Trigger: CCAGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGTGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR TCA 72 bp TGCCCACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTaGTTGGGATACCGCAGAAACCATGCCGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: CPPSGSPSGLCL*LGYRRNHAGPW
Trigger: CCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CCA 72 bp CACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTaGGATACCGCAGAAACCATGCCGGGCCTTGGCCTC +
Preference number: 3 (lower is better)
Translates to: HQAAPHPACVCD*DTAETMPGLGL
Trigger: GAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR GCA 72 bp CGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATaGCGGGCCTTGGCCTCAAAAACATCCCGCACGCGA +
Preference number: 3 (lower is better)
Translates to: RPVSVIGIPQKP*RALASKTSRTR
Trigger: TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGTACACTGCTGTTGCTaGGGGCCGCCCACAGGCCAG +
Preference number: 3 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHVHCCC*GPPTGQ
Trigger: CTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGCCTTGTACACTGCTGTaGCTTGGGGCCGCCCACAGG +
Preference number: 3 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMPCTLL*LGAAHR
Trigger: CCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAGG...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CATCGAGAGAACCCATACCGCGATATTTCTTTAGCCGGATCCCATCGGAAAAGATCCCGCACGCGATCCTaGGGGCTGAGGACCACAGGG +
Preference number: 3 (lower is better)
Translates to: HRENPYRDISLAGSHRKRSRTRS*GLRTTG
Trigger: CCCTGTGGTCCTCAGCCCCAAGGATCGCGTGCGGGA...TCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATAAACCATGCCGGGCCTaGGCCTCAAAAACATCCCGC +
Preference number: 3 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHKPCRA*ASKTSR
Trigger: GCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTT...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGCATCAATGAGGTTCTaGGCCTGGGCAGCAGTGACC +
Preference number: 3 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHASMRF*AWAAVT
Trigger: GGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGC...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGCAGCAGTGACCACATaGCCTCCAATGACTTGGAGA +
Preference number: 3 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHAAVTT*PPMTWR
Trigger: TCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGC...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGGTACACTGCTGTTGCTaGGGGCCGCCCACAGGCCAG +
Preference number: 3 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLVHCCC*GPPTGQ
Trigger: CTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCGCAGCAGTGACCACATaGCCTCCAATGACTTGGAGA +
Preference number: 3 (lower is better)
Translates to: PKGQGFRNMTHILDSSISAAVTT*PPMTWR
Trigger: TCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGC...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CATCGAGAGAACCCATACCGCGATATTTCTTTAGCCGGATCCCATCGGAAAAGAGCATCAATGAGGTTCTaGGCCTGGGCAGCAGTGACC +
Preference number: 3 (lower is better)
Translates to: HRENPYRDISLAGSHRKRASMRF*AWAAVT
Trigger: GGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGC...TCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCGGCAACTTTCCCTTCTaGCTGCGCTGCAGAATTTCA +
Preference number: 3 (lower is better)
Translates to: PKGQGFRNMTHILDSSISGNFPF*LRCRIS
Trigger: TGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGCC...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGACTCCCTGGGCCACTTaGATTTTGTCAGCTTCACTG +
Preference number: 3 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWTPWAT*ILSASL
Trigger: CAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGT...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp TTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAAGTCATGTTCCTCCTCTTaGAGAAAATCAATGTCCCTG +
Preference number: 3 (lower is better)
Translates to: FPWEESKTTTSTPAWASKSCSSS*RKSMSL
Trigger: CAGGGACATTGATTTTCTCAAAGAGGAGGAACATGA...CTTGCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGCCAAGTCTTCCCTCTTaGTCATTATCTCTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMPSLPS*SLSLPR
Trigger: TCTTGGAAGAGATAATGACAAAGAGGGAAGACTTGG...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATATTGCCTCCAATGACTaGGAGATTAGGGTATTTGTC +
Preference number: 3 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHIASND*EIRVFV
Trigger: GACAAATACCCTAATCTCCAAGTCATTGGAGGCAAT...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTAATATGACCCACATTTaGGATTCCTCCATCAGCAAT +
Preference number: 3 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPNMTHI*DSSISN
Trigger: ATTGCTGATGGAGGAATCCAAAATGTGGGTCATATT...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR GCA 72 bp AGCTCTTGGCACCAATGTCCTGGCATGAGTGTTGGATaGCAGCAATCAGGTAAGGGACAAATTTGTGGATTG +
Preference number: 3 (lower is better)
Translates to: SSWHQCPGMSVG*QQSGKGQICGL
Trigger: CAATCCACAAATTTGTCCCTTACCTGATTGCTGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCAATTCAGGTGTACAGTaGTGGTGGATGAAGCCAATA +
Preference number: 3 (lower is better)
Translates to: PKGQGFRNMTHILDSSISNSGVQ*WWMKPI
Trigger: TATTGGCTTCATCCACCACAACTGTACACCTGAATT...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679117.1
3UTR CCA 72 bp GCCTGGGCAGCAGTGACCACATTGCCTCCAATGACTTaGAGATTAGGGTATTTGTCTTTGATGTACTTGATC +
Preference number: 3 (lower is better)
Translates to: AWAAVTTLPPMT*RLGYLSLMYLI
Trigger: GATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGCCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCACTTTCCGAACTTCATaGGCCTGGAATTCAGGTGTA +
Preference number: 3 (lower is better)
Translates to: PDTPWATLILSASLKYLFTFRTS*AWNSGV
Trigger: TACACCTGAATTCCAGGCCAATGAAGTTCGGAAAGT...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679117.1
3UTR-3UTR CAA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAAAACCATGCCGGGCCTaGGCCTCAAAAACATCCCGC +
Preference number: 3 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLEKPCRA*ASKTSR
Trigger: GCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTT...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGGCAACTTTCCCTTCTaGCTGCGCTGCAGAATTTCA +
Preference number: 3 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLEGNFPF*LRCRIS
Trigger: TGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGCC...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR-3UTR CAA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAATCATGTTCCTCCTCTTaGAGAAAATCAATGTCCCTG +
Preference number: 3 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLESCSSS*RKSMSL
Trigger: CAGGGACATTGATTTTCTCAAAGAGGAGGAACATGA...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCATGTGAGTCCGTCGTCTaGCACGTAGGACGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNACESVV*HVGRAP
Trigger: GGGGGCACGTCCTACGTGCCAGACGACGGACTCACA...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp ACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGTGAGTCCGTCGTCTaGCACGTAGGACGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TKRLPIRPVSVIGIPQKPCESVV*HVGRAP
Trigger: GGGGGCACGTCCTACGTGCCAGACGACGGACTCACA...TGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp ACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCAAGAGCTGCTGTGCTGTaGGTCCGTCGTCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: TKRLPIRPVSVIGIPQKPRAAVL*VRRLAR
Trigger: ACGTGCCAGACGACGGACTCACAGCACAGCAGCTCT...TGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GCCCACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAACAGGTCCACCTGGTCTaGAGTGAAGTCGATGTACCC +
Preference number: 4 (lower is better)
Translates to: AHQAAPHPACVCDWDTAEQVHLV*SEVDVP
Trigger: GGGTACATCGACTTCACTGCAGACCAGGTGGACCTG...TTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677480.1
CDS-3UTR GCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCCTTGTACACTGCTGTTaGTTGGGGCCGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAILVHCC*LGPPTG
Trigger: GCCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAG...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCTCAGGTAGTCGGCCATaGCCAACACAGGACACCGCC +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAISGSRP*PTQDTA
Trigger: GGCGGTGTCCTGTGTTGGCCATGGCCGACTACCTGA...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGAACGCCACCTTCCACCTaGGCTGAGGACGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GIPQKPCRALASKTSRTRTPPST*AEDVLF
Trigger: GAAGAGAACGTCCTCAGCCCAGGTGGAAGGTGGCGT...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCATTCCTCCATCAGCAATaGCCGGAACACCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNAFLHQQ*PEHQSA
Trigger: GGCGCTTTGGTGTTCCGGTCATTGCTGATGGAGGAA...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp CTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCATCTGTTCTGGCTGCTaGGGTGCTTGTCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: LPIRPVSVIGIPQKPCRAICSGC*GACPWH
Trigger: ATGCCATGGACAAGCACCTCAGCAGCCAGAACAGAT...GGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp CCGCCTGTAAGCGCCATTGCTATGGCCATCCCAGCCTCTGTGACTGTGTCCATGCCGCAGTTGAAGAGCTaGTGTGCTGTGAGTCCGTCG +
Preference number: 4 (lower is better)
Translates to: PPVSAIAMAIPASVTVSMPQLKS*CAVSPS
Trigger: CGACGGACTCACAGCACAGCAGCTCTTCAACTGCGG...CATGGACACAGTCACAGAGGCTGGGATGGCCATAGCAATGGCGCTTACAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679117.1
CDS-3UTR GCA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGACTTCAGTGTGATGCCTaGAGGGGCTACCACCAAGTC +
Preference number: 4 (lower is better)
Translates to: GIPQKPCRALASKTSRTRLQCDA*RGYHQV
Trigger: GACTTGGTGGTAGCCCCTGCAGGCATCACACTGAAG...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTTGGAGCCACTTCCCATaGCCACCCGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPWSHFP*PPAGHP
