RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ILVBL (Homo sapiens)

Ensembl gene IDs: ENSG00000105135

Ensembl transcript IDs: ENST00000263383.8, ENST00000524779.5, ENST00000525880.5, ENST00000527093.5, ENST00000531635.1, ENST00000533086.5, ENST00000533148.5, ENST00000533747.1, ENST00000534378.5, ENST00000534806.1, ENST00000596093.1, ENST00000598709.1, ENST00000599324.1, ENST00000600984.5

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGGCAGCCCGAAGCTTGTCGGCAGACGTTGGGGTGAGCAGGGCCTaGCTCCCCAGCACCATCAGAGGCCTCTTGGCCCGGCTCAGGATC +
Preference number: 1 (lower is better)
Translates to: TAARSLSADVGVSRA*LPSTIRGLLARLRI
Trigger: GATCCTGAGCCGGGCCAAGAGGCCTCTGATGGTGCTGGGGAGTCAGGCCCTGCTCACCCCAACGTCTGCCGACAAGCTTCGGGCTGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 90 bp GACCTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGTaGGCACAATGTCCCGCACCCTCCGCACAGACACACAAAACTTAC +
Preference number: 1 (lower is better)
Translates to: DLGCPTGRQPSRPSG*AQCPAPSAQTHKTY
Trigger: GTAAGTTTTGTGTGTCTGTGCGGAGGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 90 bp GCAGCGGTCCCTCGGGCTGAGGCTCCCAGGCTCCTGCAAAGAGGTTaGCCAGGTAATTCTCTAAATACCAGGAGACCACTCGGCCCACGA +
Preference number: 1 (lower is better)
Translates to: AAVPRAEAPRLLQRG*PGNSLNTRRPLGPR
Trigger: TCGTGGGCCGAGTGGTCTCCTGGTATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAGCCTGGGAGCCTCAGCCCGAGGGACCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR TCA 90 bp GGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTaGGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGAGTC +
Preference number: 1 (lower is better)
Translates to: GSVKRRVQELTREPL*DLTPPSPPQGGCGV
Trigger: GACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR CCA 90 bp GCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTaGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGAT +
Preference number: 1 (lower is better)
Translates to: ASLRFDPSIPSSGRL*SHWASWDRPRASND
Trigger: ATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR CCA 90 bp AGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGAGTCACTaGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCA +
Preference number: 1 (lower is better)
Translates to: RFDPSIPSSGRLWSH*ASWDRPRASNDETP
Trigger: TGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR CCA 90 bp GGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTaGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCT +
Preference number: 1 (lower is better)
Translates to: GGLFSLHKRGDKRHS*VREEEGPRAHKRAS
Trigger: AGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
3UTR-3UTR CCA 90 bp CACTGCGGTTCTCCCGGATGTGGAGGGGGTGGTTGCGGCCTAACAGCCCCCGTGCACAAACACCGGACCTaGGGTGCCCGACTGGGCGGC +
Preference number: 2 (lower is better)
Translates to: HCGSPGCGGGGCGLTAPVHKHRT*GARLGG
Trigger: GCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTG...CACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCGGGAGAACCGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR GCA 90 bp CTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGTGGGCACAATGTGGTTCTGCAGCAGAGTaGTGGCAGCCCCACCCAGAA +
Preference number: 2 (lower is better)
Translates to: LGCPTGRQPSRPSGWAQCGSAAE*WQPHPE
Trigger: TTCTGGGTGGGGCTGCCAGCACTCTGCTGCAGAACC...ACATTGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CCA 90 bp TCCCCAGCACCATCAGAGGCCTCTTGGCCCGGCTCAGGATCTCCACACAGCGCTGGCCCACGAGGCCCTTaGGTGGCTTGGCTGGCACCA +
Preference number: 2 (lower is better)
Translates to: SPAPSEASWPGSGSPHSAGPRGP*VAWLAP
Trigger: TGGTGCCAGCCAAGCCACCCAAGGGCCTCGTGGGCC...AGCGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGTGCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CCA 90 bp CAGCACCATCAGAGGCCTCTTGGCCCGGCTCAGGATCTCCACACAGCGCTGAACTCGCGGCCCTCAGGGTaGGCACAATGTCCCGCACCC +
Preference number: 2 (lower is better)
Translates to: QHHQRPLGPAQDLHTALNSRPSG*AQCPAP
Trigger: GGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCGA...GTTCAGCGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CCA 90 bp CACTGCGGTTCTCCCGGATGTGGAGGGGGTGGTTGCGGCCTAACAGCCCCCGTGCCATCAGAGGCCTCTTaGCCCGGCTCAGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: HCGSPGCGGGGCGLTAPVPSEAS*PGSGSP
Trigger: TGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGG...CACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCGGGAGAACCGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR GCA 90 bp TCTCCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTTGAGCAACATCACACCGGACCTGGGGTaGCCGACTGGGCGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SPCTASWGFQKMSELSNITPDLG*PTGRQP
Trigger: TGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGT...GATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR GCA 90 bp CTAACAGCCCCCGTGCCATCCCTCCAAGGAAGCAGGGAACACCCAAGGTCTCCAAGGCTCCCAGGCTCCTaGAAAGAGGTTGGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: LTAPVPSLQGSREHPRSPRLPGS*KEVGQV
Trigger: TACCTGGCCAACCTCTTTGCAGGAGCCTGGGAGCCT...TGGAGACCTTGGGTGTTCCCTGCTTCCTTGGAGGGATGGCACGGGGGCTGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CCA 90 bp CTAACAGCCCCCGTGCCATCCCTCCAAGGAAGCAGGGAACACCCAAGGTCTCCACTTGGGTGGCTTGGCTaGCACCATCTCCTTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LTAPVPSLQGSREHPRSPLGWLG*HHLLLD
Trigger: GTCCAGAAGGAGATGGTGCCAGCCAAGCCACCCAAG...TGGAGACCTTGGGTGTTCCCTGCTTCCTTGGAGGGATGGCACGGGGGCTGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR TCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCAGCCTCTCTGAGATTTaGCCCCTCCATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: REGTNGTVGSVKRRVQELSLSEI*PLHPLL
Trigger: GAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCT...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR-3UTR GCA 90 bp TGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTTGAGCAACATCTCTTCCTGTGGAGGGGGTGGTTaGGGCCTAACAGCCCCCGTG +
Preference number: 2 (lower is better)
Translates to: CTASWGFQKMSELSNISSCGGGG*GLTAPV
Trigger: CACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACA...GGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CCA 90 bp AGAGTGGCCGGAAAAGGGACAGCTGATCAACAGCCTGGAGCGCACCCCGGTTCTACCCAGAAGCAGGATTaGGGACTGAGCCATCTGAGC +
Preference number: 2 (lower is better)
Translates to: RVAGKGTADQQPGAHPGSTQKQD*GLSHLS
Trigger: GCTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGT...AGAACCGGGGTGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCGGCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGAGACTCCAAACCAGCTaGACACAGTCCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRRLQTS*TQSRGR
Trigger: CCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCT...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR-3UTR TCA 90 bp CCCAGGCTCCTGCAAAGAGGTTGGCCAGGTAATTCTCTAAATACCAGGAGACCACGGAAAAGGGACAGCTaGTCAACAGCCTGGAGCGCA +
Preference number: 2 (lower is better)
Translates to: PRLLQRGWPGNSLNTRRPRKRDS*STAWSA
Trigger: TGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCG...TGGTCTCCTGGTATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CAA 90 bp ACATCTCCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTaGAGCAACATCTCTTCCCGATTACGATTGACGATGATGATCTTG +
Preference number: 2 (lower is better)
Translates to: TSPCTASWGFQKMSE*SNISSRLRLTMMIL
Trigger: CAAGATCATCATCGTCAATCGTAATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR TCA 72 bp GCCTGGGGGATGTCCAGGGGCAGCGGTCCCTCGGGCTaGGGCTCCCAGGCTCCTGCAAAGAGGTTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: AWGMSRGSGPSG*GSQAPAKRLAR
Trigger: CCTGGCCAACCTCTTTGCAGGAGCCTGGGAGCCTCAGCCCGAGGGACCGCTGCCCCTGGACATCCCCCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 72 bp TGCCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGTaGGCACAATGTCCCGCACCCTCCGCACAGACACAC +
Preference number: 3 (lower is better)
Translates to: CPTGRQPSRPSG*AQCPAPSAQTH
Trigger: GTGTGTCTGTGCGGAGGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 72 bp GCCTTCTTCAGGGCCGCACTGCGGTTCTCCCGGATGTaGAGGGGGTGGTTGCGGCCTAACAGCCCCCGTGCC +
Preference number: 3 (lower is better)
Translates to: AFFRAALRFSRM*RGWLRPNSPRA
Trigger: GGCACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCGGGAGAACCGCAGTGCGGCCCTGAAGAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR TCA 72 bp CGAAGCTTGTCGGCAGACGTTGGGGTGAGCAGGGCCTaGCTCCCCAGCACCATCAGAGGCCTCTTGGCCCGG +
Preference number: 3 (lower is better)
Translates to: RSLSADVGVSRA*LPSTIRGLLAR
Trigger: CCGGGCCAAGAGGCCTCTGATGGTGCTGGGGAGTCAGGCCCTGCTCACCCCAACGTCTGCCGACAAGCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 72 bp GGTCTCCACGGCAGCCCGAAGCTTGTCGGCAGACGTTaGGGTGAGCAGGGCCTGACTCCCCAGCACCATCAG +
Preference number: 3 (lower is better)
Translates to: GLHGSPKLVGRR*GEQGLTPQHHQ
Trigger: CTGATGGTGCTGGGGAGTCAGGCCCTGCTCACCCCAACGTCTGCCGACAAGCTTCGGGCTGCCGTGGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CAA 90 bp GCCCCCGTGCCATCCCTCCAAGGAAGCAGGGAACACCCAAGGTCTCCACGGCAGCACCCAGAAGCAGGATaGGGGACTGAGCCATCTGAG +
Preference number: 3 (lower is better)
Translates to: APVPSLQGSREHPRSPRQHPEAG*GTEPSE
Trigger: CTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGTG...CTGCCGTGGAGACCTTGGGTGTTCCCTGCTTCCTTGGAGGGATGGCACGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR-3UTR CAA 90 bp GAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACACCCTCCTCAGGGAGGTaGTGGAGTCACTGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: EGTNGTVGSVKRRVQELTPSSGR*WSHWAS
Trigger: TGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGG...TGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR CCA 72 bp AGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTaGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: RFDPSIPSSGRL*SHWASWDRPRA
Trigger: TGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR CCA 72 bp CCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATaGGATAGGCCCAGGGCAAGCAATGATGAGACTCCA +
Preference number: 3 (lower is better)
Translates to: PSSGRLWSHWAS*DRPRASNDETP
Trigger: TGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR-3UTR CAA 90 bp TGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTTGAGCAACATCTCTTCCACGGCAGCCCGAAGCTaGTCGGCAGACGTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: CTASWGFQKMSELSNISSTAARS*SADVGV
Trigger: CACCCCAACGTCTGCCGACAAGCTTCGGGCTGCCGT...GGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 72 bp CCGCACCCTCCGCACAGACACACAAAACTTACAGAGTaGCCGGAAAAGGGACAGCTGATCAACAGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: PHPPHRHTKLTE*PEKGQLINSLE
Trigger: CTCCAGGCTGTTGATCAGCTGTCCCTTTTCCGGCCACTCTGTAAGTTTTGTGTGTCTGTGCGGAGGGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
3UTR CCA 72 bp TTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTaGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAG +
Preference number: 3 (lower is better)
Translates to: FSLHKRGDKRHS*VREEEGPRAHK
Trigger: CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
3UTR TCA 72 bp TCCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTaGGTTGAGCAACATCTCTTCCCGATTACGATTGAC +
Preference number: 3 (lower is better)
Translates to: SLHSLLGLPEDV*VEQHLFPITID
Trigger: GTCAATCGTAATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp TCCACAAACACCGGACCTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCCACAAACACCGGACCTaGGGTGCCCGACTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: STNTGPGVPDWAAAIAALHKHRT*GARLGG
Trigger: GCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTG...GAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp AGCCTGGGGGATGTCCAGGGGCAGCGGTCCCTCGGGCTGAGGCTCCCAGGCTCCCAGTCACCGTGTTGGTaGGGCCAGGGCCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SLGDVQGQRSLGLRLPGSQSPCW*GQGLLS
Trigger: TGACAGCAGGCCCTGGCCTCACCAACACGGTGACTG...GGAGCCTGGGAGCCTCAGCCCGAGGGACCGCTGCCCCTGGACATCCCCCAGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp CACTGCGGTTCTCCCGGATGTGGAGGGGGTGGTTGCGGCCTAACAGCCCCCGTGAGGGCCTGCTGTCACTaGCGCCACGCCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: HCGSPGCGGGGCGLTAPVRACCH*RHAHRP
Trigger: GGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCT...CACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCGGGAGAACCGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp TCCACAAACACCGGACCTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCTGTGGAGGGGGTGGTTaGGGCCTAACAGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: STNTGPGVPDWAAAIAALCGGGG*GLTAPV
