Pregenerated sensors for IMMP1L (Homo sapiens)
Ensembl gene IDs: ENSG00000148950Ensembl transcript IDs: ENST00000278200.5, ENST00000528161.5, ENST00000530023.5, ENST00000531331.1, ENST00000531693.1, ENST00000532624.5, ENST00000532668.1, ENST00000534812.5, ENST00000648582.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTGCCAAGATTGTGCACTaGAGTCCAACCTGGGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVAKIVH*SPTWVD Trigger: GTCAACCCAGGTTGGACTGCAGTGCACAATCTTGGC...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| 3UTR-3UTR CCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTACTACCAACAGAGTTTaGAGTCTGGTTCAGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVTTNRV*SLVQML Trigger: AAGCATCTGAACCAGACTCCAAACTCTGTTGGTAGT...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| 3UTR-3UTR GCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTTACTCAACTGTATCCTaGCTCTCTAGATTCATACCA | + |
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Preference number: 2 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVYSTVS*LSRFIP Trigger: TGGTATGAATCTAGAGAGGCAGGATACAGTTGAGTA...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| 3UTR-3UTR TCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACGTGTTAGCTATAGAATaGAAAAGTCACGTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: DCFRLGSHITLGIYSPYYVLAIE*KSHVTS Trigger: GGAGGTGACGTGACTTTTTCATTCTATAGCTAACAC...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| 3UTR-3UTR GCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACAATTTCAGGACAACCTaGTACTCTTTCAACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: DCFRLGSHITLGIYSPYYNFRTT*YSFNRD Trigger: ATCTCTGTTGAAAGAGTAGCAGGTTGTCCTGAAATT...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| 3UTR-3UTR CAA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTGCTGAGGCAGGAGAATaGCTTGAACCTCGAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVAEAGE*LEPRRQ Trigger: CTGCCTTCGAGGTTCAAGCAATTCTCCTGCCTCAGC...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTATTAGCCGGGCATGGTaGCAAGCGCCTGCAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVISRAW*QAPAVP Trigger: TGGGACTGCAGGCGCTTGCCACCATGCCCGGCTAAT...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CCA 90 bp | AAGAGTAAACATATTTCCTCCATATCAGCTGCAATCAAGGCATTAGCAGTATGCGACTGTTATAGCACCTaGGCGCGGTGGCTCACACCT | + |
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Preference number: 4 (lower is better) Translates to: KSKHISSISAAIKALAVCDCYST*ARWLTP Trigger: AGGTGTGAGCCACCGCGCCCAGGTGCTATAACAGTC...GCATACTGCTAATGCCTTGATTGCAGCTGATATGGAGGAAATATGTTTACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTCTGATTGTTCAGGTCTaGAATTCCTCGGGCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVLIVQV*NSSGPK Trigger: TTTGGGGCCCGAGGAATTTCAGACCTGAACAATCAG...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | AAGAGTAAACATATTTCCTCCATATCAGCTGCAATCAAGGCATTAGCAGTATGCGGCAGGAGAATTGCTTaGACCTCGAAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KSKHISSISAAIKALAVCGRRIA*TSKAEV Trigger: AACCTCTGCCTTCGAGGTTCAAGCAATTCTCCTGCC...GCATACTGCTAATGCCTTGATTGCAGCTGATATGGAGGAAATATGTTTACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR GCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTCTGAGGCAGGAGAATTaGTTGAACCTCGAAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVLRQEN*LNLEGR Trigger: TCTGCCTTCGAGGTTCAAGCAATTCTCCTGCCTCAG...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR GCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACAGTGAGCCAAGATTGTaGACTGCAGTCCAACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DCFRLGSHITLGIYSPYYSEPRL*TAVQPG Trigger: CCCAGGTTGGACTGCAGTGCACAATCTTGGCTCACT...