RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IMP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000136718

Ensembl transcript IDs: ENST00000259239.8, ENST00000409649.5, ENST00000409935.5, ENST00000428740.5, ENST00000452955.1, ENST00000456713.1, ENST00000460100.1, ENST00000460766.5, ENST00000462357.1, ENST00000462392.5, ENST00000464432.5, ENST00000470672.1, ENST00000473689.5, ENST00000475074.1, ENST00000477375.5, ENST00000490895.5, ENST00000495606.5

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCAGCAGATCGGTGACGCCGTTGGCTTTGCAGGCTCGCACCAGTaGCCCCACTTCATGTCGACCTCGGTTCATTCGCTGGGCGCCCGG +
Preference number: 1 (lower is better)
Translates to: DQQIGDAVGFAGSHQ*PHFMSTSVHSLGAR
Trigger: CCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
3UTR CCA 90 bp GCTGCTGAGCACTGGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTaGCGGCTTCCACTCAGTGAGTTAACTTGGTGGGCTGCCCCTGAC +
Preference number: 1 (lower is better)
Translates to: AAEHWVWPVPSALAH*RLPLSELTWWAAPD
Trigger: GTCAGGGGCAGCCCACCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCCAGTGCTCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 90 bp CCCCACCCAAAGGGATCCCATGGGCTTTGCCCTGCAGACTTGGCCTaGCCACTCAGAGGCAGGCGGGGCCATGACACAGACGGTTTATTC +
Preference number: 1 (lower is better)
Translates to: PHPKGSHGLCPADLA*PLRGRRGHDTDGLF
Trigger: GAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGGTCAGGCCAAGTCTGCAGGGCAAAGCCCATGGGATCCCTTTGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 90 bp TTGCCCTGCAGACTTGGCCTGACCACTCAGAGGCAGGCGGGGCCATaGCACAGACGGTTTATTCAGACCTCTCCACCCGCCACAGTTCCA +
Preference number: 1 (lower is better)
Translates to: LPCRLGLTTQRQAGP*HRRFIQTSPPATVP
Trigger: TGGAACTGTGGCGGGTGGAGAGGTCTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGGTCAGGCCAAGTCTGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 90 bp AGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTaGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: SVLTRCSGRLSCVRY*CKGASATPRLLWPP
Trigger: AGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
3UTR CCA 90 bp GCTCGCACCAGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGCAAACATCTTG +
Preference number: 1 (lower is better)
Translates to: ARTSAPTSCRPRFIR*APGNTSFSSFANIL
Trigger: CAAGATGTTTGCAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456713.1
3UTR TCA 90 bp TTCAGCAGGCCATTCTGTGACAGTTCCTACTGGTGGGTCTGTCTATaGCAGCCCCATCCTGAGTTCCAAGTCCATGTCCTGACTGAGTGG +
Preference number: 1 (lower is better)
Translates to: FSRPFCDSSYWWVCL*QPHPEFQVHVLTEW
Trigger: CCACTCAGTCAGGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGTCACAGAATGGCCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 90 bp GCTACCCACATCTGCCTGCTGAAGAGCTCATATGACCCTCACTCTTaGGGGGACGTTAGCATCAAATCTCTCTCTCTGTTAACCCCCACA +
Preference number: 1 (lower is better)
Translates to: ATHICLLKSSYDPHS*GDVSIKSLSLLTPT
Trigger: TGTGGGGGTTAACAGAGAGAGAGATTTGATGCTAACGTCCCCTCAAGAGTGAGGGTCATATGAGCTCTTCAGCAGGCAGATGTGGGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 90 bp TGTTGGCAACAATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTaGGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATGGCGG +
Preference number: 1 (lower is better)
Translates to: CWQQCGEKGTLVNCW*EWKLVQPLWKTVWR
Trigger: CCGCCATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 90 bp GTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATaGCCCGGTGTATGCAAAAATGCTCAGTATCACCAACCGTTAGGG +
Preference number: 1 (lower is better)
Translates to: VSKLYKGLKSTTKNK*PGVCKNAQYHQPLG
Trigger: CCCTAACGGTTGGTGATACTGAGCATTTTTGCATACACCGGGTCATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR GCA 90 bp ACTCAAGTCAACAACAAAGAACAAATGACCCGGTGTATGCAAAAATaGTCAGTATCACCAACCGTTAGGGAAATGCAAATCAAAACCGCA +
Preference number: 1 (lower is better)
Translates to: TQVNNKEQMTRCMQK*SVSPTVREMQIKTA
Trigger: TGCGGTTTTGATTTGCATTTCCCTAACGGTTGGTGATACTGAGCATTTTTGCATACACCGGGTCATTTGTTCTTTGTTGTTGACTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 90 bp TTTGCAAACCATGTATCTGGTAAAGGGTTACTATCTGTCTCAACTTaGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACAAC +
Preference number: 1 (lower is better)
Translates to: FANHVSGKGLLSVST*AVLTKYHRLGSLNN
Trigger: GTTGTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGATAGTAACCCTTTACCAGATACATGGTTTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 90 bp TTAATGTCTATCTTGAGGAGCTTCTCAATGGCTATATCTACAGAGTaGGAAAAACTATTTGCAAACCATGTATCTGGTAAAGGGTTACTA +
Preference number: 1 (lower is better)
Translates to: LMSILRSFSMAISTE*EKLFANHVSGKGLL
Trigger: TAGTAACCCTTTACCAGATACATGGTTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGAAGCTCCTCAAGATAGACATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTGCCCCTGACACAGGCTaGCCCTGCTACCCACATCTG +
Preference number: 2 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSAPDTG*PCYPHL
Trigger: CAGATGTGGGTAGCAGGGCCAGCCTGTGTCAGGGGC...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp AACGACCAGCAGATCGGTGACGCCGTTGGCTTTGCAGGCTCGCACCAGTGCCCCCCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGC +
Preference number: 2 (lower is better)
Translates to: NDQQIGDAVGFAGSHQCPPRFIR*APGNTS
Trigger: GCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGG...GGGGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCGTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000456713.1
3UTR-3UTR TCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTAGGCAGGCGGGGCCATaGCACAGACGGTTTATTCAG +
Preference number: 2 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSRQAGP*HRRFIQ
Trigger: CTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCT...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CAA 90 bp GAGGAATCAGCTGCTGAGCACTGGGTGTGGCCTGTCCCCTCCGCGTaGGCACACTGGCGGCTTCCACTCAGTGAGTTAACTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: EESAAEHWVWPVPSA*AHWRLPLSELTWWA
Trigger: AGCCCACCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCCAGTGCTCAGCAGCTGATTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp CTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGACTCCACGTCTGCTGTaGCCTCCTGCTCCAGCGTGC +
Preference number: 2 (lower is better)
Translates to: LGAQEDSLACGIGVRVPATPRLL*PPAPAC
Trigger: GCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGT...CGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
3UTR-3UTR CCA 90 bp CCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAACTTGGTTTGCCCTGCAGACTTaGCCTGACCACTCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: PVPSALAHWRLPLSELTWFALQT*PDHSEA
Trigger: TGCCTCTGAGTGGTCAGGCCAAGTCTGCAGGGCAAA...CCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR TCA 90 bp CTTGAGGAGCTTCTCAATGGCTATATCTACAGAGTGGGAAAAACTATTTGCAAACCTGCAGACTTGGCCTaGCCACTCAGAGGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: LEELLNGYIYRVGKTICKPADLA*PLRGRR
Trigger: CCGCCTGCCTCTGAGTGGTCAGGCCAAGTCTGCAGG...TTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGAAGCTCCTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR TCA 90 bp CCTCGGGCATCTTTTATAAGAGCACTAATTCTATGCAAGAGGGCAGAGTCCTCAGCTGAAGAGCTCATATaGCCCTCACTCTTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PRASFIRALILCKRAESSAEELI*PSLLRG
Trigger: TCCCCTCAAGAGTGAGGGTCATATGAGCTCTTCAGC...TGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCTTATAAAAGATGCCCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR GCA 90 bp ATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTGAGAATGGAAATTAGTACAGACACAGGCTGGCCCTaGTACCCACATCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: MWRKGNPSELLVRMEISTDTGWP*YPHLPA
Trigger: AGCAGGCAGATGTGGGTAGCAGGGCCAGCCTGTGTC...TGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATCTGTCCCCTCCGCGTTaGCACACTGGCGGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNLSPPR*HTGGFH
Trigger: GTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAG...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATTCAGCTGCTGAGCACTaGGTGTGGCCTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNSAAEH*VWPVPS
Trigger: GGAGGGGACAGGCCACACCCAGTGCTCAGCAGCTGA...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR TCA 90 bp ACACAAGATAAAGAATGTTGGCAACAATGTGGAGAAAAGGGAACCCTAGTGAACTGGTGGGTCTGTCTATaGCAGCCCCATCCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: TQDKECWQQCGEKGTLVNWWVCL*QPHPEF
Trigger: GAACTCAGGATGGGGCTGTCATAGACAGACCCACCA...GTTCACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACATTCTTTATCTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACCTGGGAAGTCCAAGATaGTGGCTCCAGCAGATTCAG +
Preference number: 2 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNLGSPR*WLQQIQ
Trigger: CTGAATCTGCTGGAGCCACCATCTTGGACTTCCCAG...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp CTTGAGGAGCTTCTCAATGGCTATATCTACAGAGTGGGAAAAACTATTTGCAAACACAGCTCTGGAGGCTaGGAAGTCCAAGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: LEELLNGYIYRVGKTICKHSSGG*EVQDGG
Trigger: GCCACCATCTTGGACTTCCCAGCCTCCAGAGCTGTG...TTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGAAGCTCCTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR GCA 90 bp AGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATGGCGGTTCCTCAAAAACCATGGGCTTTGCCCTaGAGACTTGGCCTGACCACT +
Preference number: 2 (lower is better)
Translates to: RMEISTAFMENSMAVPQKPWALP*RLGLTT
Trigger: AGTGGTCAGGCCAAGTCTGCAGGGCAAAGCCCATGG...TTTTTGAGGAACCGCCATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR TCA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAAGCGGCTTCCACTCAGTaGGTTAACTTGGTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQAASTQ*VNLVGC
Trigger: GCAGCCCACCAAGTTAACTCACTGAGTGGAAGCCGC...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR GCA 90 bp ATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTGAGAATGGAAATTAGTACACCTGCTACCCACATCTaGCTGCTGAAGAGCTCATAT +
Preference number: 2 (lower is better)
Translates to: MWRKGNPSELLVRMEISTPATHI*LLKSSY
Trigger: ATATGAGCTCTTCAGCAGGCAGATGTGGGTAGCAGG...TGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR TCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATATGACAGCCCCATCCTaGGTTCCAAGTCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNMTAPS*VPSPCP
Trigger: AGGACATGGACTTGGAACTCAGGATGGGGCTGTCAT...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAAAGTGAGTTAACTTGGTaGGCTGCCCCTGACACAGGC +
Preference number: 2 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQSELTW*AAPDTG
Trigger: GCCTGTGTCAGGGGCAGCCCACCAAGTTAACTCACT...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR GCA 90 bp ATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTGAGAATGGAAATTAGTACATACTCCCATGTTTACTaGAGCATTTCCACAACTGCC +
Preference number: 2 (lower is better)
Translates to: MWRKGNPSELLVRMEISTYSHVY*SISTTA
Trigger: GGCAGTTGTGGAAATGCTGCAGTAAACATGGGAGTA...TGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CCA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAACTCAGTGAGTTAACTTaGTGGGCTGCCCCTGACACA +
Preference number: 2 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQLSELT*WAAPDT
Trigger: TGTGTCAGGGGCAGCCCACCAAGTTAACTCACTGAG...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CAA 90 bp AGAATGTTGGCAACAATGTGGAGAAAAGGGAACCCTAGTGAACTGTaGGTGAGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATG +
Preference number: 2 (lower is better)
Translates to: RMLATMWRKGNPSEL*VRMEISTAFMENSM
Trigger: CATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR GCA 72 bp AGGTCCCCACCCAAAGGGATCCCATGGGCTTTGCCCTaGAGACTTGGCCTGACCACTCAGAGGCAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: RSPPKGIPWALP*RLGLTTQRQAG