Trigger: CACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACA...GAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp TCCACAAACACCGGACCTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCCGGATGTGGAGGGGGTaGTTGCGGCCTAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: STNTGPGVPDWAAAIAALRMWRG*LRPNSP
Trigger: GGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCG...GAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp AGCCTGGGGGATGTCCAGGGGCAGCGGTCCCTCGGGCTGAGGCTCCCAGGCTCCGAACCCACATCTCCCTaGACAGCCTCCTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLGDVQGQRSLGLRLPGSEPTSP*TASWGF
Trigger: GAAGCCCCAGGAGGCTGTGCAGGGAGATGTGGGTTC...GGAGCCTGGGAGCCTCAGCCCGAGGGACCGCTGCCCCTGGACATCCCCCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp TGGCCCGGCTCAGGATCTCCACACAGCGCTGAACCTGCTGCGGGGAAGCCTGGGGGGGTGAGCAGGGCCTaGCTCCCCAGCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: WPGSGSPHSAEPAAGKPGGVSRA*LPSTIR
Trigger: TCTGATGGTGCTGGGGAGTCAGGCCCTGCTCACCCC...CCCAGGCTTCCCCGCAGCAGGTTCAGCGCTGTGTGGAGATCCTGAGCCGGGCCA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp CGCGGCCCTCAGGGTGGGCACAATGTCCCGCACCCTCCGCACAGACACACAAAAACACCGGACCTGGGGTaGCCGACTGGGCGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RGPQGGHNVPHPPHRHTKTPDLG*PTGRQP
Trigger: TGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGT...TTTTGTGTGTCTGTGCGGAGGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp CGCGGCCCTCAGGGTGGGCACAATGTCCCGCACCCTCCGCACAGACACACAAAACGGCAGACGTTGGGGTaGGCAGGGCCTGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RGPQGGHNVPHPPHRHTKRQTLG*AGPDSP
Trigger: TGGGGAGTCAGGCCCTGCTCACCCCAACGTCTGCCG...TTTTGTGTGTCTGTGCGGAGGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp AGCCTGGAGCGCACCCCGGTTCTGCAGCAGAGTGCTGGCAGCCCCACCCAGAAGGCCCAGGTCTGGCCCTaGAGGCCCTCCACTAACTTC +
Preference number: 4 (lower is better)
Translates to: SLERTPVLQQSAGSPTQKAQVWP*RPSTNF
Trigger: GAAGTTAGTGGAGGGCCTTCAGGGCCAGACCTGGGC...CTTCTGGGTGGGGCTGCCAGCACTCTGCTGCAGAACCGGGGTGCGCTCCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp GAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAAGAGCCCCAGGCGGTaGGCGGCGCCCAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: EGTNGTVGSVKRRVQELTKSPRR*AAPSKA
Trigger: CGCCTTGCTGGGCGCCGCTCACCGCCTGGGGCTCTT...TGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR TCA 90 bp GCCATCGCGGCCCTCAGGGTGGGCACAATGTCCCGCACCCTCCGCACAGACACACCGCGGGGGTCTCCATaGGGTGGTACCTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: AIAALRVGTMSRTLRTDTPRGSP*GGTYLS
Trigger: TGACAAGTAGGTACCACCTCATGGAGACCCCCGCGG...TGTGTCTGTGCGGAGGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCGATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACCCCCTCCGTGTCACGTaGCCCGGGAGCGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDPLRVT*PGSVAV
Trigger: CACGGCCACGCTCCCGGGTCACGTGACACGGAGGGG...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR GCA 90 bp GGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGGGCCTGCTGTCACTaGCGCCACGCCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: GDKRHSWVREEEGPRAHKRACCH*RHAHRP
Trigger: GGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCT...CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCAGGGCCTGCTGTCACTaGCGCCACGCCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: REGTNGTVGSVKRRVQELRACCH*RHAHRP
Trigger: GGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCT...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp CTAACAGCCCCCGTGCCATCCCTCCAAGGAAGCAGGGAACACCCAAGGTCTCCAGGCCCACGAGGCCCTTaGGTGGCTTGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LTAPVPSLQGSREHPRSPGPRGP*VAWLAP
Trigger: TGGTGCCAGCCAAGCCACCCAAGGGCCTCGTGGGCC...TGGAGACCTTGGGTGTTCCCTGCTTCCTTGGAGGGATGGCACGGGGGCTGTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp TCCATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCGCCCAGGTCTGGCCCTaGAGGCCCTCCACTAACTTC +
Preference number: 4 (lower is better)
Translates to: SIPSSGRLWSHWASWDRPAQVWP*RPSTNF
Trigger: GAAGTTAGTGGAGGGCCTTCAGGGCCAGACCTGGGC...GGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp CACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGGGTGAGGCCAGGGCCTaGTGTCACTGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: HWASWDRPRASNDETPNQGEARA*CHCRHA
Trigger: GGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACC...CTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp CACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGACACCGGACCTGGGGTaGCCGACTGGGCGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HWASWDRPRASNDETPNQTPDLG*PTGRQP
Trigger: TGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGT...CTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGACACCGGACCTGGGGTaGCCGACTGGGCGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRASLRFDPSIPSSGRLWTPDLG*PTGRQP
Trigger: TGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGT...CCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GCCCCCGTGCCATCCCTCCAAGGAAGCAGGGAACACCCAAGGTCTCCACGGCAGAGGCTCCCAGGCTCCTaGAAAGAGGTTGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: APVPSLQGSREHPRSPRQRLPGS*KEVGQV
Trigger: TACCTGGCCAACCTCTTTGCAGGAGCCTGGGAGCCT...CTGCCGTGGAGACCTTGGGTGTTCCCTGCTTCCTTGGAGGGATGGCACGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTGGCCGTGCCCGGGTaGCCCACTTGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRVAVPG*PTWLSG
Trigger: GCCGCTGAGCCAAGTGGGCCACCCGGGCACGGCCAC...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp CCTGGGGGATGTCCAGGGGCAGCGGTCCCTCGGGCTGAGGCTCCCAGGCTCCTGACAAAACTTACAGAGTaGCCGGAAAAGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: PGGCPGAAVPRAEAPRLLTKLTE*PEKGQL
Trigger: CAGCTGTCCCTTTTCCGGCCACTCTGTAAGTTTTGT...CAGGAGCCTGGGAGCCTCAGCCCGAGGGACCGCTGCCCCTGGACATCCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp CCCCAGCACCATCAGAGGCCTCTTGGCCCGGCTCAGGATCTCCACACAGCGCTGCTTGGGTGGCTTGGCTaGCACCATCTCCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQHHQRPLGPAQDLHTALLGWLG*HHLLLD
Trigger: GTCCAGAAGGAGATGGTGCCAGCCAAGCCACCCAAG...CAGCGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp GGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGGGCCCACGAGGCCCTTaGGTGGCTTGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GPHGIGPGQAMMRLQTSWGPRGP*VAWLAP
Trigger: TGGTGCCAGCCAAGCCACCCAAGGGCCTCGTGGGCC...CCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp CTTCTTCAGGGCCGCACTGCGGTTCTCCCGGATGTGGAGGGGGTGGTTGCGGCCTCTCCTTCTGGACCATaGAGTAGGGGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: LLQGRTAVLPDVEGVVAASPSGP*SRGTAR
Trigger: ACGTGCTGTACCCCTACTTCATGGTCCAGAAGGAGA...GGCCGCAACCACCCCCTCCACATCCGGGAGAACCGCAGTGCGGCCCTGAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp AGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGAGTCGGCAGACGTTGGGGTaGGCAGGGCCTGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RASLRFDPSIPSSGRLWSRQTLG*AGPDSP
Trigger: TGGGGAGTCAGGCCCTGCTCACCCCAACGTCTGCCG...ACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCATCCTCGTTCTCCCGTaGGAGCAGCAAGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTVGSVKRRVQELTREPLILVLP*EQQAPG
Trigger: GCCCGGGGCTTGCTGCTCTCACGGGAGAACGAGGAT...GAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCGCACAGTTGGGTCCGTaGAGAGGAGGGTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSGRLWSHWASWDRPRASAQLGP*RGGSKS
Trigger: GCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGC...GCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCTGTGGAGGGGGTGGTTaGGGCCTAACAGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: REGTNGTVGSVKRRVQELCGGGG*GLTAPV
Trigger: CACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACA...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATCCGTCTCGGCACTGCTaGTGGGCATCGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: SGRLWSHWASWDRPRASNPSRHC*WASCST
Trigger: GGTGCTGCACGATGCCCAGCAGCAGTGCCGAGACGG...ATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAGGCCCACGAGGCCCTTaGGTGGCTTGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: WSHWASWDRPRASNDETPGPRGP*VAWLAP
Trigger: TGGTGCCAGCCAAGCCACCCAAGGGCCTCGTGGGCC...TGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp ATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGAGTCACTGGGCCTCATaGGATAGGCCCAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: IPSSGRLWSHWASWDRPRSHWAS*DRPRAS
Trigger: GCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACT...CCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp CTCCTGCAAAGAGGTTGGCCAGGTAATTCTCTAAATACCAGGAGACCACTCGGCAAGAGCCCCAGGCGGTaGGCGGCGCCCAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: LLQRGWPGNSLNTRRPLGKSPRR*AAPSKA
Trigger: CGCCTTGCTGGGCGCCGCTCACCGCCTGGGGCTCTT...GCCGAGTGGTCTCCTGGTATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp GGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGCAGTCACCGTGTTGGTaGGGCCAGGGCCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GPHGIGPGQAMMRLQTSWQSPCW*GQGLLS
Trigger: TGACAGCAGGCCCTGGCCTCACCAACACGGTGACTG...CCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGGGGTGAGCAGGGCCTaGCTCCCCAGCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: GTNGTVGSVKRRVQELTRGVSRA*LPSTIR
Trigger: TCTGATGGTGCTGGGGAGTCAGGCCCTGCTCACCCC...TCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGGGGTGAGCAGGGCCTaGCTCCCCAGCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLGVSRA*LPSTIR
Trigger: TCTGATGGTGCTGGGGAGTCAGGCCCTGCTCACCCC...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp ATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCGGCAGACGTTGGGGTaGGCAGGGCCTGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: IREGTNGTVGSVKRRVQERQTLG*AGPDSP
Trigger: TGGGGAGTCAGGCCCTGCTCACCCCAACGTCTGCCG...CTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp ATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGTCCAGGATATGGCGCTaGCTCCAGCAGAATTCGGCC +
Preference number: 4 (lower is better)
Translates to: IPSSGRLWSHWASWDRPRSRIWR*LQQNSA
Trigger: GGCCGAATTCTGCTGGAGGCAGCGCCATATCCTGGA...CCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCTTCTCCCGAAAGGTCTaGTCCTTCTGCCGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: SSGRLWSHWASWDRPRASFSRKV*SFCRSA
Trigger: AGCCGACCGGCAGAAGGAGCAGACCTTTCGGGAGAA...GCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp CCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGCACAGGCCACGTTGCTaGCCAGAGAGGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PRASNDETPNQLDTVQGQHRPRC*PERAPA
Trigger: AGCAGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTG...CTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGCACAGGCCACGTTGCTaGCCAGAGAGGGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GDKRHSWVREEEGPRAHKHRPRC*PERAPA
Trigger: AGCAGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTG...CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp ACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCGGCCACAGGCCACGTTaGTGCCCAGAGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: TGPHGIGPGQAMMRLQTSGHRPR*CPERAP
Trigger: AGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTGGCC...GCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCTCGCGGCCCTCAGGGTaGGCACAATGTCCCGCACCC +
Preference number: 4 (lower is better)
Translates to: WDRPRASNDETPNQLDTVSRPSG*AQCPAP
Trigger: GGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCGA...GACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp ATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCACAAACACCGGACCTaGGGTGCCCGACTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IREGTNGTVGSVKRRVQEHKHRT*GARLGG
Trigger: GCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTG...CTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp CATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGCACAAACACCGGACCTaGGGTGCCCGACTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HGIGPGQAMMRLQTSWTQHKHRT*GARLGG
Trigger: GCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTGTG...CTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp AGAGTGGCCGGAAAAGGGACAGCTGATCAACAGCCTGGAGCGCACCCCGGTTCTCTTGTCGGCAGACGTTaGGGTGAGCAGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: RVAGKGTADQQPGAHPGSLVGRR*GEQGLT
Trigger: AGTCAGGCCCTGCTCACCCCAACGTCTGCCGACAAG...AGAACCGGGGTGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCGGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp CACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCGGATGTGGAGGGGGTaGTTGCGGCCTAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: HWASWDRPRASNDETPNQRMWRG*LRPNSP