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTATTAGCAGTATGCCATaGTTGATTATCCTAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVISSMP*LIILGA Trigger: GGCTCCTAGGATAATCAATCATGGCATACTGCTAAT...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACCCTGGGTTGACAGACTaGGAATCTGTCTCCGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: DCFRLGSHITLGIYSPYYPGLTD*ESVSER Trigger: TCTTTCGGAGACAGATTCTCAGTCTGTCAACCCAGG...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CCA 90 bp | AAGAGTAAACATATTTCCTCCATATCAGCTGCAATCAAGGCATTAGCAGTATGCGCCGTTGCTGAGAAATaGATGTGTAGCACAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KSKHISSISAAIKALAVCAVAEK*MCSTGF Trigger: AAAACCTGTGCTACACATCCATTTCTCAGCAACGGC...GCATACTGCTAATGCCTTGATTGCAGCTGATATGGAGGAAATATGTTTACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACTGCCACCATTGGCCATaGACAGGATACACACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: DCFRLGSHITLGIYSPYYCHHWP*TGYTQN Trigger: GTTTTGTGTGTATCCTGTTCATGGCCAATGGTGGCA...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | AAGAGTAAACATATTTCCTCCATATCAGCTGCAATCAAGGCATTAGCAGTATGCGTGTTAGCTATAGAATaGAAAAGTCACGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: KSKHISSISAAIKALAVCVLAIE*KSHVTS Trigger: GGAGGTGACGTGACTTTTTCATTCTATAGCTAACAC...GCATACTGCTAATGCCTTGATTGCAGCTGATATGGAGGAAATATGTTTACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | TATAGAATGAAAAAGTCACGTCACCTCCGCAGTGAACTTCACTTTAGCAAAAGAAAGAAGTTGTCCACCTaGTTGTTCAGGTCTGAAATT | + |
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Preference number: 4 (lower is better) Translates to: YRMKKSRHLRSELHFSKRKKLST*LFRSEI Trigger: AATTTCAGACCTGAACAATCAGGTGGACAACTTCTT...TCTTTTGCTAAAGTGAAGTTCACTGCGGAGGTGACGTGACTTTTTCATTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR GCA 90 bp | TATAGAATGAAAAAGTCACGTCACCTCCGCAGTGAACTTCACTTTAGCAAAAGAAATTTCAGGACAACCTaGTACTCTTTCAACAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: YRMKKSRHLRSELHFSKRNFRTT*YSFNRD Trigger: ATCTCTGTTGAAAGAGTAGCAGGTTGTCCTGAAATT...TCTTTTGCTAAAGTGAAGTTCACTGCGGAGGTGACGTGACTTTTTCATTCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACCCAAACATGACCCATTaGCACTCAACAGCAGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: DCFRLGSHITLGIYSPYYPNMTH*HSTAVF Trigger: AAAAACTGCTGTTGAGTGCCAATGGGTCATGTTTGG...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| 3UTR CAA 72 bp | ATTGGCACAGATCTTTTAAAATTAAAGCAGGCATCTTaGCTGATCCACCTCTATAAGTTGCAGGTTGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: IGTDLLKLKQAS*LIHLYKLQVEY Trigger: ATACTCAACCTGCAACTTATAGAGGTGGATCAGCAAAGATGCCTGCTTTAATTTTAAAAGATCTGTGCCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531331.1 |
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| CDS-3UTR CCA 90 bp | TATAGAATGAAAAAGTCACGTCACCTCCGCAGTGAACTTCACTTTAGCAAAAGAAAGCCACATCACACTTaGAATATATTCTCCTTACTA | + |
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Preference number: 4 (lower is better) Translates to: YRMKKSRHLRSELHFSKRKPHHT*NIFSLL Trigger: TAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTT...TCTTTTGCTAAAGTGAAGTTCACTGCGGAGGTGACGTGACTTTTTCATTCTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR TCA 90 bp | GATTGTTTTAGATTAGGAAGCCACATCACACTTGGAATATATTCTCCTTACTACACAGTAGAGTCAAGATaGGTAATTTCAGAATACCCA | + |
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Preference number: 4 (lower is better) Translates to: DCFRLGSHITLGIYSPYYTVESR*VISEYP Trigger: TGGGTATTCTGAAATTACTCATCTTGACTCTACTGT...GTAGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTCCTAATCTAAAACAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CAA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTTGCAGTGAGCCAAGATaGTGCACTGCAGTCCAACCT | + |
