RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IMPA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141401

Ensembl transcript IDs: ENST00000269159.8, ENST00000383376.9, ENST00000586230.1, ENST00000588167.1, ENST00000588752.5, ENST00000588863.1, ENST00000588927.5, ENST00000589238.5, ENST00000589374.1, ENST00000590107.5, ENST00000590138.1, ENST00000625802.2

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATAGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCA +
Preference number: 1 (lower is better)
Translates to: NRHPRPLRPGGRVPM*SFQSLGPHAPWHAA
Trigger: TGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR GCA 90 bp AGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGAATTCAAGAGGCTTGGATTTGCCAG +
Preference number: 1 (lower is better)
Translates to: RRRPDPAGPCTAAPL*SGKSLRIQEAWICQ
Trigger: CTGGCAAATCCAAGCCTCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590107.5
3UTR GCA 90 bp AGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGAATTCAAGCTCTTGTCGAACAGCAA +
Preference number: 1 (lower is better)
Translates to: RRRPDPAGPCTAAPL*SGKSLRIQALVEQQ
Trigger: TTGCTGTTCGACAAGAGCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR GCA 90 bp CATGAGGTCGAGGGGTCCACCCGAAGTGTCTATCACGATGCCGCCTaGTTCTCTGATGATGACTGTGGCAGCCGCCAGATCCCAGCAGTG +
Preference number: 1 (lower is better)
Translates to: HEVEGSTRSVYHDAA*FSDDDCGSRQIPAV
Trigger: CACTGCTGGGATCTGGCGGCTGCCACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCCCTCGACCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR GCA 90 bp CTAAGGGTGAGGCCTTGGGCAGGCGCTAAGCAAACATCTGTTCTGTaGATGACTATGTGGCCTTGCCGAGAGGTTTTCTATCCAGTTCCT +
Preference number: 1 (lower is better)
Translates to: LRVRPWAGAKQTSVL*MTMWPCREVFYPVP
Trigger: AGGAACTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGCGCCTGCCCAAGGCCTCACCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR CCA 90 bp GCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAGGGTCACGTTTaGGGCCAATTTCTGTCAGAACCAAGGCCTTTGAGAGATCTGTCT +
Preference number: 1 (lower is better)
Translates to: APCYSGTASGSQGHV*GQFLSEPRPLRDLS
Trigger: AGACAGATCTCTCAAAGGCCTTGGTTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR TCA 90 bp GGATCAAAGAAAAGACTAGATCTAAAGCATTCAGGGCAGTGCTTTTaGCACTCTTGGACTGTCCCAAGTTCACTAAGGGTGAGGCCTTGG +
Preference number: 1 (lower is better)
Translates to: GSKKRLDLKHSGQCF*HSWTVPSSLRVRPW
Trigger: CCAAGGCCTCACCCTTAGTGAACTTGGGACAGTCCAAGAGTGTCAAAAGCACTGCCCTGAATGCTTTAGATCTAGTCTTTTCTTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR CCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAAGCCCAGGGAGGCCTTaGGAGCAGCTTTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: EQSVSHWHGAWATRATSPSPGRP*EQLCLS
Trigger: GCTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCT...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
3UTR-3UTR GCA 90 bp CCAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCTTGGGAGCAGCTTTaGCTCAGCCGCAGTCACTTC +
Preference number: 2 (lower is better)
Translates to: PGAEREPLAWSVGHEGHLPWEQL*LSRSHF
Trigger: GAAGTGACTGCGGCTGAGGCAAAGCTGCTCCCAAGG...GAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
3UTR-3UTR CCA 90 bp GCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGGGACCCCATGCGCCTTaGCATGCAGCAGCCGCTCCA +
Preference number: 2 (lower is better)
Translates to: AGQTGNRHPRPLRPGGRVGPHAP*HAAAAP
Trigger: TGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCC...CACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR GCA 90 bp GAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGATGACTATGTGGCCTTaGCGAGAGGTTTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: EPLAIAEGAPTPPARVQPMTMWP*REVFYP
Trigger: TGGATAGAAAACCTCTCGGCAAGGCCACATAGTCAT...CGGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR GCA 90 bp CCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCAGCCGCGGCCTCTTCTaGAATGAACCTTCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PTPPARVQPLLCAVVNHSSRGLF*NEPSAG
Trigger: GCCTGCAGAAGGTTCATTGCAGAAGAGGCCGCGGCT...GGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR CAA 90 bp TCGATGGGGTCGATGATCCACGTCGGGCTGTGGGTGAGCACACACTaGGCCCCAGAAGCCGCGGCCTCTTCTGCAATGAACCTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: SMGSMIHVGLWVSTH*APEAAASSAMNLLQ
Trigger: CTGCAGAAGGTTCATTGCAGAAGAGGCCGCGGCTTCTGGGGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGATCATCGACCCCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR TCA 90 bp AGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAGGGTCACGTTTGGCCAGGAGCAGAGCGTaGGCCACTGGCATGGAGCGT +
Preference number: 2 (lower is better)
Translates to: SSRSMLLRNSFRVAGSRLARSRA*ATGMER
Trigger: ACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGGC...CAAACGTGACCCTGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
3UTR-3UTR CCA 90 bp AATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGCCCCTGAGGCCAGGTaGCAGAGTGCCAATGTGGAG +
Preference number: 2 (lower is better)
Translates to: NHSDPMRLGMQQPLHVTQAPEAR*QSANVE
Trigger: CTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC...CTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR CCA 90 bp GAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGA +
Preference number: 2 (lower is better)
Translates to: ELPITRTPCALACSSRSMGRVPM*SFQSLG
Trigger: TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC...CATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR TCA 90 bp CCGCCGGCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCGAATTCCATCTGTTCTGTGCATaGCTATGTGGCCTTGCCGAG +
Preference number: 2 (lower is better)
Translates to: PPARVQPLLCAVVNHSEFHLFCA*LCGLAE
Trigger: CTCGGCAAGGCCACATAGTCATGCACAGAACAGATG...GAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR GCA 90 bp GACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCGGCCAGGTGGCAGAGTaGCAATGTGGAGCTTCCAAT +
Preference number: 2 (lower is better)
Translates to: DCGSRQIPAVQAKLVIGIGQVAE*QCGASN
Trigger: ATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCC...GATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR CCA 90 bp GGGAATCTGTGCACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCGCAGGCTGGTCCCTGTaGAGCTGGCCGCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: GNLCTKLQVPSMGSMIHVAGWSL*SWPLFT
Trigger: TGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGC...GACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR TCA 90 bp TCGAGGGGTCCACCCGAAGTGTCTATCACGATGCCGCCTGCTTCTCTGATGATGCAGAACCAAGGCCTTTaGGAGATCTGTCTCCCCGGA +
Preference number: 2 (lower is better)
Translates to: SRGPPEVSITMPPASLMMQNQGL*EICLPG
Trigger: TCCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTG...CATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR CCA 90 bp AATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGA +
Preference number: 2 (lower is better)
Translates to: NHSDPMRLGMQQPLHVTQGRVPM*SFQSLG
Trigger: TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC...CTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR CCA 90 bp TGGTCCCTGTGGAGCTGGCCGCTGTTTACACCTTCCAAAGGCATTCTCAGGATCCTAAGGGTGAGGCCTTaGGCAGGCGCTAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: WSLWSWPLFTPSKGILRILRVRP*AGAKQT
Trigger: TGTTTGCTTAGCGCCTGCCCAAGGCCTCACCCTTAG...GATCCTGAGAATGCCTTTGGAAGGTGTAAACAGCGGCCAGCTCCACAGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR CAA 90 bp CGCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAGGGTCACGTTaGGGGCCAATTTCTGTCAGAACCAAGGCCTTTGAGAGATCTGTC +
Preference number: 2 (lower is better)
Translates to: RSMLLRNSFRVAGSR*GPISVRTKAFERSV
Trigger: GACAGATCTCTCAAAGGCCTTGGTTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR TCA 90 bp AGCTCTTGTCGAACAGCAAATCCAATGCTAACCGCCACAGTCGGGAATCTGTGCTCAGGGCAGTGCTTTTaGCACTCTTGGACTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SSCRTANPMLTATVGNLCSGQCF*HSWTVP
Trigger: TGGGACAGTCCAAGAGTGTCAAAAGCACTGCCCTGA...GCACAGATTCCCGACTGTGGCGGTTAGCATTGGATTTGCTGTTCGACAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR CCA 90 bp GCATTCAGGGCAGTGCTTTTGACACTCTTGGACTGTCCCAAGTTCACTAAGGGTCTGTGCATGACTATGTaGCCTTGCCGAGAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: AFRAVLLTLLDCPKFTKGLCMTM*PCREVF
Trigger: GAAAACCTCTCGGCAAGGCCACATAGTCATGCACAG...ACCCTTAGTGAACTTGGGACAGTCCAAGAGTGTCAAAAGCACTGCCCTGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR CCA 90 bp AAATCAAGATTGGATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCCAGAGCGTGAGCCACTaGCATGGAGCGTGGGCCACG +
Preference number: 2 (lower is better)
Translates to: KSRLDYQYVFHRRFEFWPQSVSH*HGAWAT
Trigger: CGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG...GGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
3UTR-3UTR TCA 90 bp ATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACAAACACCAAATCCTGGTaGGAGAGACGTCGATTTAAA +
Preference number: 2 (lower is better)
Translates to: IINTYFTGDLSFGPDRRTNTKSW*ERRRFK
Trigger: TTTAAATCGACGTCTCTCTCACCAGGATTTGGTGTT...TGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
3UTR-3UTR CAA 90 bp CAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGACAGCCCAGGGAGGCCTaGGGAGCAGCTTTGCCTCAG +
Preference number: 3 (lower is better)
Translates to: QSVSHWHGAWATRATSPGQPREA*GAALPQ
Trigger: CTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCTG...TCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
3UTR CCA 72 bp CCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGACCCCATGCGCCTTGG +
Preference number: 3 (lower is better)
Translates to: PRPLRPGGRVPM*SFQSLGPHAPW
Trigger: CCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR-3UTR CAA 90 bp GAACCAAGGCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATCAGCCCAGGGAGGCCTaGGGAGCAGCTTTGCCTCAG +
Preference number: 3 (lower is better)
Translates to: EPRPLRDLSPRRPGAAGHQPREA*GAALPQ
Trigger: CTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCTG...ATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGCCTTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
3UTR-3UTR CAA 90 bp AGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGCGGACCCCATGCGCCTaGGCATGCAGCAGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: RWQSANVELPITRTPCALRTPCA*ACSSRS
Trigger: GGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCG...CAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR TCA 72 bp TCTCCCGGGTGCTGGCCGCAACCACTCTGCAAGCCATaGGGTCGAGGGGTCCACCCGAAGTGTCTATCACGA +
Preference number: 3 (lower is better)
Translates to: SPGCWPQPLCKP*GRGVHPKCLSR