Trigger: GGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCG...CTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGACGGATGTGGAGGGGGTaGTTGCGGCCTAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: GTNGTVGSVKRRVQELTRRMWRG*LRPNSP
Trigger: GGGGCTGTTAGGCCGCAACCACCCCCTCCACATCCG...TCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACGGTTCTCCCGGATGTaGAGGGGGTGGTTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GCGVTGPHGIGPGQAMMRRFSRM*RGWLRP
Trigger: AGGCCGCAACCACCCCCTCCACATCCGGGAGAACCG...TCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCCAGACCTCAGCATCTaGCCGGCACAGCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CGVTGPHGIGPGQAMMRLPDLSI*PAQLGP
Trigger: GGGGCCAAGCTGTGCCGGCCAGATGCTGAGGTCTGG...GAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACATTGACCACAACCGGGTaGCCGTCTCGGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: EGTNGTVGSVKRRVQELTLTTTG*PSRHCC
Trigger: GCAGCAGTGCCGAGACGGCCACCCGGTTGTGGTCAA...TGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGTTGACCACAACCGGGTaGCCGTCTCGGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPHGIGPGQAMMRLQTSWLTTTG*PSRHCC
Trigger: GCAGCAGTGCCGAGACGGCCACCCGGTTGTGGTCAA...CCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GTGGCCGGAAAAGGGACAGCTGATCAACAGCCTGGAGCGCACCCCGGTTCTGCAGTACCTACTTGTCAATaGACAGGCGGAAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VAGKGTADQQPGAHPGSAVPTCQ*TGGSPA
Trigger: GGCGGGGCTTCCGCCTGTCCATTGACAAGTAGGTAC...TGCAGAACCGGGGTGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp CACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCAGTCACCGTGTTGGTaGGGCCAGGGCCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HWASWDRPRASNDETPNQQSPCW*GQGLLS
Trigger: TGACAGCAGGCCCTGGCCTCACCAACACGGTGACTG...CTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTATCCTCGTTCTCCCGTaGGAGCAGCAAGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LWSHWASWDRPRASNDETILVLP*EQQAPG
Trigger: GCCCGGGGCTTGCTGCTCTCACGGGAGAACGAGGAT...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGCAGCGGGGAAATGTaGCCACCGACCAGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GDKRHSWVREEEGPRAHKSSGEM*PPTSVK
Trigger: CTTCACGCTGGTCGGTGGGCACATTTCCCCGCTGCT...CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TCCATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCTGTCCACCACACGGATaGCCAGTTTCTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SIPSSGRLWSHWASWDRPCPPHG*PVSHRP
Trigger: TGGCCTGTGAGAAACTGGGCATCCGTGTGGTGGACA...GGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp CTCCTGCAAAGAGGTTGGCCAGGTAATTCTCTAAATACCAGGAGACCACTCGGCGGTGAGGCCAGGGCCTaGTGTCACTGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LLQRGWPGNSLNTRRPLGGEARA*CHCRHA
Trigger: GGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACC...GCCGAGTGGTCTCCTGGTATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp TCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGGTTCTGCAGCAGAGTaGTGGCAGCCCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: SGRLWSHWASWDRPRASNGSAAE*WQPHPE
Trigger: TTCTGGGTGGGGCTGCCAGCACTCTGCTGCAGAACC...ATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGAGTAAGGTCTGCTCCTTCTaGCGGTCGGCTTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RASLRFDPSIPSSGRLWSKVCSF*RSASRS
Trigger: GCTGCGGGAAGCCGACCGGCAGAAGGAGCAGACCTT...ACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGTGCACTGGGTTCAGGTaGTGGGCCACAGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: GDKRHSWVREEEGPRAHKCTGFR*WATGIA
Trigger: AGCGATGCCTGTGGCCCAGCACCTGAACCCAGTGCA...CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAACCAGCTGCAGCACCTaGACTGGGTTCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGTNGTVGSVKRRVQELTTSCST*TGFRCW
Trigger: CCAGCACCTGAACCCAGTGCAGGTGCTGCAGCTGGT...TGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGCCAGATGGGCAGCAGTaGCCACGAAGTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLPDGQQ*PRSPRH
Trigger: ATGGCGGGGACTTCGTGGGCACTGCTGCCCATCTGG...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGACCAGATGGGCAGCAGTaGCCACGAAGTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GTNGTVGSVKRRVQELTRPDGQQ*PRSPRH
Trigger: ATGGCGGGGACTTCGTGGGCACTGCTGCCCATCTGG...TCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp ACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGGGCCACAGGCCACGTTaGTGCCCAGAGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: TNGTVGSVKRRVQELTREGHRPR*CPERAP
Trigger: AGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTGGCC...CTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCACGGCCGTGACCTCATaGCGTGTGTCCACCACACGG +
Preference number: 4 (lower is better)
Translates to: CGVTGPHGIGPGQAMMRLTAVTS*RVSTTR
Trigger: CCGTGTGGTGGACACACGCCATGAGGTCACGGCCGT...GAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCACCCAGAAGCAGGATTaGGGACTGAGCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSGRLWSHWASWDRPRASTQKQD*GLSHLS
Trigger: GCTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGT...GCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp CACACAGTTCCTGCTAGGACAATGACATCCGCCTTCTTCAGGGCCGCACTGCGGCCATCAGAGGCCTCTTaGCCCGGCTCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: HTVPARTMTSAFFRAALRPSEAS*PGSGSP
Trigger: TGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGG...CCGCAGTGCGGCCCTGAAGAAGGCGGATGTCATTGTCCTAGCAGGAACTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCCTTGTCGGCAGACGTTaGGGTGAGCAGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: REGTNGTVGSVKRRVQELLVGRR*GEQGLT
Trigger: AGTCAGGCCCTGCTCACCCCAACGTCTGCCGACAAG...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GAAGCAGGATTGGGGACTGAGCCATCTGAGCATTCTTCACCGCAGTCACCGTGTCGGTTCTCCCGGATGTaGAGGGGGTGGTTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: EAGLGTEPSEHSSPQSPCRFSRM*RGWLRP
Trigger: AGGCCGCAACCACCCCCTCCACATCCGGGAGAACCG...ACACGGTGACTGCGGTGAAGAATGCTCAGATGGCTCAGTCCCCAATCCTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCGGTTCTCCCGGATGTaGAGGGGGTGGTTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LWSHWASWDRPRASNDETRFSRM*RGWLRP
Trigger: AGGCCGCAACCACCCCCTCCACATCCGGGAGAACCG...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGACTGGGTTCAGGTGCTaGGCCACAGGCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLTGFRC*ATGIAA
Trigger: GGCAGCGATGCCTGTGGCCCAGCACCTGAACCCAGT...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACCTGCAGCACCTGCACTaGGTTCAGGTGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDLQHLH*VQVLGH
Trigger: GTGGCCCAGCACCTGAACCCAGTGCAGGTGCTGCAG...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp ACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCCGGGGCTGTACCAGATaGGCAGCAGTGCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: TGPHGIGPGQAMMRLQTSRGCTR*AAVPTK
Trigger: CTTCGTGGGCACTGCTGCCCATCTGGTACAGCCCCG...GCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACCGGGGCTGTACCAGATaGGCAGCAGTGCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDRGCTR*AAVPTK
Trigger: CTTCGTGGGCACTGCTGCCCATCTGGTACAGCCCCG...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGCCAGACCTCAGCATCTaGCCGGCACAGCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRPDLSI*PAQLGP
Trigger: GGGGCCAAGCTGTGCCGGCCAGATGCTGAGGTCTGG...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCAGTCACTGGGCCTCATaGGATAGGCCCAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: REGTNGTVGSVKRRVQELSHWAS*DRPRAS
Trigger: GCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACT...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCCGGAAAAGGGACAGCTaGTCAACAGCCTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GTVGSVKRRVQELTREPLRKRDS*STAWSA
Trigger: TGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCG...GAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGCACCTTGACCACCTaGTCCTCGTTCTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: GDKRHSWVREEEGPRAHKSTLTT*SSFSRE
Trigger: CTCACGGGAGAACGAGGATCAGGTGGTCAAGGTGCT...CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp CACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGGGCAGCCAAGCGTCCTaGCCCACAAGGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: HWASWDRPRASNDETPNQGSQAS*PTRPYT
Trigger: TGTATAGGGCCTTGTGGGTCAGGACGCTTGGCTGCC...CTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGCCATGCCGGACGCTTaGCTTGTCCACCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLAMPDA*LVHLVQ
Trigger: CTGCACAAGGTGGACAAGGCAAGCGTCCGGCATGGC...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR GCA 90 bp TGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAGCAGCGGGGAAATGTaGCCACCGACCAGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: WSHWASWDRPRASNDETPSSGEM*PPTSVK
Trigger: CTTCACGCTGGTCGGTGGGCACATTTCCCCGCTGCT...TGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGAGGTTCTGCAGCAGAGTaGTGGCAGCCCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: GCGVTGPHGIGPGQAMMRGSAAE*WQPHPE
Trigger: TTCTGGGTGGGGCTGCCAGCACTCTGCTGCAGAACC...TCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGCTTGGCTGGCACCATCTCCTTCTGGACCATGAAGTAGGGGTACAGCACGTCGGTTCTGCAGCAGAGTaGTGGCAGCCCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: WLGWHHLLLDHEVGVQHVGSAAE*WQPHPE
Trigger: TTCTGGGTGGGGCTGCCAGCACTCTGCTGCAGAACC...GACGTGCTGTACCCCTACTTCATGGTCCAGAAGGAGATGGTGCCAGCCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp TCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATAGGCTCCCAGGCTCCTaGAAAGAGGTTGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SGRLWSHWASWDRPRASNRLPGS*KEVGQV
Trigger: TACCTGGCCAACCTCTTTGCAGGAGCCTGGGAGCCT...ATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp ACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTCTTCAGGGCCGCACTaGGGTTCTCCCGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: TGPHGIGPGQAMMRLQTSSSGPH*GSPGCG
Trigger: TCCACATCCGGGAGAACCGCAGTGCGGCCCTGAAGA...GCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACTCTTCAGGGCCGCACTaGGGTTCTCCCGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDSSGPH*GSPGCG
Trigger: TCCACATCCGGGAGAACCGCAGTGCGGCCCTGAAGA...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGAACCCACATCTCCCTaGACAGCCTCCTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLEPTSP*TASWGF
Trigger: GAAGCCCCAGGAGGCTGTGCAGGGAGATGTGGGTTC...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACGAACCCACATCTCCCTaGACAGCCTCCTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDEPTSP*TASWGF
Trigger: GAAGCCCCAGGAGGCTGTGCAGGGAGATGTGGGTTC...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGAAGGTCTGCTCCTTCTaGCGGTCGGCTTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRKVCSF*RSASRS
Trigger: GCTGCGGGAAGCCGACCGGCAGAAGGAGCAGACCTT...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCTTCTCCCGAAAGGTCTaGTCCTTCTGCCGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: REGTNGTVGSVKRRVQELFSRKV*SFCRSA
Trigger: AGCCGACCGGCAGAAGGAGCAGACCTTTCGGGAGAA...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCGGCCACAGGCATCGCTaGCTTCTCCCGAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPGHRHR*LLPKGL
Trigger: CAGACCTTTCGGGAGAAGGCAGCGATGCCTGTGGCC...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGGCCACAGGCATCGCTaGCTTCTCCCGAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTNGTVGSVKRRVQELTRGHRHR*LLPKGL
Trigger: CAGACCTTTCGGGAGAAGGCAGCGATGCCTGTGGCC...TCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACTGCACTGGGTTCAGGTaGTGGGCCACAGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDCTGFR*WATGIA
Trigger: AGCGATGCCTGTGGCCCAGCACCTGAACCCAGTGCA...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCACCAGCTGCAGCACCTaGACTGGGTTCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPTSCST*TGFRCW
Trigger: CCAGCACCTGAACCCAGTGCAGGTGCTGCAGCTGGT...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGTTTCCTCCACCAGCTaGAGCACCTGCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGRLWSHWASWDRPRASNVSSTS*STCTGF
Trigger: GAACCCAGTGCAGGTGCTGCAGCTGGTGGAGGAAAC...ATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGCCCAGAGAGGGCACCTaGTCCCGAGAAATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GDKRHSWVREEEGPRAHKPREGT*SREICV
Trigger: GACACAGATTTCTCGGGAGCAGGTGCCCTCTCTGGG...CTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGGCCATGCCGGACGCTTaGCTTGTCCACCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: KRASLRFDPSIPSSGRLWAMPDA*LVHLHL
Trigger: GAGGTGAAGGTGGACAAGGCAAGCGTCCGGCATGGC...CCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534378.5