Trigger: CCCCGCCTGCCTCTGAGTGGTCAGGCCAAGTCTGCAGGGCAAAGCCCATGGGATCCCTTTGGGTGGGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 72 bp AAGGGATCCCATGGGCTTTGCCCTGCAGACTTGGCCTaGCCACTCAGAGGCAGGCGGGGCCATGACACAGAC +
Preference number: 3 (lower is better)
Translates to: KGSHGLCPADLA*PLRGRRGHDTD
Trigger: GTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGGTCAGGCCAAGTCTGCAGGGCAAAGCCCATGGGATCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 72 bp CACTGGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTaGCGGCTTCCACTCAGTGAGTTAACTTGGTGGGCT +
Preference number: 3 (lower is better)
Translates to: HWVWPVPSALAH*RLPLSELTWWA
Trigger: AGCCCACCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR GCA 72 bp ATCGGTGACGCCGTTGGCTTTGCAGGCTCGCACCAGTaGCCCCACTTCATGTCGACCTCGGTTCATTCGCTG +
Preference number: 3 (lower is better)
Translates to: IGDAVGFAGSHQ*PHFMSTSVHSL
Trigger: CAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCACCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
3UTR CCA 72 bp CACTTACATGAGGAATCAGCTGCTGAGCACTGGGTGTaGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTT +
Preference number: 3 (lower is better)
Translates to: HLHEESAAEHWV*PVPSALAHWRL
Trigger: AAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCCAGTGCTCAGCAGCTGATTCCTCATGTAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 72 bp AGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: SAPTSCRPRFIR*APGNTSFSSFA
Trigger: TGCAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456713.1
3UTR-3UTR CAA 90 bp AGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTGGGCGCCCGGGAACACCTCCTTTGCAAACATCTaGAGGCGGGAACTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: SAPTSCRPRFIRWAPGNTSFANI*RRELGS
Trigger: AGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGA...GGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456713.1
3UTR GCA 72 bp GTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTaGGGTATTGGTGTAAGGGTGCCAGCGCCACTCCAC +
Preference number: 3 (lower is better)
Translates to: VCSLGAQEDSLA*GIGVRVPAPLH
Trigger: GTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
3UTR CCA 72 bp AGTGAGTTAACTTGGTGGGCTGCCCCTGACACAGGCTaGCCCTGCTACCCACATCTGCCTGCTGAAGAGCTC +
Preference number: 3 (lower is better)
Translates to: SELTWWAAPDTG*PCYPHLPAEEL
Trigger: GAGCTCTTCAGCAGGCAGATGTGGGTAGCAGGGCCAGCCTGTGTCAGGGGCAGCCCACCAAGTTAACTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 72 bp ACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTaGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: TRCSGRLSCVRY*CKGASATPRLL
Trigger: CAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
3UTR GCA 72 bp GTGAGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTaGGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACT +
Preference number: 3 (lower is better)
Translates to: VSVLTRCSGRLS*VRYWCKGASAT
Trigger: AGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
3UTR CCA 72 bp GGTTCACAGATGGTAGCTTCTAGCTGTGTCCTCACATaGCAGGAGGGGCAAAAGAGCTCCCTCGGGCATCTT +
Preference number: 3 (lower is better)
Translates to: GSQMVASSCVLT*QEGQKSSLGHL
Trigger: AAGATGCCCGAGGGAGCTCTTTTGCCCCTCCTGCCATGTGAGGACACAGCTAGAAGCTACCATCTGTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 72 bp CCACAGTTCCACATCCCAGTTCAGCAGGCCATTCTGTaGCAGTTCCTACTGGTGGGTCTGTCTATGACAGCC +
Preference number: 3 (lower is better)
Translates to: PQFHIPVQQAIL*QFLLVGLSMTA
Trigger: GGCTGTCATAGACAGACCCACCAGTAGGAACTGTCACAGAATGGCCTGCTGAACTGGGATGTGGAACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 72 bp CCATTCTGTGACAGTTCCTACTGGTGGGTCTGTCTATaGCAGCCCCATCCTGAGTTCCAAGTCCATGTCCTG +
Preference number: 3 (lower is better)
Translates to: PFCDSSYWWVCL*QPHPEFQVHVL
Trigger: CAGGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGTCACAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CAA 90 bp ATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTGAGAATGGAAATTAGTACAGGGATCCCATGGGCTTaGCCCTGCAGACTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: MWRKGNPSELLVRMEISTGIPWA*PCRLGL
Trigger: CAGGCCAAGTCTGCAGGGCAAAGCCCATGGGATCCC...TGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR GCA 72 bp CTCCCTCGGGCATCTTTTATAAGAGCACTAATTCTATaGAAGAGGGCAGAGTCCTCAGGACCTAATCGCTTC +
Preference number: 3 (lower is better)
Translates to: LPRASFIRALIL*KRAESSGPNRF
Trigger: GAAGCGATTAGGTCCTGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCTTATAAAAGATGCCCGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 72 bp ATCTGCCTGCTGAAGAGCTCATATGACCCTCACTCTTaGGGGGACGTTAGCATCAAATCTCTCTCTCTGTTA +
Preference number: 3 (lower is better)
Translates to: ICLLKSSYDPHS*GDVSIKSLSLL
Trigger: TAACAGAGAGAGAGATTTGATGCTAACGTCCCCTCAAGAGTGAGGGTCATATGAGCTCTTCAGCAGGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR TCA 72 bp CATGTTTACTGCAGCATTTCCACAACTGCCAAACTATaGAAACGACCTAAGTGTCTATTGGTGGACGGATTG +
Preference number: 3 (lower is better)
Translates to: HVYCSISTTAKL*KRPKCLLVDGL
Trigger: CAATCCGTCCACCAATAGACACTTAGGTCGTTTTCATAGTTTGGCAGTTGTGGAAATGCTGCAGTAAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CCA 72 bp CATGTATCTGGTAAAGGGTTACTATCTGTCTCAACTTaGGCTGTTCTAACAAAATACCACAGACTGGGTAGC +
Preference number: 3 (lower is better)
Translates to: HVSGKGLLSVST*AVLTKYHRLGS
Trigger: GCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGATAGTAACCCTTTACCAGATACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR-3UTR CAA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACAACCCTAGTGAACTGTaGGTGAGAATGGAAATTAGT +
Preference number: 3 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNNPSEL*VRMEIS
Trigger: ACTAATTTCCATTCTCACCAACAGTTCACTAGGGTT...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp GTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCGCGCCACTCCACGTCTaGTGTGGCCTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRVPAPLHVCCGLLLQRAAPLHV*CGLLLQ
Trigger: CTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGC...GGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GTCGACCTCGGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGTCCTGGGCTGAGCGCTaGGCCTCCTCCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VDLGSFAGRPGTPASAPLSWAER*ASSRAL
Trigger: CAAGGCCCGGGAGGAGGCGCAGCGCTCAGCCCAGGA...CAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTCCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSPRFIR*APGNTS
Trigger: GCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGG...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp TGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGGCTTGGCCTCCGACATaGTGCCCAGGTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: CQRHSTSAVASCSSVPRRAWPPT*CPGLGC
Trigger: ACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGC...CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTCTGTCCCCTCCGCGTTaGCACACTGGCGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSLSPPR*HTGGFH
Trigger: GTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAG...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp GGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: GVRVPAPLHVCCGLLLQRVPRCS*TTSRSV
Trigger: CACCGATCTGCTGGTCGTTCACGAGCATCGGGGCAC...ACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCTCTGCTGTGGCCTCCTaGTCCAGCGTGCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: ACGIGVRVPAPLHVCCGLSAVAS*SSVPRR
Trigger: CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGA...GAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp AGGCTCGCACCAGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTGGGCGCCCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: RLAPVPPLHVDLGSFAGRPRFIR*APGNTS
Trigger: GCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGG...GCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CCA 90 bp GGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGACCATGGTGCCCAGGTCTaGGATGTCATGCCGCATGAC +
Preference number: 4 (lower is better)
Translates to: GASATPRLLWPPAPACPDHGAQV*DVMPHD
Trigger: GTCATGCGGCATGACATCCCAGACCTGGGCACCATG...GTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGATCTTGCGTGCGGTATTaGTGTAAGGGTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GCQRHSTSAVASCSSVPRSCVRY*CKGASA
Trigger: GGCGCTGGCACCCTTACACCAATACCGCACGCAAGA...TCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp TGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGGTAGTCGTCCTGGTTTaGGAAGGTGATGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: CQRHSTSAVASCSSVPRRVVVLV*EGDDPV
Trigger: CACCGGGTCATCACCTTCGCAAACCAGGACGACTAC...CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp TCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCGCTCCTTCCTCTCCTaGGCTGAGCGCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCVRYWCKGASATPRLLWRSFLS*AERCAS
Trigger: GGAGGCGCAGCGCTCAGCCCAGGAGAGGAAGGAGCG...CCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GIGVRVPAPLHVCCGLLLPRFIR*APGNTS
Trigger: GCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGG...GAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: VWPVPSALAHWRLPLSELVPRCS*TTSRSV
Trigger: CACCGATCTGCTGGTCGTTCACGAGCATCGGGGCAC...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp GTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCGCAGCATCTTGAGTaGCGCTTCCACGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VRYWCKGASATPRLLWPPAQHLE*RFHVGP
Trigger: CGGACCCACGTGGAAGCGGCACTCAAGATGCTGCGC...AGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GTTGGCTTTGCAGGCTCGCACCAGTGCCCCCACTTCATGTCGACCTCGGTTCATCCTCCTCCCGGGCCTTaGGGTACAGGTACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: VGFAGSHQCPHFMSTSVHPPPGP*GTGTRG
Trigger: GCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGG...ATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAGCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR GCA 90 bp TGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGGGGATCCTCGACTCCTaGCCATCGGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: CQRHSTSAVASCSSVPRRGILDS*PSVFII
Trigger: GATGATGAATACCGATGGGCAGGAGTCGAGGATCCC...CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTGGCCTCCGACATGGTaGCCAGGTCTGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSWPPTW*PGLGCH
Trigger: ATGACATCCCAGACCTGGGCACCATGTCGGAGGCCA...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTCCATGGGCTTTGCCCTaGAGACTTGGCCTGACCACT +
Preference number: 4 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSPWALP*RLGLTT
Trigger: AGTGGTCAGGCCAAGTCTGCAGGGCAAAGCCCATGG...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCCGTGTGTGATGAGGTaGGGCTTGGCCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: ACGIGVRVPAPLHVCCGLPCVMR*GLASDM
Trigger: CATGTCGGAGGCCAAGCCCCACCTCATCACACACGG...GAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp GTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCAGTCCATGTCCTGACTaGGTGGTGAGTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: VRVPAPLHVCCGLLLQRASPCPD*VVSVLT
Trigger: AGTGAGCACACTCACCACTCAGTCAGGACATGGACT...GGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTGGTGGGTCTGTCTATaGCAGCCCCATCCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSWWVCL*QPHPEF
Trigger: GAACTCAGGATGGGGCTGTCATAGACAGACCCACCA...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTCCTGGGCTGAGCGCTaGGCCTCCTCCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSWAER*ASSRAL
Trigger: CAAGGCCCGGGAGGAGGCGCAGCGCTCAGCCCAGGA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp TGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGTCCTGGGCTGAGCGCTaGGCCTCCTCCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CSLGAQEDSLACGIGVRVSWAER*ASSRAL