Trigger: TGGATGCCCTGCGGGTGGGCATGGGAAGTGGCTCCA...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GCCCACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAATTGACCCTTTGTCCTaGACAGCACCAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: AHQAAPHPACVCDWDTAEIDPLS*TAPDTP
Trigger: GGGAGTGTCTGGTGCTGTGCAGGACAAAGGGTCAAT...TTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGAAACCATGCCGGGCCTTaGCCTCAAAAACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GIPQKPCRALASKTSRTRNHAGP*PQKHPA
Trigger: TGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTT...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCAAACCATGCCGGGCCTTaGCCTCAAAAACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNANHAGP*PQKHPA
Trigger: TGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTT...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCTACACTGCTGTTGCTTaGGGCCGCCCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EFPWEESKTTTSTPAWASYTAVA*GRPQAS
Trigger: GCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTA...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCATGTCATCCTCATGAGTaGCAATGGCTGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNACHPHE*QWLPHT
Trigger: TGTGTGGGGCAGCCATTGGCACTCATGAGGATGACA...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCCCCCAGAGTACATCATaGCTCGGACTTGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAIPQSTS*LGLGSS
Trigger: GCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp ACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATACGAATGGAGGCTATaGACGCCACCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TKRLPIRPVSVIGIPQKPYEWRL*TPPSTW
Trigger: CCAGGTGGAAGGTGGCGTCCATAGCCTCCATTCGTA...TGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 72 bp TCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTaGGCCTCAAAAACATCCCGCACGCGATCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVIGIPQKPCRA*ASKTSRTRSLG
Trigger: CCCCAAGGATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 72 bp ACCCGCAGGGCATCCACACCTGCATCAATGAGGTTCTaGGCCTGGGCAGCAGTGACCACATTGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: TRRASTPASMRF*AWAAVTTLPPM
Trigger: CATTGGAGGCAATGTGGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGCAGGTGTGGATGCCCTGCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAATCCGGCCTGTGTCTGTaGTTGGGATACCGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKSGLCL*LGYRRN
Trigger: GTTTCTGCGGTATCCCAATCACAGACACAGGCCGGA...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAGGTCTGTCCGGGCAATaGTGGCCACAAGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKGLSGQ*WPQAHH
Trigger: ATGATGAGCTTGTGGCCATCATTGCCCGGACAGACC...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCACCTTCCACCTGGGCTaGGGACGTTCTCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAITFHLG*GRSLLK
Trigger: TTTGAGAAGAGAACGTCCTCAGCCCAGGTGGAAGGT...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCGCCTGTAAGCGCCATTaGTATGGCCATCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EFPWEESKTTTSTPAWASACKRH*YGHPSL
Trigger: GAGGCTGGGATGGCCATAGCAATGGCGCTTACAGGC...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTACATCCACACCAGCCTaGGCGAGCAAGTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPTSTPA*ASKSSL
Trigger: TAGGCTGGACTTGCTCGCCCAGGCTGGTGTGGATGT...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCCTTGGGTCAAGCTCTTaGCACCAATGTCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAILGSSS*HQCPGM
Trigger: CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAG...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTACGCCACCTTCCACCTaGGCTGAGGACGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPTPPST*AEDVLF
Trigger: GAAGAGAACGTCCTCAGCCCAGGTGGAAGGTGGCGT...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGAGAGCTGCTGTGCTGTaGGTCCGTCGTCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWRAAVL*VRRLAR
Trigger: ACGTGCCAGACGACGGACTCACAGCACAGCAGCTCT...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGTTGCCTCCTTCAGTGTaGTGCCTGCAGGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMLPPSV*CLQGLP
Trigger: TGGTAGCCCCTGCAGGCATCACACTGAAGGAGGCAA...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCGGTCTGTCCGGGCAATaGTGGCCACAAGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: EFPWEESKTTTSTPAWASGLSGQ*WPQAHH
Trigger: ATGATGAGCTTGTGGCCATCATTGCCCGGACAGACC...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCACCAATGTCCTGGCATaGGTGTTGGATGCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAITNVLA*VLDASN
Trigger: ATTGCTGGCATCCAACACTCATGCCAGGACATTGGT...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGCCGCAGTTGAAGAGCTaGTGTGCTGTGAGTCCGTCG +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMPQLKS*CAVSPS
Trigger: CGACGGACTCACAGCACAGCAGCTCTTCAACTGCGG...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAATACCGCAGAAACCATaGCGGGCCTTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKIPQKP*RALASK
Trigger: TTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTAT...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCCTTCAGTGTGATGCCTaGAGGGGCTACCACCAAGTC +
Preference number: 4 (lower is better)
Translates to: EFPWEESKTTTSTPAWASLQCDA*RGYHQV
Trigger: GACTTGGTGGTAGCCCCTGCAGGCATCACACTGAAG...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAATTGACCCTTTGTCCTaGACAGCACCAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKIDPLS*TAPDTP
Trigger: GGGAGTGTCTGGTGCTGTGCAGGACAAAGGGTCAAT...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCTCAGGTAGTCGGCCATaGCCAACACAGGACACCGCC +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHILDSSISSGSRP*PTQDTA
Trigger: GGCGGTGTCCTGTGTTGGCCATGGCCGACTACCTGA...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GCCCACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAGGGAGAGGAAACCAGTaGGGTCTTAAGAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: AHQAAPHPACVCDWDTAEGRGNQ*GLKSDF
Trigger: AAAATCACTCTTAAGACCCCACTGGTTTCCTCTCCC...TTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCATCAGGTGTACAGTTGTaGTGGATGAAGCCAATACCG +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNASGVQL*WMKPIP
Trigger: CGGTATTGGCTTCATCCACCACAACTGTACACCTGA...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCCGAACTTCATTGGCCTaGAATTCAGGTGTACAGTTG +
Preference number: 4 (lower is better)
Translates to: LPIRPVSVIGIPQKPCRARTSLA*NSGVQL
Trigger: CAACTGTACACCTGAATTCCAGGCCAATGAAGTTCG...GGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCGCCTGTGTCTGTGATTaGGATACCGCAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAIACVCD*DTAETM
Trigger: CATGGTTTCTGCGGTATCCCAATCACAGACACAGGC...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATTCCGGCCTGTGTCTGTaGTTGGGATACCGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHSGLCL*LGYRRN
Trigger: GTTTCTGCGGTATCCCAATCACAGACACAGGCCGGA...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp CTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCAAGGCTTTCGCAATATaGCCCACATTTTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LPIRPVSVIGIPQKPCRAKAFAI*PTFWIP
Trigger: AGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTT...GGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCTGTTCTGGCTGCTaGGGTGCTTGTCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSICSGC*GACPWH
Trigger: ATGCCATGGACAAGCACCTCAGCAGCCAGAACAGAT...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCGCCTGTAAGCGCCATTaGTATGGCCATCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHILDSSISACKRH*YGHPSL
Trigger: GAGGCTGGGATGGCCATAGCAATGGCGCTTACAGGC...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGAGCAACTTTCCCTTCTTaGTGCGCTGCAGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: GIPQKPCRALASKTSRTRATFPS*CAAEFH
Trigger: ATGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGC...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGAAAAACCGAGGAGGTGTaGTGGATCCCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GIPQKPCRALASKTSRTRKTEEV*WIPFQK
Trigger: TTTCTGAAAAGGGATCCAGCACACCTCCTCGGTTTT...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCACTTTCCGAACTTCATTaGCCTGGAATTCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNALSELH*PGIQVY
Trigger: GTACACCTGAATTCCAGGCCAATGAAGTTCGGAAAG...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCCTTGGGTCAAGCTCTTaGCACCAATGTCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSLGSSS*HQCPGM
Trigger: CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAG...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTATCATGGCTCGGACTTaGGTCAAGCTCTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPIMART*VKLLAP
Trigger: TGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGAT...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp TGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACCCCCAGAGTACATCATaGCTCGGACTTGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CVCDWDTAETMPGLGLKNPQSTS*LGLGSS
Trigger: GCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG...GTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGTACGAATGGAGGCTATaGACGCCACCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMYEWRL*TPPSTW
Trigger: CCAGGTGGAAGGTGGCGTCCATAGCCTCCATTCGTA...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 72 bp CCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTaGGCACCAATGTCCTGGCATGAGTGTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PEYIMARTWVKL*APMSWHECWMP
Trigger: TGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGTTCCTCCATCAGCAATaGCCGGAACACCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWFLHQQ*PEHQSA
Trigger: GGCGCTTTGGTGTTCCGGTCATTGCTGATGGAGGAA...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCACCAATGTCCTGGCATaGGTGTTGGATGCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: EFPWEESKTTTSTPAWASTNVLA*VLDASN
