Pregenerated sensors for IMPDH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000106348Ensembl transcript IDs: ENST00000338791.11, ENST00000348127.10, ENST00000354269.9, ENST00000419067.6, ENST00000460045.1, ENST00000468842.1, ENST00000473463.1, ENST00000484496.5, ENST00000489263.1, ENST00000491376.5, ENST00000497868.5, ENST00000626419.2
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTACAGCCGCTTTTCGTAAACGGCAGAAAGGTATAGGAGTGCAGGCCATGGACGCCTTCGACTGCAGCTaGGGAGAAGGGAGGAATGGT | + |
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Preference number: 2 (lower is better) Translates to: STAAFRKRQKGIGVQAMDAFDCS*GEGRNG Trigger: ACCATTCCTCCCTTCTCCTCAGCTGCAGTCGAAGGC...GTCCATGGCCTGCACTCCTATACCTTTCTGCCGTTTACGAAAAGCGGCTGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484496.5 |
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| CDS-3UTR GCA 90 bp | AGTACAGCCGCTTTTCGTAAACGGCAGAAAGGTATAGGAGTGCAGGCCATGGACGGGGCCAGGAACATTTaGCTCACTGAGGAGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: STAAFRKRQKGIGVQAMDGARNI*LTEEGG Trigger: ACCACCCTCCTCAGTGAGGCAAATGTTCCTGGCCCC...GTCCATGGCCTGCACTCCTATACCTTTCTGCCGTTTACGAAAAGCGGCTGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484496.5 |
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| CDS-3UTR CCA 90 bp | AGTACAGCCGCTTTTCGTAAACGGCAGAAAGGTATAGGAGTGCAGGCCATGGACCGAAGGCGATCCATCTaGACACCAACACCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: STAAFRKRQKGIGVQAMDRRRSI*TPTPAS Trigger: ACTGGCAGGTGTTGGTGTCCAGATGGATCGCCTTCG...GTCCATGGCCTGCACTCCTATACCTTTCTGCCGTTTACGAAAAGCGGCTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484496.5 |
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| CDS-3UTR CCA 90 bp | AGTACAGCCGCTTTTCGTAAACGGCAGAAAGGTATAGGAGTGCAGGCCATGGACTGGCGTCATCACCTGTaGGGCCAGGAACATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: STAAFRKRQKGIGVQAMDWRHHL*GQEHLP Trigger: AGGCAAATGTTCCTGGCCCCACAGGTGATGACGCCA...GTCCATGGCCTGCACTCCTATACCTTTCTGCCGTTTACGAAAAGCGGCTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484496.5 |
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| CDS GCA 90 bp | AGTCGGGCGCTGTACCGCTGCGCCGCCGTCTCGTGTCCCGGGTGTTaGCGGGCTCCGGGCTCCGGAACAGCGGCGGCTCCGCCTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SRALYRCAAVSCPGC*RAPGSGTAAAPPPC Trigger: GCAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCCCGGCAACACCCGGGACACGAGACGGCGGCGCAGCGGTACAGCGCCCGACT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000338791.11 ENST00000348127.10 ENST00000354269.9 ENST00000419067.6 ENST00000473463.1 ENST00000489263.1 ENST00000491376.5 ENST00000497868.5 ENST00000626419.2 |
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| CDS CCA 90 bp | GGCTCCGGGCTCCGGAACAGCGGCGGCTCCGCCTCCCTGCAGCGGTaGTGGAGTGAGTGGCCCCTCCATGCGGAGGCCGCAGCTCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GSGLRNSGGSASLQR*WSEWPLHAEAAAQG Trigger: GCCCTGAGCTGCGGCCTCCGCATGGAGGGGCCACTCACTCCACCACCGCTGCAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000338791.11 ENST00000348127.10 ENST00000354269.9 ENST00000473463.1 ENST00000489263.1 ENST00000491376.5 ENST00000497868.5 ENST00000626419.2 |
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| CDS GCA 90 bp | TGTTGCCGGGCTCCGGGCTCCGGAACAGCGGCGGCTCCGCCTCCCTaGAGCGGTGGTGGAGTGAGTGGCCCCTCCATGCGGAGGCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: CCRAPGSGTAAAPPP*SGGGVSGPSMRRPQ Trigger: CTGCGGCCTCCGCATGGAGGGGCCACTCACTCCACCACCGCTGCAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCCCGGCAACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000338791.11 ENST00000348127.10 ENST00000354269.9 ENST00000473463.1 ENST00000489263.1 ENST00000491376.5 ENST00000497868.5 ENST00000626419.2 |
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| CDS GCA 90 bp | GGCTCCGCCCTGGGCTCCCCGCTCTCCCCGGCGCTGCTACGCAGATaGCTAGACTCGGTTCGTCTCTCCCATCCCAGATTCAGCGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: GSALGSPLSPALLRR*LDSVRLSHPRFSEG Trigger: ACCCTCGCTGAATCTGGGATGGGAGAGACGAACCGAGTCTAGGCATCTGCGTAGCAGCGCCGGGGAGAGCGGGGAGCCCAGGGCGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626419.2 |
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| CDS GCA 90 bp | AGGGATGATGTCCAGGCTGGCCACAGGGAACAGAGGATGCAGCTGTaGTGCAGAGAAGCCAGGACCCTCAGTGGGATGAGGAGCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RDDVQAGHREQRMQL*CREARTLSGMRSQW Trigger: CCACTGGCTCCTCATCCCACTGAGGGTCCTGGCTTCTCTGCAGCACAGCTGCATCCTCTGTTCCCTGTGGCCAGCCTGGACATCATCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468842.1 |