CDS-3UTR CCA 90 bp ATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGTTCACCTCCAGGATATaGCGCTGCCTCCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: IPSSGRLWSHWASWDRPRFTSRI*RCLQQN
Trigger: ATTCTGCTGGAGGCAGCGCCATATCCTGGAGGTGAA...CCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCTTCACCTCCAGGATATaGCGCTGCCTCCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSGRLWSHWASWDRPRASFTSRI*RCLQQN
Trigger: ATTCTGCTGGAGGCAGCGCCATATCCTGGAGGTGAA...GCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCCTTGGGTGGCTTGGCTaGCACCATCTCCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GTVGSVKRRVQELTREPLLGWLG*HHLLLD
Trigger: GTCCAGAAGGAGATGGTGCCAGCCAAGCCACCCAAG...GAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCACCATCAGAGGCCTCTTaGCCCGGCTCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: WSHWASWDRPRASNDETPPSEAS*PGSGSP
Trigger: TGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGG...TGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCCCATCAGAGGCCTCTTaGCCCGGCTCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPPSEAS*PGSGSP
Trigger: TGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGG...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGACTGGCCGGCACAGCTTaGCCCCAAGTGCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: GTNGTVGSVKRRVQELTRLAGTA*PQVQIL
Trigger: CAGGATTTGCACTTGGGGCCAAGCTGTGCCGGCCAG...TCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGGGCCCTATACAGCAATaGAGCCATCGCGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: GPHGIGPGQAMMRLQTSWGPIQQ*SHRGSP
Trigger: CGGACTTCCGCGATGGCTCCATTGCTGTATAGGGCC...CCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCGACAAACGGCACAGTTaGGTCCGTGAAGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPGQAMMRLQTSWTQSRGDKRHS*VREEEG
Trigger: ACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTC...GCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGCCTACATGGGCCAGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACCCGCGGGGGTCTCCATaGGGTGGTACCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GLHGPEVVYSVSIREGTNPRGSP*GGTFTS
Trigger: GGAGGTGAAGGTACCACCTCATGGAGACCCCCGCGG...GTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCTGGCCCATGTAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR TCA 90 bp AATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGGAAGGCAGCCAACAGCAAAGACGGCCGTaGCCTCATGGCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NDETPNQLDTVQGQEGSQQQRRP*PHGVCP
Trigger: TGGACACACGCCATGAGGTCACGGCCGTCTTTGCTG...TTGGCTGCCTTCCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp CCCCAGCACCATCAGAGGCCTCTTGGCCCGGCTCAGGATCTCCACACAGCGCTGCTTCCAGAAGATGTCTaGGTTGAGCAACATCTCTTC +
Preference number: 4 (lower is better)
Translates to: PQHHQRPLGPAQDLHTALLPEDV*VEQHLF
Trigger: GAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAG...CAGCGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGTGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGGCAGCCAAGCGTCCTaGCCCACAAGGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRGSQAS*PTRPYT
Trigger: TGTATAGGGCCTTGTGGGTCAGGACGCTTGGCTGCC...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCAGCCTCTCTGAGATTTaGCCCCTCCATCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPSLSEI*PLHPLL
Trigger: GAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCT...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGCACAGTTGGGTCCGTaGAGAGGAGGGTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRAQLGP*RGGSKS
Trigger: GCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGC...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGTCCAGGATATGGCGCTaGCTCCAGCAGAATTCGGCC +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLSRIWR*LQQNSA
Trigger: GGCCGAATTCTGCTGGAGGCAGCGCCATATCCTGGA...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WDRPRASNDETPNQLDTVTFSPP*RTLALS
Trigger: GGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGT...GACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp CATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HGIGPGQAMMRLQTSWTQTFSPP*RTLALS
Trigger: GGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGT...CTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCCCCAAGTGCAAATCCTaGACCAACTCCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: REGTNGTVGSVKRRVQELPKCKS*TNSQSP
Trigger: GGGACTCTGGGAGTTGGTGCAGGATTTGCACTTGGG...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCCCGTCTCGGCACTGCTaGTGGGCATCGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: EVVYSVSIREGTNGTVGSPSRHC*WASCST
Trigger: GGTGCTGCACGATGCCCAGCAGCAGTGCCGAGACGG...GGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp GGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACCCAGAAGCAGGATTaGGGACTGAGCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: GPHGIGPGQAMMRLQTSWTQKQD*GLSHLS
Trigger: GCTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGT...CCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCTTGTCGGCAGACGTTaGGGTGAGCAGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: LWSHWASWDRPRASNDETLVGRR*GEQGLT
Trigger: AGTCAGGCCCTGCTCACCCCAACGTCTGCCGACAAG...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCGGGCCCCCAGACCCATaGCTGCCTTGTGATAATCAG +
Preference number: 4 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPGPPDP*LPCDNQ
Trigger: CTGATTATCACAAGGCAGCCATGGGTCTGGGGGCCC...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp AAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGAGACTCCAAACCAGCTaGACACAGTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRASLRFDPSIPSSGRLWRLQTS*TQSRGR
Trigger: CCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCT...CCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACAGGTTGTGGAGTCACTaGGCCTCATGGGATAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDRLWSH*ASWDRP
Trigger: GGGCCTATCCCATGAGGCCCAGTGACTCCACAACCT...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGAAGGTTGTGGAGTCACTaGGCCTCATGGGATAGGCCC +
Preference number: 4 (lower is better)
Translates to: GCGVTGPHGIGPGQAMMRRLWSH*ASWDRP
Trigger: GGGCCTATCCCATGAGGCCCAGTGACTCCACAACCT...TCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TCTCCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTTGAGCAACATCCGGAAAAGGGACAGCTaGTCAACAGCCTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SPCTASWGFQKMSELSNIRKRDS*STAWSA
Trigger: TGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCG...GATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp TCCCCAGCACCATCAGAGGCCTCTTGGCCCGGCTCAGGATCTCCACACAGCGCTAGAAGATGTCTGAGTTaGGCAACATCTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SPAPSEASWPGSGSPHSARRCLS*ATSLPD
Trigger: ATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCT...AGCGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGTGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp GAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGCCCAGGTCTGGCCCTaGAGGCCCTCCACTAACTTC +
Preference number: 4 (lower is better)
Translates to: EVVYSVSIREGTNGTVGSAQVWP*RPSTNF
Trigger: GAAGTTAGTGGAGGGCCTTCAGGGCCAGACCTGGGC...GGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR TCA 90 bp CATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGAGCACCTTGACCACCTaGTCCTCGTTCTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: HGIGPGQAMMRLQTSWTQSTLTT*SSFSRE
Trigger: CTCACGGGAGAACGAGGATCAGGTGGTCAAGGTGCT...CTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTAGCCTCTCTGAGATTTaGCCCCTCCATCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LWSHWASWDRPRASNDETSLSEI*PLHPLL
Trigger: GAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCT...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp AAGCAGGATTGGGGACTGAGCCATCTGAGCATTCTTCACCGCAGTCACCGTGTTTCTTCAGGGCCGCACTaGGGTTCTCCCGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: KQDWGLSHLSILHRSHRVSSGPH*GSPGCG
Trigger: TCCACATCCGGGAGAACCGCAGTGCGGCCCTGAAGA...AACACGGTGACTGCGGTGAAGAATGCTCAGATGGCTCAGTCCCCAATCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR GCA 90 bp TCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTTTCCTCCACCAGCTaGAGCACCTGCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SVSIREGTNGTVGSVKRRVSSTS*STCTGF
Trigger: GAACCCAGTGCAGGTGCTGCAGCTGGTGGAGGAAAC...CCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACCCAAGTGCAAATCCTaGACCAACTCCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GCGVTGPHGIGPGQAMMRPKCKS*TNSQSP
Trigger: GGGACTCTGGGAGTTGGTGCAGGATTTGCACTTGGG...TCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp CACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCAGCTTGGCCCCAAGTaGAAATCCTGCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: HWASWDRPRASNDETPNQQLGPK*KSCTNS
Trigger: GGAGTTGGTGCAGGATTTGCACTTGGGGCCAAGCTG...CTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGCAGCTTGGCCCCAAGTaGAAATCCTGCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLQLGPK*KSCTNS
Trigger: GGAGTTGGTGCAGGATTTGCACTTGGGGCCAAGCTG...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp GAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCAGAGAGGGCACCTaGTCCCGAGAAATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EEGPRAHKRASLRFDPSIPREGT*SREICV
Trigger: GACACAGATTTCTCGGGAGCAGGTGCCCTCTCTGGG...GATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGAGGGGTCTCCATGAGGTaGTACCTTCACCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GCGVTGPHGIGPGQAMMRGVSMR*YLHLQD
Trigger: ATCCTGGAGGTGAAGGTACCACCTCATGGAGACCCC...TCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp ACATGGGCCAGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACACTGGGTTCAGGTGCTaGGCCACAGGCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TWARGGLFSLHKRGDKRHTGFRC*ATGIAA
Trigger: GGCAGCGATGCCTGTGGCCCAGCACCTGAACCCAGT...GTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCTGGCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp GGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTCTGCAGCACCTGCACTaGGTTCAGGTGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGLFSLHKRGDKRHSWVRLQHLH*VQVLGH
Trigger: GTGGCCCAGCACCTGAACCCAGTGCAGGTGCTGCAG...ACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp AATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGGAAGGCAGCCAAGGGCCCCCAGACCCATaGCTGCCTTGTGATAATCAG +
Preference number: 4 (lower is better)
Translates to: NDETPNQLDTVQGQEGSQGPPDP*LPCDNQ
Trigger: CTGATTATCACAAGGCAGCCATGGGTCTGGGGGCCC...TTGGCTGCCTTCCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTAGACTCCAAACCAGCTaGACACAGTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LWSHWASWDRPRASNDETRLQTS*TQSRGR
Trigger: CCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCT...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGCGGAAAAGGGACAGCTaGTCAACAGCCTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: FSLHKRGDKRHSWVREEERKRDS*STAWSA
Trigger: TGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCG...CTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGATTCCTGCTAGGACAATaGCATCCGCCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GTNGTVGSVKRRVQELTRFLLGQ*HPPSSG
Trigger: CCCTGAAGAAGGCGGATGTCATTGTCCTAGCAGGAA...TCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TGGCTTGGCTGGCACCATCTCCTTCTGGACCATGAAGTAGGGGTACAGCACGTCTTCCTGCTAGGACAATaGCATCCGCCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WLGWHHLLLDHEVGVQHVFLLGQ*HPPSSG
Trigger: CCCTGAAGAAGGCGGATGTCATTGTCCTAGCAGGAA...GACGTGCTGTACCCCTACTTCATGGTCCAGAAGGAGATGGTGCCAGCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR TCA 90 bp AAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGTTCCTGCTAGGACAATaGCATCCGCCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KRASLRFDPSIPSSGRLWFLLGQ*HPPSSG
Trigger: CCCTGAAGAAGGCGGATGTCATTGTCCTAGCAGGAA...CCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp ATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGAGAAGATGTCTGAGTTaGGCAACATCTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: IPSSGRLWSHWASWDRPRRRCLS*ATSLPD
Trigger: ATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCT...CCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp TCCATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGAAGATGTCTGAGTTaGGCAACATCTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SIPSSGRLWSHWASWDRPRRCLS*ATSLPD
Trigger: ATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCT...GGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp ACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCACAAGAGAGCCTCTCTaGGATTTGACCCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TGPHGIGPGQAMMRLQTSTREPL*DLTPPS