Trigger: ATTGCTGGCATCCAACACTCATGCCAGGACATTGGT...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGATACCGCAGAAACCATaGCGGGCCTTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMIPQKP*RALASK
Trigger: TTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTAT...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCGCAACTTTCCCTTCTTaGTGCGCTGCAGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAIATFPS*CAAEFH
Trigger: ATGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGC...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGTGTCATCCTCATGAGTaGCAATGGCTGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMCHPHE*QWLPHT
Trigger: TGTGTGGGGCAGCCATTGGCACTCATGAGGATGACA...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGGAAGTCAGGTCCACCTaGTCTGCAGTGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMEVRST*SAVKSM
Trigger: CATCGACTTCACTGCAGACCAGGTGGACCTGACTTC...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677480.1
CDS-3UTR CCA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCGGGAGAGGAAACCAGTaGGGTCTTAAGAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: DTAETMPGLGLKNIPHAIGRGNQ*GLKSDF
Trigger: AAAATCACTCTTAAGACCCCACTGGTTTCCTCTCCC...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp TTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAAGGTTTCTTGGCATCTTTaGAGGCTAGTGGGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: FPWEESKTTTSTPAWASKVSWHL*RLVGSP
Trigger: GGGACTACCCACTAGCCTCCAAAGATGCCAAGAAAC...CTTGCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTACACTGCTGTTGCTTaGGGCCGCCCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PDTPWATLILSASLKYLFYTAVA*GRPQAS
Trigger: GCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTA...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp TTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAAGTTGGCACCAATGTCCTaGCATGAGTGTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: FPWEESKTTTSTPAWASKLAPMS*HECWMP
Trigger: TGGCATCCAACACTCATGCCAGGACATTGGTGCCAA...CTTGCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp ACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATTTTGTCAGCTTCACTaGAATATCTGTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TKRLPIRPVSVIGIPQKPFCQLH*NICSGC
Trigger: GCAGCCAGAACAGATATTTCAGTGAAGCTGACAAAA...TGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCTTCTGGCTGCTGAGGTaGTTGTCCATGGCATCGAGA +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHILDSSISFWLLR*LSMASR
Trigger: TCTCGATGCCATGGACAAGCACCTCAGCAGCCAGAA...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGGTGTACAGTTGTGGTaGATGAAGCCAATACCGCCT +
Preference number: 4 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHGVQLW*MKPIPP
Trigger: AGGCGGTATTGGCTTCATCCACCACAACTGTACACC...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACAGTTTCTTGGCATCTTTaGAGGCTAGTGGGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: VSVIGIPQKPCRALASKTVSWHL*RLVGSP
Trigger: GGGACTACCCACTAGCCTCCAAAGATGCCAAGAAAC...TGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CATCGAGAGAACCCATACCGCGATATTTCTTTAGCCGGATCCCATCGGAAAAGAACATCCACACCAGCCTaGGCGAGCAAGTCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HRENPYRDISLAGSHRKRTSTPA*ASKSSL
Trigger: TAGGCTGGACTTGCTCGCCCAGGCTGGTGTGGATGT...TCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGGCACCAGACACTCCCTaGGCCACTTTGATTTTGTCA +
Preference number: 4 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMAPDTP*ATLILS
Trigger: TGACAAAATCAAAGTGGCCCAGGGAGTGTCTGGTGC...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGATCATGGCTCGGACTTaGGTCAAGCTCTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWIMART*VKLLAP
Trigger: TGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGAT...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAAGGCTTTCGCAATATaGCCCACATTTTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKKAFAI*PTFWIP
Trigger: AGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTT...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGCTTGTACACTGCTGTTaGTTGGGGCCGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLLVHCC*LGPPTG
Trigger: GCCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAG...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp TTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAAGGTTCATATTTCTCAGTaGAATTCCCAGGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: FPWEESKTTTSTPAWASKVHISQ*NSQERL
Trigger: CAAGCGCTCCTGGGAATTGCACTGAGAAATATGAAC...CTTGCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677480.1
CDS-3UTR CCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGGGTGTACAGTTGTGGTaGATGAAGCCAATACCGCCT +
Preference number: 4 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWGVQLW*MKPIPP
Trigger: AGGCGGTATTGGCTTCATCCACCACAACTGTACACC...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCCTTTCCGAACTTCATTaGCCTGGAATTCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSLSELH*PGIQVY
Trigger: GTACACCTGAATTCCAGGCCAATGAAGTTCGGAAAG...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCATTGATCATATTGATCTaGAAGATGGAATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNALIILI*KMEFPW
Trigger: CCAGGGAAATTCCATCTTCCAGATCAATATGATCAA...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCTTGGCACCAATGTCCTaGCATGAGTGTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHILDSSISLAPMS*HECWMP
Trigger: TGGCATCCAACACTCATGCCAGGACATTGGTGCCAA...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTTTTTGTCAGCTTCACTaGAATATCTGTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPFCQLH*NICSGC
Trigger: GCAGCCAGAACAGATATTTCAGTGAAGCTGACAAAA...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGGACAAATTTGTGGATTaGCCCTTTGTCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWDKFVD*PFVLHS
Trigger: GCTGTGCAGGACAAAGGGTCAATCCACAAATTTGTC...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCGACAAATTTGTGGATTaGCCCTTTGTCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHILDSSISDKFVD*PFVLHS
Trigger: GCTGTGCAGGACAAAGGGTCAATCCACAAATTTGTC...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp CATCGAGAGAACCCATACCGCGATATTTCTTTAGCCGGATCCCATCGGAAAAGAATGAGTGCCAATGGCTaGCCCACACAGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HRENPYRDISLAGSHRKRMSANG*PTQQLF
Trigger: AAACAGCTGCTGTGTGGGGCAGCCATTGGCACTCAT...TCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCCTTGCTAATGATCGTTaGCCTTCTGACCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSLANDR*PSDLHF
Trigger: AAAGTGAAGGTCAGAAGGGCAACGATCATTAGCAAG...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677480.1
3UTR CAA 72 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTaGGATTCCTCCATCAGCAATGACCGGAACACCAAA +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHI*DSSISNDRNTK
Trigger: TTTGGTGTTCCGGTCATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTTTGATCATATTGATCTaGAAGATGGAATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPLIILI*KMEFPW
Trigger: CCAGGGAAATTCCATCTTCCAGATCAATATGATCAA...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp AGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCTGGAGCCACTTCCCATaGCCACCCGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: RVFVFDVLDHIDLEDGISWSHFP*PPAGHP
Trigger: TGGATGCCCTGCGGGTGGGCATGGGAAGTGGCTCCA...GGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCTTGCCTCCAATGACTTaGAGATTAGGGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: PKGQGFRNMTHILDSSISLPPMT*RLGYLS
Trigger: AGACAAATACCCTAATCTCCAAGTCATTGGAGGCAA...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 72 bp GGCCTGGGCAGCAGTGACCACATTGCCTCCAATGACTaGGAGATTAGGGTATTTGTCTTTGATGTACTTGAT +
Preference number: 4 (lower is better)
Translates to: GLGSSDHIASND*EIRVFVFDVLD
Trigger: ATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGCCCAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCAAAACCGAGGAGGTGTaGTGGATCCCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PDTPWATLILSASLKYLFKTEEV*WIPFQK
Trigger: TTTCTGAAAAGGGATCCAGCACACCTCCTCGGTTTT...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGTCAGGTGTACAGTTGTaGTGGATGAAGCCAATACCG +
Preference number: 4 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLSGVQL*WMKPIP
Trigger: CGGTATTGGCTTCATCCACCACAACTGTACACCTGA...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGCGAACTTCATTGGCCTaGAATTCAGGTGTACAGTTG +
Preference number: 4 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLRTSLA*NSGVQL
Trigger: CAACTGTACACCTGAATTCCAGGCCAATGAAGTTCG...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR TCA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAACCTTCCACCTGGGCTaGGGACGTTCTCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLETFHLG*GRSLLK
Trigger: TTTGAGAAGAGAACGTCCTCAGCCCAGGTGGAAGGT...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR GCA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAATGAGTGCCAATGGCTaGCCCACACAGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLEMSANG*PTQQLF
Trigger: AAACAGCTGCTGTGTGGGGCAGCCATTGGCACTCAT...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
3UTR CAA 72 bp TTGCCTCCAATGACTTGGAGATTAGGGTATTTGTCTTaGATGTACTTGATCATATTGATCTGGAAGATGGAA +
Preference number: 4 (lower is better)
Translates to: LPPMTWRLGYLS*MYLIILIWKME
Trigger: TTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CCA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAATTGCCTCCAATGACTTaGAGATTAGGGTATTTGTCT +
Preference number: 4 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLELPPMT*RLGYLS