Trigger: TCGTGATAGACACTTCGGGTGGACCCCTCGACCTCATGGCTTGCAGAGTGGTTGCGGCCAGCACCCGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR GCA 72 bp CCCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGAATTCAAGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PDPAGPCTAAPL*SGKSLRIQEAW
Trigger: CCAAGCCTCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
3UTR GCA 72 bp CCCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGAATTCAAGCTCTTGTC +
Preference number: 3 (lower is better)
Translates to: PDPAGPCTAAPL*SGKSLRIQALV
Trigger: GACAAGAGCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR CAA 90 bp CTGAGCTATGAGCATCGCCATCTCCCGGGTGCTGGCCGCAACCACTCTGCAAGCTCAGAACCAAGGCCTTaGAGAGATCTGTCTCCCCGG +
Preference number: 3 (lower is better)
Translates to: LSYEHRHLPGAGRNHSASSEPRP*RDLSPR
Trigger: CCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTGA...GCTTGCAGAGTGGTTGCGGCCAGCACCCGGGAGATGGCGATGCTCATAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR GCA 72 bp GAGGGGTCCACCCGAAGTGTCTATCACGATGCCGCCTaGTTCTCTGATGATGACTGTGGCAGCCGCCAGATC +
Preference number: 3 (lower is better)
Translates to: EGSTRSVYHDAA*FSDDDCGSRQI
Trigger: GATCTGGCGGCTGCCACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR GCA 72 bp GAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATaGAGCAGCCGCTCCATGTTACTCAGGAACAGCTTC +
Preference number: 3 (lower is better)
Translates to: ELPITRTPCALA*SSRSMLLRNSF
Trigger: GAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
3UTR CCA 72 bp CTCTTCTGCAATGAACCTTCTGCAGGCTGGTCCCTGTaGAGCTGGCCGCTGTTTACACCTTCCAAAGGCATT +
Preference number: 3 (lower is better)
Translates to: LFCNEPSAGWSL*SWPLFTPSKGI
Trigger: AATGCCTTTGGAAGGTGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGCAGAAGGTTCATTGCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR CAA 90 bp TGGTCCCTGTGGAGCTGGCCGCTGTTTACACCTTCCAAAGGCATTCTCAGGATCCATGACTATGTGGCCTaGCCGAGAGGTTTTCTATCC +
Preference number: 3 (lower is better)
Translates to: WSLWSWPLFTPSKGILRIHDYVA*PRGFLS
Trigger: GGATAGAAAACCTCTCGGCAAGGCCACATAGTCATG...GATCCTGAGAATGCCTTTGGAAGGTGTAAACAGCGGCCAGCTCCACAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR CCA 72 bp TCTTGGACTGTCCCAAGTTCACTAAGGGTGAGGCCTTaGGCAGGCGCTAAGCAAACATCTGTTCTGTGCATG +
Preference number: 3 (lower is better)
Translates to: SWTVPSSLRVRP*AGAKQTSVLCM
Trigger: CATGCACAGAACAGATGTTTGCTTAGCGCCTGCCCAAGGCCTCACCCTTAGTGAACTTGGGACAGTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR-3UTR CAA 90 bp CACAGTCGGGAATCTGTGCACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATGTGCTTTTGACACTCTaGGACTGTCCCAAGTTCACT +
Preference number: 3 (lower is better)
Translates to: HSRESVHKIAGAVDGVDDVLLTL*DCPKFT
Trigger: AGTGAACTTGGGACAGTCCAAGAGTGTCAAAAGCAC...ATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGATTCCCGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR TCA 72 bp CTTGGGCAGGCGCTAAGCAAACATCTGTTCTGTGCATaGCTATGTGGCCTTGCCGAGAGGTTTTCTATCCAG +
Preference number: 3 (lower is better)
Translates to: LGQALSKHLFCA*LCGLAERFSIQ
Trigger: CTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGCGCCTGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR GCA 72 bp AGGCCTTGGGCAGGCGCTAAGCAAACATCTGTTCTGTaGATGACTATGTGGCCTTGCCGAGAGGTTTTCTAT +
Preference number: 3 (lower is better)
Translates to: RPWAGAKQTSVL*MTMWPCREVFY
Trigger: ATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGCGCCTGCCCAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR GCA 72 bp AAGCAAACATCTGTTCTGTGCATGACTATGTGGCCTTaGCGAGAGGTTTTCTATCCAGTTCCTGTGCCGGGT +
Preference number: 3 (lower is better)
Translates to: KQTSVLCMTMWP*REVFYPVPVPG
Trigger: ACCCGGCACAGGAACTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR CCA 72 bp GGCGCTAAGCAAACATCTGTTCTGTGCATGACTATGTaGCCTTGCCGAGAGGTTTTCTATCCAGTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: GAKQTSVLCMTM*PCREVFYPVPV
Trigger: CACAGGAACTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
3UTR TCA 72 bp AAGATTGGATTATCAATACGTATTTCACAGGAGATTTaGGTTTTGGCCCTGACAGAAGAACACGTACTAACC +
Preference number: 3 (lower is better)
Translates to: KIGLSIRISQEI*VLALTEEHVLT
Trigger: GGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp CCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTCGATGGGGTCGATaGTCCACGTCGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PGDPEPLAIAEGAPTPPARRWGR*STSGCG
Trigger: CCCACAGCCCGACGTGGATCATCGACCCCATCGACG...GGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383376.9
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGAGGAGCCGCTGGCCATTaGAGAAGGCGCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: QSVSHWHGAWATRATSPGGAAGH*RRRPDP
Trigger: GGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC...TCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp CCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCTGGTCCCTGTGGAGCTaGCCGCTGTTTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: PGDPEPLAIAEGAPTPPAWSLWS*PLFTPS
Trigger: GGAAGGTGTAAACAGCGGCCAGCTCCACAGGGACCA...GGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp GGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCCCACTCTGCAAGCCATaGGGTCGAGGGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GAEREPLAWSVGHEGHLPPLCKP*GRGVHP
Trigger: CGGGTGGACCCCTCGACCTCATGGCTTGCAGAGTGG...GGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp GGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGCAGTGAGCCAAGACTaGACCACCGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GAAGHCRRRPDPAGPCTAAVSQD*TTALQP
Trigger: AGGCTGGAGTGCGGTGGTGCAGTCTTGGCTCACTGC...GGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp CCAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCGAGACCCGGAGCCGCTaGCCATTGCAGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PGAEREPLAWSVGHEGHLETRSR*PLQKAP
Trigger: GGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTC...GAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp CCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCTAAGGGTGAGGCCTTaGGCAGGCGCTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: PGDPEPLAIAEGAPTPPALRVRP*AGAKQT
Trigger: TGTTTGCTTAGCGCCTGCCCAAGGCCTCACCCTTAG...GGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp GGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGCAGGCTGGTCCCTGTaGAGCTGGCCGCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: GAAGHCRRRPDPAGPCTAAGWSL*SWPLFT
Trigger: TGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGC...GGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAACGTCGGGCTGTGGGTaGGCACACACTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EQSVSHWHGAWATRATSPTSGCG*AHTWPQ
Trigger: CTGGGGCCAAGTGTGTGCTCACCCACAGCCCGACGT...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp AGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAAGCCCGCAGCGCCAGCTaGACGGCCGCCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RHPRPLRPGGRVPMWSFQARSAS*TAAWKH
Trigger: GTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGC...TTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCATCGCCATCTCCCGGGTaGTGGCCGCAACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: EQSVSHWHGAWATRATSPSPSPG*WPQPLC
Trigger: GCAGAGTGGTTGCGGCCAGCACCCGGGAGATGGCGA...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp GGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCGCCCCTGAGGCCAGGTaGCAGAGTGCCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: GAEREPLAWSVGHEGHLPAPEAR*QSANVE
Trigger: CTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC...GGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp GGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGCCCAGGGAGGCCTTaGGAGCAGCTTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GAEREPLAWSVGHEGHLPSPGRP*EQLCLS
Trigger: GCTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCT...GGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp CAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGACAGAGCGTGAGCCACTaGCATGGAGCGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QSVSHWHGAWATRATSPGQSVSH*HGAWAT
Trigger: CGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG...TCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp GGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGTAATCCCAATACTTTaGGAGGCCCGGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GAAGHCRRRPDPAGPCTAVIPIL*EARAGG
Trigger: TCCACCCGCCCGGGCCTCCCAAAGTATTGGGATTAC...GGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp TTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGGGGCCGCGGGAGCCGTaGGTCCTGCTTTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: FERSVSPETRSRWPLQKAGPREP*VLLSAP
Trigger: GGGAGCGGAAAGCAGGACGCACGGCTCCCGCGGCCC...CGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp GCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGCGCCCGTCCCACACCTaGGCTGGCGGGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AFERSVSPETRSRWPLQKRPSHT*AGGKGS
Trigger: GCTGCCCTTCCCGCCAGCGCAGGTGTGGGACGGGCG...CTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR TCA 90 bp CAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGAGTAAGGCCTGAGCTATaGGCATCGCCATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QSVSHWHGAWATRATSPGVRPEL*ASPSPG
Trigger: CCCGGGAGATGGCGATGCTCATAGCTCAGGCCTTAC...TCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp CCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCGCCAGGAGCAGAGCGTaGGCCACTGGCATGGAGCGT +
Preference number: 4 (lower is better)
Translates to: PTPPARVQPLLCAVVNHSARSRA*ATGMER
Trigger: ACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGGC...GGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR TCA 90 bp AGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGCTTGAGGTCAGCAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SRWPLQKAPRPRRPVYSRLRSAV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTGCTGACCTCAA...GCGGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp CCAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCTCTGATGATCTGTCCTaGCCGCAGCGCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PGAEREPLAWSVGHEGHLSDDLS*PQRQLH
Trigger: GTGCAGCTGGCGCTGCGGGCAGGACAGATCATCAGA...GAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCATCTGATGATCTGTCCTaGCCGCAGCGCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EQSVSHWHGAWATRATSPSDDLS*PQRQLH
Trigger: GTGCAGCTGGCGCTGCGGGCAGGACAGATCATCAGA...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp CATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCAGGAGCCGCTGGCCATTaGAGAAGGCGCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: HPRPLRPGGRVPMWSFQSGAAGH*RRRPDP