Trigger: CAAGGCCCGGGAGGAGGCGCAGCGCTCAGCCCAGGA...CACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGCAAACATCTCGCTCCTTCCTCTCCTaGGCTGAGCGCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSFAGRPGTPASAPLQTSRSFLS*AERCAS
Trigger: GGAGGCGCAGCGCTCAGCCCAGGAGAGGAAGGAGCG...AGATGTTTGCAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CCA 90 bp GGGTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTAAGGTGATGACCCGGTaGCTGTCATCTTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: GCGLSPPRWHTGGFHSVSKVMTR*LSSLGT
Trigger: CGTGCCCAAAGATGACAGCCACCGGGTCATCACCTT...ACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCACTCCACGTCTGCTGTaGCCTCCTGCTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: DSLACGIGVRVPAPLHVCTPRLL*PPAPAC
Trigger: GCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGT...GCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
3UTR CAA 72 bp GCTGCTGAGCACTGGGTGTGGCCTGTCCCCTCCGCGTaGGCACACTGGCGGCTTCCACTCAGTGAGTTAACT +
Preference number: 4 (lower is better)
Translates to: AAEHWVWPVPSA*AHWRLPLSELT
Trigger: AGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACACCCAGTGCTCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp TCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCACGCGGCGCAGCATCTTaGGTGCCGCTTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: SLGAQEDSLACGIGVRVPRGAAS*VPLPRG
Trigger: CCCACGTGGAAGCGGCACTCAAGATGCTGCGCCGCG...TGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGGGGCCCGACCTCAGTaGGCTCCACGTTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSGARPQ*APRCGG
Trigger: ACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp GTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGTCCTGACTGAGTGGTaGGTGTGCTCACTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: VRYWCKGASATPRLLWPPVLTEW*VCSLGA
Trigger: AGCACCGAGTGAGCACACTCACCACTCAGTCAGGAC...AGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCACCTCCTCCCGGGCCTTaGGGTACAGGTACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPPPPGP*GTGTRG
Trigger: GCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGG...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp TCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCACCTCCTCCCGGGCCTTaGGGTACAGGTACTCGCGGC +
Preference number: 4 (lower is better)
Translates to: SLGAQEDSLACGIGVRVPPPPGP*GTGTRG
Trigger: GCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGG...TGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTAGGTCTGGGATGTCATaGCGCATGACCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: GVRVPAPLHVCCGLLLQRRSGMS*RMTTLH
Trigger: GTGCAATGTGGTCATGCGGCATGACATCCCAGACCT...ACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTACCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACA +
Preference number: 4 (lower is better)
Translates to: VWPVPSALAHWRLPLSELPPAPA*PDGSCT
Trigger: TGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGG...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCACGCTCCTTCCTCTCCTaGGCTGAGCGCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPRSFLS*AERCAS
Trigger: GGAGGCGCAGCGCTCAGCCCAGGAGAGGAAGGAGCG...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCACTCAGAGGCAGGCGGGGCCATGACACAGACGGTTTATTCAGACCTCTCCACACTCCACGTCTGCTGTaGCCTCCTGCTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PLRGRRGHDTDGLFRPLHTPRLL*PPAPAC
Trigger: GCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGT...GTGGAGAGGTCTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp GTGGTGAGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGGCAGGCTCGCACCAGTaGCCCCACTTCATGTCGACC +
Preference number: 4 (lower is better)
Translates to: VVSVLTRCSGRLSCVRYWAGSHQ*PHFMST
Trigger: GGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGC...CCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACTCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GTGGTGAGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTCAGAGACCCGCTTaGCCAGGCGGGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VVSVLTRCSGRLSCVRYWCQRPA*PGGRRS
Trigger: GCTTCTCCTCCCGCCTGGGCAAGCGGGTCTCTGACA...CCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACTCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAGTAGTCGTCCTGGTTTaGGAAGGTGATGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: VWPVPSALAHWRLPLSELVVVLV*EGDDPV
Trigger: CACCGGGTCATCACCTTCGCAAACCAGGACGACTAC...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp GACGGTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGTCTGCTGTGGCCTCCTaGTCCAGCGTGCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: DGLFRPLHPPQFHIPVQQSAVAS*SSVPRR
Trigger: CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGA...CTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTCTGCTGTGGCCTCCTaGTCCAGCGTGCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSAVAS*SSVPRR
Trigger: CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGCGCCACTCCACGTCTaGTGTGGCCTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSAPLHV*CGLLLQ
Trigger: CTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp ATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCATCATCCACGTGGCTaGTCACACCTTCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: IGVRVPAPLHVCCGLLLQHHPRG*SHLHLQ
Trigger: CTGGAGGTGAAGGTGTGACCAGCCACGTGGATGATG...CTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTAAGGTGATGACCCGGTaGCTGTCATCTTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: VRYWCKGASATPRLLWPPKVMTR*LSSLGT
Trigger: CGTGCCCAAAGATGACAGCCACCGGGTCATCACCTT...AGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCAGCTCCACGTTGCGGTaGTCTGTCTTCTTATACACA +
Preference number: 4 (lower is better)
Translates to: VRVPAPLHVCCGLLLQRASSTLR*SVFLYT
Trigger: TGTGTATAAGAAGACAGACCACCGCAACGTGGAGCT...GGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCAGCTGAGCACTGGGTGTaGCCTGTCCCCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPAEHWV*PVPSAL
Trigger: CAACGCGGAGGGGACAGGCCACACCCAGTGCTCAGC...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCAAGTGCCGCTTCCACGTaGGTCCGGGAGAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAQEDSLACGIGVRVPAPSAAST*VRENLW
Trigger: CCACAGATTCTCCCGGACCCACGTGGAAGCGGCACT...TGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp GTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTCGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLTRCSGRLSCVRYWCKGRPADR*RRWLCR
Trigger: CCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCG...ACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp GAACACCAGCTTCAGCTCCTTTGCAAACATCTTGAGGCGGGAACTGGGGTCTCGCGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EHQLQLLCKHLEAGTGVSRPADR*RRWLCR
Trigger: CCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCG...CGAGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGAGCTGAAGCTGGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR TCA 90 bp TGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGTCCAAGTCCATGTCCTaGCTGAGTGGTGAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: CGIGVRVPAPLHVCCGLLSKSMS*LSGECA
Trigger: AGCACACTCACCACTCAGTCAGGACATGGACTTGGA...CAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp AGGCTCGCACCAGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTGGGCGCCAGCTTCAGCTCCTTTaGAAACATCTTGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RLAPVPPLHVDLGSFAGRQLQLL*KHLEAG
Trigger: TCCCGCCTCAAGATGTTTGCAAAGGAGCTGAAGCTG...GCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGCAGGCTCGCACCAGTaGCCCCACTTCATGTCGACC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSAGSHQ*PHFMST
Trigger: GGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp TTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGCAAACATCTTGGCAGGCTCGCACCAGTaGCCCCACTTCATGTCGACC +
Preference number: 4 (lower is better)
Translates to: FIRWAPGNTSFSSFANILAGSHQ*PHFMST
Trigger: GGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGC...CAAGATGTTTGCAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTGTCAGAGACCCGCTTaGCCAGGCGGGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSCQRPA*PGGRRS
Trigger: GCTTCTCCTCCCGCCTGGGCAAGCGGGTCTCTGACA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGCCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMPRFIR*APGNTS
Trigger: GCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGG...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp CCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAACTTGGAGCTGTGTCCTCACATaGCAGGAGGGGCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PVPSALAHWRLPLSELTWSCVLT*QEGQKS
Trigger: GCTCTTTTGCCCCTCCTGCCATGTGAGGACACAGCT...CCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTACTGGGAAGTCCAAGATaGTGGCTCCAGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: VWPVPSALAHWRLPLSELLGSPR*WLQQIQ
Trigger: CTGAATCTGCTGGAGCCACCATCTTGGACTTCCCAG...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp CCACTCAGAGGCAGGCGGGGCCATGACACAGACGGTTTATTCAGACCTCTCCACCCTTTGCAAACATCTTaGGGCGGGAACTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLRGRRGHDTDGLFRPLHPLQTS*GGNWGL
Trigger: GAGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGG...GTGGAGAGGTCTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGCGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMRPADR*RRWLCR
Trigger: CCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCG...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMVPRCS*TTSRSV
Trigger: CACCGATCTGCTGGTCGTTCACGAGCATCGGGGCAC...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp TGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCACATGGTGCCGGAATaGTATGTAGTCGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: CGIGVRVPAPLHVCCGLLHMVPE*YVVVLV
Trigger: AACCAGGACGACTACATATCATTCCGGCACCATGTG...CAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp CTTCATGTCGACCTCGGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTGGGATCCTCGACTCCTaGCCATCGGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: LHVDLGSFAGRPGTPASAGILDS*PSVFII
Trigger: GATGATGAATACCGATGGGCAGGAGTCGAGGATCCC...AGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR GCA 90 bp TCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCATGGCCTCCGACATGGTaGCCAGGTCTGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: SGRLSCVRYWCKGASATPWPPTW*PGLGCH
Trigger: ATGACATCCCAGACCTGGGCACCATGTCGGAGGCCA...TGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGGACCAAAGGGCAGGTaGCTGACGATGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSGPKGR*LTMSPT
Trigger: TGTGGGGCTCATCGTCAGCCACCTGCCCTTTGGTCC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGCTTGGCCTCCGACATaGTGCCCAGGTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSAWPPT*CPGLGC
Trigger: ACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp GACGGTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGCCGTGTGTGATGAGGTaGGGCTTGGCCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: DGLFRPLHPPQFHIPVQQPCVMR*GLASDM
Trigger: CATGTCGGAGGCCAAGCCCCACCTCATCACACACGG...CTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCACTCCACGTCTGCTGTaGCCTCCTGCTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSTPRLL*PPAPAC
Trigger: GCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGT...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp CCACTCAGAGGCAGGCGGGGCCATGACACAGACGGTTTATTCAGACCTCTCCACAGTGAGTTAACTTGGTaGGCTGCCCCTGACACAGGC +
Preference number: 4 (lower is better)