Trigger: GGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGT...GCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCACAAGAGAGCCTCTCTaGGATTTGACCCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPTREPL*DLTPPS
Trigger: GGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGT...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTTGTCCACCACACGGATaGCCAGTTTCTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LWSHWASWDRPRASNDETCPPHG*PVSHRP
Trigger: TGGCCTGTGAGAAACTGGGCATCCGTGTGGTGGACA...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp GGGCCTACATGGGCCAGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACTGGCCGGCACAGCTTaGCCCCAAGTGCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: GPTWARGGLFSLHKRGDKLAGTA*PQVQIL
Trigger: CAGGATTTGCACTTGGGGCCAAGCTGTGCCGGCCAG...TTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCTGGCCCATGTAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp CATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGGACAAACGGCACAGTTaGGTCCGTGAAGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HGIGPGQAMMRLQTSWTQDKRHS*VREEEG
Trigger: ACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTC...CTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp ACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGTCTCCTTCTGGACCATaGAGTAGGGGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: TNGTVGSVKRRVQELTRESPSGP*SRGTAR
Trigger: ACGTGCTGTACCCCTACTTCATGGTCCAGAAGGAGA...CTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp AATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGGAAGGCAGCCAATCTCCTTCTGGACCATaGAGTAGGGGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: NDETPNQLDTVQGQEGSQSPSGP*SRGTAR
Trigger: ACGTGCTGTACCCCTACTTCATGGTCCAGAAGGAGA...TTGGCTGCCTTCCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCCTTCCAGAAGATGTCTaGGTTGAGCAACATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPGQAMMRLQTSWTQSRGLPEDV*VEQHLF
Trigger: GAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAG...GCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp ATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGCTGGGATCTTGTGTCTaGCGAATGTATCAAATTCGA +
Preference number: 4 (lower is better)
Translates to: IPSSGRLWSHWASWDRPRLGSCV*RMYQIR
Trigger: TCGAATTTGATACATTCGTCAGACACAAGATCCCAG...CCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGCCCCAGACCCATGGCTaGCTTGTGATAATCAGTGTA +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLPQTHG*LVIISV
Trigger: TACACTGATTATCACAAGGCAGCCATGGGTCTGGGG...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR GCA 90 bp ACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCCCCCAGACCCATGGCTaGCTTGTGATAATCAGTGTA +
Preference number: 4 (lower is better)
Translates to: TGPHGIGPGQAMMRLQTSPQTHG*LVIISV
Trigger: TACACTGATTATCACAAGGCAGCCATGGGTCTGGGG...GCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp AAGCAGGATTGGGGACTGAGCCATCTGAGCATTCTTCACCGCAGTCACCGTGTTACCCAGAAGCAGGATTaGGGACTGAGCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: KQDWGLSHLSILHRSHRVTQKQD*GLSHLS
Trigger: GCTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGT...AACACGGTGACTGCGGTGAAGAATGCTCAGATGGCTCAGTCCCCAATCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp GGGCCTACATGGGCCAGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAAGGCCCTATACAGCAATaGAGCCATCGCGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: GPTWARGGLFSLHKRGDKGPIQQ*SHRGSP
Trigger: CGGACTTCCGCGATGGCTCCATTGCTGTATAGGGCC...TTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCTGGCCCATGTAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR GCA 90 bp AGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCAGGCTCCCAGGCTCCTaGAAAGAGGTTGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RGGLFSLHKRGDKRHSWVRLPGS*KEVGQV
Trigger: TACCTGGCCAACCTCTTTGCAGGAGCCTGGGAGCCT...GACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CCA 90 bp AGAGCCTCTCTGAGATTTGACCCCTCCATCCCCTCCTCAGGGAGGTTGTGGAGTACAAAACTTACAGAGTaGCCGGAAAAGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RASLRFDPSIPSSGRLWSTKLTE*PEKGQL
Trigger: CAGCTGTCCCTTTTCCGGCCACTCTGTAAGTTTTGT...ACTCCACAACCTCCCTGAGGAGGGGATGGAGGGGTCAAATCTCAGAGAGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp AGAGTGGCCGGAAAAGGGACAGCTGATCAACAGCCTGGAGCGCACCCCGGTTCTCTCCTGCAAAGAGGTTaGCCAGGTAATTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: RVAGKGTADQQPGAHPGSLLQRG*PGNSLN
Trigger: ATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAG...AGAACCGGGGTGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCGGCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGTACCAAGGCCATCACTaGGATCTTGTGTCTGACGAA +
Preference number: 4 (lower is better)
Translates to: WASWDRPRASNDETPNQLYQGHH*DLVSDE
Trigger: TTCGTCAGACACAAGATCCCAGTGATGGCCTTGGTA...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TCTCCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTTGAGCAACATCGGGGTCTCCATGAGGTaGTACCTACTTGTCAATGGA +
Preference number: 4 (lower is better)
Translates to: SPCTASWGFQKMSELSNIGVSMR*YLLVNG
Trigger: TCCATTGACAAGTAGGTACCACCTCATGGAGACCCC...GATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CCA 90 bp GGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCCTCCTGCAAAGAGGTTaGCCAGGTAATTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GTVGSVKRRVQELTREPLLLQRG*PGNSLN
Trigger: ATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAG...GAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp GCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACCTGGGATCTTGTGTCTaGCGAATGTATCAAATTCGA +
Preference number: 4 (lower is better)
Translates to: ASWDRPRASNDETPNQLDLGSCV*RMYQIR
Trigger: TCGAATTTGATACATTCGTCAGACACAAGATCCCAG...GTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp ACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCCTCCTGCAAAGAGGTTaGCCAGGTAATTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: TGPHGIGPGQAMMRLQTSLLQRG*PGNSLN
Trigger: ATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAG...GCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp TTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGTACCAAGGCCATCACTaGGATCTTGTGTCTGACGAA +
Preference number: 4 (lower is better)
Translates to: FSLHKRGDKRHSWVREEEYQGHH*DLVSDE
Trigger: TTCGTCAGACACAAGATCCCAGTGATGGCCTTGGTA...CTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp CATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGATGTATCAAATTCGATaGGGCTGTAGCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: HGIGPGQAMMRLQTSWTQMYQIR*GCSQKL
Trigger: GAGCTTTTGGCTACAGCCTCATCGAATTTGATACAT...CTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR TCA 90 bp AATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGGAAGGCAGCCAAATGTATCAAATTCGATaGGGCTGTAGCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: NDETPNQLDTVQGQEGSQMYQIR*GCSQKL
Trigger: GAGCTTTTGGCTACAGCCTCATCGAATTTGATACAT...TTGGCTGCCTTCCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CCA 90 bp ACATGGGCCAGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACACAAAACTTACAGAGTaGCCGGAAAAGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TWARGGLFSLHKRGDKRHTKLTE*PEKGQL
Trigger: CAGCTGTCCCTTTTCCGGCCACTCTGTAAGTTTTGT...GTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCTGGCCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR TCA 90 bp GGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTCTTCCAGAAGATGTCTaGGTTGAGCAACATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGLFSLHKRGDKRHSWVRLPEDV*VEQHLF
Trigger: GAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAG...ACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAATAAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS GCA 90 bp CAGAATTCGGCCCCCTCCGTGTCACGTGACCCGGGAGCGTGGCCGTaGCCGGGTGGCCCACTTGGCTCAGCGGCGCCCCGTAGTCCGGCC +
Preference number: 5 (lower is better)
Translates to: QNSAPSVSRDPGAWP*PGGPLGSAAPRSPA
Trigger: GGCCGGACTACGGGGCGCCGCTGAGCCAAGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCACGTGACACGGAGGGGGCCGAATTCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS CCA 90 bp CTCCAGCAGAATTCGGCCCCCTCCGTGTCACGTGACCCGGGAGCGTaGCCGTGCCCGGGTGGCCCACTTGGCTCAGCGGCGCCCCGTAGT +
Preference number: 5 (lower is better)
Translates to: LQQNSAPSVSRDPGA*PCPGGPLGSAAPRS
Trigger: ACTACGGGGCGCCGCTGAGCCAAGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCACGTGACACGGAGGGGGCCGAATTCTGCTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000531635.1
CDS CCA 90 bp CCCCTCGGCCCCAGCACTGCTCAGCATCACCATCCTCCACCTACCTaGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLGPSTAQHHHPPPT*GARLGGSHRGPQGG
Trigger: CCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTAGGTGGAGGATGGTGATGCTGAGCAGTGCTGGGGCCGAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS TCA 90 bp GATATGGCGCTGCCTCCAGCAGAATTCGGCCCCCTCCGTGTCACGTaGCCCGGGAGCGTGGCCGTGCCCGGGTGGCCCACTTGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: DMALPPAEFGPLRVT*PGSVAVPGWPTWLS
Trigger: GCTGAGCCAAGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCACGTGACACGGAGGGGGCCGAATTCTGCTGGAGGCAGCGCCATATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000531635.1
CDS GCA 90 bp CGGCCCCAGCACTGCTCAGCATCACCATCCTCCACCTACCTGGGGTaGCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGTGGGCACAA +
Preference number: 5 (lower is better)
Translates to: RPQHCSASPSSTYLG*PTGRQPSRPSGWAQ
Trigger: TTGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTAGGTGGAGGATGGTGATGCTGAGCAGTGCTGGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS-3UTR CAA 90 bp CAAACACCGGACCTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGACCATCAGAGGCCTCTaGGCCCGGCTCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: QTPDLGCPTGRQPSRPSGTIRGL*ARLRIS
Trigger: GGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGT...CCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTCCGGTGTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS TCA 90 bp CACGCAACCCACGCCTCTCCCTTAAAGAGCGCACGGGCCCGAGCCTaGTCCCCGACCCCGGGCCAGGCTGGGTCGAGGTCACATCGCATC +
Preference number: 5 (lower is better)
Translates to: HATHASPLKSARARA*SPTPGQAGSRSHRI
Trigger: GATGCGATGTGACCTCGACCCAGCCTGGCCCGGGGTCGGGGATCAGGCTCGGGCCCGTGCGCTCTTTAAGGGAGAGGCGTGGGTTGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533148.5
ENST00000533747.1
CDS GCA 90 bp TCTCGCAGCAGGATCCAGGGCCACGACCCTTGCCGCCAGTTTCTGTaGGGCCACGCCCCCAACCCTGCCAGACCACGCCCTTTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: SRSRIQGHDPCRQFL*GHAPNPARPRPLCA
Trigger: GGCGCACAAAGGGCGTGGTCTGGCAGGGTTGGGGGCGTGGCCGCACAGAAACTGGCGGCAAGGGTCGTGGCCCTGGATCCTGCTGCGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS CCA 90 bp GCACTGCTCAGCATCACCATCCTCCACCTACCTGGGGTGCCCGACTaGGCGGCAGCCATCGCGGCCCTCAGGGTGGGCACAATGTCCCGC +
Preference number: 5 (lower is better)
Translates to: ALLSITILHLPGVPD*AAAIAALRVGTMSR
Trigger: GCGGGACATTGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTAGGTGGAGGATGGTGATGCTGAGCAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp CTGAGCATTCTTCACCGCAGTCACCGTGTTGGTGAGGCCAGGGCCTaGTGTCACTGCCGCCACGCCCACCGTCCCGGACAGGCGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LSILHRSHRVGEARA*CHCRHAHRPGQAGH
Trigger: ATGGCCCGCCTGTCCGGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACCAACACGGTGACTGCGGTGAAGAATGCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS GCA 90 bp CGCACACCATGGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCCACCTGGGCCCAAGGACAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RTPWALSTAATFSPP*RTLALSTWAQGQVE
Trigger: CTCCACCTGTCCTTGGGCCCAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCCATGGTGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS TCA 90 bp GGGACTGAGCCATCTGAGCATTCTTCACCGCAGTCACCGTGTTGGTaGGGCCAGGGCCTGCTGTCACTGCCGCCACGCCCACCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GTEPSEHSSPQSPCW*GQGLLSLPPRPPSR
Trigger: CCGGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACCAACACGGTGACTGCGGTGAAGAATGCTCAGATGGCTCAGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS GCA 90 bp CCAAGAGCAGGTGGGTGTGAAGGCGTCCTGATGGATGGTGCCCACTaGCCCAGGCGGGGGCCCTTCCTTACCAGGATCGAGCCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: PRAGGCEGVLMDGAH*PRRGPFLTRIEPAQ
Trigger: CTGCGCTGGCTCGATCCTGGTAAGGAAGGGCCCCCGCCTGGGGCAGTGGGCACCATCCATCAGGACGCCTTCACACCCACCTGCTCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525880.5