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| CDS CCA 90 bp | GGTCTGCTACTTAAGCCCTGTGCCTCAGTTTCCAGAACCACCATATaGGGACTGGCTGCCATCTGGGGAAGTCGGTGGCATGAGCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GLLLKPCASVSRTTI*GLAAIWGSRWHERA Trigger: GGCCCGCTCATGCCACCGACTTCCCCAGATGGCAGCCAGTCCCCATATGGTGGTTCTGGAAACTGAGGCACAGGGCTTAAGTAGCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460045.1 |
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| CDS CCA 90 bp | CCTGGGAGAATCAGGAAGTCGCTAGCCCTGCGAAGGCGATCCATCTaGACACCAACACCTGCCAGTAAGACCACTGAAGATAGTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: PGRIRKSLALRRRSI*TPTPASKTTEDSSE Trigger: TTCAGAACTATCTTCAGTGGTCTTACTGGCAGGTGTTGGTGTCCAGATGGATCGCCTTCGCAGGGCTAGCGACTTCCTGATTCTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419067.6 |
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| CDS CAA 90 bp | CAGTCGGGCGCTGTACCGCTGCGCCGCCGTCTCGTGTCCCGGGTGTaGCCGGGCTCCGGGCTCCGGAACAGCGGCGGCTCCGCCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QSGAVPLRRRLVSRV*PGSGLRNSGGSASL Trigger: CAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCCCGGCAACACCCGGGACACGAGACGGCGGCGCAGCGGTACAGCGCCCGACTG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000338791.11 ENST00000348127.10 ENST00000354269.9 ENST00000419067.6 ENST00000473463.1 ENST00000489263.1 ENST00000491376.5 ENST00000497868.5 ENST00000626419.2 |
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| CDS CCA 72 bp | GGCGGCTCCGCCTCCCTGCAGCGGTGGTGGAGTGAGTaGCCCCTCCATGCGGAGGCCGCAGCTCAGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: GGSASLQRWWSE*PLHAEAAAQGG Trigger: CCCGCCCTGAGCTGCGGCCTCCGCATGGAGGGGCCACTCACTCCACCACCGCTGCAGGGAGGCGGAGCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000338791.11 ENST00000348127.10 ENST00000354269.9 ENST00000473463.1 ENST00000489263.1 ENST00000491376.5 ENST00000497868.5 ENST00000626419.2 |
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| CDS CCA 72 bp | CTCCGGAACAGCGGCGGCTCCGCCTCCCTGCAGCGGTaGTGGAGTGAGTGGCCCCTCCATGCGGAGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LRNSGGSASLQR*WSEWPLHAEAA Trigger: TGCGGCCTCCGCATGGAGGGGCCACTCACTCCACCACCGCTGCAGGGAGGCGGAGCCGCCGCTGTTCCGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000338791.11 ENST00000348127.10 ENST00000354269.9 ENST00000473463.1 ENST00000489263.1 ENST00000491376.5 ENST00000497868.5 ENST00000626419.2 |
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| CDS TCA 72 bp | ATGGGGACTGGCTGCCATCTGGGGAAGTCGGTGGCATaGGCGGGCCCTGAAGGGTTGTGGGCTGATCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: MGTGCHLGKSVA*AGPEGLWADLP Trigger: GGGCAGATCAGCCCACAACCCTTCAGGGCCCGCTCATGCCACCGACTTCCCCAGATGGCAGCCAGTCCCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460045.1 |
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| CDS CCA 72 bp | ACCATATGGGGACTGGCTGCCATCTGGGGAAGTCGGTaGCATGAGCGGGCCCTGAAGGGTTGTGGGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: TIWGLAAIWGSR*HERALKGCGLI Trigger: GATCAGCCCACAACCCTTCAGGGCCCGCTCATGCCACCGACTTCCCCAGATGGCAGCCAGTCCCCATATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460045.1 |
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| CDS CAA 90 bp | GTCAGTCGGACAGGACTCCAGCAAGCACTGTTTGAACCCCAGGAGTaGGAGCCACCTGAACGGGGTGTCGTCGGGTGTGTAGCGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VSRTGLQQALFEPQE*EPPERGVVGCVARS Trigger: GGACCTCGCTACACACCCGACGACACCCCGTTCAGGTGGCTCCAACTCCTGGGGTTCAAACAGTGCTTGCTGGAGTCCTGTCCGACTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491376.5 |
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| CDS CCA 72 bp | CTTAAGCCCTGTGCCTCAGTTTCCAGAACCACCATATaGGGACTGGCTGCCATCTGGGGAAGTCGGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LKPCASVSRTTI*GLAAIWGSRWH Trigger: ATGCCACCGACTTCCCCAGATGGCAGCCAGTCCCCATATGGTGGTTCTGGAAACTGAGGCACAGGGCTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460045.1 |
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| CDS CCA 72 bp | ATCAGGAAGTCGCTAGCCCTGCGAAGGCGATCCATCTaGACACCAACACCTGCCAGTAAGACCACTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: IRKSLALRRRSI*TPTPASKTTED Trigger: ATCTTCAGTGGTCTTACTGGCAGGTGTTGGTGTCCAGATGGATCGCCTTCGCAGGGCTAGCGACTTCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419067.6 |
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