Translates to: PLRGRRGHDTDGLFRPLHSELTW*AAPDTG
Trigger: GCCTGTGTCAGGGGCAGCCCACCAAGTTAACTCACT...GTGGAGAGGTCTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp CCACTCAGAGGCAGGCGGGGCCATGACACAGACGGTTTATTCAGACCTCTCCACAGTCCATGTCCTGACTaGGTGGTGAGTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: PLRGRRGHDTDGLFRPLHSPCPD*VVSVLT
Trigger: AGTGAGCACACTCACCACTCAGTCAGGACATGGACT...GTGGAGAGGTCTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp TCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCACCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACA +
Preference number: 4 (lower is better)
Translates to: SLGAQEDSLACGIGVRVPPPAPA*PDGSCT
Trigger: TGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGG...TGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp TCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCTCGGCGTAACTCAGTaGGAATCAGGCGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SCVRYWCKGASATPRLLWLGVTQ*ESGGFL
Trigger: AAGAAAACCGCCTGATTCCCACTGAGTTACGCCGAG...CCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp AGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGACCAAAGGGCAGGTaGCTGACGATGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SVLTRCSGRLSCVRYWCKGPKGR*LTMSPT
Trigger: TGTGGGGCTCATCGTCAGCCACCTGCCCTTTGGTCC...CTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCCCGTGTGTGATGAGGTaGGGCTTGGCCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSPCVMR*GLASDM
Trigger: CATGTCGGAGGCCAAGCCCCACCTCATCACACACGG...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp CCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAACTTGGGGTGGCTGTCATCTTTaGGCACGGGAAATAGGTATC +
Preference number: 4 (lower is better)
Translates to: PVPSALAHWRLPLSELTWGGCHL*AREIGI
Trigger: GATACCTATTTCCCGTGCCCAAAGATGACAGCCACC...CCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTCTTGCGTGCGGTATTaGTGTAAGGGTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSCVRY*CKGASA
Trigger: GGCGCTGGCACCCTTACACCAATACCGCACGCAAGA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp TGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCTTTGCAAACATCTTaGGGCGGGAACTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CSLGAQEDSLACGIGVRVPLQTS*GGNWGL
Trigger: GAGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGG...CACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR TCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCCTTTGCAAACATCTTaGGGCGGGAACTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSPLQTS*GGNWGL
Trigger: GAGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCGTCCTGACTGAGTGGTaGGTGTGCTCACTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSVLTEW*VCSLGA
Trigger: AGCACCGAGTGAGCACACTCACCACTCAGTCAGGAC...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGGTCCTGACTGAGTGGTaGGTGTGCTCACTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMVLTEW*VCSLGA
Trigger: AGCACCGAGTGAGCACACTCACCACTCAGTCAGGAC...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTGGTGGGTCTGTCTATaGCAGCCCCATCCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSWWVCL*QPHPEF
Trigger: GAACTCAGGATGGGGCTGTCATAGACAGACCCACCA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp GACGGTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGCAGCAGGCCATTCTGTaGCAGTTCCTACTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DGLFRPLHPPQFHIPVQQQQAIL*QFLLVG
Trigger: ACCCACCAGTAGGAACTGTCACAGAATGGCCTGCTG...CTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCACTCAGAGGCAGGCGGGGCCATGACACAGACGGTTTATTCAGACCTCTCCACCAGCTTCAGCTCCTTTaGAAACATCTTGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PLRGRRGHDTDGLFRPLHQLQLL*KHLEAG
Trigger: TCCCGCCTCAAGATGTTTGCAAAGGAGCTGAAGCTG...GTGGAGAGGTCTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCTCTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCTGGCCTCCGACATGGTaGCCAGGTCTGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSWPPTW*PGLGCH
Trigger: ATGACATCCCAGACCTGGGCACCATGTCGGAGGCCA...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGCCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACA +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMPPAPA*PDGSCT
Trigger: TGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGG...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCCATGGTGCCCAGGTCTaGGATGTCATGCCGCATGAC +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSHGAQV*DVMPHD
Trigger: GTCATGCGGCATGACATCCCAGACCTGGGCACCATG...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp CCTCGGGCATCTTTTATAAGAGCACTAATTCTATGCAAGAGGGCAGAGTCCTCACCTGCAGACTTGGCCTaGCCACTCAGAGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PRASFIRALILCKRAESSPADLA*PLRGRR
Trigger: CCGCCTGCCTCTGAGTGGTCAGGCCAAGTCTGCAGG...TGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCTTATAAAAGATGCCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp TCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAATCATGTACACTCAGTaGGCTCCACGTTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLGAQEDSLACGIGVRVPIMYTQ*APRCGG
Trigger: ACCACCGCAACGTGGAGCTCACTGAGTGTACATGAT...TGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCGTAGTCGTCCTGGTTTaGGAAGGTGATGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSVVVLV*EGDDPV
Trigger: CACCGGGTCATCACCTTCGCAAACCAGGACGACTAC...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp GGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCATCAGGAAGACTCTCTTaGGTGCGGTATTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: GAQEDSLACGIGVRVPAPSGRLS*VRYWCK
Trigger: CTTACACCAATACCGCACGCAAGAGAGTCTTCCTGA...TGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp TCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAAGTGTGCTCACTCGGTaGTCAGGAAGACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SLGAQEDSLACGIGVRVPSVLTR*SGRLSC
Trigger: GCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT...TGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCAGTGTGCTCACTCGGTaGTCAGGAAGACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSVLTR*SGRLSC
Trigger: GCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGCATCATCCACGTGGCTaGTCACACCTTCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMHHPRG*SHLHLQ
Trigger: CTGGAGGTGAAGGTGTGACCAGCCACGTGGATGATG...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp GGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCATATTCATCATCCACGTaGCTGGTCACACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GAQEDSLACGIGVRVPAPYSSST*LVTPSP
Trigger: AGGTGAAGGTGTGACCAGCCACGTGGATGATGAATA...TGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GGTGAGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGGGTGGCTGTCATCTTTaGGCACGGGAAATAGGTATC +
Preference number: 4 (lower is better)
Translates to: GECAHSVLRKTLLRAVLVGGCHL*AREIGI
Trigger: GATACCTATTTCCCGTGCCCAAAGATGACAGCCACC...CACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGAAGGTGATGACCCGGTaGCTGTCATCTTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMKVMTR*LSSLGT
Trigger: CGTGCCCAAAGATGACAGCCACCGGGTCATCACCTT...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTTTGCCCTGCAGACTTaGCCTGACCACTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMFALQT*PDHSEA
Trigger: TGCCTCTGAGTGGTCAGGCCAAGTCTGCAGGGCAAA...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCTCAGTGAGTTAACTTaGTGGGCTGCCCCTGACACA +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSLSELT*WAAPDT
Trigger: TGTGTCAGGGGCAGCCCACCAAGTTAACTCACTGAG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGAACAGGAGAACCCAATaGGCAAGGAAAACGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMNRRTQ*ARKTAG
Trigger: GCCGGCCGTTTTCCTTGCCCATTGGGTTCTCCTGTT...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452955.1
CDS-3UTR TCA 90 bp CCTCGGGCATCTTTTATAAGAGCACTAATTCTATGCAAGAGGGCAGAGTCCTCACGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRASFIRALILCKRAESSRPADR*RRWLCR
Trigger: CCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCG...TGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCTTATAAAAGATGCCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCACATGGTGCCGGAATaGTATGTAGTCGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSHMVPE*YVVVLV
Trigger: AACCAGGACGACTACATATCATTCCGGCACCATGTG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACGGGGCCCGACCTCAGTaGGCTCCACGTTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNGARPQ*APRCGG
Trigger: ACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCC...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGAGTCCATGTCCTGACTaGGTGGTGAGTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMSPCPD*VVSVLT
Trigger: AGTGAGCACACTCACCACTCAGTCAGGACATGGACT...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCAAGTCCATGTCCTaGCTGAGTGGTGAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMSKSMS*LSGECA
Trigger: AGCACACTCACCACTCAGTCAGGACATGGACTTGGA...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGACAGCCCCATCCTaGGTTCCAAGTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSMTAPS*VPSPCP
Trigger: AGGACATGGACTTGGAACTCAGGATGGGGCTGTCAT...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGGGGATCCTCGACTCCTaGCCATCGGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMGILDS*PSVFII
Trigger: GATGATGAATACCGATGGGCAGGAGTCGAGGATCCC...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCAGCTTCAGCTCCTTTaGAAACATCTTGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSQLQLL*KHLEAG
Trigger: TCCCGCCTCAAGATGTTTGCAAAGGAGCTGAAGCTG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGAGGTCTGGGATGTCATaGCGCATGACCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMRSGMS*RMTTLH
Trigger: GTGCAATGTGGTCATGCGGCATGACATCCCAGACCT...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp TCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGAAGACTCTCTTGCGTaGGGTATTGGTGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLGAQEDSLACGIGVRVPEDSLA*GIGVRV
Trigger: CACCCTTACACCAATACCGCACGCAAGAGAGTCTTC...TGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGGTGGCTGTCATCTTTaGGCACGGGAAATAGGTATC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSGGCHL*AREIGI
Trigger: GATACCTATTTCCCGTGCCCAAAGATGACAGCCACC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp CCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAACTTGGATGTTGGCAACAATGTaGAGAAAAGGGAACCCTAGT +
Preference number: 4 (lower is better)
Translates to: PVPSALAHWRLPLSELTWMLATM*RKGNPS
Trigger: ACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACAT...CCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCTCGGCGTAACTCAGTaGGAATCAGGCGGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSLGVTQ*ESGGFH
Trigger: ATGAAAACCGCCTGATTCCCACTGAGTTACGCCGAG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452955.1
CDS-3UTR TCA 90 bp ACACAAGATAAAGAATGTTGGCAACAATGTGGAGAAAAGGGAACCCTAGTGAACCGCGGCGCAGCATCTTaGGTGCCGCTTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: TQDKECWQQCGEKGTLVNRGAAS*VPLPRG
Trigger: CCCACGTGGAAGCGGCACTCAAGATGCTGCGCCGCG...GTTCACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACATTCTTTATCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCCACATGGTGCCGGAATaGTATGTAGTCGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSHMVPE*YVVVLV
Trigger: AACCAGGACGACTACATATCATTCCGGCACCATGTG...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR TCA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAAAAACAAATACCACATaGTGCCACTTACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: VWPVPSALAHWRLPLSELKTNTT*CHLHEE