ENST00000534806.1
CDS GCA 90 bp AGAAATCGCGCCCCTTCTCGCAGCAGGATCCAGGGCCACGACCCTTaGCGCCAGTTTCTGTGCGGCCACGCCCCCAACCCTGCCAGACCA +
Preference number: 5 (lower is better)
Translates to: RNRAPSRSRIQGHDP*RQFLCGHAPNPARP
Trigger: TGGTCTGGCAGGGTTGGGGGCGTGGCCGCACAGAAACTGGCGGCAAGGGTCGTGGCCCTGGATCCTGCTGCGAGAAGGGGCGCGATTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS TCA 90 bp CTGGGCATCGTGCAGCACCTTGACCACCTGATCCTCGTTCTCCCGTaGGAGCAGCAAGCCCCGGGCCCCCAGACCCATGGCTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LGIVQHLDHLILVLP*EQQAPGPQTHGCLV
Trigger: CACAAGGCAGCCATGGGTCTGGGGGCCCGGGGCTTGCTGCTCTCACGGGAGAACGAGGATCAGGTGGTCAAGGTGCTGCACGATGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263383.8
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
CDS GCA 90 bp CTGAGGCCCCCTCACCAGTGTAGGCCAGGCCACAGGCCACGTTGCTaGCCAGAGAGGGCACCTGCTCCCGAGAAATCTGTGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LRPPHQCRPGHRPRC*PERAPAPEKSVSSQ
Trigger: CTGGCTGGACACAGATTTCTCGGGAGCAGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTGGCCTGGCCTACACTGGTGAGGGGGCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp TCGCTGAGGCCCCCTCACCAGTGTAGGCCAGGCCACAGGCCACGTTaGTGCCCAGAGAGGGCACCTGCTCCCGAGAAATCTGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLRPPHQCRPGHRPR*CPERAPAPEKSVSS
Trigger: GCTGGACACAGATTTCTCGGGAGCAGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTGGCCTGGCCTACACTGGTGAGGGGGCCTCAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 90 bp GGGGAAATGTGCCCACCGACCAGCGTGAAGATGAACCGCACACCATaGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATGCCGGACG +
Preference number: 5 (lower is better)
Translates to: GEMCPPTSVKMNRTP*ALSTAATFSPPCRT
Trigger: CGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCCATGGTGTGCGGTTCATCTTCACGCTGGTCGGTGGGCACATTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS CCA 90 bp TACCTGGGGTGCCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGGTaGGCACAATGTCCCGCACCCTCCGCACAGACACACAAAACTTAC +
Preference number: 5 (lower is better)
Translates to: YLGCPTGRQPSRPSG*AQCPAPSAQTHKTY
Trigger: GTAAGTTTTGTGTGTCTGTGCGGAGGGTGCGGGACATTGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS-3UTR CAA 90 bp TGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCGCCCGGGTGGCCCACTaGGCTCAGCGGCGCCCCGTA +
Preference number: 5 (lower is better)
Translates to: CGVTGPHGIGPGQAMMRLARVAH*AQRRPV
Trigger: TACGGGGCGCCGCTGAGCCAAGTGGGCCACCCGGGC...GAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS TCA 90 bp GGGACTGAGCCATCTGAGCATTCTTCACCGCAGTCACCGTGTTGGTaGGGCCAGGGCCTGCTGTCACTGCCGCCACGCCCACCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: GTEPSEHSSPQSPCW*GQGLLSLPPRPPSL
Trigger: AAGGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACCAACACGGTGACTGCGGTGAAGAATGCTCAGATGGCTCAGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS GCA 90 bp TGGCCAGGGGCACAACGCACGCAGAGCAGATGGCAGGGAGCCATCTaGTGTGACTCCTCCCTGCCCTCCAGTATCCTTGCAGAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WPGAQRTQSRWQGAI*CDSSLPSSILAEPG
Trigger: GCCAGGCTCTGCAAGGATACTGGAGGGCAGGGAGGAGTCACAGCAGATGGCTCCCTGCCATCTGCTCTGCGTGCGTTGTGCCCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 90 bp AATAAGCTCCCAGCGGGGGCGGCGGCCGCGGGGGTCTCCATGAGGTaGTACCTAAGAGAGAAAGGGCACTTCCCAGACTTGGGCGCGACA +
Preference number: 5 (lower is better)
Translates to: NKLPAGAAAAGVSMR*YLREKGHFPDLGAT
Trigger: TGTCGCGCCCAAGTCTGGGAAGTGCCCTTTCTCTCTTAGGTACCACCTCATGGAGACCCCCGCGGCCGCCGCCCCCGCTGGGAGCTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS-3UTR CAA 90 bp CCTAACAGCCCCCGTGCCATCCCTCCAAGGAAGCAGGGAACACCCAAGGTCTCCATGTGGAGGGGGTGGTaGCGGCCTAACAGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: PNSPRAIPPRKQGTPKVSMWRGW*RPNSPR
Trigger: ACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACAT...GGAGACCTTGGGTGTTCCCTGCTTCCTTGGAGGGATGGCACGGGGGCTGTTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS TCA 90 bp AGGGGCACAACGCACGCAGAGCAGATGGCAGGGAGCCATCTGCTGTaGCTCCTCCCTGCCCTCCAGTATCCTTGCAGAGCCTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RGTTHAEQMAGSHLL*LLPALQYPCRAWQL
Trigger: CAGCTGCCAGGCTCTGCAAGGATACTGGAGGGCAGGGAGGAGTCACAGCAGATGGCTCCCTGCCATCTGCTCTGCGTGCGTTGTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp ACACGGATGCCCAGTTTCTCACAGGCCACCAGCAGCGGGGAAATGTaGCCACCGACCAGCGTGAAGATGAACCGCACACCATGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: TRMPSFSQATSSGEM*PPTSVKMNRTPWAL
Trigger: GAGGGCCCATGGTGTGCGGTTCATCTTCACGCTGGTCGGTGGGCACATTTCCCCGCTGCTGGTGGCCTGTGAGAAACTGGGCATCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS GCA 90 bp GGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATGCCGGACGCTTaGCTTGTCCACCTGGGCCCAAGGACAGGTGGAGCAATAAAGTTA +
Preference number: 5 (lower is better)
Translates to: GPQHSGHVLSAMPDA*LVHLGPRTGGAIKL
Trigger: TAACTTTATTGCTCCACCTGTCCTTGGGCCCAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp GTAGGGGTACAGCACGTCAACGGGCAGCTCCACAAACACCGGACCTaGAGGGACAGGGAGGACGCTGAGTCCATAACATGTCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: VGVQHVNGQLHKHRT*RDREDAESITCPQP
Trigger: GGGCTGGGGACATGTTATGGACTCAGCGTCCTCCCTGTCCCTGCAGGTCCGGTGTTTGTGGAGCTGCCCGTTGACGTGCTGTACCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 90 bp GACAGGCGGGCCATAGCATCAGCAGCAAAGACGGCCGTGACCTCATaGCGTGTGTCCACCACACGGATGCCCAGTTTCTCACAGGCCACC +
Preference number: 5 (lower is better)
Translates to: DRRAIASAAKTAVTS*RVSTTRMPSFSQAT
Trigger: GGTGGCCTGTGAGAAACTGGGCATCCGTGTGGTGGACACACGCCATGAGGTCACGGCCGTCTTTGCTGCTGATGCTATGGCCCGCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS-3UTR CAA 90 bp CCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGACGGCAGCCCGAAGCTaGTCGGCAGACGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: PRASNDETPNQLDTVQGQTAARS*SADVGV
Trigger: CACCCCAACGTCTGCCGACAAGCTTCGGGCTGCCGT...CTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS CCA 90 bp CGTCCCCAAACAGGCACCAGACCTCAGCATCTGGCCGGCACAGCTTaGCCCCAAGTGCAAATCCTGCACCAACTCCCAGAGTCCCAAAGG +
Preference number: 5 (lower is better)
Translates to: RPQTGTRPQHLAGTA*PQVQILHQLPESQR
Trigger: CCTTTGGGACTCTGGGAGTTGGTGCAGGATTTGCACTTGGGGCCAAGCTGTGCCGGCCAGATGCTGAGGTCTGGTGCCTGTTTGGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
ENST00000596093.1
CDS CCA 90 bp TGCGAGTGCCCCGGCAGCGGCAGCTTCCGTGTTCTCTCTTACCAGTaGCAAAGTCCAGGCCTCCATACACAGCGTGGCAATGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: CECPGSGSFRVLSYQ*QSPGLHTQRGNGDR
Trigger: CCTGTCTCCATTGCCACGCTGTGTATGGAGGCCTGGACTTTGCCACTGGTAAGAGAGAACACGGAAGCTGCCGCTGCCGGGGCACTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS-3UTR CAA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACCATCAGAGGCCTCTaGGCCCGGCTCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: REGTNGTVGSVKRRVQELTIRGL*ARLRIS
Trigger: GGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGT...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp GAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATCCCCACGGCAGCCCGAAGCTaGTCGGCAGACGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: EGPRAHKRASLRFDPSIPTAARS*SADVGV
Trigger: CACCCCAACGTCTGCCGACAAGCTTCGGGCTGCCGT...GGGGATGGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp GGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGAATGTGGAGGGGGTGGTaGCGGCCTAACAGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: GCGVTGPHGIGPGQAMMRMWRGW*RPNSPR
Trigger: ACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACAT...TCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCCCCTCCTCAGGGAGGTaGTGGAGTCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: REGTNGTVGSVKRRVQELPSSGR*WSHWAS
Trigger: TGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGG...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS GCA 90 bp CTGCCTTGTGATAATCAGTGTAGGCCAGGCCACAGGCCACGTTGCTaGCCAGAGAGGGCACCTGCTCCCGAGAAATCTGTGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LPCDNQCRPGHRPRC*PERAPAPEKSVSSQ
Trigger: CTGGCTGGACACAGATTTCTCGGGAGCAGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTGGCCTGGCCTACACTGATTATCACAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263383.8
ENST00000534378.5
ENST00000534806.1
CDS CCA 90 bp AAAGTCCAGGCCTCCATACACAGCGTGGCAATGGAGACAGGGCCCTaGACAGAACCTCTTACCAGTCCCTCTGGACTAGTCGGGGCTCGC +
Preference number: 5 (lower is better)
Translates to: KVQASIHSVAMETGP*TEPLTSPSGLVGAR
Trigger: GCGAGCCCCGACTAGTCCAGAGGGACTGGTAAGAGGTTCTGTCCAGGGCCCTGTCTCCATTGCCACGCTGTGTATGGAGGCCTGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS-3UTR CAA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGACCATCAGAGGCCTCTaGGCCCGGCTCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: WASWDRPRASNDETPNQLTIRGL*ARLRIS
Trigger: GGAGATCCTGAGCCGGGCCAAGAGGCCTCTGATGGT...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp GAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCATGTGGAGGGGGTGGTaGCGGCCTAACAGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: EEEGPRAHKRASLRFDPSMWRGW*RPNSPR
Trigger: ACGGGGGCTGTTAGGCCGCAACCACCCCCTCCACAT...GGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp GGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCCTCCCAATGAGGATGTaGACCACAACCGGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GTVGSVKRRVQELTREPLLPMRM*TTTGWP
Trigger: CGGCCACCCGGTTGTGGTCAACATCCTCATTGGGAG...GAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp TGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGTGCCGGACGCTTGCCTaGTCCACCTTCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: WASWDRPRASNDETPNQLCRTLA*STFTSR
Trigger: CCTGGAGGTGAAGGTGGACAAGGCAAGCGTCCGGCA...CAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534378.5
CDS GCA 90 bp TCCACCACCAGAATTGAGTTGTCAGGTAGCGTTTCCTCCACCAGCTaGAGCACCTGCACTGGGTTCAGGTGCTGGGCCACAGGCATCGCT +
Preference number: 5 (lower is better)
Translates to: STTRIELSGSVSSTS*STCTGFRCWATGIA
Trigger: AGCGATGCCTGTGGCCCAGCACCTGAACCCAGTGCAGGTGCTGCAGCTGGTGGAGGAAACGCTACCTGACAACTCAATTCTGGTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000525880.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
ENST00000596093.1
CDS-3UTR CAA 90 bp GAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCTCTCTGAGATTTGACCCCTCCTGCCGGACGCTTGCCTaGTCCACCTTGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EEEGPRAHKRASLRFDPSCRTLA*STLCSS
Trigger: GCTGCTGCACAAGGTGGACAAGGCAAGCGTCCGGCA...GGAGGGGTCAAATCTCAGAGAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CAA 90 bp AATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCAGGAAGGCAGCCAACGCCATGCCGGACGCTaGCCTTGTCCACCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: NDETPNQLDTVQGQEGSQRHAGR*PCPPCA
Trigger: TGCACAAGGTGGACAAGGCAAGCGTCCGGCATGGCG...TTGGCTGCCTTCCTGCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS-3UTR CAA 90 bp CACACAGTTCCTGCTAGGACAATGACATCCGCCTTCTTCAGGGCCGCACTGCGGCACCCAGAAGCAGGATaGGGGACTGAGCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: HTVPARTMTSAFFRAALRHPEAG*GTEPSE
Trigger: CTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGTG...CCGCAGTGCGGCCCTGAAGAAGGCGGATGTCATTGTCCTAGCAGGAACTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CAA 90 bp ACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACAAGAGAGCCCTCCTCAGGGAGGTaGTGGAGTCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TNGTVGSVKRRVQELTREPSSGR*WSHWAS
Trigger: TGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGG...CTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCGCCATGCCGGACGCTaGCCTTGTCCACCTTCACCT +
Preference number: 5 (lower is better)
Translates to: LWSHWASWDRPRASNDETRHAGR*PCPPSP
Trigger: AGGTGAAGGTGGACAAGGCAAGCGTCCGGCATGGCG...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534378.5
CDS CCA 90 bp CTCTTACCAGTGGCAAAGTCCAGGCCTCCATACACAGCGTGGCAATaGAGACAGGGCCCTGGACAGAACCTCTTACCAGTCCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LLPVAKSRPPYTAWQ*RQGPGQNLLPVPLD
Trigger: GTCCAGAGGGACTGGTAAGAGGTTCTGTCCAGGGCCCTGTCTCCATTGCCACGCTGTGTATGGAGGCCTGGACTTTGCCACTGGTAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS-3UTR CAA 90 bp CCCAGGCTCCTGCAAAGAGGTTGGCCAGGTAATTCTCTAAATACCAGGAGACCAACGGCAGCCCGAAGCTaGTCGGCAGACGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: PRLLQRGWPGNSLNTRRPTAARS*SADVGV
Trigger: CACCCCAACGTCTGCCGACAAGCTTCGGGCTGCCGT...TGGTCTCCTGGTATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CAA 90 bp ATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGCTCCCAATGAGGATGTaGACCACAACCGGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: IGPGQAMMRLQTSWTQSRLPMRM*TTTGWP