Trigger: GGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC...TGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGGAGCCGCTGGCCATTaGAGAAGGCGCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: AFERSVSPETRSRWPLQKGAAGH*RRRPDP
Trigger: GGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC...CTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CCAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCATCCACGTCGGGCTGTaGGTGAGCACACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGAEREPLAWSVGHEGHLIHVGL*VSTHLA
Trigger: GGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGAT...GAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp GATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGCCAGGGGCCCTGGGGACCTaGGCCACACCCGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: DPSSAGQTGNRHPRPLRPGALGT*ATPAPL
Trigger: AAGAGGTGCGGGTGTGGCCCAGGTCCCCAGGGCCCC...TGGCCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp ATGAGGTCGAGGGGTCCACCCGAAGTGTCTATCACGATGCCGCCTGCTTCTCTGGCCCGCAGCGCCAGCTaGACGGCCGCCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: MRSRGPPEVSITMPPASLARSAS*TAAWKH
Trigger: GTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGC...CAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCCCTCGACCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CCGCCGGCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCGAATTCGGAGCCGCTGGCCATTaGAGAAGGCGCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: PPARVQPLLCAVVNHSEFGAAGH*RRRPDP
Trigger: GGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC...GAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383376.9
ENST00000590107.5
CDS-3UTR GCA 90 bp CAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGACCATGCGCCTTGGCATaGAGCAGCCGCTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: QSVSHWHGAWATRATSPGPCALA*SSRSML
Trigger: TAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGG...TCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp CCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCATGAGGCAGGAGAATTaGTTGAACCTAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: PGDPEPLAIAEGAPTPPAMRQEN*LNLGCG
Trigger: TCCACATCCTAGGTTCAAGCAATTCTCCTGCCTCAT...GGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp AGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGAATCCACGTCGGGCTGTaGGTGAGCACACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RSVSPETRSRWPLQKAPRIHVGL*VSTHLA
Trigger: GGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGAT...TCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCCGTCGATGGGGTCGATaGTCCACGTCGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ARWQSANVELPITRTPCARRWGR*STSGCG
Trigger: CCCACAGCCCGACGTGGATCATCGACCCCATCGACG...GGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCACAGAACCAAGGCCTTTaGGAGATCTGTCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: EQSVSHWHGAWATRATSPQNQGL*EICLPG
Trigger: TCCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTG...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp ATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCAGAACCAAGGCCTTTaGGAGATCTGTCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: ICLPGDPEPLAIAEGAPTQNQGL*EICLPG
Trigger: TCCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTG...GGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGGCTCCCGCAGCTCTGTaGCTAGTCCGCCGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: HAPWHAAAAPCYSGTASGAPAAL*LVRRPS
Trigger: GGACGGGCGGCGGACTAGGCACAGAGCTGCGGGAGC...CCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp TCTGCAATGAACCTTCTGCAGGCTGGTCCCTGTGGAGCTGGCCGCTGTTTACACGCCCGCAGCGCCAGCTaGACGGCCGCCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SAMNLLQAGPCGAGRCLHARSAS*TAAWKH
Trigger: GTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGC...GTGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGCAGAAGGTTCATTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp GCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGA +
Preference number: 4 (lower is better)
Translates to: AEREPLAWSVGHEGHLPRTAAPL*SGKSLR
Trigger: TCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGT...CCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp TGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGGGAGCCGCTGGCCATTaGAGAAGGCGCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: CQCGASNHSDPMRLGMQQGAAGH*RRRPDP
Trigger: GGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC...CTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGCCAGGTGGCAGAGTaGCAATGTGGAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: EQSVSHWHGAWATRATSPGQVAE*QCGASN
Trigger: ATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCC...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp ACCAAGGCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGTCGCCATCTCCCGGGTaGTGGCCGCAACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: TKAFERSVSPETRSRWPLSPSPG*WPQPLC
Trigger: GCAGAGTGGTTGCGGCCAGCACCCGGGAGATGGCGA...CAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGTCCCACACCTGCGCTaGCGGGAAGGGCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PMRLGMQQPLHVTQEQLQVPHLR*REGQPA
Trigger: CGCTGGCTGCCCTTCCCGCCAGCGCAGGTGTGGGAC...CTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp TCTGCAATGAACCTTCTGCAGGCTGGTCCCTGTGGAGCTGGCCGCTGTTTACACGCTCCCGCAGCTCTGTaGCTAGTCCGCCGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SAMNLLQAGPCGAGRCLHAPAAL*LVRRPS
Trigger: GGACGGGCGGCGGACTAGGCACAGAGCTGCGGGAGC...GTGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGCAGAAGGTTCATTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp TTTAAAAGGCCAGCCACTCACTGTAGCGTGACAACTCCCTCTGGGGTAGCCAGGGCCCGCAGCGCCAGCTaGACGGCCGCCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FKRPATHCSVTTPSGVARARSAS*TAAWKH
Trigger: GTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGC...CCTGGCTACCCCAGAGGGAGTTGTCACGCTACAGTGAGTGGCTGGCCTTTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp GGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCTCGCAGGGTCACGTTTaGGGCCAATTTCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GAEREPLAWSVGHEGHLPSQGHV*GQFLSE
Trigger: TTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGA...GGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp GAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCGTCGATGGGGTCGATaGTCCACGTCGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ECQCGASNHSDPMRLGMQRRWGR*STSGCG
Trigger: CCCACAGCCCGACGTGGATCATCGACCCCATCGACG...CTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATCCACTCTGCAAGCCATaGGGTCGAGGGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GRVPMWSFQSLGPHAPWHPLCKP*GRGVHP
Trigger: CGGGTGGACCCCTCGACCTCATGGCTTGCAGAGTGG...ATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCATCTGTGCACAAAATTaGAGGTGCCGTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: QEQSVSHWHGAWATRATSICAQN*RCRRWG
Trigger: ACCCCATCGACGGCACCTGCAATTTTGTGCACAGAT...GGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp GCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCCCATGCGCCTTGGCATaGAGCAGCCGCTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: ASAAPEARWQSANVELPIPCALA*SSRSML
Trigger: TAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGG...GATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCATCGCCATCTCCCGGGTaGTGGCCGCAACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: PHAPWHAAAAPCYSGTASSPSPG*WPQPLC
Trigger: GCAGAGTGGTTGCGGCCAGCACCCGGGAGATGGCGA...TGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGGACCCCATGCGCCTTaGCATGCAGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRPGGRVPMWSFQSLGPHGPHAP*HAAAAP
Trigger: TGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCC...ATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAGGGGACCCCATGCGCCTTaGCATGCAGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGMQQPLHVTQEQLQGRRGPHAP*HAAAAP
Trigger: TGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCC...CCTGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGACCCCATGCGCCTTaGCATGCAGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PHAPWHAAAAPCYSGTASGPHAP*HAAAAP
Trigger: TGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCC...TGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp GCTTCTCTGATGATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACCAGAGCGTGAGCCACTaGCATGGAGCGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: ASLMMTVAAARSQQCRPNQSVSH*HGAWAT
Trigger: CGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTG...GTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATCATCAGAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR CCA 90 bp GCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCACTTCAAGACCAGCCTaGGCAGCATGGCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ARWQSANVELPITRTPCATSRPA*AAWRSP
Trigger: GGGGCTTCGCCATGCTGCCCAGGCTGGTCTTGAAGT...GGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586230.1
CDS-3UTR TCA 90 bp GAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCATGCAATGAACCTGTGTaGAGGAAACCTCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: EQSVSHWHGAWATRATSPCNEPV*RKPLSQ
Trigger: TTGCGAGAGAGGTTTCCTTCACACAGGTTCATTGCA...TGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp GGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGGTAAGGCCTGAGCTATaGGCATCGCCATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GGRVPMWSFQSLGPHAPWVRPEL*ASPSPG
Trigger: CCCGGGAGATGGCGATGCTCATAGCTCAGGCCTTAC...CCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATaGAGCAGCCGCTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: APEARWQSANVELPITRTPCALA*SSRSML
Trigger: TAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGG...GGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGGGCCAGGTGGCAGAGTaGCAATGTGGAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: AGQTGNRHPRPLRPGGRVGQVAE*QCGASN
Trigger: ATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCC...CACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CCAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCTATCACGATGCCGCCTaGTTCTCTGATGATGACTGT +
Preference number: 4 (lower is better)
Translates to: PGAEREPLAWSVGHEGHLYHDAA*FSDDDC