Trigger: TTCCTCATGTAAGTGGCATCATGTGGTATTTGTTTT...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp AGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGCAGCTTCAGCTCCTTTaGAAACATCTTGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SVLTRCSGRLSCVRYWCKQLQLL*KHLEAG
Trigger: TCCCGCCTCAAGATGTTTGCAAAGGAGCTGAAGCTG...CTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR GCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCGAAGACTCTCTTGCGTaGGGTATTGGTGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSEDSLA*GIGVRV
Trigger: CACCCTTACACCAATACCGCACGCAAGAGAGTCTTC...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCATCAGGAAGACTCTCTTaGGTGCGGTATTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPSGRLS*VRYWCK
Trigger: CTTACACCAATACCGCACGCAAGAGAGTCTTCCTGA...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTCAGGAAGACTCTCTTaGGTGCGGTATTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSGRLS*VRYWCK
Trigger: CTTACACCAATACCGCACGCAAGAGAGTCTTCCTGA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR GCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCCCTGCTACCCACATCTaGCTGCTGAAGAGCTCATAT +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSPATHI*LLKSSY
Trigger: ATATGAGCTCTTCAGCAGGCAGATGTGGGTAGCAGG...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCAGCTCCACGTTGCGGTaGTCTGTCTTCTTATACACA +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSSTLR*SVFLYT
Trigger: TGTGTATAAGAAGACAGACCACCGCAACGTGGAGCT...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTACAATATACGAATTTTTaGGGGACACAAACATTCAGG +
Preference number: 4 (lower is better)
Translates to: VWPVPSALAHWRLPLSELQYTNF*GTQTFR
Trigger: CCTGAATGTTTGTGTCCCCCAAAAATTCGTATATTG...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CTTTGCAGGCTCGCACCAGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTTATTCATCATCCACGTaGCTGGTCACACCTTGTATA +
Preference number: 4 (lower is better)
Translates to: LCRLAPVPPLHVDLGSFAYSSST*LVTPCI
Trigger: TATACAAGGTGTGACCAGCCACGTGGATGATGAATA...AGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR TCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTATGACCCTCACTCTTaGGGGGACGTTAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMYDPHS*GDVSIK
Trigger: TTTGATGCTAACGTCCCCTCAAGAGTGAGGGTCATA...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACGCGCAGCATCTTGAGTaGCGCTTCCACGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNAQHLE*RFHVGP
Trigger: CGGACCCACGTGGAAGCGGCACTCAAGATGCTGCGC...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTATTCATCATCCACGTaGCTGGTCACACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMYSSST*LVTPSP
Trigger: AGGTGAAGGTGTGACCAGCCACGTGGATGATGAATA...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACGGACCAAAGGGCAGGTaGCTGACGATGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNGPKGR*LTMSPT
Trigger: TGTGGGGCTCATCGTCAGCCACCTGCCCTTTGGTCC...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACGCTTGGCCTCCGACATaGTGCCCAGGTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNAWPPT*CPGLGC
Trigger: ACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGC...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CTTGAGGAGCTTCTCAATGGCTATATCTACAGAGTGGGAAAAACTATTTGCAAAGCAGGCTCGCACCAGTaGCCCCACTTCATGTCGACC +
Preference number: 4 (lower is better)
Translates to: LEELLNGYIYRVGKTICKAGSHQ*PHFMST
Trigger: GGTCGACATGAAGTGGGGGCACTGGTGCGAGCCTGC...TTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGAAGCTCCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACCATCATCCACGTGGCTaGTCACACCTTCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNHHPRG*SHLHLQ
Trigger: CTGGAGGTGAAGGTGTGACCAGCCACGTGGATGATG...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATGCCCCTGACACAGGCTaGCCCTGCTACCCACATCTG +
Preference number: 4 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNAPDTG*PCYPHL
Trigger: CAGATGTGGGTAGCAGGGCCAGCCTGTGTCAGGGGC...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCTTAGTACAGCCTTTATaGAAAACAGTATGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSLVQPL*KTVWRF
Trigger: GAACCGCCATACTGTTTTCCATAAAGGCTGTACTAA...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCTATCTGTCTCAACTTaGGCTGTTCTAACAAAATAC +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSLSVST*AVLTKY
Trigger: GTATTTTGTTAGAACAGCCCAAGTTGAGACAGATAG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp CTTGAGGAGCTTCTCAATGGCTATATCTACAGAGTGGGAAAAACTATTTGCAAAAGGCAGGCGGGGCCATaGCACAGACGGTTTATTCAG +
Preference number: 4 (lower is better)
Translates to: LEELLNGYIYRVGKTICKRQAGP*HRRFIQ
Trigger: CTGAATAAACCGTCTGTGTCATGGCCCCGCCTGCCT...TTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGAAGCTCCTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACGGGATCCTCGACTCCTaGCCATCGGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNGILDS*PSVFII
Trigger: GATGATGAATACCGATGGGCAGGAGTCGAGGATCCC...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAATGTCAGAGACCCGCTTaGCCAGGCGGGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQCQRPA*PGGRRS
Trigger: GCTTCTCCTCCCGCCTGGGCAAGCGGGTCTCTGACA...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATGACACAGGCTGGCCCTaGTACCCACATCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNDTGWP*YPHLPA
Trigger: AGCAGGCAGATGTGGGTAGCAGGGCCAGCCTGTGTC...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCAGAAATCCTATCATTTaGAATAACATGGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSRNPII*NNMEEP
Trigger: AGGTTCCTCCATGTTATTGCAAATGATAGGATTTCT...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATTCCGCGTTGGCACACTaGCGGCTTCCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNSALAH*RLPLSE
Trigger: CTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGA...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCAGCTATATCTACAGAGTaGGAAAAACTATTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPAISTE*EKLFAN
Trigger: GTTTGCAAATAGTTTTTCCCACTCTGTAGATATAGC...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp AACAAAGAACAAATGACCCGGTGTATGCAAAAATGCTCAGTATCACCAACCGTTGCTGAAGAGCTCATATaGCCCTCACTCTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: NKEQMTRCMQKCSVSPTVAEELI*PSLLRG
Trigger: TCCCCTCAAGAGTGAGGGTCATATGAGCTCTTCAGC...AACGGTTGGTGATACTGAGCATTTTTGCATACACCGGGTCATTTGTTCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp AGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATGGCGGTTCCTCAAAAAGCGGCTTCCACTCAGTaGGTTAACTTGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RMEISTAFMENSMAVPQKAASTQ*VNLVGC
Trigger: GCAGCCCACCAAGTTAACTCACTGAGTGGAAGCCGC...TTTTTGAGGAACCGCCATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CCTCGGGCATCTTTTATAAGAGCACTAATTCTATGCAAGAGGGCAGAGTCCTCAAGAGCACTAATTCTATaGAAGAGGGCAGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRASFIRALILCKRAESSRALIL*KRAESS
Trigger: TGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCT...TGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCTTATAAAAGATGCCCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp AGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATGGCGGTTCCTCAAAAATCTTGCGTGCGGTATTaGTGTAAGGGTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RMEISTAFMENSMAVPQKSCVRY*CKGASA
Trigger: GGCGCTGGCACCCTTACACCAATACCGCACGCAAGA...TTTTTGAGGAACCGCCATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp ACACAAGATAAAGAATGTTGGCAACAATGTGGAGAAAAGGGAACCCTAGTGAACGAAGACTCTCTTGCGTaGGGTATTGGTGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TQDKECWQQCGEKGTLVNEDSLA*GIGVRV
Trigger: CACCCTTACACCAATACCGCACGCAAGAGAGTCTTC...GTTCACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACATTCTTTATCTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp CTTGAGGAGCTTCTCAATGGCTATATCTACAGAGTGGGAAAAACTATTTGCAAAAGTGTGCTCACTCGGTaGTCAGGAAGACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LEELLNGYIYRVGKTICKSVLTR*SGRLSC
Trigger: GCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT...TTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGAAGCTCCTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp ATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTGAGAATGGAAATTAGTACACTCGGCGTAACTCAGTaGGAATCAGGCGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MWRKGNPSELLVRMEISTLGVTQ*ESGGFL
Trigger: AAGAAAACCGCCTGATTCCCACTGAGTTACGCCGAG...TGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAACATGGTGCCCAGGTCTaGGATGTCATGCCGCATGAC +
Preference number: 4 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQHGAQV*DVMPHD
Trigger: GTCATGCGGCATGACATCCCAGACCTGGGCACCATG...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATCCCAAAGGGATCCCATaGGCTTTGCCCTGCAGACTT +
Preference number: 4 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNPKGIP*ALPCRL
Trigger: AAGTCTGCAGGGCAAAGCCCATGGGATCCCTTTGGG...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAACACAGCTCTGGAGGCTaGGAAGTCCAAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQHSSGG*EVQDGG
Trigger: GCCACCATCTTGGACTTCCCAGCCTCCAGAGCTGTG...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR TCA 90 bp AGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATGGCGGTTCCTCAAAAAATGACAGCCCCATCCTaGGTTCCAAGTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RMEISTAFMENSMAVPQKMTAPS*VPSPCP
Trigger: AGGACATGGACTTGGAACTCAGGATGGGGCTGTCAT...TTTTTGAGGAACCGCCATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp AGAATGGAAATTAGTACAGCCTTTATGGAAAACAGTATGGCGGTTCCTCAAAAAAGGTCTGGGATGTCATaGCGCATGACCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: RMEISTAFMENSMAVPQKRSGMS*RMTTLH
Trigger: GTGCAATGTGGTCATGCGGCATGACATCCCAGACCT...TTTTTGAGGAACCGCCATACTGTTTTCCATAAAGGCTGTACTAATTTCCATTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp ACACAAGATAAAGAATGTTGGCAACAATGTGGAGAAAAGGGAACCCTAGTGAACTACTCCCATGTTTACTaGAGCATTTCCACAACTGCC +
Preference number: 4 (lower is better)
Translates to: TQDKECWQQCGEKGTLVNYSHVY*SISTTA
Trigger: GGCAGTTGTGGAAATGCTGCAGTAAACATGGGAGTA...GTTCACTAGGGTTCCCTTTTCTCCACATTGTTGCCAACATTCTTTATCTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CAA 72 bp GCAACAATGTGGAGAAAAGGGAACCCTAGTGAACTGTaGGTGAGAATGGAAATTAGTACAGCCTTTATGGAA +
Preference number: 4 (lower is better)
Translates to: ATMWRKGNPSEL*VRMEISTAFME
Trigger: TTCCATAAAGGCTGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACATTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR GCA 90 bp ATGTGGAGAAAAGGGAACCCTAGTGAACTGTTGGTGAGAATGGAAATTAGTACACAGCATTTCCACAACTaGCAAACTATGAAAACGACC +
Preference number: 4 (lower is better)
Translates to: MWRKGNPSELLVRMEISTQHFHN*QTMKTT
Trigger: GGTCGTTTTCATAGTTTGGCAGTTGTGGAAATGCTG...TGTACTAATTTCCATTCTCACCAACAGTTCACTAGGGTTCCCTTTTCTCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATTATTCATCATCCACGTaGCTGGTCACACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNYSSST*LVTPSP
Trigger: AGGTGAAGGTGTGACCAGCCACGTGGATGATGAATA...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CCA 90 bp CCACAGCAGTATCCAAACTATATAAGGGACTCAAGTCAACAACAAAGAACAAATAGCTCCACGTTGCGGTaGTCTGTCTTCTTATACACA +
Preference number: 4 (lower is better)
Translates to: PQQYPNYIRDSSQQQRTNSSTLR*SVFLYT
Trigger: TGTGTATAAGAAGACAGACCACCGCAACGTGGAGCT...ATTTGTTCTTTGTTGTTGACTTGAGTCCCTTATATAGTTTGGATACTGCTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
3UTR CAA 72 bp TCTCAATGGCTATATCTACAGAGTGGGAAAAACTATTaGCAAACCATGTATCTGGTAAAGGGTTACTATCTG +
Preference number: 4 (lower is better)
Translates to: SQWLYLQSGKNY*QTMYLVKGYYL
Trigger: CAGATAGTAACCCTTTACCAGATACATGGTTTGCAAATAGTTTTTCCCACTCTGTAGATATAGCCATTGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS GCA 90 bp GCTCCTTCCTCTCCTGGGCTGAGCGCTGCGCCTCCTCCCGGGCCTTaGGGTACAGGTACTCGCGGCGCAGGCGGGCCTCGCGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: APSSPGLSAAPPPGP*GTGTRGAGGPRGAA