Trigger: AGACAAATACCCTAATCTCCAAGTCATTGGAGGCAA...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 90 bp CCCAAGCACCGCTCCAGATGTCTCAAAGTGAGCCCCGGAGGTGGGTaGCCAATTCCCGAAACCTGTCCCCCACGCCCACGCCCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: PKHRSRCLKVSPGGG*PIPETCPPRPRPRR
Trigger: CCGCCTTGGGCGTGGGCGTGGGGGACAGGTTTCGGGAATTGGCCACCCACCTCCGGGGCTCACTTTGAGACATCTGGAGCGGTGCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS CCA 90 bp AGGGAGGGGGTCCCACTGGCCTTCACGGGTACTGGGCCTCACCTGTaGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTT +
Preference number: 5 (lower is better)
Translates to: REGVPLAFTGTGPHL*RPQGPRLSQYDPHF
Trigger: AAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCCACAGGTGAGGCCCAGTACCCGTGAAGGCCAGTGGGACCCCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678177.1
CDS-3UTR CAA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAGTACACTGCTGTTGCTaGGGGCCGCCCACAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKVHCCC*GPPTGQ
Trigger: CTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 90 bp ACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTGTTGAGATaGAGGAACACATGGGTGGATAGGGTTAATGGGGACGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: TLLLLGAAHRPALLR*RNTWVDRVNGDGQW
Trigger: CCACTGCCCGTCCCCATTAACCCTATCCACCCATGTGTTCCTCCATCTCAACAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS-3UTR CAA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGTCCCGCACGCGATCCTaGGGGCTGAGGACCACAGGG +
Preference number: 5 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMSRTRS*GLRTTG
Trigger: CCCTGTGGTCCTCAGCCCCAAGGATCGCGTGCGGGA...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS TCA 90 bp CTTGTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTGTTaGGATGGAGGAACACATGGGTGGATAGGGTTAATGGGGACGGGC +
Preference number: 5 (lower is better)
Translates to: LVHCCCLGPPTGQHC*DGGTHGWIGLMGTG
Trigger: GCCCGTCCCCATTAACCCTATCCACCCATGTGTTCCTCCATCTCAACAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp ACCAGCCCCTCTACCCATGTCCCAGCTCCCCAAGCTCACCGGACTTaGGTCAAGCTCTTGGCACCAATGTCCTGGCATGAGTGTTGGATG +
Preference number: 5 (lower is better)
Translates to: TSPSTHVPAPQAHRT*VKLLAPMSWHECWM
Trigger: CATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGGTGAGCTTGGGGAGCTGGGACATGGGTAGAGGGGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000463903.1
ENST00000466147.5
ENST00000472328.2
ENST00000481274.1
ENST00000491610.2
ENST00000677108.1
ENST00000677344.1
ENST00000677593.1
ENST00000677740.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp GGCAGAGGCCCCACCAAGGACAGGGTGACTTACGAATGGAGGCTATaGACGCCACCTTCCACCTGGGCTGAGGACGTTCTCTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GRGPTKDRVTYEWRL*TPPSTWAEDVLFSN
Trigger: GTTTGAGAAGAGAACGTCCTCAGCCCAGGTGGAAGGTGGCGTCCATAGCCTCCATTCGTAAGTCACCCTGTCCTTGGTGGGGCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466147.5
ENST00000484872.1
ENST00000676864.1
ENST00000678085.1
ENST00000678177.1
CDS CCA 90 bp AGGACCACCTGTGAGGTGAGGGCAGGAGAAAGGAGGCATGAGGTATaGCAGAGGCCCCACCAAGGACAGGGTGACTTACGAATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RTTCEVRAGERRHEV*QRPHQGQGDLRMEA
Trigger: AGCCTCCATTCGTAAGTCACCCTGTCCTTGGTGGGGCCTCTGCCATACCTCATGCCTCCTTTCTCCTGCCCTCACCTCACAGGTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466147.5
ENST00000484872.1
ENST00000676864.1
ENST00000678085.1
ENST00000678177.1
CDS-3UTR CAA 90 bp GCCCACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAGCAGCAGTGACCACATaGCCTCCAATGACTTGGAGA +
Preference number: 5 (lower is better)
Translates to: AHQAAPHPACVCDWDTAEAAVTT*PPMTWR
Trigger: TCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGC...TTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCCCTTGTACACTGCTGTaGCTTGGGGCCGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSPCTLL*LGAAHR
Trigger: CCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAGG...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 90 bp CCCATGTCCCAGCTCCCCAAGCTCACCGGACTTGGGTCAAGCTCTTaGCACCAATGTCCTGGCATGAGTGTTGGATGCCAGCAATCAGGT +
Preference number: 5 (lower is better)
Translates to: PMSQLPKLTGLGSSS*HQCPGMSVGCQQSG
Trigger: ACCTGATTGCTGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGGTGAGCTTGGGGAGCTGGGACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000463903.1
ENST00000466147.5
ENST00000472328.2
ENST00000481274.1
ENST00000491610.2
ENST00000677108.1
ENST00000677344.1
ENST00000677593.1
ENST00000677740.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp GGGTACAGGGGACCTTTTCTGCCACCGAGCTGTCATCAGTGCTCCTaGCACCCTGACAATTCCATGTGTCTGGAGCATGGAATCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GYRGPFLPPSCHQCS*HPDNSMCLEHGISG
Trigger: GCCGGAGATTCCATGCTCCAGACACATGGAATTGTCAGGGTGCCAGGAGCACTGATGACAGCTCGGTGGCAGAAAAGGTCCCCTGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS-3UTR CAA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAGCATCAATGAGGTTCTaGGCCTGGGCAGCAGTGACC +
Preference number: 5 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKASMRF*AWAAVT
Trigger: GGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGC...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 90 bp GACGGGCAGTGGACCCTGTGGCCATATTTAGGACCCAGGAGCTTTTaGCTACATCTGCATCAGGACTGCAGCTTGGCTGAGGAACAGACG +
Preference number: 5 (lower is better)
Translates to: DGQWTLWPYLGPRSF*LHLHQDCSLAEEQT
Trigger: CGTCTGTTCCTCAGCCAAGCTGCAGTCCTGATGCAGATGTAGCCAAAAGCTCCTGGGTCCTAAATATGGCCACAGGGTCCACTGCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS-3UTR CAA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTAAACCATGCCGGGCCTaGGCCTCAAAAACATCCCGC +
Preference number: 5 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPKPCRA*ASKTSR
Trigger: GCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTT...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTTCCTGCGTAATGCAACTCCCTGGGCCACTTaGATTTTGTCAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: VHCCCLGPPTGQHFLRNATPWAT*ILSASL
Trigger: CAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGT...TGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp ACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATTGTGGATTGACCCTTaGTCCTGCACAGCACCAGAC +
Preference number: 5 (lower is better)
Translates to: TKRLPIRPVSVIGIPQKPLWIDP*SCTAPD
Trigger: GTCTGGTGCTGTGCAGGACAAAGGGTCAATCCACAA...TGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS TCA 90 bp AGGAGCAAGAAGGCCAGGCTAGGCAAGGGAGTGGCAGGTGATGGATaGCAAGACCTTGTCTTGCTTCCAGCCATGTCACCCATCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RSKKARLGKGVAGDG*QDLVLLPAMSPIQE
Trigger: CTCTTGGATGGGTGACATGGCTGGAAGCAAGACAAGGTCTTGTCATCCATCACCTGCCACTCCCTTGCCTAGCCTGGCCTTCTTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS TCA 90 bp GTCCTGCCCTATCAGCACCCCAGAAGGAAGAGGGAGCTATGTTCTTaGGCACCACCCCCAAACCATGGTCTGTGTATCAGTTGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: VLPYQHPRRKRELCS*APPPNHGLCISWPC
Trigger: GCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAACATAGCTCCCTCTTCCTTCTGGGGTGCTGATAGGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS GCA 90 bp TCACAGGCACAGCACAAGGTGGAAATGGGTACAGGGGACCTTTTCTaGCACCGAGCTGTCATCAGTGCTCCTGGCACCCTGACAATTCCA +
Preference number: 5 (lower is better)
Translates to: SQAQHKVEMGTGDLF*HRAVISAPGTLTIP
Trigger: TGGAATTGTCAGGGTGCCAGGAGCACTGATGACAGCTCGGTGGCAGAAAAGGTCCCCTGTACCCATTTCCACCTTGTGCTGTGCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS-3UTR CAA 90 bp ACCAAGCGGCTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCAGGCAACTTTCCCTTCTaGCTGCGCTGCAGAATTTCA +
Preference number: 5 (lower is better)
Translates to: TKRLPIRPVSVIGIPQKPGNFPF*LRCRIS
Trigger: TGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGCC...TGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATCGCATACTCTGACACCTaGTACACTGCTGTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: DTAETMPGLGLKNIPHAIAYSDT*YTAVAW
Trigger: CCAAGCAACAGCAGTGTACAAGGTGTCAGAGTATGC...GATCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCTGGCTGCTGAGGTGCTaGTCCATGGCATCGAGAGAA +
Preference number: 5 (lower is better)
Translates to: EFPWEESKTTTSTPAWASWLLRC*SMASRE
Trigger: TTCTCTCGATGCCATGGACAAGCACCTCAGCAGCCA...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS GCA 90 bp CTGGAGCATGGAATCTCCGGCCTGAGATTCCAAGCACTACTGAGATaGTTCTCCGTACCCCAAGCACCGCTCCAGATGTCTCAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: LEHGISGLRFQALLR*FSVPQAPLQMSQSE
Trigger: CTCACTTTGAGACATCTGGAGCGGTGCTTGGGGTACGGAGAAGCATCTCAGTAGTGCTTGGAATCTCAGGCCGGAGATTCCATGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS GCA 90 bp GGAAATGGGTACAGGGGACCTTTTCTGCCACCGAGCTGTCATCAGTaGTCCTGGCACCCTGACAATTCCATGTGTCTGGAGCATGGAATC +
Preference number: 5 (lower is better)
Translates to: GNGYRGPFLPPSCHQ*SWHPDNSMCLEHGI
Trigger: GATTCCATGCTCCAGACACATGGAATTGTCAGGGTGCCAGGAGCACTGATGACAGCTCGGTGGCAGAAAAGGTCCCCTGTACCCATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS GCA 90 bp TCCCTGAACTATGCCTACTGCAGAAGATGTGGGCAGAAAAGGTCCTaGCTAGGGAAGAAGGTCCTGCCCTATCAGCACCCCAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SLNYAYCRRCGQKRS*LGKKVLPYQHPRRK
Trigger: CTTCCTTCTGGGGTGCTGATAGGGCAGGACCTTCTTCCCTAGGCAGGACCTTTTCTGCCCACATCTTCTGCAGTAGGCATAGTTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS GCA 90 bp CCATATTTAGGACCCAGGAGCTTTTGGCTACATCTGCATCAGGACTaGAGCTTGGCTGAGGAACAGACGTGTCTGGGATGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PYLGPRSFWLHLHQD*SLAEEQTCLGWLLP
Trigger: TGGCAGCAGCCATCCCAGACACGTCTGTTCCTCAGCCAAGCTGCAGTCCTGATGCAGATGTAGCCAAAAGCTCCTGGGTCCTAAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp AGAGTGGCACTGACAGAGTCTGTGTGTCACAGGCACAGCACAAGGTaGAAATGGGTACAGGGGACCTTTTCTGCCACCGAGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: RVALTESVCHRHSTR*KWVQGTFSATELSS