Trigger: ACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATA...GAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp CAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCGTAATCCCAGCACTTTaGAAGGCTGAGGTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: QPPDPSSAGQTGNRHPRPVIPAL*KAEVRR
Trigger: TCGGCGCACCTCAGCCTTGCAAAGTGCTGGGATTAC...GGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586230.1
CDS-3UTR CCA 90 bp GATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCGCCCCTGAGGCCAGGTaGCAGAGTGCCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: DDCGSRQIPAVQAKLVIGAPEAR*QSANVE
Trigger: CTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC...GCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CAATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCACCATCTCCCGGGTGCTaGCCGCAACCACTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QSLGPHAPWHAAAAPCYSPSPGC*PQPLCK
Trigger: CTTGCAGAGTGGTTGCGGCCAGCACCCGGGAGATGG...TGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
3UTR CAA 72 bp TCGATGATCCACGTCGGGCTGTGGGTGAGCACACACTaGGCCCCAGAAGCCGCGGCCTCTTCTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: SMIHVGLWVSTH*APEAAASSAMN
Trigger: GTTCATTGCAGAAGAGGCCGCGGCTTCTGGGGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGATCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp GATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCGTAAGGCCTGAGCTATaGGCATCGCCATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DDCGSRQIPAVQAKLVIGVRPEL*ASPSPG
Trigger: CCCGGGAGATGGCGATGCTCATAGCTCAGGCCTTAC...GCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTCCATGCGCCTTGGCATaGAGCAGCCGCTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: PGGRVPMWSFQSLGPHAPPCALA*SSRSML
Trigger: TAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGG...AGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp ACCAAGGCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGGGCCAGGTGGCAGAGTaGCAATGTGGAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TKAFERSVSPETRSRWPLGQVAE*QCGASN
Trigger: ATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCC...CAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp AGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCCCCGATATCACGATGCCGCCTaGTTCTCTGATGATGACTGT +
Preference number: 4 (lower is better)
Translates to: RSVSPETRSRWPLQKAPRYHDAA*FSDDDC
Trigger: ACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATA...TCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGCTGTGCACAAAATTaGAGGTGCCGTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: PPDPSSAGQTGNRHPRPLSCAQN*RCRRWG
Trigger: ACCCCATCGACGGCACCTGCAATTTTGTGCACAGCT...CAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590138.1
CDS-3UTR CCA 90 bp ACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCGGGCTGTGGGTGATCCACGTCGGGCTGTaGGTGAGCACACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: TKLQVPSMGSMIHVGLWVIHVGL*VSTHLA
Trigger: GGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGAT...CACCCACAGCCCGACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp TTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGCGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGA +
Preference number: 4 (lower is better)
Translates to: LRDLSPRRPGAAGHCRRRGRVPM*SFQSLG
Trigger: TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC...GCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp GTCTATCACGATGCCGCCTGCTTCTCTGATGATGACTGTGGCAGCCGCCAGATCGCCCCTGAGGCCAGGTaGCAGAGTGCCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: VYHDAACFSDDDCGSRQIAPEAR*QSANVE
Trigger: CTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC...GATCTGGCGGCTGCCACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GAACCAAGGCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATATCGTCTGTAAGGCCTaGGCTATGAGCATCGCCATC +
Preference number: 4 (lower is better)
Translates to: EPRPLRDLSPRRPGAAGHIVCKA*AMSIAI
Trigger: GATGGCGATGCTCATAGCTCAGGCCTTACAGACGAT...ATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGCCTTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp TGCAATGAACCTTCTGCAGGCTGGTCCCTGTGGAGCTGGCCGCTGTTTACACCTATGTGGAGGCTGCAGTaGGCCAAGACTGCACCACCG +
Preference number: 4 (lower is better)
Translates to: CNEPSAGWSLWSWPLFTPMWRLQ*AKTAPP
Trigger: CGGTGGTGCAGTCTTGGCTCACTGCAGCCTCCACAT...AGGTGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGCAGAAGGTTCATTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp CGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACAGAACCAAGGCCTTTaGGAGATTCATGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPLRPGGRVPMWSFQSLGQNQGL*EIHELG
Trigger: GCCCAGCTCATGAATCTCTCAAAGGCCTTGGTTCTG...TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586230.1
CDS-3UTR TCA 90 bp TGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCAGGCGCACAGAGGCTaGAGCCAGAAAGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: CQCGASNHSDPMRLGMQQQAHRG*SQKGRM
Trigger: CATCCTTCCTTTCTGGCTTCAGCCTCTGTGCGCCTG...CTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp GCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGACAGTCGGGAATCTGTaGACAAAATTGCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: AGQTGNRHPRPLRPGGRVTVGNL*TKLQVP
Trigger: CGGCACCTGCAATTTTGTGCACAGATTCCCGACTGT...CACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586230.1
ENST00000590107.5
CDS-3UTR GCA 90 bp ACCAAGGCCTTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGA +
Preference number: 4 (lower is better)
Translates to: TKAFERSVSPETRSRWPLTAAPL*SGKSLR
Trigger: TCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGT...CAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAAGGCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp ACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCGGGCTGTGGGTGAGCCGCGGCCTCTTCTaGAATGAACCTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TKLQVPSMGSMIHVGLWVSRGLF*NEPSAG
Trigger: GCCTGCAGAAGGTTCATTGCAGAAGAGGCCGCGGCT...CACCCACAGCCCGACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp TCGAGGGGTCCACCCGAAGTGTCTATCACGATGCCGCCTGCTTCTCTGATGATGATCCACGTCGGGCTGTaGGTGAGCACACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRGPPEVSITMPPASLMMIHVGL*VSTHLA
Trigger: GGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGAT...CATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCCCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp GCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCTCGCAGGGTCACGTTTaGGGCCAATTTCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ASAAPEARWQSANVELPISQGHV*GQFLSE
Trigger: TTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGA...GATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp CCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGA +
Preference number: 4 (lower is better)
Translates to: PDPSSAGQTGNRHPRPLRGRVPM*SFQSLG
Trigger: TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC...CCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCGAATTCAAGCTCTCTGATGATCTGTCCTaGCCGCAGCGCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ARVQPLLCAVVNHSEFKLSDDLS*PQRQLH
Trigger: GTGCAGCTGGCGCTGCGGGCAGGACAGATCATCAGA...GAGCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp GGGTCCACCCGAAGTGTCTATCACGATGCCGCCTGCTTCTCTGATGATGACTGTTCTGATGATCTGTCCTaGCCGCAGCGCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GSTRSVYHDAACFSDDDCSDDLS*PQRQLH
Trigger: GTGCAGCTGGCGCTGCGGGCAGGACAGATCATCAGA...ACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp TTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGATCTGTGCACAAAATTaGAGGTGCCGTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: FERSVSPETRSRWPLQKAICAQN*RCRRWG
Trigger: ACCCCATCGACGGCACCTGCAATTTTGTGCACAGAT...CGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp GAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGGGCCAGGTGGCAGAGTaGCAATGTGGAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ECQCGASNHSDPMRLGMQGQVAE*QCGASN
Trigger: ATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCC...CTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp TCTGATGATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTACCTTGGGAGCAGCTTTaGCTCAGCCGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: SDDDCGSRQIPAVQAKLVPWEQL*LSRSHF
Trigger: GAAGTGACTGCGGCTGAGGCAAAGCTGCTCCCAAGG...TACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATCATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp AGCTCTTGTCGAACAGCAAATCCAATGCTAACCGCCACAGTCGGGAATCTGTGCCAGGGAGGCGGAGGTTaGAGTGAGCCGAGATCGCCC +
Preference number: 4 (lower is better)
Translates to: SSCRTANPMLTATVGNLCQGGGG*SEPRSP
Trigger: GGGCGATCTCGGCTCACTGCAACCTCCGCCTCCCTG...GCACAGATTCCCGACTGTGGCGGTTAGCATTGGATTTGCTGTTCGACAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp CTGGCCGCAACCACTCTGCAAGCCATGAGGTCGAGGGGTCCACCCGAAGTGTCTTGCAATGAACCTGTGTaGAGGAAACCTCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: LAATTLQAMRSRGPPEVSCNEPV*RKPLSQ
Trigger: TTGCGAGAGAGGTTTCCTTCACACAGGTTCATTGCA...AGACACTTCGGGTGGACCCCTCGACCTCATGGCTTGCAGAGTGGTTGCGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp ATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGTCAGAACCAAGGCCTTTaGGAGATCTGTCTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: MRLGMQQPLHVTQEQLQGQNQGL*EICLPG
Trigger: TCCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTG...ACCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAATCGTCTGTAAGGCCTaGGCTATGAGCATCGCCATC +
Preference number: 4 (lower is better)
Translates to: ALACSSRSMLLRNSFRVAIVCKA*AMSIAI
Trigger: GATGGCGATGCTCATAGCTCAGGCCTTACAGACGAT...TGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp CTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATCCTTTGAGAGATTCATaGGCTGGGCGTGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LRPGGRVPMWSFQSLGPHPLRDS*AGRGGS
Trigger: TGAACCACCACGCCCAGCTCATGAATCTCTCAAAGG...ATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586230.1
CDS-3UTR GCA 90 bp GAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGA +
Preference number: 4 (lower is better)
Translates to: ECQCGASNHSDPMRLGMQTAAPL*SGKSLR
Trigger: TCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGT...CTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp GATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGA +
Preference number: 4 (lower is better)
Translates to: DDCGSRQIPAVQAKLVIGTAAPL*SGKSLR
Trigger: TCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGT...GCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR GCA 90 bp CCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCTATCACGATGCCGCCTaGTTCTCTGATGATGACTGT +