Trigger: TGCTGCGCCGCGAGGCCCGCCTGCGCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGCGCAGCGCTCAGCCCAGGAGAGGAAGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259239.8
ENST00000409935.5
ENST00000456713.1
ENST00000464432.5
ENST00000473689.5
CDS GCA 90 bp GCTCCTTCCTCTCCTGGGCTGAGCGCTGCGCCTCCTCCCGGGCCTTaGGGTACAGGTACTCGCGGCGCAGGCGGGCCTCGCGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: APSSPGLSAAPPPGP*GTGTRGAGGPRGAA
Trigger: AGCTGCGCCGCGAGGCCCGCCTGCGCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGCGCAGCGCTCAGCCCAGGAGAGGAAGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409649.5
ENST00000428740.5
ENST00000460766.5
ENST00000462392.5
ENST00000470672.1
ENST00000477375.5
ENST00000490895.5
ENST00000495606.5
CDS-3UTR CAA 90 bp GGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGAAGATCGGTGACGCCGTaGGCTTTGCAGGCTCGCACC +
Preference number: 5 (lower is better)
Translates to: GCQRHSTSAVASCSSVPRRSVTP*ALQART
Trigger: GGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCT...TCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS TCA 90 bp CCCGACTCCCTCCCTCCGGCCTTACCAGGTGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTGACGCCGTTGGCTTTGCAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: PDSLPPALPGVPRCS*TTSRSVTPLALQAR
Trigger: GCGAGCCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTAAGGCCGGAGGGAGGGAGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473689.5
ENST00000477375.5
CDS-3UTR CAA 90 bp GGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGTGACGCCGTTGGCTTaGCAGGCTCGCACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GVRVPAPLHVCCGLLLQRVTPLA*QARTSA
Trigger: GGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCAC...ACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS GCA 90 bp GGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACAGCTTCAGCTCAAAGCGGGGCCCGA +
Preference number: 5 (lower is better)
Translates to: GASATPRLLWPPAPA*PDGSCTASAQSGAR
Trigger: TCGGGCCCCGCTTTGAGCTGAAGCTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259239.8
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000475074.1
CDS-3UTR CAA 90 bp GCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCGTGATGAGGTGGGGCTaGGCCTCCGACATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ACGIGVRVPAPLHVCCGLVMRWG*ASDMVP
Trigger: GGGCACCATGTCGGAGGCCAAGCCCCACCTCATCAC...GAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS GCA 90 bp GGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACACTCAGTGAGCTCCACGTTGCGGTG +
Preference number: 5 (lower is better)
Translates to: GASATPRLLWPPAPA*PDGSCTLSELHVAV
Trigger: CACCGCAACGTGGAGCTCACTGAGTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409935.5
ENST00000460100.1
CDS CCA 90 bp CCTCGGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTaGGCGTGGATGGCAGTGTACAGTCAGGACTGGGGCTGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: PRFIRWAPGNTSFSS*AWMAVYSQDWGCVS
Trigger: GGACACACAGCCCCAGTCCTGACTGTACACTGCCATCCACGCCCAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464432.5
ENST00000490895.5
CDS-3UTR CAA 90 bp TCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGTCGCGGCGCAGCATCTaGAGTGCCGCTTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: SCVRYWCKGASATPRLLWSRRSI*SAASTW
Trigger: CCACGTGGAAGCGGCACTCAAGATGCTGCGCCGCGA...CCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CAA 90 bp GGTGAGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGGCCTCCTCCCGGGCCTaGCGGTACAGGTACTCGCGG +
Preference number: 5 (lower is better)
Translates to: GECAHSVLRKTLLRAVLVASSRA*RYRYSR
Trigger: CCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGC...CACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CAA 90 bp TTCATGTCGACCTCGGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCGTGACGCCGTTGGCTTaGCAGGCTCGCACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: FMSTSVHSLGAREHQLQLVTPLA*QARTSA
Trigger: GGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCAC...GAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CAA 90 bp CCCCACTTCATGTCGACCTCGGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTAGATCGGTGACGCCGTaGGCTTTGCAGGCTCGCACC +
Preference number: 5 (lower is better)
Translates to: PHFMSTSVHSLGAREHQLRSVTP*ALQART
Trigger: GGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCT...AAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CAA 90 bp TGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGCGGTGGCTGTCATCTTaGGGCACGGGAAATAGGTAT +
Preference number: 5 (lower is better)
Translates to: CQRHSTSAVASCSSVPRRRWLSS*GTGNRY
Trigger: ATACCTATTTCCCGTGCCCAAAGATGACAGCCACCG...CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CAA 90 bp TGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: CQRHSTSAVASCSSVPRRSVSST*RWSVFL
Trigger: TAAGAAGACAGACCACCGCAACGTGGAGCTCACTGA...CCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS TCA 90 bp AGAGACCAGGTGTGCCCCGATGCTCGTGAACGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGGCTCGCACCAGTGCCCCCACTTCAT +
Preference number: 5 (lower is better)
Translates to: RDQVCPDARERPADR*RRWLCRLAPVPPLH
Trigger: ATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462392.5
CDS TCA 90 bp CCTTACCAGGTGTGCCCCGATGCTCGTGAACGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGGCTCGCACCAGTGCCCCCACTTCAT +
Preference number: 5 (lower is better)
Translates to: PYQVCPDARERPADR*RRWLCRLAPVPPLH
Trigger: ATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473689.5
ENST00000477375.5
CDS GCA 90 bp CTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTaGTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGATCATGTACAG +
Preference number: 5 (lower is better)
Translates to: LACGIGVRVPAPLHV*CGLLLQRAQTDHVQ
Trigger: CTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259239.8
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000475074.1
CDS GCA 90 bp CTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTaGTGTGGCCTCCTGCTCCAGCGTGCCCAGACGGATCATGTACAC +
Preference number: 5 (lower is better)
Translates to: LACGIGVRVPAPLHV*CGLLLQRAQTDHVH
Trigger: GTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCACGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409935.5
ENST00000460100.1
CDS-3UTR CAA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGCCTCCTCCCGGGCCTaGCGGTACAGGTACTCGCGG +
Preference number: 5 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSASSRA*RYRYSR
Trigger: CCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp CCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTAACTTGGATGTCAGAGACCCGCTaGCCCAGGCGGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVPSALAHWRLPLSELTWMSETR*PRREEK
Trigger: CTTCTCCTCCCGCCTGGGCAAGCGGGTCTCTGACAT...CCAAGTTAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS TCA 90 bp GGGTGGGGATGCTTTCCTGGGGCATGGCCCGTGGACCCACCGGAATaGTATGTAGTCGTCCTGGTTTGCGAAGGTGATGACCCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GWGCFPGAWPVDPPE*YVVVLVCEGDDPVA
Trigger: AGCCACCGGGTCATCACCTTCGCAAACCAGGACGACTACATATCATTCCGGTGGGTCCACGGGCCATGCCCCAGGAAAGCATCCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CCA 90 bp GTGCGGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTaGCCTCCTGCTCCAGCGTGCCCAGACGGATCATGTACACTCAGT +
Preference number: 5 (lower is better)
Translates to: VRYWCKGASATPRLL*PPAPACPDGSCTLS
Trigger: ACTGAGTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409935.5
ENST00000460100.1
CDS-3UTR CAA 90 bp TCGGGAGGTAGTGATCATAACCTTGGGATCCTCGACTCCTGCCCATCGGTATTCGCCTCCTCCCGGGCCTaGCGGTACAGGTACTCGCGG +
Preference number: 5 (lower is better)
Translates to: SGGSDHNLGILDSCPSVFASSRA*RYRYSR
Trigger: CCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGC...GAATACCGATGGGCAGGAGTCGAGGATCCCAAGGTTATGATCACTACCTCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CAA 90 bp GGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGGTGCCAGCGCCAATGTCAGAGACCCGCTaGCCCAGGCGGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GAQEDSLACGIGVRVPAPMSETR*PRREEK
Trigger: CTTCTCCTCCCGCCTGGGCAAGCGGGTCTCTGACAT...TGGCGCTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS CCA 90 bp GTGTGTGATGAGGTGGGGCTTGGCCTCCGACATGGTGCCCAGGTCTaGGATGTCATGCCGCATGACCACATTGCACAGCGTGAAGTAGGC +
Preference number: 5 (lower is better)
Translates to: VCDEVGLGLRHGAQV*DVMPHDHIAQREVG
Trigger: GCCTACTTCACGCTGTGCAATGTGGTCATGCGGCATGACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGCCCCACCTCATCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462357.1
ENST00000464432.5
ENST00000473689.5
ENST00000490895.5
CDS CCA 90 bp GTCAACGGCAAGCAGCACGAGGTACACAGGGTGGGGATGCTTTCCTaGGGCATGGCCCGTGGACCCACCGGAATGATATGTAGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: VNGKQHEVHRVGMLS*GMARGPTGMICSRP
Trigger: AGGACGACTACATATCATTCCGGTGGGTCCACGGGCCATGCCCCAGGAAAGCATCCCCACCCTGTGTACCTCGTGCTGCTTGCCGTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS-3UTR CAA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCAGTGACGCCGTTGGCTTaGCAGGCTCGCACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPVTPLA*QARTSA
Trigger: GGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCAC...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCGTGATGAGGTGGGGCTaGGCCTCCGACATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSVMRWG*ASDMVP
Trigger: GGGCACCATGTCGGAGGCCAAGCCCCACCTCATCAC...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp GTGTGGCCTGTCCCCTCCGCGTTGGCACACTGGCGGCTTCCACTCAGTGAGTTATCCTTTGCAAACATCTaGAGGCGGGAACTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: VWPVPSALAHWRLPLSELSFANI*RRELGS
Trigger: AGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGA...TAACTCACTGAGTGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp GGTATTGGTGTAAGGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTGCTCTCCTTTGCAAACATCTaGAGGCGGGAACTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GIGVRVPAPLHVCCGLLLSFANI*RRELGS
Trigger: AGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGA...GAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCCTTACACCAATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CAA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCGTGACGCCGTTGGCTTaGCAGGCTCGCACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSVTPLA*QARTSA
Trigger: GGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCAC...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCAAGATCGGTGACGCCGTaGGCTTTGCAGGCTCGCACC +
Preference number: 5 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPRSVTP*ALQART
Trigger: GGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCT...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCGTGATGAGGTGGGGCTaGGCCTCCGACATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSVMRWG*ASDMVP
Trigger: GGGCACCATGTCGGAGGCCAAGCCCCACCTCATCAC...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS TCA 90 bp CAGCCTCAAACTCACGCTTCAGCTCAAAGCGGGGCCCGACCTCAGTaGGCTCCACGTTGCGGTGGTCTGTCTTCTTATACACATGGTGCC +
Preference number: 5 (lower is better)
Translates to: QPQTHASAQSGARPQ*APRCGGLSSYTHGA
Trigger: GGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTTTGAGCTGAAGCGTGAGTTTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462357.1
CDS GCA 90 bp TCAGTGAGCTCCACGTTGCGGTGGTCTGTCTTCTTATACACATGGTaGCTGGGAGGGAACAGCTGTGGGTCAACGGCAAGCAGCACGAGG +
Preference number: 5 (lower is better)
Translates to: SVSSTLRWSVFLYTW*LGGNSCGSTASSTR