Trigger: CGGCCACCCGGTTGTGGTCAACATCCTCATTGGGAG...CCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS GCA 90 bp TCTGTCCTGAGGGCAGTGGGCAGTGTGGGAGGGAACGTGATCACATaGACGTTTTCAAGCCTCCCTCTGTGTCCACCCCACCATTTGTTC +
Preference number: 5 (lower is better)
Translates to: SVLRAVGSVGGNVIT*TFSSLPLCPPHHLF
Trigger: GAACAAATGGTGGGGTGGACACAGAGGGAGGCTTGAAAACGTGCATGTGATCACGTTCCCTCCCACACTGCCCACTGCCCTCAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp CCGGCCTGCCGTCCATGGCTGCTGAGTGGACCTTCCCAACACAGATaGAACGGTGCTACTTCTCTGCTTAATACAAGAGTGTCCTGTCGC +
Preference number: 5 (lower is better)
Translates to: PACRPWLLSGPSQHR*NGATSLLNTRVSCR
Trigger: GCGACAGGACACTCTTGTATTAAGCAGAGAAGTAGCACCGTTGCATCTGTGTTGGGAAGGTCCACTCAGCAGCCATGGACGGCAGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp GAAGAGATTAAGTCGGATAGTGGCAAGGACTCAGCCCACCGCACATaGAGCCAGCCCAGGAGAGGAACACAAGCCCAGCTGGGACTGAAA +
Preference number: 5 (lower is better)
Translates to: EEIKSDSGKDSAHRT*SQPRRGTQAQLGLK
Trigger: TTTCAGTCCCAGCTGGGCTTGTGTTCCTCTCCTGGGCTGGCTGCATGTGCGGTGGGCTGAGTCCTTGCCACTATCCGACTTAATCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS-3UTR CAA 90 bp ATCCCCTCCTCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGCATCCACCACCAGAATaGAGTTGTCAGGTAGCGTTT +
Preference number: 5 (lower is better)
Translates to: IPSSGRLWSHWASWDRPRHPPPE*SCQVAF
Trigger: AAACGCTACCTGACAACTCAATTCTGGTGGTGGATG...CCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGAGGAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp TTCAGTCTCCATAAGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGCACCCAGAAGCAGGATaGGGGACTGAGCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: FSLHKRGDKRHSWVREEEHPEAG*GTEPSE
Trigger: CTCAGATGGCTCAGTCCCCAATCCTGCTTCTGGGTG...CTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCTTATGGAGACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp AGAGTGGCCGGAAAAGGGACAGCTGATCAACAGCCTGGAGCGCACCCCGGTTCTCAGAAGATGTCTGAGTaGAGCAACATCTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: RVAGKGTADQQPGAHPGSQKMSE*SNISSR
Trigger: TCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTG...AGAACCGGGGTGCGCTCCAGGCTGTTGATCAGCTGTCCCTTTTCCGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS-3UTR CAA 90 bp TCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATACCACCAGAATTGAGTaGTCAGGTAGCGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGRLWSHWASWDRPRASNTTRIE*SGSVSS
Trigger: GGAGGAAACGCTACCTGACAACTCAATTCTGGTGGT...ATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp GGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGGGCCATCCACCACCAGAATaGAGTTGTCAGGTAGCGTTT +
Preference number: 5 (lower is better)
Translates to: GPGQAMMRLQTSWTQSRGHPPPE*SCQVAF
Trigger: AAACGCTACCTGACAACTCAATTCTGGTGGTGGATG...GCCCCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS GCA 90 bp GAAAGTTCAATAGAACCCACGCTCTTAAGTGCCCCACTGTTACACTaGCTGTCTCCAGGATGGCAGGGCAATCAGGGAGAGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: ESSIEPTLLSAPLLH*LSPGWQGNQGERRG
Trigger: CCCTCTCCTCTCTCCCTGATTGCCCTGCCATCCTGGAGACAGGCAGTGTAACAGTGGGGCACTTAAGAGCGTGGGTTCTATTGAACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 90 bp AGAAATCTGTGTCCAGCCAGCATCATTCCCTACCAAGGCCATCACTaGGATCTACAGGAAGATGATGAAGGCAGGCCGCAGCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RNLCPASIIPYQGHH*DLQEDDEGRPQPSA
Trigger: GGCTGAAGGCTGCGGCCTGCCTTCATCATCTTCCTGTAGATCCCAGTGATGGCCTTGGTAGGGAATGATGCTGGCTGGACACAGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524779.5
ENST00000533086.5
CDS-3UTR CAA 90 bp GAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCACACAGAAGATGTCTGAGTaGAGCAACATCTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: EGTNGTVGSVKRRVQELTQKMSE*SNISSR
Trigger: TCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTG...TGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp TCAGGGAGGTTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGCCATCACTGGGATCTaGTGTCTGACGAATGTATCA +
Preference number: 5 (lower is better)
Translates to: SGRLWSHWASWDRPRASNAITGI*CLTNVS
Trigger: TGATACATTCGTCAGACACAAGATCCCAGTGATGGC...ATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAACCTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp AGAGAGGGGACAAACGGCACAGTTGGGTCCGTGAAGAGGAGGGTCCAAGAGCTCGCCATCACTGGGATCTaGTGTCTGACGAATGTATCA +
Preference number: 5 (lower is better)
Translates to: REGTNGTVGSVKRRVQELAITGI*CLTNVS
Trigger: TGATACATTCGTCAGACACAAGATCCCAGTGATGGC...GAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTGCCGTTTGTCCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp ATAGGCCCAGGGCAAGCAATGATGAGACTCCAAACCAGCTGGACACAGTCCAGGACCACCAGAATTGAGTaGTCAGGTAGCGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: IGPGQAMMRLQTSWTQSRTTRIE*SGSVSS
Trigger: GGAGGAAACGCTACCTGACAACTCAATTCTGGTGGT...CCTGGACTGTGTCCAGCTGGTTTGGAGTCTCATCATTGCTTGCCCTGGGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS TCA 90 bp AAGGGGCTCACCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTaGGTTGAGCAACATCTCTTCCCGATTACGATTGACGATGATGAT +
Preference number: 5 (lower is better)
Translates to: KGLTLHSLLGLPEDV*VEQHLFPITIDDDD
Trigger: ATCATCATCGTCAATCGTAATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGTGAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS TCA 90 bp TCACCACCCCATTTTTCAAATGATCAAATGGAGGCTCTGAGAAGGTaGGGCTCTGCCGCTGTTCATCTCCAGTTCAGGCCTCCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SPPHFSNDQMEALRR*GSAAVHLQFRPPRF
Trigger: GAAGCGAGGAGGCCTGAACTGGAGATGAACAGCGGCAGAGCCTCACCTTCTCAGAGCCTCCATTTGATCATTTGAAAAATGGGGTGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS-3UTR CAA 90 bp GGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTCCAATCTTCCCGATTACGATaGACGATGATGATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GVTGPHGIGPGQAMMRLQSSRLR*TMMILL
Trigger: CAGCAAGATCATCATCGTCAATCGTAATCGGGAAGA...TTGGAGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS CCA 90 bp GAAGCATTCATCAGTTTGAGAGCCAACTATTTGTCTCTGGTTGACTaGCTACCCCTAGGGCAAGGTCTGGGCCTCAATCACTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: EAFISLRANYLSLVD*LPLGQGLGLNHCTR
Trigger: CCTGGTACAGTGATTGAGGCCCAGACCTTGCCCTAGGGGTAGCCAGTCAACCAGAGACAAATAGTTGGCTCTCAAACTGATGAATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS-3UTR CAA 90 bp TTGTGGAGTCACTGGGCCTCATGGGATAGGCCCAGGGCAAGCAATGATGAGACTTCTTCCCGATTACGATaGACGATGATGATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LWSHWASWDRPRASNDETSSRLR*TMMILL
Trigger: CAGCAAGATCATCATCGTCAATCGTAATCGGGAAGA...AGTCTCATCATTGCTTGCCCTGGGCCTATCCCATGAGGCCCAGTGACTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000534378.5
CDS-3UTR CAA 90 bp GGGCCTACATGGGCCAGAGGTGGTTTATTCAGTCTCCATAAGAGAGGGGACAAACAGAAGATGTCTGAGTaGAGCAACATCTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: GPTWARGGLFSLHKRGDKQKMSE*SNISSR
Trigger: TCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTG...TTTGTCCCCTCTCTTATGGAGACTGAATAAACCACCTCTGGCCCATGTAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS TCA 90 bp GAAAGAAGCATTCATCAGTTTGAGAGCCAACTATTTGTCTCTGGTTaGCTGGCTACCCCTAGGGCAAGGTCTGGGCCTCAATCACTGTAC +
Preference number: 5 (lower is better)
Translates to: ERSIHQFESQLFVSG*LATPRARSGPQSLY
Trigger: GTACAGTGATTGAGGCCCAGACCTTGCCCTAGGGGTAGCCAGTCAACCAGAGACAAATAGTTGGCTCTCAAACTGATGAATGCTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS TCA 90 bp TGTATCTTTCACCACCCCATTTTTCAAATGATCAAATGGAGGCTCTaGGAAGGTGAGGCTCTGCCGCTGTTCATCTCCAGTTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: CIFHHPIFQMIKWRL*EGEALPLFISSSGL
Trigger: GAGGCCTGAACTGGAGATGAACAGCGGCAGAGCCTCACCTTCTCAGAGCCTCCATTTGATCATTTGAAAAATGGGGTGGTGAAAGATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 90 bp GGTGCTACTTCTCTGCTTAATACAAGAGTGTCCTGTCGCCTAGGCTaGAGGGGAGTCAACATCCTCAGAATGATGAACCAAGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: GATSLLNTRVSCRLG*RGVNILRMMNQVQV
Trigger: GACTTGAACTTGGTTCATCATTCTGAGGATGTTGACTCCCCTGCAGCCTAGGCGACAGGACACTCTTGTATTAAGCAGAGAAGTAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS-3UTR CAA 90 bp CCCAGGCTCCTGCAAAGAGGTTGGCCAGGTAATTCTCTAAATACCAGGAGACCATCTTCCCGATTACGATaGACGATGATGATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PRLLQRGWPGNSLNTRRPSSRLR*TMMILL
Trigger: CAGCAAGATCATCATCGTCAATCGTAATCGGGAAGA...TGGTCTCCTGGTATTTAGAGAATTACCTGGCCAACCTCTTTGCAGGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS GCA 90 bp TCCTCTTGTCATTACATCCCTCTTACAGCTGAGGACATCAAGGCTTaGCCAAGTAAGACTGAAAGTTCAATAGAACCCACGCTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: SSCHYIPLTAEDIKA*PSKTESSIEPTLLS
Trigger: ACTTAAGAGCGTGGGTTCTATTGAACTTTCAGTCTTACTTGGGCAAGCCTTGATGTCCTCAGCTGTAAGAGGGATGTAATGACAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp GCCCCCTCCGTGTCACGTGACCCGGGAGCGTGGCCGTaGCCGGGTGGCCCACTTGGCTCAGCGGCGCCCCGT +
Preference number: 6 (lower is better)
Translates to: APSVSRDPGAWP*PGGPLGSAAPR
Trigger: ACGGGGCGCCGCTGAGCCAAGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCACGTGACACGGAGGGGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000531635.1
CDS CAA 72 bp GTGACCCGGGAGCGTGGCCGTGCCCGGGTGGCCCACTaGGCTCAGCGGCGCCCCGTAGTCCGGCCCGATGCG +
Preference number: 6 (lower is better)
Translates to: VTRERGRARVAH*AQRRPVVRPDA
Trigger: CGCATCGGGCCGGACTACGGGGCGCCGCTGAGCCAAGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263383.8
CDS CCA 72 bp AATTCGGCCCCCTCCGTGTCACGTGACCCGGGAGCGTaGCCGTGCCCGGGTGGCCCACTTGGCTCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: NSAPSVSRDPGA*PCPGGPLGSAA
Trigger: CGCCGCTGAGCCAAGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCACGTGACACGGAGGGGGCCGAATT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000531635.1
CDS TCA 72 bp CTGCCTCCAGCAGAATTCGGCCCCCTCCGTGTCACGTaGCCCGGGAGCGTGGCCGTGCCCGGGTGGCCCACT +
Preference number: 6 (lower is better)
Translates to: LPPAEFGPLRVT*PGSVAVPGWPT
Trigger: AGTGGGCCACCCGGGCACGGCCACGCTCCCGGGTCACGTGACACGGAGGGGGCCGAATTCTGCTGGAGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263383.8
ENST00000531635.1
CDS TCA 72 bp CACGCCTCTCCCTTAAAGAGCGCACGGGCCCGAGCCTaGTCCCCGACCCCGGGCCAGGCTGGGTCGAGGTCA +
Preference number: 6 (lower is better)
Translates to: HASPLKSARARA*SPTPGQAGSRS
Trigger: TGACCTCGACCCAGCCTGGCCCGGGGTCGGGGATCAGGCTCGGGCCCGTGCGCTCTTTAAGGGAGAGGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533148.5
ENST00000533747.1
CDS CAA 72 bp CGCCCCTTCTCGCAGCAGGATCCAGGGCCACGACCCTaGCCGCCAGTTTCTGTGCGGCCACGCCCCCAACCC +
Preference number: 6 (lower is better)
Translates to: RPFSQQDPGPRP*PPVSVRPRPQP
Trigger: GGGTTGGGGGCGTGGCCGCACAGAAACTGGCGGCAAGGGTCGTGGCCCTGGATCCTGCTGCGAGAAGGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS GCA 72 bp CTTCACCGCAGTCACCGTGTTGGTGAGGCCAGGGCCTaGTGTCACTGCCGCCACGCCCACCGTCCCGGACAG +
Preference number: 6 (lower is better)
Translates to: LHRSHRVGEARA*CHCRHAHRPGQ
Trigger: CTGTCCGGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACCAACACGGTGACTGCGGTGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS GCA 72 bp TTGCCGCCAGTTTCTGTGCGGCCACGCCCCCAACCCTaGCAGACCACGCCCTTTGTGCGCCTAGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: LPPVSVRPRPQP*QTTPFVRLGSG
Trigger: CCCCGAGCCTAGGCGCACAAAGGGCGTGGTCTGGCAGGGTTGGGGGCGTGGCCGCACAGAAACTGGCGGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS GCA 72 bp GCCCCTTCTCGCAGCAGGATCCAGGGCCACGACCCTTaGCGCCAGTTTCTGTGCGGCCACGCCCCCAACCCT +
Preference number: 6 (lower is better)
Translates to: APSRSRIQGHDP*RQFLCGHAPNP
Trigger: AGGGTTGGGGGCGTGGCCGCACAGAAACTGGCGGCAAGGGTCGTGGCCCTGGATCCTGCTGCGAGAAGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS GCA 72 bp CACTGCTCAGCATCACCATCCTCCACCTACCTGGGGTaGCCGACTGGGCGGCAGCCATCGCGGCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: HCSASPSSTYLG*PTGRQPSRPSG
Trigger: CCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTAGGTGGAGGATGGTGATGCTGAGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 72 bp AGCATCACCATCCTCCACCTACCTGGGGTGCCCGACTaGGCGGCAGCCATCGCGGCCCTCAGGGTGGGCACA +
Preference number: 6 (lower is better)
Translates to: SITILHLPGVPD*AAAIAALRVGT
Trigger: TGTGCCCACCCTGAGGGCCGCGATGGCTGCCGCCCAGTCGGGCACCCCAGGTAGGTGGAGGATGGTGATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp CTTCACCGCAGTCACCGTGTTGGTGAGGCCAGGGCCTaGTGTCACTGCCGCCACGCCCACCGTCCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LHRSHRVGEARA*CHCRHAHRPLC
Trigger: GCACAAGGGACGGTGGGCGTGGCGGCAGTGACAGCAGGCCCTGGCCTCACCAACACGGTGACTGCGGTGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533148.5