Preference number: 4 (lower is better)
Translates to: PLRPGGRVPMWSFQSLGPYHDAA*FSDDDC
Trigger: ACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATA...GGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GCTAAGCAAACATCTGTTCTGTGCATGACTATGTGGCCTTGCCGAGAGGTTTTCACGTCGGGCTGTGGGTaGGCACACACTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AKQTSVLCMTMWPCREVFTSGCG*AHTWPQ
Trigger: CTGGGGCCAAGTGTGTGCTCACCCACAGCCCGACGT...GAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp AGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAAAACACCAAATCCTGGTaGGAGAGACGTCGATTTAAA +
Preference number: 4 (lower is better)
Translates to: RHPRPLRPGGRVPMWSFQNTKSW*ERRRFK
Trigger: TTTAAATCGACGTCTCTCTCACCAGGATTTGGTGTT...TTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp GGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTGCTCCCGCAGCTCTGTaGCTAGTCCGCCGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GDLSFGPDRRTRTNLKKAAPAAL*LVRRPS
Trigger: GGACGGGCGGCGGACTAGGCACAGAGCTGCGGGAGC...AGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp ACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCGGGCTGTGGGTGATCTGTGCACAAAATTaGAGGTGCCGTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: TKLQVPSMGSMIHVGLWVICAQN*RCRRWG
Trigger: ACCCCATCGACGGCACCTGCAATTTTGTGCACAGAT...CACCCACAGCCCGACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp CCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGACAGTCGGGAATCTGTaGACAAAATTGCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: PMRLGMQQPLHVTQEQLQTVGNL*TKLQVP
Trigger: CGGCACCTGCAATTTTGTGCACAGATTCCCGACTGT...CTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586230.1
ENST00000590107.5
CDS-3UTR GCA 90 bp TCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGATCCGAATTCAAGCTGTaGACAAAATTGCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SLGPHAPWHAAAAPCYSGSEFKL*TKLQVP
Trigger: CGGCACCTGCAATTTTGTGCACAGCTTGAATTCGGA...TCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590138.1
CDS-3UTR CCA 90 bp CAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTTTCGCAGGGTCACGTTTaGGGCCAATTTCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: QVAECQCGASNHSDPMRLSQGHV*GQFLSE
Trigger: TTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGA...AAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp TCTGATGATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGA +
Preference number: 4 (lower is better)
Translates to: SDDDCGSRQIPAVQAKLVGRVPM*SFQSLG
Trigger: TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC...TACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CCA 90 bp ACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCGGGCTGTGGGTGCTGTGCATGACTATGTaGCCTTGCCGAGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TKLQVPSMGSMIHVGLWVLCMTM*PCREVF
Trigger: GAAAACCTCTCGGCAAGGCCACATAGTCATGCACAG...CACCCACAGCCCGACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp CTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATTGCAATGAACCTGTGTaGAGGAAACCTCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: LRPGGRVPMWSFQSLGPHCNEPV*RKPLSQ
Trigger: TTGCGAGAGAGGTTTCCTTCACACAGGTTCATTGCA...ATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCGAACACGTACTAACCTaGAAAAGGCTACGTGAGATT +
Preference number: 4 (lower is better)
Translates to: APEARWQSANVELPITRTEHVLT*KRLREI
Trigger: AATCTCACGTAGCCTTTTTCAGGTTAGTACGTGTTC...GGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp GAATTCAAGCTCTTGTCGAACAGCAAATCCAATGCTAACCGCCACAGTCGGGAACACACTCCCTGTGCCTaGTCCCGCAGCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EFKLLSNSKSNANRHSREHTPCA*SRSSVP
Trigger: AGGCACAGAGCTGCGGGAGCAGGCACAGGGAGTGTG...TTCCCGACTGTGGCGGTTAGCATTGGATTTGCTGTTCGACAAGAGCTTGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp ATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGTATCTGTGCACAAAATTaGAGGTGCCGTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: MRLGMQQPLHVTQEQLQGICAQN*RCRRWG
Trigger: ACCCCATCGACGGCACCTGCAATTTTGTGCACAGAT...ACCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586230.1
ENST00000590107.5
CDS-3UTR GCA 90 bp TGCAATGAACCTTCTGCAGGCTGGTCCCTGTGGAGCTGGCCGCTGTTTACACCTACAGTCGGGAATCTGTaGACAAAATTGCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: CNEPSAGWSLWSWPLFTPTVGNL*TKLQVP
Trigger: CGGCACCTGCAATTTTGTGCACAGATTCCCGACTGT...AGGTGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGCAGAAGGTTCATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp GCATTCAGGGCAGTGCTTTTGACACTCTTGGACTGTCCCAAGTTCACTAAGGGTCCGAGATCGCCCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: AFRAVLLTLLDCPKFTKGPRSPH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGGGCGATCTCGG...ACCCTTAGTGAACTTGGGACAGTCCAAGAGTGTCAAAAGCACTGCCCTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp GTCTATCACGATGCCGCCTGCTTCTCTGATGATGACTGTGGCAGCCGCCAGATCTCGCAGGGTCACGTTTaGGGCCAATTTCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: VYHDAACFSDDDCGSRQISQGHV*GQFLSE
Trigger: TTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGA...GATCTGGCGGCTGCCACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR TCA 90 bp GGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTCGTCGATGGGGTCGATaGTCCACGTCGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GDLSFGPDRRTRTNLKKARRWGR*STSGCG
Trigger: CCCACAGCCCGACGTGGATCATCGACCCCATCGACG...AGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp GATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTACGCCACTCTGCAAGCCATaGGGTCGAGGGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: DLSFGPDRRTRTNLKKATPLCKP*GRGVHP
Trigger: CGGGTGGACCCCTCGACCTCATGGCTTGCAGAGTGG...CGTAGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp GGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTGCCAGGAGCAGAGCGTaGGCCACTGGCATGGAGCGT +
Preference number: 4 (lower is better)
Translates to: GDLSFGPDRRTRTNLKKAARSRA*ATGMER
Trigger: ACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTGGC...AGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp TCTGCAATGAACCTTCTGCAGGCTGGTCCCTGTGGAGCTGGCCGCTGTTTACACAAAAGGAGACCTGTGTaGAGGAAACCTCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: SAMNLLQAGPCGAGRCLHKRRPV*RKPLSQ
Trigger: TTGCGAGAGAGGTTTCCTTCACACAGGTCTCCTTTT...GTGTAAACAGCGGCCAGCTCCACAGGGACCAGCCTGCAGAAGGTTCATTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp CACAGTCGGGAATCTGTGCACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATTCAGGGCAGTGCTTTTaGCACTCTTGGACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HSRESVHKIAGAVDGVDDSGQCF*HSWTVP
Trigger: TGGGACAGTCCAAGAGTGTCAAAAGCACTGCCCTGA...ATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGATTCCCGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp GATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTACGGGACCCCATGCGCCTTaGCATGCAGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: DLSFGPDRRTRTNLKKATGPHAP*HAAAAP
Trigger: TGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCC...CGTAGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp CCTGTGGAGCTGGCCGCTGTTTACACCTTCCAAAGGCATTCTCAGGATCAAAGACATCTGTTCTGTGCATaGCTATGTGGCCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PVELAAVYTFQRHSQDQRHLFCA*LCGLAE
Trigger: CTCGGCAAGGCCACATAGTCATGCACAGAACAGATG...TCTTTGATCCTGAGAATGCCTTTGGAAGGTGTAAACAGCGGCCAGCTCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp GGGTCCACCCGAAGTGTCTATCACGATGCCGCCTGCTTCTCTGATGATGACTGTTGGATTTGCCAGTCATaGTTAAGGCACAGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSTRSVYHDAACFSDDDCWICQS*LRHRAN
Trigger: GTTTGCCCTGTGCCTTAATCATGACTGGCAAATCCA...ACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR GCA 90 bp CCTGTGGAGCTGGCCGCTGTTTACACCTTCCAAAGGCATTCTCAGGATCAAAGAACAGCCGCTCCTCTGTaGAGTGGTAAATCACTCCGA +
Preference number: 4 (lower is better)
Translates to: PVELAAVYTFQRHSQDQRTAAPL*SGKSLR
Trigger: TCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGT...TCTTTGATCCTGAGAATGCCTTTGGAAGGTGTAAACAGCGGCCAGCTCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp GGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTCCATCTCCCGGGTGCTaGCCGCAACCACTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GDLSFGPDRRTRTNLKKAPSPGC*PQPLCK
Trigger: CTTGCAGAGTGGTTGCGGCCAGCACCCGGGAGATGG...AGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp GGGAATCTGTGCACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCATGACTATGTGGCCTTaGCGAGAGGTTTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: GNLCTKLQVPSMGSMIHVMTMWP*REVFYP
Trigger: TGGATAGAAAACCTCTCGGCAAGGCCACATAGTCAT...GACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR TCA 90 bp TTTAAAAGGCCAGCCACTCACTGTAGCGTGACAACTCCCTCTGGGGTAGCCAGGATTTCACAGGAGATTTaGGTTTTGGCCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: FKRPATHCSVTTPSGVARISQEI*VLALTE
Trigger: TTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAAT...CCTGGCTACCCCAGAGGGAGTTGTCACGCTACAGTGAGTGGCTGGCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp ATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTCACACTCCCTGTGCCTaGTCCCGCAGCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: INTYFTGDLSFGPDRRTRHTPCA*SRSSVP
Trigger: AGGCACAGAGCTGCGGGAGCAGGCACAGGGAGTGTG...ACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp AGCTCTTGTCGAACAGCAAATCCAATGCTAACCGCCACAGTCGGGAATCTGTGCTCTATCCAGTTCCTGTaGCGGGTTCACATGTGTACT +
Preference number: 4 (lower is better)
Translates to: SSCRTANPMLTATVGNLCSIQFL*RVHMCT
Trigger: AGTACACATGTGAACCCGGCACAGGAACTGGATAGA...GCACAGATTCCCGACTGTGGCGGTTAGCATTGGATTTGCTGTTCGACAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CCA 90 bp TGGATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAAGCCCAGGGAGGCCTTaGGAGCAGCTTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: WIINTYFTGDLSFGPDRRSPGRP*EQLCLS
Trigger: GCTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCT...TCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
3UTR CAA 72 bp AGATCTAAAGCATTCAGGGCAGTGCTTTTGACACTCTaGGACTGTCCCAAGTTCACTAAGGGTGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RSKAFRAVLLTL*DCPKFTKGEAL
Trigger: CAAGGCCTCACCCTTAGTGAACTTGGGACAGTCCAAGAGTGTCAAAAGCACTGCCCTGAATGCTTTAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR GCA 90 bp ATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTCCTTGGGAGCAGCTTTaGCTCAGCCGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: INTYFTGDLSFGPDRRTRPWEQL*LSRSHF