Trigger: CCTCGTGCTGCTTGCCGTTGACCCACAGCTGTTCCCTCCCAGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS-3UTR CAA 90 bp GACCTCGGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGCAATCCTTTGCAAACATCTaGAGGCGGGAACTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DLGSFAGRPGTPASAPLQSFANI*RRELGS
Trigger: AGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGA...TTGCAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CAA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGAGATCGGTGACGCCGTaGGCTTTGCAGGCTCGCACC +
Preference number: 5 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMRSVTP*ALQART
Trigger: GGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCT...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCAGAGACCCGCTaGCCCAGGCGGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSMSETR*PRREEK
Trigger: CTTCTCCTCCCGCCTGGGCAAGCGGGTCTCTGACAT...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGGGGATCCCATGGGCTTaGCCCTGCAGACTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMGIPWA*PCRLGL
Trigger: CAGGCCAAGTCTGCAGGGCAAAGCCCATGGGATCCC...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS TCA 90 bp GACGGATCATGTACAGCTTCAGCTCAAAGCGGGGCCCGACCTCAGTaGGCTCCACGTTGCGGTGGTCTGTCTTCTTATACACATGGTGCC +
Preference number: 5 (lower is better)
Translates to: DGSCTASAQSGARPQ*APRCGGLSSYTHGA
Trigger: GGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTTTGAGCTGAAGCTGTACATGATCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259239.8
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000475074.1
CDS GCA 90 bp GGGGTCTCGGGAGGTAGTGATCATAACCTTGGGATCCTCGACTCCTaGCCATCGGTATTCATCATCCACGTGGCTGGTCACACCTTCACC +
Preference number: 5 (lower is better)
Translates to: GVSGGSDHNLGILDS*PSVFIIHVAGHTFT
Trigger: GGTGAAGGTGTGACCAGCCACGTGGATGATGAATACCGATGGGCAGGAGTCGAGGATCCCAAGGTTATGATCACTACCTCCCGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000477375.5
ENST00000490895.5
CDS CCA 90 bp CAGTTTCCTCTGATGGGATGGTGCCCGGTGTGTCTGAGGAAGGACTaGAGACCTGCCAGCTCAGTGTTGGGGAGGGCTACCTTGTATAGT +
Preference number: 5 (lower is better)
Translates to: QFPLMGWCPVCLRKD*RPASSVLGRATLYS
Trigger: ACTATACAAGGTAGCCCTCCCCAACACTGAGCTGGCAGGTCTCCAGTCCTTCCTCAGACACACCGGGCACCATCCCATCAGAGGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS TCA 90 bp GGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTaGCTGAGTGGTGAGTGTGCTCACTCGGTGCTCAGGAAGACTCTC +
Preference number: 5 (lower is better)
Translates to: GSVYDSPILSSKSMS*LSGECAHSVLRKTL
Trigger: GAGAGTCTTCCTGAGCACCGAGTGAGCACACTCACCACTCAGTCAGGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259239.8
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462392.5
ENST00000475074.1
CDS-3UTR CAA 90 bp TTGAGGCGGGAACTGGGGTCTCGGGAGGTAGTGATCATAACCTTGGGATCCTCGGTAGTGATCATAACCTaGGGATCCTCGACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LRRELGSREVVIITLGSSVVIIT*GSSTPA
Trigger: GGCAGGAGTCGAGGATCCCAAGGTTATGATCACTAC...CGAGGATCCCAAGGTTATGATCACTACCTCCCGAGACCCCAGTTCCCGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS GCA 90 bp GGGGTCTCGGGAGGTAGTGATCATAACCTTGGGATCCTCGACTCCTaGCCATCGGTATTCATCATCCACGTGGCTGGTCACACCTTGTAT +
Preference number: 5 (lower is better)
Translates to: GVSGGSDHNLGILDS*PSVFIIHVAGHTLY
Trigger: ATACAAGGTGTGACCAGCCACGTGGATGATGAATACCGATGGGCAGGAGTCGAGGATCCCAAGGTTATGATCACTACCTCCCGAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428740.5
ENST00000456713.1
CDS-3UTR CAA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCCGGTGGCTGTCATCTTaGGGCACGGGAAATAGGTAT +
Preference number: 5 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSRWLSS*GTGNRY
Trigger: ATACCTATTTCCCGTGCCCAAAGATGACAGCCACCG...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp GTTTATTCAGACCTCTCCACCCGCCACAGTTCCACATCCCAGTTCAGCAGGCCATCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: VYSDLSTRHSSTSQFSRPSVSST*RWSVFL
Trigger: TAAGAAGACAGACCACCGCAACGTGGAGCTCACTGA...TGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCTGAATAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp CCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: PTGGSVYDSPILSSKSMSSVSST*RWSVFL
Trigger: TAAGAAGACAGACCACCGCAACGTGGAGCTCACTGA...GGACATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp GGTTCATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTTTGCAAACATCTGTGGCTGGTCACACCTaGTATAGTTACCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: GSFAGRPGTPASAPLQTSVAGHT*YSYLHL
Trigger: GAGGTGAAGGTAACTATACAAGGTGTGACCAGCCAC...AGATGTTTGCAAAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456713.1
CDS-3UTR CAA 90 bp ACAGTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCGTAGTGATCATAACCTaGGGATCCTCGACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: TVPTGGSVYDSPILSSKSVVIIT*GSSTPA
Trigger: GGCAGGAGTCGAGGATCCCAAGGTTATGATCACTAC...GGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp AGTGTGCTCACTCGGTGCTCAGGAAGACTCTCTTGCGTGCGGTATTGGTGTAAGGTAGTGATCATAACCTaGGGATCCTCGACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SVLTRCSGRLSCVRYWCKVVIIT*GSSTPA
Trigger: GGCAGGAGTCGAGGATCCCAAGGTTATGATCACTAC...CTTACACCAATACCGCACGCAAGAGAGTCTTCCTGAGCACCGAGTGAGCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS-3UTR CAA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGGTAGTGATCATAACCTaGGGATCCTCGACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMVVIIT*GSSTPA
Trigger: GGCAGGAGTCGAGGATCCCAAGGTTATGATCACTAC...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp GTTCCTACTGGTGGGTCTGTCTATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTTTGCAAACATCTaGAGGCGGGAACTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: VPTGGSVYDSPILSSKSMSFANI*RRELGS
Trigger: AGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGA...CATGGACTTGGAACTCAGGATGGGGCTGTCATAGACAGACCCACCAGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259239.8
ENST00000452955.1
CDS-3UTR CAA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACTCGCGGCGCAGCATCTaGAGTGCCGCTTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNSRRSI*SAASTW
Trigger: CCACGTGGAAGCGGCACTCAAGATGCTGCGCCGCGA...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAACCTGTCCCCTCCGCGTaGGCACACTGGCGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQPVPSA*AHWRLP
Trigger: TGGAAGCCGCCAGTGTGCCAACGCGGAGGGGACAGG...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp CCTCGGGCATCTTTTATAAGAGCACTAATTCTATGCAAGAGGGCAGAGTCCTCAAACCCTAGTGAACTGTaGGTGAGAATGGAAATTAGT +
Preference number: 5 (lower is better)
Translates to: PRASFIRALILCKRAESSNPSEL*VRMEIS
Trigger: ACTAATTTCCATTCTCACCAACAGTTCACTAGGGTT...TGAGGACTCTGCCCTCTTGCATAGAATTAGTGCTCTTATAAAAGATGCCCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp TCTGTCTCAACTTGGGCTGTTCTAACAAAATACCACAGACTGGGTAGCTTAAACAGTGGGAAAAACTATTaGCAAACCATGTATCTGGTA +
Preference number: 5 (lower is better)
Translates to: SVSTWAVLTKYHRLGSLNSGKNY*QTMYLV
Trigger: TACCAGATACATGGTTTGCAAATAGTTTTTCCCACT...GTTTAAGCTACCCAGTCTGTGGTATTTTGTTAGAACAGCCCAAGTTGAGACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS-3UTR CAA 90 bp TCATTATCTTCAAAAGATAGCTATACTCCCATGTTTACTGCAGCATTTCCACAAACTATCTGTCTCAACTaGGGCTGTTCTAACAAAATA +
Preference number: 5 (lower is better)
Translates to: SLSSKDSYTPMFTAAFPQTICLN*GCSNKI
Trigger: TATTTTGTTAGAACAGCCCAAGTTGAGACAGATAGT...TTGTGGAAATGCTGCAGTAAACATGGGAGTATAGCTATCTTTTGAAGATAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259239.8
CDS CAA 90 bp CGCTCCTTCCTCTCCTGGGCTGAGCGCTGCGCCTCCTCCCGGGCCTaGCGGTACAGGTACTCGCGGCGCAGGCGGGCCTCGCGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RSFLSWAERCASSRA*RYRYSRRRRASRRS
Trigger: GCTGCGCCGCGAGGCCCGCCTGCGCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGCGCAGCGCTCAGCCCAGGAGAGGAAGGAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000456713.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000470672.1
ENST00000473689.5
ENST00000477375.5
ENST00000490895.5
ENST00000495606.5
CDS CAA 90 bp CGCTTGCCCAGGCGGGAGGAGAAGCCGTGTGTGATGAGGTGGGGCTaGGCCTCCGACATGGTGCCCAGGTCTGGGATGTCATGCCGCATG +
Preference number: 6 (lower is better)
Translates to: RLPRREEKPCVMRWG*ASDMVPRSGMSCRM
Trigger: CATGCGGCATGACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGCCCCACCTCATCACACACGGCTTCTCCTCCCGCCTGGGCAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462357.1
ENST00000464432.5
ENST00000473689.5
ENST00000490895.5
CDS TCA 72 bp GTGTGCCCCGATGCTCGTGAACGACCAGCAGATCGGTaGCGCCGTTGGCTTTGCAGGCTCGCACCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: VCPDARERPADR*RRWLCRLAPVP
Trigger: GGGCACTGGTGCGAGCCTGCAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000477375.5
ENST00000490895.5
CDS GCA 72 bp GGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTaGTCCAGCGTGCCCAGACGGATCATGTACAGCTTC +
Preference number: 6 (lower is better)
Translates to: GCQRHSTSAVAS*SSVPRRIMYSF
Trigger: GAAGCTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259239.8
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000475074.1
CDS GCA 72 bp GGGTGCCAGCGCCACTCCACGTCTGCTGTGGCCTCCTaGTCCAGCGTGCCCAGACGGATCATGTACACTCAG +
Preference number: 6 (lower is better)
Translates to: GCQRHSTSAVAS*SSVPRRIMYTQ
Trigger: CTGAGTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGCGCTGGCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409935.5
ENST00000460100.1
CDS CCA 72 bp ATTCGCTGGGCGCCCGGGAACACCAGCTTCAGCTCCTaGGCGTGGATGGCAGTGTACAGTCAGGACTGGGGC +
Preference number: 6 (lower is better)
Translates to: IRWAPGNTSFSS*AWMAVYSQDWG
Trigger: GCCCCAGTCCTGACTGTACACTGCCATCCACGCCCAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464432.5
ENST00000490895.5
CDS CCA 72 bp AGTGCCCCCACTTCATGTCGACCTCGGTTCATTCGCTaGGCGCCCGGGAACACCAGCTTCAGCTCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: SAPTSCRPRFIR*APGNTSFSSWA
Trigger: CGCCCAGGAGCTGAAGCTGGTGTTCCCGGGCGCCCAGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464432.5
ENST00000490895.5
CDS TCA 72 bp CTCCCTCCGGCCTTACCAGGTGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTGACGCCGTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LPPALPGVPRCS*TTSRSVTPLAL
Trigger: CAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTAAGGCCGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473689.5
ENST00000477375.5
CDS GCA 72 bp TCAACGGCAAGCAGCACGAGGTACACAGGGTGGGGATaGTTTCCTGGGGCATGGCCCGTGGACCCACCGGAA +
Preference number: 6 (lower is better)
Translates to: STASSTRYTGWG*FPGAWPVDPPE
Trigger: TTCCGGTGGGTCCACGGGCCATGCCCCAGGAAAGCATCCCCACCCTGTGTACCTCGTGCTGCTTGCCGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CCA 72 bp TGTGGGTCAACGGCAAGCAGCACGAGGTACACAGGGTaGGGATGCTTTCCTGGGGCATGGCCCGTGGACCCA +
Preference number: 6 (lower is better)
Translates to: CGSTASSTRYTG*GCFPGAWPVDP
Trigger: TGGGTCCACGGGCCATGCCCCAGGAAAGCATCCCCACCCTGTGTACCTCGTGCTGCTTGCCGTTGACCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CCA 72 bp CGCCCGGGAACACCAGCTTCAGCTCCTGGGCGTGGATaGCAGTGTACAGTCAGGACTGGGGCTGTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: RPGTPASAPGRG*QCTVRTGAVCP
Trigger: AGGACACACAGCCCCAGTCCTGACTGTACACTGCCATCCACGCCCAGGAGCTGAAGCTGGTGTTCCCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464432.5
ENST00000490895.5
CDS CAA 72 bp AGGCGGGAGGAGAAGCCGTGTGTGATGAGGTGGGGCTaGGCCTCCGACATGGTGCCCAGGTCTGGGATGTCA +
Preference number: 6 (lower is better)
Translates to: RREEKPCVMRWG*ASDMVPRSGMS
Trigger: TGACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGCCCCACCTCATCACACACGGCTTCTCCTCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462357.1