Trigger: TGATGACAGCTCGGTGGCAGAAAAGGTCCCCTGTACCCATTTCCACCTTGTGCTGTGCCTGTGACACACAGACTCTGTCAGTGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677740.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS-3UTR CAA 90 bp GCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAGGCAACTTTCCCTTCTaGCTGCGCTGCAGAATTTCA +
Preference number: 5 (lower is better)
Translates to: ACVCDWDTAETMPGLGLKGNFPF*LRCRIS
Trigger: TGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGCC...TTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CTCCCCATCCGGCCTGTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCATTGCCTCCAATGACTaGGAGATTAGGGTATTTGTC +
Preference number: 5 (lower is better)
Translates to: LPIRPVSVIGIPQKPCRAIASND*EIRVFV
Trigger: GACAAATACCCTAATCTCCAAGTCATTGGAGGCAAT...GGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CATCGAGAGAACCCATACCGCGATATTTCTTTAGCCGGATCCCATCGGAAAAGACCTTGTACACTGCTGTaGCTTGGGGCCGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: HRENPYRDISLAGSHRKRPCTLL*LGAAHR
Trigger: CCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAGG...TCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATGGCTGCTGAGGTGCTaGTCCATGGCATCGAGAGAA +
Preference number: 5 (lower is better)
Translates to: VSVIGIPQKPCRALASKTWLLRC*SMASRE
Trigger: TTCTCTCGATGCCATGGACAAGCACCTCAGCAGCCA...TGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGCATCATGGCTCGGACTaGGGTCAAGCTCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWHHGSD*GQALGT
Trigger: GGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATG...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS TCA 90 bp CCATGTACCAATCAACCCGTAACGCATGTGAGCAGAGAGTGGCACTaGCAGAGTCTGTGTGTCACAGGCACAGCACAAGGTGGAAATGGG +
Preference number: 5 (lower is better)
Translates to: PCTNQPVTHVSREWH*QSLCVTGTAQGGNG
Trigger: CCCATTTCCACCTTGTGCTGTGCCTGTGACACACAGACTCTGTCAGTGCCACTCTCTGCTCACATGCGTTACGGGTTGATTGGTACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677740.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS CCA 90 bp AACACATGGGTGGATAGGGTTAATGGGGACGGGCAGTGGACCCTGTaGCCATATTTAGGACCCAGGAGCTTTTGGCTACATCTGCATCAG +
Preference number: 5 (lower is better)
Translates to: NTWVDRVNGDGQWTL*PYLGPRSFWLHLHQ
Trigger: CTGATGCAGATGTAGCCAAAAGCTCCTGGGTCCTAAATATGGCCACAGGGTCCACTGCCCGTCCCCATTAACCCTATCCACCCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp AGATGGAGGAACACATGGGTGGATAGGGTTAATGGGGACGGGCAGTaGACCCTGTGGCCATATTTAGGACCCAGGAGCTTTTGGCTACAT +
Preference number: 5 (lower is better)
Translates to: RWRNTWVDRVNGDGQ*TLWPYLGPRSFWLH
Trigger: ATGTAGCCAAAAGCTCCTGGGTCCTAAATATGGCCACAGGGTCCACTGCCCGTCCCCATTAACCCTATCCACCCATGTGTTCCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp CAGAAGGAAGAGGGAGCTATGTTCTTGAGCACCACCCCCAAACCATaGTCTGTGTATCAGTTGGCCTTGCCCACCCATCAGCACCACAAA +
Preference number: 5 (lower is better)
Translates to: QKEEGAMFLSTTPKP*SVYQLALPTHQHHK
Trigger: TTTGTGGTGCTGATGGGTGGGCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAACATAGCTCCCTCTTCCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 90 bp GCTATCAGAGATGTCTTAGACAACAGAAGCCCCTTGTCTTCAACCTaGGCTGCTAGAGCTTGGATCTACTCTGCCAGTGGCACCCACCTC +
Preference number: 5 (lower is better)
Translates to: AIRDVLDNRSPLSST*AARAWIYSASGTHL
Trigger: GAGGTGGGTGCCACTGGCAGAGTAGATCCAAGCTCTAGCAGCCCAGGTTGAAGACAAGGGGCTTCTGTTGTCTAAGACATCTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS-3UTR CAA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATTAAGAGTGATTTTCTaGGTCAGAGCAGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GIPQKPCRALASKTSRTRLRVIF*VRAEVR
Trigger: CCTGACTTCTGCTCTGACCAAGAAAATCACTCTTAA...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCGCATACTCTGACACCTaGTACACTGCTGTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: EFPWEESKTTTSTPAWASAYSDT*YTAVAW
Trigger: CCAAGCAACAGCAGTGTACAAGGTGTCAGAGTATGC...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATACTTGGGTCAAGCTCTaGGCACCAATGTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHTWVKL*APMSWH
Trigger: ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGT...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS TCA 90 bp TGGGCAGCAGTGACCACTATGGTGAAGGAAAGGAAAATGCTCATGTaGAGGTTAAGGTGGGAGCCCAGCTTACCCACTCCCACCACACAT +
Preference number: 5 (lower is better)
Translates to: WAAVTTMVKERKMLM*RLRWEPSLPTPTTH
Trigger: ATGTGTGGTGGGAGTGGGTAAGCTGGGCTCCCACCTTAACCTTCACATGAGCATTTTCCTTTCCTTCACCATAGTGGTCACTGCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS GCA 90 bp CACCCCACCTCAGTGCAATTCCCAGGAGCGCTTGCTAATGATCGTTaGCCTTCTGACCTTCACTTTCCGAACTTCATTGGCCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: HPTSVQFPGALANDR*PSDLHFPNFIGLEF
Trigger: GAATTCCAGGCCAATGAAGTTCGGAAAGTGAAGGTCAGAAGGGCAACGATCATTAGCAAGCGCTCCTGGGAATTGCACTGAGGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000462980.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS CCA 90 bp CACACAAAGGAGTTGGTCCCTGAACTATGCCTACTGCAGAAGATGTaGGCAGAAAAGGTCCTGCCTAGGGAAGAAGGTCCTGCCCTATCA +
Preference number: 5 (lower is better)
Translates to: HTKELVPELCLLQKM*AEKVLPREEGPALS
Trigger: TGATAGGGCAGGACCTTCTTCCCTAGGCAGGACCTTTTCTGCCCACATCTTCTGCAGTAGGCATAGTTCAGGGACCAACTCCTTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS-3UTR CAA 90 bp ACCGAGGAGGTGTGCTGGATCCCTTTTCAGAAAAGCCGCTTCTCATACGAATGGGCAGCAGTGACCACATaGCCTCCAATGACTTGGAGA +
Preference number: 5 (lower is better)
Translates to: TEEVCWIPFQKSRFSYEWAAVTT*PPMTWR
Trigger: TCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGC...CCATTCGTATGAGAAGCGGCTTTTCTGAAAAGGGATCCAGCACACCTCCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACATCCCGCACGCGATGGGCCACTTTGATTTaGTCAGCTTCACTGAAATAT +
Preference number: 5 (lower is better)
Translates to: GIPQKPCRALASKTSRTRWATLI*SASLKY
Trigger: ATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCA...TCGCGTGCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCACTTTCCGAACTTCATaGGCCTGGAATTCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSTFRTS*AWNSGV
Trigger: TACACCTGAATTCCAGGCCAATGAAGTTCGGAAAGT...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCAATTCCCAGGAGCGCTaGCTAATGATCGTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: PKGQGFRNMTHILDSSISNSQER*LMIVAL
Trigger: AAGGGCAACGATCATTAGCAAGCGCTCCTGGGAATT...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677480.1
CDS TCA 90 bp GGGGTCTTAAGAGTGATTTTCTTGGTCAGAGCAGAAGTCAGGTCCTaGGGAGACAAACGTCAACCAGTGTGGGAAAGCATCCCTTACACC +
Preference number: 5 (lower is better)
Translates to: GVLRVIFLVRAEVRS*GDKRQPVWESIPYT
Trigger: GGTGTAAGGGATGCTTTCCCACACTGGTTGACGTTTGTCTCCTCAGGACCTGACTTCTGCTCTGACCAAGAAAATCACTCTTAAGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000485500.1
ENST00000676607.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677740.1
ENST00000677991.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS-3UTR CAA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCAATTCAGGTGTACAGTaGTGGTGGATGAAGCCAATA +
Preference number: 5 (lower is better)
Translates to: EFPWEESKTTTSTPAWASNSGVQ*WWMKPI
Trigger: TATTGGCTTCATCCACCACAACTGTACACCTGAATT...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGAAACCATGCCGGGCCTaGGCCTCAAAAACATCCCGC +
Preference number: 5 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLKPCRA*ASKTSR
Trigger: GCGGGATGTTTTTGAGGCCAAGGCCCGGCATGGTTT...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CCCCAGAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTTCATGTTCCTCCTCTTaGAGAAAATCAATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PQSTSWLGLGSSSWHQCPSCSSS*RKSMSL
Trigger: CAGGGACATTGATTTTCTCAAAGAGGAGGAACATGA...AGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGCATCATGGCTCGGACTaGGGTCAAGCTCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLHHGSD*GQALGT
Trigger: GGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATG...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS TCA 90 bp CTACAGGATAAAAAGAGACTACTACTAAGTGACAAGAAGCAGGACTaGATGCCTTTGGGGAAAGGCGATGGAGTCCTTGCTCCTTCCCCC +
Preference number: 5 (lower is better)
Translates to: LQDKKRLLLSDKKQD*MPLGKGDGVLAPSP
Trigger: GGGGGAAGGAGCAAGGACTCCATCGCCTTTCCCCAAAGGCATTCAGTCCTGCTTCTTGTCACTTAGTAGTAGTCTCTTTTTATCCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000462980.2
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678920.1
CDS TCA 90 bp GGTGAGAAAGGGCATCGCATCTTTGAACTACTTTCATCAGGCTCTTaGTCTGAAGCATGGGGTCTCTGCTTATCGATCCCTTTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GEKGHRIFELLSSGS*SEAWGLCLSIPLAV
Trigger: CACTGCCAAAGGGATCGATAAGCAGAGACCCCATGCTTCAGATCAAGAGCCTGATGAAAGTAGTTCAAAGATGCGATGCCCTTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000462980.2
ENST00000491610.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS-3UTR CAA 90 bp AGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATGTTAAGAGTGATTTTCTaGGTCAGAGCAGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: STSWLGLGSSSWHQCPGMLRVIF*VRAEVR
Trigger: CCTGACTTCTGCTCTGACCAAGAAAATCACTCTTAA...CATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GTGTCTGTGATTGGGATACCGCAGAAACCATGCCGGGCCTTGGCCTCAAAAACAAATTCAGGTGTACAGTaGTGGTGGATGAAGCCAATA +
Preference number: 5 (lower is better)
Translates to: VSVIGIPQKPCRALASKTNSGVQ*WWMKPI
Trigger: TATTGGCTTCATCCACCACAACTGTACACCTGAATT...TGTTTTTGAGGCCAAGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp AGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCTCCCGCACGCGATCCTaGGGGCTGAGGACCACAGGG +
Preference number: 5 (lower is better)
Translates to: RVFVFDVLDHIDLEDGISSRTRS*GLRTTG
Trigger: CCCTGTGGTCCTCAGCCCCAAGGATCGCGTGCGGGA...GGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GAGTACATCATGGCTCGGACTTGGGTCAAGCTCTTGGCACCAATGTCCTGGCATCCAAGTCTTCCCTCTTaGTCATTATCTCTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: EYIMARTWVKLLAPMSWHPSLPS*SLSLPR