Trigger: GAAGTGACTGCGGCTGAGGCAAAGCTGCTCCCAAGG...ACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp GATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTACGGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGA +
Preference number: 4 (lower is better)
Translates to: DLSFGPDRRTRTNLKKATGRVPM*SFQSLG
Trigger: TCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCC...CGTAGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp AAATCAAGATTGGATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCGCCCCTGAGGCCAGGTaGCAGAGTGCCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: KSRLDYQYVFHRRFEFWPAPEAR*QSANVE
Trigger: CTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGC...GGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CCA 90 bp AAATCAAGATTGGATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCCCATCTCCCGGGTGCTaGCCGCAACCACTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KSRLDYQYVFHRRFEFWPPSPGC*PQPLCK
Trigger: CTTGCAGAGTGGTTGCGGCCAGCACCCGGGAGATGG...GGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR GCA 90 bp ACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGACAGTCGGGAATCTGTaGACAAAATTGCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: TGDLSFGPDRRTRTNLKKTVGNL*TKLQVP
Trigger: CGGCACCTGCAATTTTGTGCACAGATTCCCGACTGT...CTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp GATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTACGGAACACGTACTAACCTaGAAAAGGCTACGTGAGATT +
Preference number: 4 (lower is better)
Translates to: DLSFGPDRRTRTNLKKATEHVLT*KRLREI
Trigger: AATCTCACGTAGCCTTTTTCAGGTTAGTACGTGTTC...CGTAGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp AAATCAAGATTGGATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCATCGTCTGTAAGGCCTaGGCTATGAGCATCGCCATC +
Preference number: 4 (lower is better)
Translates to: KSRLDYQYVFHRRFEFWPIVCKA*AMSIAI
Trigger: GATGGCGATGCTCATAGCTCAGGCCTTACAGACGAT...GGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp ACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGAACACCAAATCCTGGTaGGAGAGACGTCGATTTAAA +
Preference number: 4 (lower is better)
Translates to: TGDLSFGPDRRTRTNLKKNTKSW*ERRRFK
Trigger: TTTAAATCGACGTCTCTCTCACCAGGATTTGGTGTT...CTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR TCA 90 bp ACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGATTTCACAGGAGATTTaGGTTTTGGCCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: TGDLSFGPDRRTRTNLKKISQEI*VLALTE
Trigger: TTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAAT...CTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
3UTR CAA 72 bp CAAGATTGGATTATCAATACGTATTTCACAGGAGATTaGAGTTTTGGCCCTGACAGAAGAACACGTACTAAC +
Preference number: 4 (lower is better)
Translates to: QDWIINTYFTGD*SFGPDRRTRTN
Trigger: GTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS GCA 90 bp CCTGCTCCCGCAGCTCTGTGCCTAGTCCGCCGCCCGTCCCACACCTaGGCTGGCGGGAAGGGCAGCCAGCGGGCCGCGGGAGCCGTGCGT +
Preference number: 5 (lower is better)
Translates to: PAPAALCLVRRPSHT*AGGKGSQRAAGAVR
Trigger: ACGCACGGCTCCCGCGGCCCGCTGGCTGCCCTTCCCGCCAGCGCAGGTGTGGGACGGGCGGCGGACTAGGCACAGAGCTGCGGGAGCAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000625802.2
CDS CCA 90 bp TCCCGCAGCTCTGTGCCTAGTCCGCCGCCCGTCCCACACCTGCGCTaGCGGGAAGGGCAGCCAGCGGGCCGCGGGAGCCGTGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SRSSVPSPPPVPHLR*REGQPAGRGSRASC
Trigger: GCAGGACGCACGGCTCCCGCGGCCCGCTGGCTGCCCTTCCCGCCAGCGCAGGTGTGGGACGGGCGGCGGACTAGGCACAGAGCTGCGGGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000625802.2
CDS GCA 90 bp CCTGTGGTGCAGCATCACCCTCCCCGCTCGAGGCGGACCCAACCCTaGTCCGCCGTGCCCCGTCCCGCAGCGCGCAGAGCGGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: PVVQHHPPRSRRTQP*SAVPRPAARRAGSN
Trigger: GTTGGAGCCCGCTCTGCGCGCTGCGGGACGGGGCACGGCGGAGCAGGGTTGGGTCCGCCTCGAGCGGGGAGGGTGATGCTGCACCACAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588752.5
CDS GCA 90 bp ACCGGATCCCGCCGTCCCGCCGCCAGGCTCCACACTCCCTGTGCCTaGTCCCGCAGCTCTGTGCCTAGTCCGCCGCCCGTCCCACACCTG +
Preference number: 5 (lower is better)
Translates to: TGSRRPAARLHTPCA*SRSSVPSPPPVPHL
Trigger: CAGGTGTGGGACGGGCGGCGGACTAGGCACAGAGCTGCGGGAGCAGGCACAGGGAGTGTGGAGCCTGGCGGCGGGACGGCGGGATCCGGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269159.8
ENST00000383376.9
ENST00000590107.5
ENST00000625802.2
CDS-3UTR CAA 90 bp GGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCCGGACCCCATGCGCCTaGGCATGCAGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GAEREPLAWSVGHEGHLPRTPCA*ACSSRS
Trigger: GGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCG...GGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp CAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCTGGGTGAGCACACACTaGGCCCCAGAAGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: QEQSVSHWHGAWATRATSWVSTH*APEAAA
Trigger: GGCCGCGGCTTCTGGGGCCAAGTGTGTGCTCACCCA...GGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp CAGGAGCAGAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCAGCCCAGGGAGGCCTaGGGAGCAGCTTTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: QEQSVSHWHGAWATRATSQPREA*GAALPQ
Trigger: CTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCTG...GGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTCTGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp GCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCGGACCCCATGCGCCTaGGCATGCAGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: AGQTGNRHPRPLRPGGRVRTPCA*ACSSRS
Trigger: GGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCG...CACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS GCA 90 bp ATGATCTGGCCCCGCCCCTCTGGGCTAGCCCTGAACACAAATCAGTaGCGAGCCTGGTCCCTCTCCGCTCCGCGCTTTACCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: MIWPRPSGLALNTNQ*RAWSLSAPRFTSSP
Trigger: GGGGCTGGAGGTAAAGCGCGGAGCGGAGAGGGACCAGGCTCGGCACTGATTTGTGTTCAGGGCTAGCCCAGAGGGGCGGGGCCAGATCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588752.5
CDS-3UTR CAA 90 bp GAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGAGCTCAGAACCAAGGCCTTaGAGAGATCTGTCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: EREPLAWSVGHEGHLPRSSEPRP*RDLSPR
Trigger: CCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTGA...GCTCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp GAGCGTGAGCCACTGGCATGGAGCGTGGGCCACGAGGGCCACCTCCCCAGGAGCGTCGCAGGGTCACGTTaGGGGCCAATTTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: EREPLAWSVGHEGHLPRSVAGSR*GPISVR
Trigger: TCTGACAGAAATTGGCCCCAAACGTGACCCTGCGAC...GCTCCTGGGGAGGTGGCCCTCGTGGCCCACGCTCCATGCCAGTGGCTCACGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp GGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTCGGACCCCATGCGCCTaGGCATGCAGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GPHAPWHAAAAPCYSGTARTPCA*ACSSRS
Trigger: GGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCG...AGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp AGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCGCGATGAGGCAGGAGAATaGCTTGAACCTAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: SRWPLQKAPRPRRPVYSRDEAGE*LEPRMW
Trigger: CCACATCCTAGGTTCAAGCAATTCTCCTGCCTCATC...GCGGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CAA 90 bp AATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGCGGACCCCATGCGCCTaGGCATGCAGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: NHSDPMRLGMQQPLHVTQRTPCA*ACSSRS
Trigger: GGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCG...CTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS TCA 90 bp CCGTGTTCCGTTCTTCCTCCTCGGGCTGCAGGGTGTTCCCCGAACTaGACCTCCTACCCATGCGCCTTGGCATGCAGCAGCCGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PCSVLPPRAAGCSPN*TSYPCALACSSRSM
Trigger: CATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGTAGGAGGTTCAGTTCGGGGAACACCCTGCAGCCCGAGGAGGAAGAACGGAACACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 90 bp AATAGGCATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGACCCTGGGGAGAGGGAAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: NRHPRPLRPGGRVPM*SFQSLGPWGEGRED
Trigger: GTCCTCCCTTCCCTCTCCCCAGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589374.1
CDS-3UTR CAA 90 bp GGAGCCGCTGGCCATTGCAGAAGGCGCCCCGACCCCGCCGGCCCGTGTACAGCCCTGCAGCTGATGTTTTaGTTGAGACACGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GAAGHCRRRPDPAGPCTALQLMF*LRHVFP
Trigger: AGGAAAAACGTGTCTCAACAAAAACATCAGCTGCAG...GGCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383376.9
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp CCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCACAGCCCAGGGAGGCCTaGGGAGCAGCTTTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PHAPWHAAAAPCYSGTASQPREA*GAALPQ
Trigger: CTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCTG...TGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS CCA 90 bp GGGCTGCAGGGTGTTCCCCGAACTGAACCTCCTACCCATGCGCCTTaGCATGCAGCAGCCGCTCCATGTTACTCAGGAACAGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: GLQGVPRTEPPTHAP*HAAAAPCYSGTASG
Trigger: CCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGTAGGAGGTTCAGTTCGGGGAACACCCTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS-3UTR CAA 90 bp CCGACCCCGCCGGCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCAGGCAGGAGAATTGCTaGAACCTAGGATGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PTPPARVQPLLCAVVNHSRQENC*NLGCGG
Trigger: GCCTCCACATCCTAGGTTCAAGCAATTCTCCTGCCT...GGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGCCGGCGGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS TCA 90 bp GCCACCAACCAACAGGCCTCCGCCAGACGCAAATGCCTTGTGCCATaGCAGCTCCCAGCTGACCTAGCTACTGAGCACCTGAGATGCAGC +
Preference number: 5 (lower is better)
Translates to: ATNQQASARRKCLVP*QLPADLATEHLRCS
Trigger: GCTGCATCTCAGGTGCTCAGTAGCTAGGTCAGCTGGGAGCTGTCATGGCACAAGGCATTTGCGTCTGGCGGAGGCCTGTTGGTTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 90 bp TGCAGGCGGGCCCCTCACAGGGCTTCCCTGAGTCTGATGTTCATGTaGCCCTCCCACTCTTTCCACGTCAGGCTTCCTCCTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: CRRAPHRASLSLMFM*PSHSFHVRLPPQIP
Trigger: TGGGATTTGAGGAGGAAGCCTGACGTGGAAAGAGTGGGAGGGGCACATGAACATCAGACTCAGGGAAGCCCTGTGAGGGGCCCGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 90 bp CAGGTGCCCACGCATCTCCAGAGGCCTGGCTATAGGAGTATCTACTaGAGGCGGGCCCCTCACAGGGCTTCCCTGAGTCTGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: QVPTHLQRPGYRSIY*RRAPHRASLSLMFM
Trigger: CATGAACATCAGACTCAGGGAAGCCCTGTGAGGGGCCCGCCTGCAGTAGATACTCCTATAGCCAGGCCTCTGGAGATGCGTGGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS-3UTR CAA 90 bp CCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGTCAGAACCAAGGCCTTaGAGAGATCTGTCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: PDPSSAGQTGNRHPRPLRSEPRP*RDLSPR