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Preference number: 5 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVCSEPR*CTAVQP Trigger: AGGTTGGACTGCAGTGCACAATCTTGGCTCACTGCA...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CAA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTAGGCAGGAGAATTGCTaGAACCTCGAAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVRQENC*NLEGRG Trigger: ACCTCTGCCTTCGAGGTTCAAGCAATTCTCCTGCCT...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS GCA 90 bp | GCCCTGGCCCTACATTCCCTAAGGGAATTAAATAGAGGTTTACTTTaGATTTTGCCTGCTGTGCAAACCAATAGGAGAATGCCAACTCAT | + |
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Preference number: 5 (lower is better) Translates to: ALALHSLRELNRGLL*ILPAVQTNRRMPTH Trigger: ATGAGTTGGCATTCTCCTATTGGTTTGCACAGCAGGCAAAATGCAAAGTAAACCTCTATTTAATTCCCTTAGGGAATGTAGGGCCAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528161.5 |
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| CDS TCA 90 bp | CATTGGCAAAACACACAGCTACATCCAGGCACAGTAGAGTCAAGATaGGTAATTTCAGAATACCCAAAGTCACAAGAAGTTGTCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: HWQNTQLHPGTVESR*VISEYPKSQEVVHL Trigger: CAGGTGGACAACTTCTTGTGACTTTGGGTATTCTGAAATTACTCATCTTGACTCTACTGTGCCTGGATGTAGCTGTGTGTTTTGCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531693.1 |
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| CDS TCA 90 bp | TATTTCCTCCATATCAGCTGCAATCAAGGCATTAGCAGTATGCCATaGTTGATTATCCTAGGAGCCGTTGCTGAGAAATGGATGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: YFLHISCNQGISSMP*LIILGAVAEKWMCS Trigger: GCTACACATCCATTTCTCAGCAACGGCTCCTAGGATAATCAATCATGGCATACTGCTAATGCCTTGATTGCAGCTGATATGGAGGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS GCA 90 bp | ATTAGTTCTCAGTTGCTGCCAGTTATAGCGCCAGGTGGCTTTTTCTaGAGTGAAGGTGTTACCGATAATCCCATTACACTGGTACTAAAT | + |
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Preference number: 5 (lower is better) Translates to: ISSQLLPVIAPGGFF*SEGVTDNPITLVLN Trigger: ATTTAGTACCAGTGTAATGGGATTATCGGTAACACCTTCACTGCAGAAAAAGCCACCTGGCGCTATAACTGGCAGCAACTGAGAACTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000532668.1 ENST00000534812.5 |
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| CDS-3UTR CAA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTTACTACCAACAGAGTTaGGAGTCTGGTTCAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVYYQQS*ESGSDA Trigger: AGCATCTGAACCAGACTCCAAACTCTGTTGGTAGTA...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CAA 90 bp | AAGAGTAAACATATTTCCTCCATATCAGCTGCAATCAAGGCATTAGCAGTATGCACCAAACATGACCCATaGGCACTCAACAGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: KSKHISSISAAIKALAVCTKHDP*ALNSSF Trigger: AAAACTGCTGTTGAGTGCCAATGGGTCATGTTTGGT...GCATACTGCTAATGCCTTGATTGCAGCTGATATGGAGGAAATATGTTTACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS-3UTR CAA 90 bp | ATGACCCATTGGCACTCAACAGCAGTTTTTCCAGTAGATCTAGTAAAGACTGTTGAAGCCACATCACACTaGGAATATATTCTCCTTACT | + |
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Preference number: 5 (lower is better) Translates to: MTHWHSTAVFPVDLVKTVEATSH*EYILLT Trigger: AGTAAGGAGAATATATTCCAAGTGTGATGTGGCTTC...AACAGTCTTTACTAGATCTACTGGAAAAACTGCTGTTGAGTGCCAATGGGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648582.1 |
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| CDS TCA 72 bp | ATCACCAAGGTTCCTTTTCATCCCATCCTTTCCAAATaGCTGGAAGTCGCTTCACCTCGGGCCCCAAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: ITKVPFHPILSK*LEVASPRAPKN Trigger: GTTCTTTGGGGCCCGAGGTGAAGCGACTTCCAGTCATTTGGAAAGGATGGGATGAAAAGGAACCTTGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000532668.1 ENST00000534812.5 |