Trigger: TCTTGGAAGAGATAATGACAAAGAGGGAAGACTTGG...ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGAGCCATGATGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCAATATGACCCACATTTaGGATTCCTCCATCAGCAAT +
Preference number: 5 (lower is better)
Translates to: GGPKGQGFRNMTHILDSSNMTHI*DSSISN
Trigger: ATTGCTGATGGAGGAATCCAAAATGTGGGTCATATT...GGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GAATTTCCCTGGGAAGAGTCCAAAACCACTACATCCACACCAGCCTGGGCGAGCTGGGCCACTTTGATTTaGTCAGCTTCACTGAAATAT +
Preference number: 5 (lower is better)
Translates to: EFPWEESKTTTSTPAWASWATLI*SASLKY
Trigger: ATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCA...GCTCGCCCAGGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CATCGAGAGAACCCATACCGCGATATTTCTTTAGCCGGATCCCATCGGAAAAGAACTCCCTGGGCCACTTaGATTTTGTCAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: HRENPYRDISLAGSHRKRTPWAT*ILSASL
Trigger: CAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGT...TCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTTGTGGATTGACCCTTaGTCCTGCACAGCACCAGAC +
Preference number: 5 (lower is better)
Translates to: PDTPWATLILSASLKYLFLWIDP*SCTAPD
Trigger: GTCTGGTGCTGTGCAGGACAAAGGGTCAATCCACAA...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCACTTGGGTCAAGCTCTaGGCACCAATGTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PDTPWATLILSASLKYLFTWVKL*APMSWH
Trigger: ATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGT...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 90 bp CTGGTGGGGAAAGGATGCAGGAACCCAATAAAGGAGTCAGAAACTTaGTTTGACACTCCTTTCCCAGAGAGAAGAGGCTATCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: LVGKGCRNPIKESET*FDTPFPERRGYQRC
Trigger: ACATCTCTGATAGCCTCTTCTCTCTGGGAAAGGAGTGTCAAACCAAGTTTCTGACTCCTTTATTGGGTTCCTGCATCCTTTCCCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS-3UTR CAA 90 bp CCCAAGGGCCAAGGCTTTCGCAATATGACCCACATTTTGGATTCCTCCATCAGCTCATGTTCCTCCTCTTaGAGAAAATCAATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PKGQGFRNMTHILDSSISSCSSS*RKSMSL
Trigger: CAGGGACATTGATTTTCTCAAAGAGGAGGAACATGA...GCTGATGGAGGAATCCAAAATGTGGGTCATATTGCGAAAGCCTTGGCCCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp GACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGTACACTGCTGTTGCTaGGGGCCGCCCACAGGCCAG +
Preference number: 5 (lower is better)
Translates to: DLEIRVFVFDVLDHIDLEVHCCC*GPPTGQ
Trigger: CTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTAC...TTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS GCA 90 bp TCATATTTCTCAGTGCAATTCCCAGGAGCGCTTGCTAATGATCGTTaGCCTTCTGACCTTCACTTTCCGAACTTCATTGGCCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SYFSVQFPGALANDR*PSDLHFPNFIGLEF
Trigger: GAATTCCAGGCCAATGAAGTTCGGAAAGTGAAGGTCAGAAGGGCAACGATCATTAGCAAGCGCTCCTGGGAATTGCACTGAGAAATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485500.1
ENST00000677168.1
ENST00000677480.1
CDS TCA 90 bp CAAGGGATCCCAATAATTCTTAGCAGTATGGTATTGAGTGAGGGATaGGTAGAAAGGACAACATGGCACAGGGAGCACCCTCTTACACTA +
Preference number: 5 (lower is better)
Translates to: QGIPIILSSMVLSEG*VERTTWHREHPLTL
Trigger: TAGTGTAAGAGGGTGCTCCCTGTGCCATGTTGTCCTTTCTACTCATCCCTCACTCAATACCATACTGCTAAGAATTATTGGGATCCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS-3UTR CAA 90 bp CCAGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGGAGATTAGGGTATTaGTCTTTGATGTACTTGATC +
Preference number: 5 (lower is better)
Translates to: PDTPWATLILSASLKYLFWRLGY*SLMYLI
Trigger: GATCAAGTACATCAAAGACAAATACCCTAATCTCCA...GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp AGACACTCCCTGGGCCACTTTGATTTTGTCAGCTTCACTGAAATATCTGTTCTGAATATGACCCACATTTaGGATTCCTCCATCAGCAAT +
Preference number: 5 (lower is better)
Translates to: RHSLGHFDFVSFTEISVLNMTHI*DSSISN
Trigger: ATTGCTGATGGAGGAATCCAAAATGTGGGTCATATT...CAGAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 90 bp CATCCTTCAGGGCACAATCTTGCCTTACCATTGCCTCCAATGACTTaGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGATC +
Preference number: 5 (lower is better)
Translates to: HPSGHNLALPLPPMT*RLGYLSLMYLIILI
Trigger: GATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGCAAGATTGTGCCCTGAAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS-3UTR CAA 90 bp AGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCCCAAGTCTTCCCTCTTaGTCATTATCTCTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: RVFVFDVLDHIDLEDGISPSLPS*SLSLPR
Trigger: TCTTGGAAGAGATAATGACAAAGAGGGAAGACTTGG...GGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp AGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCATTGCCTCCAATGACTaGGAGATTAGGGTATTTGTC +
Preference number: 5 (lower is better)
Translates to: RVFVFDVLDHIDLEDGISIASND*EIRVFV
Trigger: GACAAATACCCTAATCTCCAAGTCATTGGAGGCAAT...GGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS-3UTR CAA 90 bp AGGGTATTTGTCTTTGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCTGGAGATTAGGGTATTaGTCTTTGATGTACTTGATC +
Preference number: 5 (lower is better)
Translates to: RVFVFDVLDHIDLEDGISWRLGY*SLMYLI
Trigger: GATCAAGTACATCAAAGACAAATACCCTAATCTCCA...GGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677480.1
ENST00000679117.1
CDS CCA 72 bp GGGAGCTACAGCTACGTCAACCAAGCAGCCGGGCAGTaGGCAGCTGGGCCGGGCCAGTGGGCCGGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: GSYSYVNQAAGQ*AAGPGQWAGLD
Trigger: GTCCAGCCCGGCCCACTGGCCCGGCCCAGCTGCCCACTGCCCGGCTGCTTGGTTGACGTAGCTGTAGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS GCA 72 bp GCCGCGTGTCTCCGAGGACCGCGCCGCAGAGACCTCTaGCGTCTGGGCCGCGCCAATATAAACCAGCCGATT +
Preference number: 6 (lower is better)
Translates to: AACLRGPRRRDL*RLGRANINQPI
Trigger: AATCGGCTGGTTTATATTGGCGCGGCCCAGACGGCAGAGGTCTCTGCGGCGCGGTCCTCGGAGACACGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676708.1
ENST00000677344.1
ENST00000679339.1
CDS CCA 72 bp CGCTCCAGATGTCTCAAAGTGAGCCCCGGAGGTGGGTaGCCAATTCCCGAAACCTGTCCCCCACGCCCACGC +
Preference number: 6 (lower is better)
Translates to: RSRCLKVSPGGG*PIPETCPPRPR
Trigger: GCGTGGGCGTGGGGGACAGGTTTCGGGAATTGGCCACCCACCTCCGGGGCTCACTTTGAGACATCTGGAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS CCA 72 bp AGGCGATGGAGTCCTTGCTCCTTCCCCCACACCCCATaGGGCTCACCGCCATTGCTATGGCCATCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: RRWSPCSFPHTP*GSPPLLWPSQP
Trigger: AGGCTGGGATGGCCATAGCAATGGCGGTGAGCCCCATGGGGTGTGGGGGAAGGAGCAAGGACTCCATCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000462980.2
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678920.1
CDS CCA 72 bp GTCCCACTGGCCTTCACGGGTACTGGGCCTCACCTGTaGAGGCCCCAAGGGCCAAGGCTTTCGCAATATGAC +
Preference number: 6 (lower is better)
Translates to: VPLAFTGTGPHL*RPQGPRLSQYD
Trigger: GTCATATTGCGAAAGCCTTGGCCCTTGGGGCCTCCACAGGTGAGGCCCAGTACCCGTGAAGGCCAGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678177.1
CDS TCA 72 bp CTCCGTACCCCAAGCACCGCTCCAGATGTCTCAAAGTaGGCCCCGGAGGTGGGTGGCCAATTCCCGAAACCT +
Preference number: 6 (lower is better)
Translates to: LRTPSTAPDVSK*APEVGGQFPKP
Trigger: AGGTTTCGGGAATTGGCCACCCACCTCCGGGGCTCACTTTGAGACATCTGGAGCGGTGCTTGGGGTACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS GCA 72 bp CCACCCCCAAACCATGGTCTGTGTATCAGTTGGCCTTaGCCACCCATCAGCACCACAAACCCCGGGAGCTAC +
Preference number: 6 (lower is better)
Translates to: PPPNHGLCISWP*PPISTTNPGSY
Trigger: GTAGCTCCCGGGGTTTGTGGTGCTGATGGGTGGGCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp CCCACCAAGGACAGGGTGACTTACGAATGGAGGCTATaGACGCCACCTTCCACCTGGGCTGAGGACGTTCTC +
Preference number: 6 (lower is better)
Translates to: PTKDRVTYEWRL*TPPSTWAEDVL
Trigger: GAGAACGTCCTCAGCCCAGGTGGAAGGTGGCGTCCATAGCCTCCATTCGTAAGTCACCCTGTCCTTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466147.5
ENST00000484872.1
ENST00000676864.1
ENST00000678085.1
ENST00000678177.1
CDS CAA 90 bp CCTTGTACACTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTGTaGAGATGGAGGAACACATGGGTGGATAGGGTTAATGGGGACGGG +
Preference number: 6 (lower is better)
Translates to: PCTLLLLGAAHRPAL*RWRNTWVDRVNGDG
Trigger: CCCGTCCCCATTAACCCTATCCACCCATGTGTTCCTCCATCTCAACAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGTGTACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 90 bp ACCCATGTCCCAGCTCCCCAAGCTCACCGGACTTGGGTCAAGCTCTaGGCACCAATGTCCTGGCATGAGTGTTGGATGCCAGCAATCAGG +
Preference number: 6 (lower is better)
Translates to: THVPAPQAHRTWVKL*APMSWHECWMPAIR
Trigger: CCTGATTGCTGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGGTGAGCTTGGGGAGCTGGGACATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000463903.1
ENST00000466147.5
ENST00000472328.2
ENST00000481274.1
ENST00000491610.2
ENST00000677108.1
ENST00000677344.1
ENST00000677593.1
ENST00000677740.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp TTGCTTGGGGCCGCCCACAGGCCAGCACTGTTGAGATaGAGGAACACATGGGTGGATAGGGTTAATGGGGAC +
Preference number: 6 (lower is better)
Translates to: LLGAAHRPALLR*RNTWVDRVNGD
Trigger: GTCCCCATTAACCCTATCCACCCATGTGTTCCTCCATCTCAACAGTGCTGGCCTGTGGGCGGCCCCAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 72 bp CCAGCTCCCCAAGCTCACCGGACTTGGGTCAAGCTCTaGGCACCAATGTCCTGGCATGAGTGTTGGATGCCA +
Preference number: 6 (lower is better)
Translates to: PAPQAHRTWVKL*APMSWHECWMP
Trigger: TGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGGTGAGCTTGGGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000463903.1
ENST00000466147.5
ENST00000472328.2
ENST00000481274.1
ENST00000491610.2
ENST00000677108.1
ENST00000677344.1
ENST00000677593.1
ENST00000677740.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 72 bp ACCACCCCCAAACCATGGTCTGTGTATCAGTTGGCCTaGCCCACCCATCAGCACCACAAACCCCGGGAGCTA +