Trigger: CCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTGA...CCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp GAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGGTCGCAGGGTCACGTTaGGGGCCAATTTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: ELPITRTPCALACSSRSMVAGSR*GPISVR
Trigger: TCTGACAGAAATTGGCCCCAAACGTGACCCTGCGAC...CATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp TTTGAGAGATCTGTCTCCCCGGAGACCCGGAGCCGCTGGCCATTGCAGAAGGCGGTCGCAGGGTCACGTTaGGGGCCAATTTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: FERSVSPETRSRWPLQKAVAGSR*GPISVR
Trigger: TCTGACAGAAATTGGCCCCAAACGTGACCCTGCGAC...CGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGATCTCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp CAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCCACACCCGCACCTCTaGTCGAACAGCAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: QPPDPSSAGQTGNRHPRPPHPHL*SNSKSN
Trigger: ATTGGATTTGCTGTTCGACAAGAGGTGCGGGTGTGG...GGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS-3UTR CAA 90 bp CATCCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCAAATCTGTGCACAAAATaGCAGGTGCCGTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: HPRPLRPGGRVPMWSFQSNLCTK*QVPSMG
Trigger: CCCCATCGACGGCACCTGCAATTTTGTGCACAGATT...TGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586230.1
ENST00000590107.5
CDS-3UTR CAA 90 bp CCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATGCGCCTAATCTGTGCACAAAATaGCAGGTGCCGTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: PGGRVPMWSFQSLGPHAPNLCTK*QVPSMG
Trigger: CCCCATCGACGGCACCTGCAATTTTGTGCACAGATT...AGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586230.1
ENST00000590107.5
CDS-3UTR CAA 90 bp GATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCGTCGCAGGGTCACGTTaGGGGCCAATTTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: DDCGSRQIPAVQAKLVIGVAGSR*GPISVR
Trigger: TCTGACAGAAATTGGCCCCAAACGTGACCCTGCGAC...GCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586230.1
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp AGCCGCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAGGGTCACGTTTGGGGAAGCTGTGCACAAAATaGCAGGTGCCGTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: SRSMLLRNSFRVAGSRLGKLCTK*QVPSMG
Trigger: CCCCATCGACGGCACCTGCAATTTTGTGCACAGCTT...CCCCAAACGTGACCCTGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590138.1
CDS GCA 90 bp CCTCACAGAAGAGGACATGTTAAGCCCTGCAATGGAGGCGATCCCTaGTCAGCTCACCTGTGCACAAAATTGCAGGTGCCGTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: PHRRGHVKPCNGGDP*SAHLCTKLQVPSMG
Trigger: CCCCATCGACGGCACCTGCAATTTTGTGCACAGGTGAGCTGAGCAGGGATCGCCTCCATTGCAGGGCTTAACATGTCCTCTTCTGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588863.1
CDS CCA 90 bp CACAGCACAGCCCTACTGGGAAGGCAAGAGACAAAGAGGATTCACTaGGCTTTGATAAACCTGTCTGACGCCAGGCCCCCTCGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: HSTALLGRQETKRIH*ALINLSDARPPREG
Trigger: TCCTTCCCGAGGGGGCCTGGCGTCAGACAGGTTTATCAAAGCCCAGTGAATCCTCTTTGTCTCTTGCCTTCCCAGTAGGGCTGTGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 90 bp AAGCACAGCACTTCTGCCAAAGCTCTGGAGGCTGAATATAGGGCCTaGAGCCACCAACCAACAGGCCTCCGCCAGACGCAAATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: KHSTSAKALEAEYRA*SHQPTGLRQTQMPC
Trigger: ACAAGGCATTTGCGTCTGGCGGAGGCCTGTTGGTTGGTGGCTCCAGGCCCTATATTCAGCCTCCAGAGCTTTGGCAGAAGTGCTGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589374.1
CDS-3UTR CAA 90 bp CCAGATCCCAGCAGTGCAGGCCAAACTGGTAATAGGCATCCGCGGCCCCTGAGGTCAAGAGGCTTGGATTaGCCAGTCATGATTAAGGCA +
Preference number: 5 (lower is better)
Translates to: PDPSSAGQTGNRHPRPLRSRGLD*PVMIKA
Trigger: TGCCTTAATCATGACTGGCAAATCCAAGCCTCTTGA...CCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS CCA 90 bp CGCCAGGCCCCCTCGGGAAGGACTGTAAGTATTTGCACCATTCGCTaGTTGAGCAGCATGAGGTCAGTTCCATGGATTCTGATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RQAPSGRTVSICTIR*LSSMRSVPWILIRS
Trigger: GCTTCTGATCAGAATCCATGGAACTGACCTCATGCTGCTCAACCAGCGAATGGTGCAAATACTTACAGTCCTTCCCGAGGGGGCCTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS-3UTR CAA 90 bp GAGCTTCCAATCACTCGGACCCCATGCGCCTTGGCATGCAGCAGCCGCTCCATGTCCGAATTCAAGCTCTaGTCGAACAGCAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: ELPITRTPCALACSSRSMSEFKL*SNSKSN
Trigger: ATTGGATTTGCTGTTCGACAAGAGCTTGAATTCGGA...CATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586230.1
CDS-3UTR CAA 90 bp CTGGCCGCAACCACTCTGCAAGCCATGAGGTCGAGGGGTCCACCCGAAGTGTCTTATTTCACAGGAGATTaGAGTTTTGGCCCTGACAGA +
Preference number: 5 (lower is better)
Translates to: LAATTLQAMRSRGPPEVSYFTGD*SFGPDR
Trigger: TCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATA...AGACACTTCGGGTGGACCCCTCGACCTCATGGCTTGCAGAGTGGTTGCGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS CCA 90 bp CCTTGGGCAGGCGCTAAGCAAACATCTGTTCTGTGCATGACTATGTaGCCTTGCCGAGAGGTTTTCTATCCAGTTCCTGTGCCGGGTTCA +
Preference number: 5 (lower is better)
Translates to: PWAGAKQTSVLCMTM*PCREVFYPVPVPGS
Trigger: TGAACCCGGCACAGGAACTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGCGCCTGCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CAA 90 bp GCCCGTGTACAGCCGCTCCTCTGTGCAGTGGTAAATCACTCCGAATTCAAGCTCCATGACTATGTGGCCTaGCCGAGAGGTTTTCTATCC +
Preference number: 5 (lower is better)
Translates to: ARVQPLLCAVVNHSEFKLHDYVA*PRGFLS
Trigger: GGATAGAAAACCTCTCGGCAAGGCCACATAGTCATG...GAGCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGGCTGTACACGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS GCA 90 bp GCAGGCGCTAAGCAAACATCTGTTCTGTGCATGACTATGTGGCCTTaGCGAGAGGTTTTCTATCCAGTTCCTGTGCCGGGTTCACATGTG +
Preference number: 5 (lower is better)
Translates to: AGAKQTSVLCMTMWP*REVFYPVPVPGSHV
Trigger: CACATGTGAACCCGGCACAGGAACTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGCGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS GCA 90 bp CAGCATGAGGTCAGTTCCATGGATTCTGATCAGAAGCAACACAGGTaGCCACGCATCTCCAGAGGCCTGGCTATAGGAGTATCTACTGCA +
Preference number: 5 (lower is better)
Translates to: QHEVSSMDSDQKQHR*PRISRGLAIGVSTA
Trigger: TGCAGTAGATACTCCTATAGCCAGGCCTCTGGAGATGCGTGGGCACCTGTGTTGCTTCTGATCAGAATCCATGGAACTGACCTCATGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS-3UTR CAA 90 bp CTGAGGCCAGGTGGCAGAGTGCCAATGTGGAGCTTCCAATCACTCGGACCCCATCTGCAGCTGATGTTTTaGTTGAGACACGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LRPGGRVPMWSFQSLGPHLQLMF*LRHVFP
Trigger: AGGAAAAACGTGTCTCAACAAAAACATCAGCTGCAG...ATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS-3UTR CAA 90 bp AACATCTGTTCTGTGCATGACTATGTGGCCTTGCCGAGAGGTTTTCTATCCAGTTGTAATCCCAATACTTaGGGAGGCCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: NICSVHDYVALPRGFLSSCNPNT*GGPGGW
Trigger: CCACCCGCCCGGGCCTCCCAAAGTATTGGGATTACA...ACTGGATAGAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CAA 90 bp TCTGATGATGACTGTGGCAGCCGCCAGATCCCAGCAGTGCAGGCCAAACTGGTACCGAATTCAAGAGGCTaGGATTTGCCAGTCATGATT +
Preference number: 5 (lower is better)
Translates to: SDDDCGSRQIPAVQAKLVPNSRG*DLPVMI
Trigger: AATCATGACTGGCAAATCCAAGCCTCTTGAATTCGG...TACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACAGTCATCATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS CCA 90 bp AGTATTTGCACCATTCGCTGGTTGAGCAGCATGAGGTCAGTTCCATaGATTCTGATCAGAAGCAACACAGGTGCCCACGCATCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SICTIRWLSSMRSVP*ILIRSNTGAHASPE
Trigger: CTCTGGAGATGCGTGGGCACCTGTGTTGCTTCTGATCAGAATCCATGGAACTGACCTCATGCTGCTCAACCAGCGAATGGTGCAAATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 90 bp AATCCTCCTCTACTGAACGTGACATTAAGTGTCAGTGGTCTCACATaGCTAGGGCTCACAGCACAGCCCTACTGGGAAGGCAAGAGACAA +
Preference number: 5 (lower is better)
Translates to: NPPLLNVTLSVSGLT*LGLTAQPYWEGKRQ
Trigger: TTGTCTCTTGCCTTCCCAGTAGGGCTGTGCTGTGAGCCCTAGCCATGTGAGACCACTGACACTTAATGTCACGTTCAGTAGAGGAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 90 bp CAGAGAATTGAATCCTCCTCTACTGAACGTGACATTAAGTGTCAGTaGTCTCACATGGCTAGGGCTCACAGCACAGCCCTACTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: QRIESSSTERDIKCQ*SHMARAHSTALLGR
Trigger: CCTTCCCAGTAGGGCTGTGCTGTGAGCCCTAGCCATGTGAGACCACTGACACTTAATGTCACGTTCAGTAGAGGAGGATTCAATTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS-3UTR CAA 90 bp GTCTATCACGATGCCGCCTGCTTCTCTGATGATGACTGTGGCAGCCGCCAGATCCTGCAGCTGATGTTTTaGTTGAGACACGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: VYHDAACFSDDDCGSRQILQLMF*LRHVFP
Trigger: AGGAAAAACGTGTCTCAACAAAAACATCAGCTGCAG...GATCTGGCGGCTGCCACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000590138.1
CDS TCA 90 bp AAGGCAAGAGACAAAGAGGATTCACTGGGCTTTGATAAACCTGTCTaGCGCCAGGCCCCCTCGGGAAGGACTGTAAGTATTTGCACCATT +
Preference number: 5 (lower is better)
Translates to: KARDKEDSLGFDKPV*RQAPSGRTVSICTI
Trigger: AATGGTGCAAATACTTACAGTCCTTCCCGAGGGGGCCTGGCGTCAGACAGGTTTATCAAAGCCCAGTGAATCCTCTTTGTCTCTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS-3UTR CAA 90 bp GCTAAGCAAACATCTGTTCTGTGCATGACTATGTGGCCTTGCCGAGAGGTTTTCAATCTGTGCACAAAATaGCAGGTGCCGTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: AKQTSVLCMTMWPCREVFNLCTK*QVPSMG
Trigger: CCCCATCGACGGCACCTGCAATTTTGTGCACAGATT...GAAAACCTCTCGGCAAGGCCACATAGTCATGCACAGAACAGATGTTTGCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CAA 90 bp GGGAATCTGTGCACAAAATTGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCTCCGAATTCAAGCTCTaGTCGAACAGCAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: GNLCTKLQVPSMGSMIHVSEFKL*SNSKSN
Trigger: ATTGGATTTGCTGTTCGACAAGAGCTTGAATTCGGA...GACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CAA 90 bp CCTGTGGAGCTGGCCGCTGTTTACACCTTCCAAAGGCATTCTCAGGATCAAAGATGTAATCCCAGCTACTaGGGAGGCTTAGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PVELAAVYTFQRHSQDQRCNPSY*GGLGGK
Trigger: TTTTCCTCCTAAGCCTCCCAAGTAGCTGGGATTACA...TCTTTGATCCTGAGAATGCCTTTGGAAGGTGTAAACAGCGGCCAGCTCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383376.9
CDS-3UTR CAA 90 bp GGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTTCAGAACCAAGGCCTTaGAGAGATCTGTCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: GDLSFGPDRRTRTNLKKASEPRP*RDLSPR
Trigger: CCGGGGAGACAGATCTCTCAAAGGCCTTGGTTCTGA...AGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp ATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACACGTAATCTGTGCACAAAATaGCAGGTGCCGTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: INTYFTGDLSFGPDRRTRNLCTK*QVPSMG