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| CDS TCA 72 bp | GTGAATGAAGGCACTCAAAAGGAGAAGAACGTTACGTaGTATTACCTACCTCGGGCCCCAAAGAACCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VNEGTQKEKNVT*YYLPRAPKNPG Trigger: TCCAGGGTTCTTTGGGGCCCGAGGTAGGTAATATCACGTAACGTTCTTCTCCTTTTGAGTGCCTTCATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531693.1 |
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| CDS GCA 72 bp | CAGTTGCTGCCAGTTATAGCGCCAGGTGGCTTTTTCTaGAGTGAAGGTGTTACCGATAATCCCATTACACTG | + |
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Preference number: 6 (lower is better) Translates to: QLLPVIAPGGFF*SEGVTDNPITL Trigger: CAGTGTAATGGGATTATCGGTAACACCTTCACTGCAGAAAAAGCCACCTGGCGCTATAACTGGCAGCAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000532668.1 ENST00000534812.5 |
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| CDS CAA 72 bp | ATGACATCCAAGAGATGGGAAAGGATTAGTTCTCAGTaGCTGCCAGTTATAGCGCCAGGTGGCTTTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: MTSKRWERISSQ*LPVIAPGGFFC Trigger: GCAGAAAAAGCCACCTGGCGCTATAACTGGCAGCAACTGAGAACTAATCCTTTCCCATCTCTTGGATGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000532668.1 ENST00000534812.5 |
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| CDS TCA 72 bp | TTTCAGAATACCCAAAGTCACAAGAAGTTGTCCACCTaGTTGTTCAGGTCTGAAATTCCTCGGGCCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FQNTQSHKKLST*LFRSEIPRAPK Trigger: CTTTGGGGCCCGAGGAATTTCAGACCTGAACAATCAGGTGGACAACTTCTTGTGACTTTGGGTATTCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278200.5 ENST00000530023.5 ENST00000648582.1 |
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| CDS GCA 72 bp | ACCGCGGCCGGCCAGCAACAGCATCTTAATAGGAACTaGTTAGTTTCCAAATACATAACTATGGCTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TAAGQQQHLNRN*LVSKYITMAFK Trigger: TTTAAAAGCCATAGTTATGTATTTGGAAACTAAGCAGTTCCTATTAAGATGCTGTTGCTGGCCGGCCGCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000528161.5 ENST00000532624.5 |
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| CDS CAA 72 bp | TCCCTAAGGGAATTAAATAGAGGTTTACTTTGCATTTaGCCTGCTGTGCAAACCAATAGGAGAATGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: SLRELNRGLLCI*PAVQTNRRMPT Trigger: AGTTGGCATTCTCCTATTGGTTTGCACAGCAGGCAAAATGCAAAGTAAACCTCTATTTAATTCCCTTAGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528161.5 |
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| CDS CAA 90 bp | GCCCTACATTCCCTAAGGGAATTAAATAGAGGTTTACTTTGCATTTaGCCTGCTGTGCAAACCAATAGGAGAATGCCAACTCATTTTATT | + |
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Preference number: 6 (lower is better) Translates to: ALHSLRELNRGLLCI*PAVQTNRRMPTHFI Trigger: AATAAAATGAGTTGGCATTCTCCTATTGGTTTGCACAGCAGGCAAAATGCAAAGTAAACCTCTATTTAATTCCCTTAGGGAATGTAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528161.5 |
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| CDS CCA 72 bp | ATGCTCAGTTCATACATAACCCCAGGAAAGAATTATTaGCTTCAGTACCTTCAAAATAAGGAAAGCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: MLSSYITPGKNY*LQYLQNKESKQ Trigger: CTGTTTGCTTTCCTTATTTTGAAGGTACTGAAGCCAATAATTCTTTCCTGGGGTTATGTATGAACTGAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000528161.5 ENST00000532624.5 |
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| CDS CAA 72 bp | ATAAAATTAATCACAGTTAGCAGGGCAGAAATAGCTTaGAGCTTCATGAATGACATCCAAGAGATGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: IKLITVSRAEIA*SFMNDIQEMGK Trigger: CTTTCCCATCTCTTGGATGTCATTCATGAAGCTCAAAGCTATTTCTGCCCTGCTAACTGTGATTAATTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532668.1 ENST00000534812.5 |
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