Preference number: 6 (lower is better)
Translates to: TTPKPWSVYQLA*PTHQHHKPREL
Trigger: TAGCTCCCGGGGTTTGTGGTGCTGATGGGTGGGCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 72 bp TTGAGCACCACCCCCAAACCATGGTCTGTGTATCAGTaGGCCTTGCCCACCCATCAGCACCACAAACCCCGG +
Preference number: 6 (lower is better)
Translates to: LSTTPKPWSVYQ*ALPTHQHHKPR
Trigger: CCGGGGTTTGTGGTGCTGATGGGTGGGCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 90 bp TTCTTGAGCACCACCCCCAAACCATGGTCTGTGTATCAGTTGGCCTaGCCCACCCATCAGCACCACAAACCCCGGGAGCTACAGCTACGT +
Preference number: 6 (lower is better)
Translates to: FLSTTPKPWSVYQLA*PTHQHHKPRELQLR
Trigger: ACGTAGCTGTAGCTCCCGGGGTTTGTGGTGCTGATGGGTGGGCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 90 bp GCTATGTTCTTGAGCACCACCCCCAAACCATGGTCTGTGTATCAGTaGGCCTTGCCCACCCATCAGCACCACAAACCCCGGGAGCTACAG +
Preference number: 6 (lower is better)
Translates to: AMFLSTTPKPWSVYQ*ALPTHQHHKPRELQ
Trigger: CTGTAGCTCCCGGGGTTTGTGGTGCTGATGGGTGGGCAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAACATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS TCA 72 bp TGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTGTTaGGATGGAGGAACACATGGGTGGATAGGGTTAATG +
Preference number: 6 (lower is better)
Translates to: CCCLGPPTGQHC*DGGTHGWIGLM
Trigger: CATTAACCCTATCCACCCATGTGTTCCTCCATCTCAACAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS TCA 72 bp AAGGCCAGGCTAGGCAAGGGAGTGGCAGGTGATGGATaGCAAGACCTTGTCTTGCTTCCAGCCATGTCACCC +
Preference number: 6 (lower is better)
Translates to: KARLGKGVAGDG*QDLVLLPAMSP
Trigger: GGGTGACATGGCTGGAAGCAAGACAAGGTCTTGTCATCCATCACCTGCCACTCCCTTGCCTAGCCTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS GCA 72 bp GGACCCAGGAGCTTTTGGCTACATCTGCATCAGGACTaGAGCTTGGCTGAGGAACAGACGTGTCTGGGATGG +
Preference number: 6 (lower is better)
Translates to: GPRSFWLHLHQD*SLAEEQTCLGW
Trigger: CCATCCCAGACACGTCTGTTCCTCAGCCAAGCTGCAGTCCTGATGCAGATGTAGCCAAAAGCTCCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp TACATCATGGCTCTGAAGAAGGGCAGAGGTCAAATGTaGGTAGCTGGCCCTGGACCAGCCCCTCTACCCATG +
Preference number: 6 (lower is better)
Translates to: YIMALKKGRGQM*VAGPGPAPLPM
Trigger: CATGGGTAGAGGGGCTGGTCCAGGGCCAGCTACCCACATTTGACCTCTGCCCTTCTTCAGAGCCATGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000463903.1
ENST00000466147.5
ENST00000472328.2
ENST00000481274.1
ENST00000491610.2
ENST00000677108.1
ENST00000677344.1
ENST00000677740.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 72 bp CTGCTGTTGCTTGGGGCCGCCCACAGGCCAGCACTGTaGAGATGGAGGAACACATGGGTGGATAGGGTTAAT +
Preference number: 6 (lower is better)
Translates to: LLLLGAAHRPAL*RWRNTWVDRVN
Trigger: ATTAACCCTATCCACCCATGTGTTCCTCCATCTCAACAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 72 bp ACCCGCAGGGCATCCACACCTGCATCAATGAGGTTCTaGGCCTGGGCAGCAGTGACCACTATGGTGAAGGAA +
Preference number: 6 (lower is better)
Translates to: TRRASTPASMRF*AWAAVTTMVKE
Trigger: TTCCTTCACCATAGTGGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGCAGGTGTGGATGCCCTGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS CAA 90 bp GGTCCTGCCCTATCAGCACCCCAGAAGGAAGAGGGAGCTATGTTCTaGAGCACCACCCCCAAACCATGGTCTGTGTATCAGTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: GPALSAPQKEEGAMF*STTPKPWSVYQLAL
Trigger: CAAGGCCAACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAACATAGCTCCCTCTTCCTTCTGGGGTGCTGATAGGGCAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS TCA 72 bp CTTTTGGCTACATCTGCATCAGGACTGCAGCTTGGCTaGGGAACAGACGTGTCTGGGATGGCTGCTGCCACA +
Preference number: 6 (lower is better)
Translates to: LLATSASGLQLG*GTDVSGMAAAT
Trigger: TGTGGCAGCAGCCATCCCAGACACGTCTGTTCCTCAGCCAAGCTGCAGTCCTGATGCAGATGTAGCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS GCA 72 bp GGAATCTCCGGCCTGAGATTCCAAGCACTACTGAGATaGTTCTCCGTACCCCAAGCACCGCTCCAGATGTCT +
Preference number: 6 (lower is better)
Translates to: GISGLRFQALLR*FSVPQAPLQMS
Trigger: AGACATCTGGAGCGGTGCTTGGGGTACGGAGAAGCATCTCAGTAGTGCTTGGAATCTCAGGCCGGAGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS GCA 72 bp TACAGGGGACCTTTTCTGCCACCGAGCTGTCATCAGTaGTCCTGGCACCCTGACAATTCCATGTGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: YRGPFLPPSCHQ*SWHPDNSMCLE
Trigger: CTCCAGACACATGGAATTGTCAGGGTGCCAGGAGCACTGATGACAGCTCGGTGGCAGAAAAGGTCCCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS GCA 72 bp TATGCCTACTGCAGAAGATGTGGGCAGAAAAGGTCCTaGCTAGGGAAGAAGGTCCTGCCCTATCAGCACCCC +
Preference number: 6 (lower is better)
Translates to: YAYCRRCGQKRS*LGKKVLPYQHP
Trigger: GGGGTGCTGATAGGGCAGGACCTTCTTCCCTAGGCAGGACCTTTTCTGCCCACATCTTCTGCAGTAGGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp GGACCTTTTCTGCCACCGAGCTGTCATCAGTGCTCCTaGCACCCTGACAATTCCATGTGTCTGGAGCATGGA +
Preference number: 6 (lower is better)
Translates to: GPFLPPSCHQCS*HPDNSMCLEHG
Trigger: TCCATGCTCCAGACACATGGAATTGTCAGGGTGCCAGGAGCACTGATGACAGCTCGGTGGCAGAAAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS CCA 72 bp CTGACAGAGTCTGTGTGTCACAGGCACAGCACAAGGTaGAAATGGGTACAGGGGACCTTTTCTGCCACCGAG +
Preference number: 6 (lower is better)
Translates to: LTESVCHRHSTR*KWVQGTFSATE
Trigger: CTCGGTGGCAGAAAAGGTCCCCTGTACCCATTTCCACCTTGTGCTGTGCCTGTGACACACAGACTCTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677740.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS CCA 72 bp AGAAGCCCCTTGTCTTCAACCTGGGCTGCTAGAGCTTaGATCTACTCTGCCAGTGGCACCCACCTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: RSPLSSTWAARA*IYSASGTHLFQ
Trigger: TTGGAAGAGGTGGGTGCCACTGGCAGAGTAGATCCAAGCTCTAGCAGCCCAGGTTGAAGACAAGGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp CACCCCACCCCACCTCAGTGCAATTCCCAGGAGCGCTaGCTAATGATCGTTGCCCTTCTGACCTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: HPTPPQCNSQER*LMIVALLTFTF
Trigger: GAAAGTGAAGGTCAGAAGGGCAACGATCATTAGCAAGCGCTCCTGGGAATTGCACTGAGGTGGGGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000462980.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS CCA 72 bp TGGACCCTGTGGCCATATTTAGGACCCAGGAGCTTTTaGCTACATCTGCATCAGGACTGCAGCTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: WTLWPYLGPRSF*LHLHQDCSLAE
Trigger: CTCAGCCAAGCTGCAGTCCTGATGCAGATGTAGCCAAAAGCTCCTGGGTCCTAAATATGGCCACAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp GTGGATAGGGTTAATGGGGACGGGCAGTGGACCCTGTaGCCATATTTAGGACCCAGGAGCTTTTGGCTACAT +
Preference number: 6 (lower is better)
Translates to: VDRVNGDGQWTL*PYLGPRSFWLH
Trigger: ATGTAGCCAAAAGCTCCTGGGTCCTAAATATGGCCACAGGGTCCACTGCCCGTCCCCATTAACCCTATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp AACACATGGGTGGATAGGGTTAATGGGGACGGGCAGTaGACCCTGTGGCCATATTTAGGACCCAGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: NTWVDRVNGDGQ*TLWPYLGPRSF
Trigger: AAAGCTCCTGGGTCCTAAATATGGCCACAGGGTCCACTGCCCGTCCCCATTAACCCTATCCACCCATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481274.1
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS TCA 72 bp AATCAACCCGTAACGCATGTGAGCAGAGAGTGGCACTaGCAGAGTCTGTGTGTCACAGGCACAGCACAAGGT +
Preference number: 6 (lower is better)
Translates to: NQPVTHVSREWH*QSLCVTGTAQG
Trigger: ACCTTGTGCTGTGCCTGTGACACACAGACTCTGTCAGTGCCACTCTCTGCTCACATGCGTTACGGGTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000676627.1
ENST00000676708.1
ENST00000676864.1
ENST00000677108.1
ENST00000677168.1
ENST00000677344.1
ENST00000677740.1
ENST00000677991.1
ENST00000678001.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS CCA 72 bp AGTAGAAGGGCATTTGGGGCTGTGGGACTTTATGTCTaGAGGGATCTTGGGAGCCACTTCCTGCGTAATGCA +
Preference number: 6 (lower is better)
Translates to: SRRAFGAVGLYV*RDLGSHFLRNA
Trigger: TGCATTACGCAGGAAGTGGCTCCCAAGATCCCTCCAGACATAAAGTCCCACAGCCCCAAATGCCCTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429182.6
ENST00000678724.1
CDS CCA 72 bp AGTCCTAGGACAAGAAGTAAGTCTCAGACTGTGATGTaGCAGCTGCCCCTATTGCCCCAACCCACCTGTGTA +
Preference number: 6 (lower is better)
Translates to: SPRTRSKSQTVM*QLPLLPQPTCV
Trigger: TACACAGGTGGGTTGGGGCAATAGGGGCAGCTGCCACATCACAGTCTGAGACTTACTTCTTGTCCTAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677108.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp GATGTCTTAGACAACAGAAGCCCCTTGTCTTCAACCTaGGCTGCTAGAGCTTGGATCTACTCTGCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: DVLDNRSPLSST*AARAWIYSASG
Trigger: GCCACTGGCAGAGTAGATCCAAGCTCTAGCAGCCCAGGTTGAAGACAAGGGGCTTCTGTTGTCTAAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp CTATCAGCACCCCAGAAGGAAGAGGGAGCTATGTTCTaGAGCACCACCCCCAAACCATGGTCTGTGTATCAG +
Preference number: 6 (lower is better)
Translates to: LSAPQKEEGAMF*STTPKPWSVYQ
Trigger: CTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAACATAGCTCCCTCTTCCTTCTGGGGTGCTGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS TCA 72 bp TATCAGCACCCCAGAAGGAAGAGGGAGCTATGTTCTTaGGCACCACCCCCAAACCATGGTCTGTGTATCAGT +
Preference number: 6 (lower is better)
Translates to: YQHPRRKRELCS*APPPNHGLCIS
Trigger: ACTGATACACAGACCATGGTTTGGGGGTGGTGCTCAAGAACATAGCTCCCTCTTCCTTCTGGGGTGCTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CAA 90 bp CAGAGAGAAGAGGCTATCAGAGATGTCTTAGACAACAGAAGCCCCTaGTCTTCAACCTGGGCTGCTAGAGCTTGGATCTACTCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: QREEAIRDVLDNRSP*SSTWAARAWIYSAS
Trigger: ACTGGCAGAGTAGATCCAAGCTCTAGCAGCCCAGGTTGAAGACAAGGGGCTTCTGTTGTCTAAGACATCTCTGATAGCCTCTTCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS GCA 72 bp TCAGTGCAATTCCCAGGAGCGCTTGCTAATGATCGTTaGCCTTCTGACCTTCACTTTCCGAACTTCATTGGC +
Preference number: 6 (lower is better)
Translates to: SVQFPGALANDR*PSDLHFPNFIG
Trigger: GCCAATGAAGTTCGGAAAGTGAAGGTCAGAAGGGCAACGATCATTAGCAAGCGCTCCTGGGAATTGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000462980.2
ENST00000485500.1