Trigger: CCCCATCGACGGCACCTGCAATTTTGTGCACAGATT...ACGTGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp GATTTGAGTTTTGGCCCTGACAGAAGAACACGTACTAACCTGAAAAAGGCTACGTCCGAATTCAAGCTCTaGTCGAACAGCAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: DLSFGPDRRTRTNLKKATSEFKL*SNSKSN
Trigger: ATTGGATTTGCTGTTCGACAAGAGCTTGAATTCGGA...CGTAGCCTTTTTCAGGTTAGTACGTGTTCTTCTGTCAGGGCCAAAACTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269159.8
CDS-3UTR CAA 90 bp ATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCTGACAGAAGAACATATTTCACAGGAGATTaGAGTTTTGGCCCTGACAGA +
Preference number: 5 (lower is better)
Translates to: IINTYFTGDLSFGPDRRTYFTGD*SFGPDR
Trigger: TCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATA...TGTTCTTCTGTCAGGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS-3UTR CAA 90 bp AAATCAAGATTGGATTATCAATACGTATTTCACAGGAGATTTGAGTTTTGGCCCCTGCAGCTGATGTTTTaGTTGAGACACGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KSRLDYQYVFHRRFEFWPLQLMF*LRHVFP
Trigger: AGGAAAAACGTGTCTCAACAAAAACATCAGCTGCAG...GGGCCAAAACTCAAATCTCCTGTGAAATACGTATTGATAATCCAATCTTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269159.8
ENST00000590107.5
CDS GCA 72 bp GCAGCTCTGTGCCTAGTCCGCCGCCCGTCCCACACCTaGGCTGGCGGGAAGGGCAGCCAGCGGGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: AALCLVRRPSHT*AGGKGSQRAAG
Trigger: TCCCGCGGCCCGCTGGCTGCCCTTCCCGCCAGCGCAGGTGTGGGACGGGCGGCGGACTAGGCACAGAGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000625802.2
CDS GCA 72 bp CAGCATCACCCTCCCCGCTCGAGGCGGACCCAACCCTaGTCCGCCGTGCCCCGTCCCGCAGCGCGCAGAGCG +
Preference number: 6 (lower is better)
Translates to: QHHPPRSRRTQP*SAVPRPAARRA
Trigger: CGCTCTGCGCGCTGCGGGACGGGGCACGGCGGAGCAGGGTTGGGTCCGCCTCGAGCGGGGAGGGTGATGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588752.5
ENST00000589238.5
CDS CCA 72 bp ATCTGTCCTGCCCGCAGCGCCAGCTGCACGGCCGCCTaGAAGCACTCCTCCCAGGGGCCGGCCGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: ICPARSASCTAA*KHSSQGPAASA
Trigger: GGCGCTGGCGGCCGGCCCCTGGGAGGAGTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGCAGGACAGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269159.8
ENST00000383376.9
ENST00000590107.5
ENST00000590138.1
ENST00000625802.2
CDS CCA 72 bp TCTGTGCCTAGTCCGCCGCCCGTCCCACACCTGCGCTaGCGGGAAGGGCAGCCAGCGGGCCGCGGGAGCCGT +
Preference number: 6 (lower is better)
Translates to: SVPSPPPVPHLR*REGQPAGRGSR
Trigger: ACGGCTCCCGCGGCCCGCTGGCTGCCCTTCCCGCCAGCGCAGGTGTGGGACGGGCGGCGGACTAGGCACAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590107.5
ENST00000625802.2
CDS GCA 72 bp GCTTTTCTGATGATCTGTCCTGCCCGCAGCGCCAGCTaGACGGCCGCCTGGAAGCACTCCTCCCAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: AFLMICPARSAS*TAAWKHSSQGP
Trigger: CGGCCCCTGGGAGGAGTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGCAGGACAGATCATCAGAAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269159.8
ENST00000383376.9
ENST00000590107.5
ENST00000590138.1
ENST00000625802.2
CDS GCA 72 bp CCCCGCCCCTCTGGGCTAGCCCTGAACACAAATCAGTaGCGAGCCTGGTCCCTCTCCGCTCCGCGCTTTACC +
Preference number: 6 (lower is better)
Translates to: PRPSGLALNTNQ*RAWSLSAPRFT
Trigger: GGTAAAGCGCGGAGCGGAGAGGGACCAGGCTCGGCACTGATTTGTGTTCAGGGCTAGCCCAGAGGGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588752.5
CDS CCA 72 bp CCGCGGCCCCTGAGGCCAGGTGGCAGAGTGCCAATGTaGAGCTTCCAATCACTCGGACCCTGGGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PRPLRPGGRVPM*SFQSLGPWGEG
Trigger: TCCCTCTCCCCAGGGTCCGAGTGATTGGAAGCTCCACATTGGCACTCTGCCACCTGGCCTCAGGGGCCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589374.1
CDS CCA 72 bp TCTGGGCTAGCCCTGAACACAAATCAGTGCCGAGCCTaGTCCCTCTCCGCTCCGCGCTTTACCTCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SGLALNTNQCRA*SLSAPRFTSSP
Trigger: GGGGCTGGAGGTAAAGCGCGGAGCGGAGAGGGACCAGGCTCGGCACTGATTTGTGTTCAGGGCTAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588752.5
CDS TCA 72 bp GTTCTTCCTCCTCGGGCTGCAGGGTGTTCCCCGAACTaGACCTCCTACCCATGCGCCTTGGCATGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VLPPRAAGCSPN*TSYPCALACSS
Trigger: GCTGCTGCATGCCAAGGCGCATGGGTAGGAGGTTCAGTTCGGGGAACACCCTGCAGCCCGAGGAGGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 72 bp ACAGATGCAGGCGGGAGTGGAGCCTTTTCTGTGGTGTaGAAGCCGACTTCAGCCAGGTACCCCGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: TDAGGSGAFSVV*KPTSARYPGWA
Trigger: TGCCCAGCCGGGGTACCTGGCTGAAGTCGGCTTGCACACCACAGAAAAGGCTCCACTCCCGCCTGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589374.1
CDS CCA 72 bp GGAGGACAGATGCAGGCGGGAGTGGAGCCTTTTCTGTaGTGTGCAAGCCGACTTCAGCCAGGTACCCCGGCT +
Preference number: 6 (lower is better)
Translates to: GGQMQAGVEPFL*CASRLQPGTPA
Trigger: AGCCGGGGTACCTGGCTGAAGTCGGCTTGCACACCACAGAAAAGGCTCCACTCCCGCCTGCATCTGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589374.1
CDS CAA 72 bp GAGGGGCCCTGGGGACCTGGGCCACACCCGCACCTCTaGTCGAACAGCAAATCCAATGCTAACCGCCACAGT +
Preference number: 6 (lower is better)
Translates to: EGPWGPGPHPHL*SNSKSNANRHS
Trigger: ACTGTGGCGGTTAGCATTGGATTTGCTGTTCGACAAGAGGTGCGGGTGTGGCCCAGGTCCCCAGGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590107.5
CDS CAA 90 bp CCCTGCAATGGAGGCGATCCCTGCTCAGCTCACCTGTGCACAAAATaGCAGGTGCCGTCGATGGGGTCGATGATCCACGTCGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PCNGGDPCSAHLCTK*QVPSMGSMIHVGLW
Trigger: CCACAGCCCGACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGGTGAGCTGAGCAGGGATCGCCTCCATTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588863.1
CDS GCA 72 bp ACGCATCTCCAGAGGCCTGGCTATAGGAGTATCTACTaGAGGCGGGCCCCTCACAGGGCTTCCCTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: THLQRPGYRSIY*RRAPHRASLSL
Trigger: CAGACTCAGGGAAGCCCTGTGAGGGGCCCGCCTGCAGTAGATACTCCTATAGCCAGGCCTCTGGAGATGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CAA 90 bp TCGATGGGGTCGATGATCCACGTCGGGCTGTGGGTGAGCACACACTaGGCCCCAGAAGCCGCGGCCTCTTCTGCAATGAACCTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: SMGSMIHVGLWVSTH*APEAAASSAMNLCE
Trigger: TTCACACAGGTTCATTGCAGAAGAGGCCGCGGCTTCTGGGGCCAAGTGTGTGCTCACCCACAGCCCGACGTGGATCATCGACCCCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269159.8
ENST00000588752.5
ENST00000588863.1
ENST00000588927.5
ENST00000589238.5
ENST00000590107.5
ENST00000590138.1
CDS TCA 72 bp CAACAGGCCTCCGCCAGACGCAAATGCCTTGTGCCATaGCAGCTCCCAGCTGACCTAGCTACTGAGCACCTG +
Preference number: 6 (lower is better)
Translates to: QQASARRKCLVP*QLPADLATEHL
Trigger: CAGGTGCTCAGTAGCTAGGTCAGCTGGGAGCTGTCATGGCACAAGGCATTTGCGTCTGGCGGAGGCCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 72 bp GCCCCTCACAGGGCTTCCCTGAGTCTGATGTTCATGTaGCCCTCCCACTCTTTCCACGTCAGGCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: APHRASLSLMFM*PSHSFHVRLPP
Trigger: AGGAGGAAGCCTGACGTGGAAAGAGTGGGAGGGGCACATGAACATCAGACTCAGGGAAGCCCTGTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 72 bp GGTGTTCCCCGAACTGAACCTCCTACCCATGCGCCTTaGCATGCAGCAGCCGCTCCATGTTACTCAGGAACA +
Preference number: 6 (lower is better)
Translates to: GVPRTEPPTHAP*HAAAAPCYSGT
Trigger: TGTTCCTGAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGTAGGAGGTTCAGTTCGGGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 72 bp TTTAGCAAGTCCGTGTTCCGTTCTTCCTCCTCGGGCTaGAGGGTGTTCCCCGAACTGAACCTCCTACCCATG +
Preference number: 6 (lower is better)
Translates to: FSKSVFRSSSSG*RVFPELNLLPM
Trigger: CATGGGTAGGAGGTTCAGTTCGGGGAACACCCTGCAGCCCGAGGAGGAAGAACGGAACACGGACTTGCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CAA 72 bp CTGACGCCAGGCCCCCTCGGGAAGGACTGTAAGTATTaGCACCATTCGCTGGTTGAGCAGCATGAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: LTPGPLGKDCKY*HHSLVEQHEVS
Trigger: ACTGACCTCATGCTGCTCAACCAGCGAATGGTGCAAATACTTACAGTCCTTCCCGAGGGGGCCTGGCGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 72 bp GCCCTACTGGGAAGGCAAGAGACAAAGAGGATTCACTaGGCTTTGATAAACCTGTCTGACGCCAGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: ALLGRQETKRIH*ALINLSDARPP
Trigger: AGGGGGCCTGGCGTCAGACAGGTTTATCAAAGCCCAGTGAATCCTCTTTGTCTCTTGCCTTCCCAGTAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 72 bp GGTCTCACATGGCTAGGGCTCACAGCACAGCCCTACTaGGAAGGCAAGAGACAAAGAGGATTCACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GLTWLGLTAQPY*EGKRQRGFTGL
Trigger: AAGCCCAGTGAATCCTCTTTGTCTCTTGCCTTCCCAGTAGGGCTGTGCTGTGAGCCCTAGCCATGTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 72 bp CTACTGAACGTGACATTAAGTGTCAGTGGTCTCACATaGCTAGGGCTCACAGCACAGCCCTACTGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LLNVTLSVSGLT*LGLTAQPYWEG
Trigger: GCCTTCCCAGTAGGGCTGTGCTGTGAGCCCTAGCCATGTGAGACCACTGACACTTAATGTCACGTTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 72 bp ACCATTCGCTGGTTGAGCAGCATGAGGTCAGTTCCATaGATTCTGATCAGAAGCAACACAGGTGCCCACGCA +
Preference number: 6 (lower is better)
Translates to: TIRWLSSMRSVP*ILIRSNTGAHA
Trigger: TGCGTGGGCACCTGTGTTGCTTCTGATCAGAATCCATGGAACTGACCTCATGCTGCTCAACCAGCGAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CAA 90 bp CGCTCCATGTTACTCAGGAACAGCTTCAGGGTCGCAGGGTCACGTTaGGGGCCAATTTCTGTCAGAACCAAGGCCTTTGAGAGATTCATG +
Preference number: 6 (lower is better)
Translates to: RSMLLRNSFRVAGSR*GPISVRTKAFERFM
Trigger: CATGAATCTCTCAAAGGCCTTGGTTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGACCCTGAAGCTGTTCCTGAGTAACATGGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586230.1
CDS TCA 72 bp GACAAAGAGGATTCACTGGGCTTTGATAAACCTGTCTaGCGCCAGGCCCCCTCGGGAAGGACTGTAAGTATT +
Preference number: 6 (lower is better)
Translates to: DKEDSLGFDKPV*RQAPSGRTVSI
Trigger: AATACTTACAGTCCTTCCCGAGGGGGCCTGGCGTCAGACAGGTTTATCAAAGCCCAGTGAATCCTCTTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 72 bp CAGCTCCCAGCTGACCTAGCTACTGAGCACCTGAGATaGAGCAACCAGAGAATTGAATCCTCCTCTACTGAA +
Preference number: 6 (lower is better)
Translates to: QLPADLATEHLR*SNQRIESSSTE
Trigger: TTCAGTAGAGGAGGATTCAATTCTCTGGTTGCTGCATCTCAGGTGCTCAGTAGCTAGGTCAGCTGGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS CCA 72 bp GAATCCTCCTCTACTGAACGTGACATTAAGTGTCAGTaGTCTCACATGGCTAGGGCTCACAGCACAGCCCTA +
Preference number: 6 (lower is better)
Translates to: ESSSTERDIKCQ*SHMARAHSTAL
Trigger: TAGGGCTGTGCTGTGAGCCCTAGCCATGTGAGACCACTGACACTTAATGTCACGTTCAGTAGAGGAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588167.1
CDS GCA 72 bp TGTGGCCTTGCCGAGAGGTTTTCTATCCAGTTCCTGTaGCGGGTTCACATGTGTACTAGAGAAAAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: CGLAERFSIQFL*RVHMCTREKGD
Trigger: GTCTCCTTTTTCTCTAGTACACATGTGAACCCGGCACAGGAACTGGATAGAAAACCTCTCGGCAAGGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383376.9