ENST00000464432.5
ENST00000473689.5
ENST00000490895.5
CDS TCA 72 bp CTGACGATGAGCCCCACAGGTGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTGACGCCGTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LTMSPTGVPRCS*TTSRSVTPLAL
Trigger: CAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGTGGGGCTCATCGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462357.1
ENST00000464432.5
ENST00000490895.5
CDS GCA 72 bp GCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACACTCAGTGAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: ATPRLLWPPAPA*PDGSCTLSELH
Trigger: GTGGAGCTCACTGAGTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409935.5
ENST00000460100.1
CDS CCA 72 bp ACCCCTGTAAGGCCAGAGCCTCTCGGCGTAACTCAGTaGGAATCAGGCGGTTTTCTTCCAGCGCGCGCCGCA +
Preference number: 6 (lower is better)
Translates to: TPVRPEPLGVTQ*ESGGFLPARAA
Trigger: TGCGGCGCGCGCTGGAAGAAAACCGCCTGATTCCCACTGAGTTACGCCGAGAGGCTCTGGCCTTACAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000456713.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000470672.1
ENST00000473689.5
ENST00000477375.5
ENST00000490895.5
ENST00000495606.5
CDS CCA 72 bp GAGGTGGGGCTTGGCCTCCGACATGGTGCCCAGGTCTaGGATGTCATGCCGCATGACCACATTGCACAGCGT +
Preference number: 6 (lower is better)
Translates to: EVGLGLRHGAQV*DVMPHDHIAQR
Trigger: ACGCTGTGCAATGTGGTCATGCGGCATGACATCCCAGACCTGGGCACCATGTCGGAGGCCAAGCCCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462357.1
ENST00000464432.5
ENST00000473689.5
ENST00000490895.5
CDS CCA 72 bp CTGATGGGATGGTGCCCGGTGTGTCTGAGGAAGGACTaGAGACCTGCCAGCTCAGTGTTGGGGAGGGCTACC +
Preference number: 6 (lower is better)
Translates to: LMGWCPVCLRKD*RPASSVLGRAT
Trigger: GGTAGCCCTCCCCAACACTGAGCTGGCAGGTCTCCAGTCCTTCCTCAGACACACCGGGCACCATCCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS TCA 72 bp GGAGGATGTCAGAGACCAGGTGTGCCCCGATGCTCGTaGACGACCAGCAGATCGGTGACGCCGTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: GGCQRPGVPRCS*TTSRSVTPLAL
Trigger: CAAAGCCAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTCTCTGACATCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462392.5
CDS GCA 72 bp GCCACTCCACGTCTGCTGTGGCCTCCTGCTCCAGCGTaGCCAGACGGATCATGTACAGCTTCAGCTCAAAGC +
Preference number: 6 (lower is better)
Translates to: ATPRLLWPPAPA*PDGSCTASAQS
Trigger: GCTTTGAGCTGAAGCTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCACAGCAGACGTGGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259239.8
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000475074.1
CDS CCA 72 bp AAGCAGCACGAGGTACACAGGGTGGGGATGCTTTCCTaGGGCATGGCCCGTGGACCCACCGGAATGATATGT +
Preference number: 6 (lower is better)
Translates to: KQHEVHRVGMLS*GMARGPTGMIC
Trigger: ACATATCATTCCGGTGGGTCCACGGGCCATGCCCCAGGAAAGCATCCCCACCCTGTGTACCTCGTGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CAA 72 bp AGCTCAAAGCGGGGCCCGACCTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTATACACATGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: SSKRGPTSVSST*RWSVFLYTWCR
Trigger: CCGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTTTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462357.1
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000475074.1
CDS CCA 72 bp GAGCCCTGCAATGCCATCTGTGCAGTGACAAGGGCATaGGGGACAGTTCCAGGAGCAGTTTCCTCTGATGGG +
Preference number: 6 (lower is better)
Translates to: EPCNAICAVTRA*GTVPGAVSSDG
Trigger: CCCATCAGAGGAAACTGCTCCTGGAACTGTCCCCCATGCCCTTGTCACTGCACAGATGGCATTGCAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS CCA 72 bp AGAGTCAGTGAGGCACTCCCATGTGTGCCATGTAAGTaGGACAGGGCACACTCAGGGAGAGCCCTGCAATGC +
Preference number: 6 (lower is better)
Translates to: RVSEALPCVPCK*DRAHSGRALQC
Trigger: GCATTGCAGGGCTCTCCCTGAGTGTGCCCTGTCCCACTTACATGGCACACATGGGAGTGCCTCACTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS CAA 72 bp CGGACCTCCGAAACAGGAGCTCATTCTCCTACCATCTaGAGTGCCGCTTCCACGTGGGTCCGGGAGAATCTG +
Preference number: 6 (lower is better)
Translates to: RTSETGAHSPTI*SAASTWVRENL
Trigger: CAGATTCTCCCGGACCCACGTGGAAGCGGCACTCAAGATGGTAGGAGAATGAGCTCCTGTTTCGGAGGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462392.5
CDS CAA 72 bp CGCAGCTCCGAAACAGGAGCTCATTCTCCTACCATCTaGAGTGCCGCTTCCACGTGGGTCCGGGAGAATCTG +
Preference number: 6 (lower is better)
Translates to: RSSETGAHSPTI*SAASTWVRENL
Trigger: CAGATTCTCCCGGACCCACGTGGAAGCGGCACTCAAGATGGTAGGAGAATGAGCTCCTGTTTCGGAGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490895.5
CDS TCA 72 bp GGACCTCCGAAACAGGAGCTCATTCTCCTACCATCTTaGGTGCCGCTTCCACGTGGGTCCGGGAGAATCTGT +
Preference number: 6 (lower is better)
Translates to: GPPKQELILLPS*VPLPRGSGRIC
Trigger: ACAGATTCTCCCGGACCCACGTGGAAGCGGCACTCAAGATGGTAGGAGAATGAGCTCCTGTTTCGGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462392.5
CDS TCA 72 bp ACTCACGCTTCAGCTCAAAGCGGGGCCCGACCTCAGTaGGCTCCACGTTGCGGTGGTCTGTCTTCTTATACA +
Preference number: 6 (lower is better)
Translates to: THASAQSGARPQ*APRCGGLSSYT
Trigger: TGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTTTGAGCTGAAGCGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462357.1
CDS TCA 72 bp GCAGCTCCGAAACAGGAGCTCATTCTCCTACCATCTTaGGTGCCGCTTCCACGTGGGTCCGGGAGAATCTGT +
Preference number: 6 (lower is better)
Translates to: AAPKQELILLPS*VPLPRGSGRIC
Trigger: ACAGATTCTCCCGGACCCACGTGGAAGCGGCACTCAAGATGGTAGGAGAATGAGCTCCTGTTTCGGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490895.5
CDS CCA 72 bp AAGCGGGGCCCGACCTCAGTGAGCTCCACGTTGCGGTaGTCTGTCTTCTTATACACATGGTGCCGGAATGAT +
Preference number: 6 (lower is better)
Translates to: KRGPTSVSSTLR*SVFLYTWCRND
Trigger: ATCATTCCGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462357.1
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000475074.1
CDS CCA 72 bp CTTCTTATACACATGGTGCCTGGGAGGGAACAGCTGTaGGTCAACGGCAAGCAGCACGAGGTACACAGGGTG +
Preference number: 6 (lower is better)
Translates to: LLIHMVPGREQL*VNGKQHEVHRV
Trigger: CACCCTGTGTACCTCGTGCTGCTTGCCGTTGACCCACAGCTGTTCCCTCCCAGGCACCATGTGTATAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CAA 72 bp CCTCACTCCCTGCTCACCAGTACCTTTGCAAACATCTaGAGGCGGGAACTGGGGTCTCGGGAGGTAGTGATC +
Preference number: 6 (lower is better)
Translates to: PHSLLTSTFANI*RRELGSREVVI
Trigger: GATCACTACCTCCCGAGACCCCAGTTCCCGCCTCAAGATGTTTGCAAAGGTACTGGTGAGCAGGGAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464432.5
ENST00000490895.5
CDS CAA 90 bp ATCTTGAGGCGGGAACTGGGGTCTCGGGAGGTAGTGATCATAACCTaGGGATCCTCGACTCCTGCCCATCGGTATTCATCATCCACGTGG +
Preference number: 6 (lower is better)
Translates to: ILRRELGSREVVIIT*GSSTPAHRYSSSTW
Trigger: CCACGTGGATGATGAATACCGATGGGCAGGAGTCGAGGATCCCAAGGTTATGATCACTACCTCCCGAGACCCCAGTTCCCGCCTCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000456713.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000477375.5
ENST00000490895.5
CDS CAA 90 bp TCACGCTTCAGCTCAAAGCGGGGCCCGACCTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTATACACATGGTGCCGGAATGATATG +
Preference number: 6 (lower is better)
Translates to: SRFSSKRGPTSVSST*RWSVFLYTWCRNDM
Trigger: CATATCATTCCGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTTTGAGCTGAAGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462357.1
CDS TCA 72 bp TATGACAGCCCCATCCTGAGTTCCAAGTCCATGTCCTaGCTGAGTGGTGAGTGTGCTCACTCGGTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: YDSPILSSKSMS*LSGECAHSVLR
Trigger: CCTGAGCACCGAGTGAGCACACTCACCACTCAGTCAGGACATGGACTTGGAACTCAGGATGGGGCTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259239.8
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462392.5
ENST00000475074.1
CDS CAA 72 bp CGGGAACTGGGGTCTCGGGAGGTAGTGATCATAACCTaGGGATCCTCGACTCCTGCCCATCGGTATTCATCA +
Preference number: 6 (lower is better)
Translates to: RELGSREVVIIT*GSSTPAHRYSS
Trigger: TGATGAATACCGATGGGCAGGAGTCGAGGATCCCAAGGTTATGATCACTACCTCCCGAGACCCCAGTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000456713.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000477375.5
ENST00000490895.5
CDS CAA 72 bp GCCCAGACGGATCATGTACACTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTATACACATGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: AQTDHVHSVSST*RWSVFLYTWCR
Trigger: CCGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGTGTACATGATCCGTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5
CDS CAA 90 bp TACAGCTTCAGCTCAAAGCGGGGCCCGACCTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTATACACATGGTGCCGGAATGATATG +
Preference number: 6 (lower is better)
Translates to: YSFSSKRGPTSVSST*RWSVFLYTWCRNDM
Trigger: CATATCATTCCGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGGTCGGGCCCCGCTTTGAGCTGAAGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000428740.5
ENST00000452955.1
ENST00000460766.5
ENST00000462392.5
ENST00000464432.5
ENST00000475074.1
CDS CAA 90 bp AGGAAGGACTGGAGACCTGCCAGCTCAGTGTTGGGGAGGGCTACCTaGTATAGTTACCTTCACCTCCAGCATCATCAAACTCCAGGGACC +
Preference number: 6 (lower is better)
Translates to: RKDWRPASSVLGRAT*YSYLHLQHHQTPGT
Trigger: GGTCCCTGGAGTTTGATGATGCTGGAGGTGAAGGTAACTATACAAGGTAGCCCTCCCCAACACTGAGCTGGCAGGTCTCCAGTCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS CCA 72 bp ACCCCTGTAAGGCCAGAGCCTCTCGGCGTAACTCAGTaGGAATCAGGCGGTTTTCATCACACGGAAGAAACA +
Preference number: 6 (lower is better)
Translates to: TPVRPEPLGVTQ*ESGGFHHTEET
Trigger: TGTTTCTTCCGTGTGATGAAAACCGCCTGATTCCCACTGAGTTACGCCGAGAGGCTCTGGCCTTACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452955.1
CDS CCA 72 bp ACGGATCATGTACACTCAGTGAGCTCCACGTTGCGGTaGTCTGTCTTCTTATACACATGGTGCCTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: TDHVHSVSSTLR*SVFLYTWCLGG
Trigger: CCCTCCCAGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGTGTACATGATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CAA 72 bp TGGTTTGCGAAGGTGATGACCCGGTGGCTGTCATCTTaGGGCACGGGAAATAGGTATCGGAGGATGTCAGAG +
Preference number: 6 (lower is better)
Translates to: WFAKVMTRWLSS*GTGNRYRRMSE
Trigger: CTCTGACATCCTCCGATACCTATTTCCCGTGCCCAAAGATGACAGCCACCGGGTCATCACCTTCGCAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259239.8
ENST00000409649.5
ENST00000409935.5
ENST00000428740.5
ENST00000452955.1
ENST00000460100.1
ENST00000460766.5
ENST00000462357.1
ENST00000462392.5
ENST00000464432.5
ENST00000473689.5
ENST00000475074.1
CDS CAA 72 bp TGTCTGAGGAAGGACTGGAGACCTGCCAGCTCAGTGTaGGGGAGGGCTACCTTGTATAGTTACCTTCACCTC +
Preference number: 6 (lower is better)
Translates to: CLRKDWRPASSV*GRATLYSYLHL
Trigger: GAGGTGAAGGTAACTATACAAGGTAGCCCTCCCCAACACTGAGCTGGCAGGTCTCCAGTCCTTCCTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS CAA 72 bp GCCCAGACGGATCATGTACACTCAGTGAGCTCCACGTaGCGGTGGTCTGTCTTCTTATACACATGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: AQTDHVHSVSST*RWSVFLYTWCL
Trigger: CAGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGTGTACATGATCCGTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460100.1
CDS CAA 72 bp TGGAGACCTGCCAGCTCAGTGTTGGGGAGGGCTACCTaGTATAGTTACCTTCACCTCCAGCATCATCAAACT +
Preference number: 6 (lower is better)
Translates to: WRPASSVLGRAT*YSYLHLQHHQT
Trigger: AGTTTGATGATGCTGGAGGTGAAGGTAACTATACAAGGTAGCCCTCCCCAACACTGAGCTGGCAGGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470672.1
ENST00000495606.5
CDS CCA 72 bp ACGGATCATGTACACTCAGTGAGCTCCACGTTGCGGTaGTCTGTCTTCTTATACACATGGTGCCGGAATGAT +
Preference number: 6 (lower is better)
Translates to: TDHVHSVSSTLR*SVFLYTWCRND
Trigger: ATCATTCCGGCACCATGTGTATAAGAAGACAGACCACCGCAACGTGGAGCTCACTGAGTGTACATGATCCGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409935.5