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677168.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677480.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS GCA 72 bp CAGGACCCAATTCCTGATCATACTCACCACCTGGTCTaGAGTGAAGTCGATGTACCCAGGGAGAATGAGAAA +
Preference number: 6 (lower is better)
Translates to: QDPIPDHTHHLV*SEVDVPRENEK
Trigger: TTTCTCATTCTCCCTGGGTACATCGACTTCACTGCAGACCAGGTGGTGAGTATGATCAGGAATTGGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000485500.1
ENST00000676607.1
ENST00000676708.1
ENST00000676864.1
ENST00000677010.1
ENST00000677108.1
ENST00000677168.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677740.1
ENST00000677991.1
ENST00000678177.1
ENST00000678603.1
ENST00000679019.1
ENST00000679339.1
CDS GCA 72 bp TGGCCAGGCTGGTCTCAAACTCCTAACCTCATGATTTaGCTGCCTCAGTCTCCCAAAGTACTGAGATTACAG +
Preference number: 6 (lower is better)
Translates to: WPGWSQTPNLMI*LPQSPKVLRLQ
Trigger: CTGTAATCTCAGTACTTTGGGAGACTGAGGCAGGCAAATCATGAGGTTAGGAGTTTGAGACCAGCCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS TCA 72 bp GGGCATCGCATCTTTGAACTACTTTCATCAGGCTCTTaGTCTGAAGCATGGGGTCTCTGCTTATCGATCCCT +
Preference number: 6 (lower is better)
Translates to: GHRIFELLSSGS*SEAWGLCLSIP
Trigger: AGGGATCGATAAGCAGAGACCCCATGCTTCAGATCAAGAGCCTGATGAAAGTAGTTCAAAGATGCGATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000462980.2
ENST00000491610.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS TCA 72 bp CAAGTCTTCCCTCTTTGTCATTATCTACGTGGGAGGTaGGATGTGAAGAAGGGCCAGTCATCGACTATGACC +
Preference number: 6 (lower is better)
Translates to: QVFPLCHYLRGR*DVKKGQSSTMT
Trigger: GGTCATAGTCGATGACTGGCCCTTCTTCACATCTCACCTCCCACGTAGATAATGACAAAGAGGGAAGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CCA 72 bp AAATCACACCAACACATCTTAGAGACATGGGTAGGCTaGAGGCACTGTACACCTGGTCTATTGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: KSHQHILETWVG*RHCTPGLLLLL
Trigger: AAGCAGCAGCAATAGACCAGGTGTACAGTGCCTCCAGCCTACCCATGTCTCTAAGATGTGTTGGTGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000462980.2
ENST00000491610.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS CCA 72 bp AGGACAACATGGCACAGGGAGCACCCTCTTACACTATaGAATAAGGAGGACAACACAGGAACAATGGCAAGA +
Preference number: 6 (lower is better)
Translates to: RTTWHREHPLTL*NKEDNTGTMAR
Trigger: TCTTGCCATTGTTCCTGTGTTGTCCTCCTTATTCCATAGTGTAAGAGGGTGCTCCCTGTGCCATGTTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp GAACAAAGCATGAATACTAGCAAGCATTTGGGCAGTTaGAAAGCCTCTGGTGGGGAAAGGATGCAGGAACCC +
Preference number: 6 (lower is better)
Translates to: EQSMNTSKHLGS*KASGGERMQEP
Trigger: GGGTTCCTGCATCCTTTCCCCACCAGAGGCTTTCAAACTGCCCAAATGCTTGCTAGTATTCATGCTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 90 bp CCCACTCCCACCACACATCCTTCAGGGCACAATCTTGCCTTACCATaGCCTCCAATGACTTGGAGATTAGGGTATTTGTCTTTGATGTAC +
Preference number: 6 (lower is better)
Translates to: PTPTTHPSGHNLALP*PPMTWRLGYLSLMY
Trigger: GTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGCAAGATTGTGCCCTGAAGGATGTGTGGTGGGAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS TCA 72 bp CTGCCTCAGTCTCCCAAAGTACTGAGATTACAGGGGTaGAGTTCTATGGACCACCACGTTCATACATTCACA +
Preference number: 6 (lower is better)
Translates to: LPQSPKVLRLQG*SSMDHHVHTFT
Trigger: TGTGAATGTATGAACGTGGTGGTCCATAGAACTTCACCCCTGTAATCTCAGTACTTTGGGAGACTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp CCTGTTCATATTTCTCAGTGCAATTCCCAGGAGCGCTaGCTAATGATCGTTGCCCTTCTGACCTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: PVHISQCNSQER*LMIVALLTFTF
Trigger: GAAAGTGAAGGTCAGAAGGGCAACGATCATTAGCAAGCGCTCCTGGGAATTGCACTGAGAAATATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485500.1
ENST00000677168.1
ENST00000677480.1
CDS TCA 72 bp AAAAAGAGACTACTACTAAGTGACAAGAAGCAGGACTaGATGCCTTTGGGGAAAGGCGATGGAGTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: KKRLLLSDKKQD*MPLGKGDGVLA
Trigger: AGCAAGGACTCCATCGCCTTTCCCCAAAGGCATTCAGTCCTGCTTCTTGTCACTTAGTAGTAGTCTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000462980.2
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678920.1
CDS TCA 72 bp ATGCAGGAACCCAATAAAGGAGTCAGAAACTTGGTTTaGCACTCCTTTCCCAGAGAGAAGAGGCTATCAGAG +
Preference number: 6 (lower is better)
Translates to: MQEPNKGVRNLV*HSFPREKRLSE
Trigger: CTCTGATAGCCTCTTCTCTCTGGGAAAGGAGTGTCAAACCAAGTTTCTGACTCCTTTATTGGGTTCCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp ACCACACATCCTTCAGGGCACAATCTTGCCTTACCATaGCCTCCAATGACTTGGAGATTAGGGTATTTGTCT +
Preference number: 6 (lower is better)
Translates to: TTHPSGHNLALP*PPMTWRLGYLS
Trigger: AGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGCAAGATTGTGCCCTGAAGGATGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS CAA 90 bp TGTTCATATTTCTGGAAAGGGATGGTGAGAAAGGGCATCGCATCTTaGAACTACTTTCATCAGGCTCTTGATCTGAAGCATGGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: CSYFWKGMVRKGIAS*NYFHQALDLKHGVS
Trigger: AGAGACCCCATGCTTCAGATCAAGAGCCTGATGAAAGTAGTTCAAAGATGCGATGCCCTTTCTCACCATCCCTTTCCAGAAATATGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000462980.2
ENST00000491610.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS CCA 72 bp ATTTGGGGCTGTGGGACTTTATGTCTGGAGGGATCTTaGGAGCCACTAAATAAAACAAACAGACCAGAGTTT +
Preference number: 6 (lower is better)
Translates to: IWGCGTLCLEGS*EPLNKTNRPEF
Trigger: AAACTCTGGTCTGTTTGTTTTATTTAGTGGCTCCCAAGATCCCTCCAGACATAAAGTCCCACAGCCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000677185.1
ENST00000677344.1
ENST00000677740.1
ENST00000678085.1
ENST00000678177.1
ENST00000679019.1
CDS CCA 72 bp AAAGGATGCAGGAACCCAATAAAGGAGTCAGAAACTTaGTTTGACACTCCTTTCCCAGAGAGAAGAGGCTAT +
Preference number: 6 (lower is better)
Translates to: KGCRNPIKESET*FDTPFPERRGY
Trigger: ATAGCCTCTTCTCTCTGGGAAAGGAGTGTCAAACCAAGTTTCTGACTCCTTTATTGGGTTCCTGCATCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp TTCTGGAAAGGGATGGTGAGAAAGGGCATCGCATCTTaGAACTACTTTCATCAGGCTCTTGATCTGAAGCAT +
Preference number: 6 (lower is better)
Translates to: FWKGMVRKGIAS*NYFHQALDLKH
Trigger: ATGCTTCAGATCAAGAGCCTGATGAAAGTAGTTCAAAGATGCGATGCCCTTTCTCACCATCCCTTTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000462980.2
ENST00000491610.2
ENST00000496837.1
ENST00000676627.1
ENST00000676708.1
ENST00000677108.1
ENST00000677185.1
ENST00000677205.1
ENST00000677344.1
ENST00000677519.1
ENST00000677593.1
ENST00000677740.1
ENST00000677991.1
ENST00000678085.1
ENST00000678177.1
ENST00000678603.1
CDS CAA 90 bp GGTTTAAAAGAACAAAGCATGAATACTAGCAAGCATTTGGGCAGTTaGAAAGCCTCTGGTGGGGAAAGGATGCAGGAACCCAATAAAGGA +
Preference number: 6 (lower is better)
Translates to: GLKEQSMNTSKHLGS*KASGGERMQEPNKG
Trigger: TCCTTTATTGGGTTCCTGCATCCTTTCCCCACCAGAGGCTTTCAAACTGCCCAAATGCTTGCTAGTATTCATGCTTTGTTCTTTTAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CCA 72 bp GGGCACAATCTTGCCTTACCATTGCCTCCAATGACTTaGAGATTAGGGTATTTGTCTTTGATGTACTTGATC +
Preference number: 6 (lower is better)
Translates to: GHNLALPLPPMT*RLGYLSLMYLI
Trigger: GATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGCAAGATTGTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS CAA 72 bp GGTTTAAAAGAACAAAGCATGAATACTAGCAAGCATTaGGGCAGTTTGAAAGCCTCTGGTGGGGAAAGGATG +
Preference number: 6 (lower is better)
Translates to: GLKEQSMNTSKH*GSLKASGGERM
Trigger: CATCCTTTCCCCACCAGAGGCTTTCAAACTGCCCAAATGCTTGCTAGTATTCATGCTTTGTTCTTTTAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676864.1
ENST00000677108.1
ENST00000677740.1
ENST00000678177.1
CDS CAA 72 bp AGGGCACAATCTTGCCTTACCATTGCCTCCAATGACTaGGAGATTAGGGTATTTGTCTTTGATGTACTTGAT +
Preference number: 6 (lower is better)
Translates to: RAQSCLTIASND*EIRVFVFDVLD
Trigger: ATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGCAAGATTGTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS CAA 90 bp GCCTTACCATTGCCTCCAATGACTTGGAGATTAGGGTATTTGTCTTaGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: ALPLPPMTWRLGYLS*MYLIILIWKMEFPW
Trigger: CCAGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS CAA 90 bp ACATCCTTCAGGGCACAATCTTGCCTTACCATTGCCTCCAATGACTaGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATTGAT +
Preference number: 6 (lower is better)
Translates to: TSFRAQSCLTIASND*EIRVFVFDVLDHID
Trigger: ATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGGTAAGGCAAGATTGTGCCCTGAAGGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491610.2
ENST00000677740.1
CDS CAA 90 bp GTGACCACATTGCCTCCAATGACTTGGAGATTAGGGTATTTGTCTTaGATGTACTTGATCATATTGATCTGGAAGATGGAATTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: VTTLPPMTWRLGYLS*MYLIILIWKMEFPK
Trigger: TTTGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAATGTGGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677010.1
CDS CAA 90 bp ATGACTTGGAGATTAGGGTATTTGTCTTTGATGTACTTGATCATATaGATCTGGAAGATGGAATTTCCCAAAACCACTACATCCACACCA +
Preference number: 6 (lower is better)
Translates to: MTWRLGYLSLMYLII*IWKMEFPKTTTSTP
Trigger: TGGTGTGGATGTAGTGGTTTTGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677010.1
CDS CAA 90 bp TTGCCTCCAATGACTTGGAGATTAGGGTATTTGTCTTTGATGTACTaGATCATATTGATCTGGAAGATGGAATTTCCCAAAACCACTACA +
Preference number: 6 (lower is better)
Translates to: LPPMTWRLGYLSLMY*IILIWKMEFPKTTT
Trigger: TGTAGTGGTTTTGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCTCCAAGTCATTGGAGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677010.1
CDS CAA 72 bp AGATTAGGGTATTTGTCTTTGATGTACTTGATCATATaGATCTGGAAGATGGAATTTCCCAAAACCACTACA +
Preference number: 6 (lower is better)
Translates to: RLGYLSLMYLII*IWKMEFPKTTT
Trigger: TGTAGTGGTTTTGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAATACCCTAATCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677010.1