CDS GCA 72 bp TGGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCCACCTGGGCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: WALSTAATFSPP*RTLALSTWAQG
Trigger: TCCTTGGGCCCAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CAA 72 bp GCACAGCGGCCACGTTCTCTCCGCCATGCCGGACGCTaGCCTTGTCCACCTGGGCCCAAGGACAGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: AQRPRSLRHAGR*PCPPGPKDRWS
Trigger: GCTCCACCTGTCCTTGGGCCCAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CAA 90 bp AAGAAATCGCGCCCCTTCTCGCAGCAGGATCCAGGGCCACGACCCTaGCCGCCAGTTTCTGTGCGGCCACGCCCCCAACCCTGCCAGACC +
Preference number: 6 (lower is better)
Translates to: KKSRPFSQQDPGPRP*PPVSVRPRPQPCQT
Trigger: GGTCTGGCAGGGTTGGGGGCGTGGCCGCACAGAAACTGGCGGCAAGGGTCGTGGCCCTGGATCCTGCTGCGAGAAGGGGCGCGATTTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS GCA 72 bp TGGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCCACCTTGTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: WALSTAATFSPP*RTLALSTLCSS
Trigger: GCTGCTGCACAAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000533747.1
CDS GCA 72 bp GGTGGGTGTGAAGGCGTCCTGATGGATGGTGCCCACTaGCCCAGGCGGGGGCCCTTCCTTACCAGGATCGAG +
Preference number: 6 (lower is better)
Translates to: GGCEGVLMDGAH*PRRGPFLTRIE
Trigger: CTCGATCCTGGTAAGGAAGGGCCCCCGCCTGGGGCAGTGGGCACCATCCATCAGGACGCCTTCACACCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525880.5
ENST00000534806.1
CDS GCA 72 bp TGGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCCACCTTCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: WALSTAATFSPP*RTLALSTFTSR
Trigger: CCTGGAGGTGAAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534378.5
CDS CCA 72 bp CCAGCGGGGGCGGCGGCCGCGGGGGTCTCCATGAGGTaGTACCTAAGAGAGAAAGGGCACTTCCCAGACTTG +
Preference number: 6 (lower is better)
Translates to: PAGAAAAGVSMR*YLREKGHFPDL
Trigger: CAAGTCTGGGAAGTGCCCTTTCTCTCTTAGGTACCACCTCATGGAGACCCCCGCGGCCGCCGCCCCCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527093.5
CDS GCA 72 bp GGCATCGCTGCCTTCTCCCGAAAGGTCTGCTCCTTCTaGCGGTCGGCTTCCCGCAGCTCCTCCACCCAGTCT +
Preference number: 6 (lower is better)
Translates to: GIAAFSRKVCSF*RSASRSSSTQS
Trigger: AGACTGGGTGGAGGAGCTGCGGGAAGCCGACCGGCAGAAGGAGCAGACCTTTCGGGAGAAGGCAGCGATGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000525880.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
ENST00000596093.1
ENST00000598709.1
CDS GCA 72 bp TGGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATaGCGGACGCTTGCCTTGTCCACCTCCAGGATATGG +
Preference number: 6 (lower is better)
Translates to: WALSTAATFSPP*RTLALSTSRIW
Trigger: CCATATCCTGGAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531635.1
CDS TCA 72 bp CACTGCTGCTGGGCATCGTGCAGCACCTTGACCACCTaGTCCTCGTTCTCCCGTGAGAGCAGCAAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: HCCWASCSTLTT*SSFSRESSKPR
Trigger: CCGGGGCTTGCTGCTCTCACGGGAGAACGAGGATCAGGTGGTCAAGGTGCTGCACGATGCCCAGCAGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263383.8
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
CDS TCA 72 bp CACCCAGCCCCCTTCCGGCCTGCCGTCCATGGCTGCTaGGTGGACCTTCCCAACACAGATGCAACGGTGCTA +
Preference number: 6 (lower is better)
Translates to: HPAPFRPAVHGC*VDLPNTDATVL
Trigger: TAGCACCGTTGCATCTGTGTTGGGAAGGTCCACTCAGCAGCCATGGACGGCAGGCCGGAAGGGGGCTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp TCCTCCACCAGCTGCAGCACCTGCACTGGGTTCAGGTaGTGGGCCACAGGCATCGCTGCCTTCTCCCGAAAG +
Preference number: 6 (lower is better)
Translates to: SSTSCSTCTGFR*WATGIAAFSRK
Trigger: CTTTCGGGAGAAGGCAGCGATGCCTGTGGCCCAGCACCTGAACCCAGTGCAGGTGCTGCAGCTGGTGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000525880.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
ENST00000596093.1
CDS GCA 72 bp CGGACGCTTGCCTTGTCCACCTCCAGGATATGGCGCTaGCTCCAGCAGAATTCGGCCCCCTCCGTGTCACGT +
Preference number: 6 (lower is better)
Translates to: RTLALSTSRIWR*LQQNSAPSVSR
Trigger: ACGTGACACGGAGGGGGCCGAATTCTGCTGGAGGCAGCGCCATATCCTGGAGGTGGACAAGGCAAGCGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531635.1
CDS CCA 72 bp CGGACGCTTGCCTTGTCCACCTTCACCTCCAGGATATaGCGCTGCCTCCAGCAGAATTCGGCCCCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: RTLALSTFTSRI*RCLQQNSAPSV
Trigger: CACGGAGGGGGCCGAATTCTGCTGGAGGCAGCGCCATATCCTGGAGGTGAAGGTGGACAAGGCAAGCGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534378.5
CDS CAA 72 bp GAGCCATCGCGGAAGTCCGTCCTCCCAATGAGGATGTaGACCACAACCGGGTGGCCGTCTCGGCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: EPSRKSVLPMRM*TTTGWPSRHCC
Trigger: GCAGCAGTGCCGAGACGGCCACCCGGTTGTGGTCAACATCCTCATTGGGAGGACGGACTTCCGCGATGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263383.8
ENST00000533086.5
ENST00000534378.5
CDS CAA 90 bp GGGCCCTCAGCACAGCGGCCACGTTCTCTCCGCCATGCCGGACGCTaGCCTTGTCCACCTGGGCCCAAGGACAGGTGGAGCAATAAAGTT +
Preference number: 6 (lower is better)
Translates to: GPSAQRPRSLRHAGR*PCPPGPKDRWSNKV
Trigger: AACTTTATTGCTCCACCTGTCCTTGGGCCCAGGTGGACAAGGCAAGCGTCCGGCATGGCGGAGAGAACGTGGCCGCTGTGCTGAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CAA 90 bp ACAGCAATGGAGCCATCGCGGAAGTCCGTCCTCCCAATGAGGATGTaGACCACAACCGGGTGGCCGTCTCGGCACTGCTGCTGGGCATCG +
Preference number: 6 (lower is better)
Translates to: TAMEPSRKSVLPMRM*TTTGWPSRHCCWAS
Trigger: CGATGCCCAGCAGCAGTGCCGAGACGGCCACCCGGTTGTGGTCAACATCCTCATTGGGAGGACGGACTTCCGCGATGGCTCCATTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263383.8
ENST00000533086.5
ENST00000534378.5
CDS CCA 72 bp GGCCAGGCTGGGTCGAGGTCACATCGCATCAGGATGTaGTTCTCCCACACCAGCTCGACCCCCGACGCTATT +
Preference number: 6 (lower is better)
Translates to: GQAGSRSHRIRM*FSHTSSTPDAI
Trigger: AATAGCGTCGGGGGTCGAGCTGGTGTGGGAGAACCACATCCTGATGCGATGTGACCTCGACCCAGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533747.1
CDS CCA 72 bp CAGCCCCCTTCCGGCCTGCCGTCCATGGCTGCTGAGTaGACCTTCCCAACACAGATGCAACGGTGCTACTTC +
Preference number: 6 (lower is better)
Translates to: QPPSGLPSMAAE*TFPTQMQRCYF
Trigger: GAAGTAGCACCGTTGCATCTGTGTTGGGAAGGTCCACTCAGCAGCCATGGACGGCAGGCCGGAAGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp CCCAGTTTCTCACAGGCCACCAGCAGCGGGGAAATGTaGCCACCGACCAGCGTGAAGATGAACCGCACACCA +
Preference number: 6 (lower is better)
Translates to: PSFSQATSSGEM*PPTSVKMNRTP
Trigger: TGGTGTGCGGTTCATCTTCACGCTGGTCGGTGGGCACATTTCCCCGCTGCTGGTGGCCTGTGAGAAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS GCA 72 bp ATCTGGCCGGCACAGCTTGGCCCCAAGTGCAAATCCTaGACCAACTCCCAGAGTCCCAAAGGCCCCAGGATC +
Preference number: 6 (lower is better)
Translates to: IWPAQLGPKCKS*TNSQSPKGPRI
Trigger: GATCCTGGGGCCTTTGGGACTCTGGGAGTTGGTGCAGGATTTGCACTTGGGGCCAAGCTGTGCCGGCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000533086.5
ENST00000534378.5
ENST00000596093.1
CDS GCA 72 bp AGGCCACAGGCCACGTTGCTGCCCAGAGAGGGCACCTaGTCCCGAGAAATCTGTGTCCAGCCAGCATCATTC +
Preference number: 6 (lower is better)
Translates to: RPQATLLPREGT*SREICVQPASF
Trigger: GAATGATGCTGGCTGGACACAGATTTCTCGGGAGCAGGTGCCCTCTCTGGGCAGCAACGTGGCCTGTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
CDS GCA 72 bp CTTGCCTTGTCCACCTTCACCTCCAGGATATGGCGCTaGCTCCAGCAGAATTCGGCCCCCTCCGTGTCACGT +
Preference number: 6 (lower is better)
Translates to: LALSTFTSRIWR*LQQNSAPSVSR
Trigger: ACGTGACACGGAGGGGGCCGAATTCTGCTGGAGGCAGCGCCATATCCTGGAGGTGAAGGTGGACAAGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534378.5
CDS GCA 72 bp AAGTCGGATAGTGGCAAGGACTCAGCCCACCGCACATaGAGCCAGCCCAGGAGAGGAACACAAGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: KSDSGKDSAHRT*SQPRRGTQAQL
Trigger: CAGCTGGGCTTGTGTTCCTCTCCTGGGCTGGCTGCATGTGCGGTGGGCTGAGTCCTTGCCACTATCCGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp ACTGTCACTGCCACCCCCTCGCTGGAGCCTGCCCTCTaGCCCATTTATCCCATCCAGGTTAGGGAGCACAGA +
Preference number: 6 (lower is better)
Translates to: TVTATPSLEPAL*PIYPIQVREHR
Trigger: TCTGTGCTCCCTAACCTGGATGGGATAAATGGGGCAGAGGGCAGGCTCCAGCGAGGGGGTGGCAGTGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS CCA 72 bp ACAGGCACCAGACCTCAGCATCTGGCCGGCACAGCTTaGCCCCAAGTGCAAATCCTGCACCAACTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: TGTRPQHLAGTA*PQVQILHQLPE
Trigger: CTCTGGGAGTTGGTGCAGGATTTGCACTTGGGGCCAAGCTGTGCCGGCCAGATGCTGAGGTCTGGTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
ENST00000596093.1
CDS CCA 72 bp GCAAGTCTCCCAACTCCAGTGCCTCACCTCAGCATCTaGCCGGCACAGCTTGGCCCCAAGTGCAAATCCTGC +
Preference number: 6 (lower is better)
Translates to: ASLPTPVPHLSI*PAQLGPKCKSC
Trigger: GCAGGATTTGCACTTGGGGCCAAGCTGTGCCGGCCAGATGCTGAGGTGAGGCACTGGAGTTGGGAGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525880.5
CDS CCA 72 bp GACAGGGCCCTGGACAGAACCTCTTACCAGTCCCTCTaGACTAGTCGGGGCTCGCTTTCCCACCCTGCACAA +
Preference number: 6 (lower is better)
Translates to: DRALDRTSYQSL*TSRGSLSHPAQ
Trigger: TTGTGCAGGGTGGGAAAGCGAGCCCCGACTAGTCCAGAGGGACTGGTAAGAGGTTCTGTCCAGGGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS GCA 72 bp CAGCACGTCAACGGGCAGCTCCACAAACACCGGACCTaGAGGGACAGGGAGGACGCTGAGTCCATAACATGT +
Preference number: 6 (lower is better)
Translates to: QHVNGQLHKHRT*RDREDAESITC
Trigger: ACATGTTATGGACTCAGCGTCCTCCCTGTCCCTGCAGGTCCGGTGTTTGTGGAGCTGCCCGTTGACGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp AGGGCAGTGGGCAGTGTGGGAGGGAACGTGATCACATaGACGTTTTCAAGCCTCCCTCTGTGTCCACCCCAC +
Preference number: 6 (lower is better)
Translates to: RAVGSVGGNVIT*TFSSLPLCPPH
Trigger: GTGGGGTGGACACAGAGGGAGGCTTGAAAACGTGCATGTGATCACGTTCCCTCCCACACTGCCCACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 72 bp CCCGGCAGCGGCAGCTTCCGTGTTCTCTCTTACCAGTaGCAAAGTCCAGGCCTCCATACACAGCGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: PGSGSFRVLSYQ*QSPGLHTQRGN
Trigger: ATTGCCACGCTGTGTATGGAGGCCTGGACTTTGCCACTGGTAAGAGAGAACACGGAAGCTGCCGCTGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS CCA 72 bp GCCATAGCATCAGCAGCAAAGACGGCCGTGACCTCATaGCGTGTGTCCACCACACGGATGCCCAGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: AIASAAKTAVTS*RVSTTRMPSFS
Trigger: TGAGAAACTGGGCATCCGTGTGGTGGACACACGCCATGAGGTCACGGCCGTCTTTGCTGCTGATGCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000527093.5
ENST00000531635.1
ENST00000533086.5
ENST00000533747.1
ENST00000534378.5
ENST00000600984.5
CDS CCA 72 bp GCCTCCATACACAGCGTGGCAATGGAGACAGGGCCCTaGACAGAACCTCTTACCAGTCCCTCTGGACTAGTC +
Preference number: 6 (lower is better)
Translates to: ASIHSVAMETGP*TEPLTSPSGLV
Trigger: GACTAGTCCAGAGGGACTGGTAAGAGGTTCTGTCCAGGGCCCTGTCTCCATTGCCACGCTGTGTATGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS CCA 72 bp GTGGCAAAGTCCAGGCCTCCATACACAGCGTGGCAATaGAGACAGGGCCCTGGACAGAACCTCTTACCAGTC +
Preference number: 6 (lower is better)
Translates to: VAKSRPPYTAWQ*RQGPGQNLLPV
Trigger: GACTGGTAAGAGGTTCTGTCCAGGGCCCTGTCTCCATTGCCACGCTGTGTATGGAGGCCTGGACTTTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599324.1
CDS CAA 72 bp CAGTGCCCACGAAGTCCCCGCCATCCACCACCAGAATaGAGTTGTCAGGTAGCGTTTCCTCCACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: QCPRSPRHPPPE*SCQVAFPPPAA
Trigger: TGCAGCTGGTGGAGGAAACGCTACCTGACAACTCAATTCTGGTGGTGGATGGCGGGGACTTCGTGGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263383.8
ENST00000524779.5
ENST00000525880.5
ENST00000533086.5
ENST00000534378.5
ENST00000534806.1
ENST00000596093.1
CDS GCA 72 bp ATAGAACCCACGCTCTTAAGTGCCCCACTGTTACACTaGCTGTCTCCAGGATGGCAGGGCAATCAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: IEPTLLSAPLLH*LSPGWQGNQGE
Trigger: CTCTCCCTGATTGCCCTGCCATCCTGGAGACAGGCAGTGTAACAGTGGGGCACTTAAGAGCGTGGGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 72 bp TGTCCAGCCAGCATCATTCCCTACCAAGGCCATCACTaGGATCTACAGGAAGATGATGAAGGCAGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: CPASIIPYQGHH*DLQEDDEGRPQ
Trigger: CTGCGGCCTGCCTTCATCATCTTCCTGTAGATCCCAGTGATGGCCTTGGTAGGGAATGATGCTGGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524779.5
ENST00000533086.5
CDS CAA 72 bp CAGGCCCTAAGCTTCCCTCAGGCCAGCCCAGTCACCTaGTGTCTGACGAATGTATCAAATTCGATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: QALSFPQASPVT*CLTNVSNSMRL
Trigger: CAGCCTCATCGAATTTGATACATTCGTCAGACACAAGGTGACTGGGCTGGCCTGAGGGAAGCTTAGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524779.5
ENST00000533086.5
CDS TCA 72 bp ACCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTaGGTTGAGCAACATCTCTTCCCGATTACGATTGAC +
Preference number: 6 (lower is better)
Translates to: TLHSLLGLPEDV*VEQHLFPITID
Trigger: GTCAATCGTAATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CAA 90 bp GGCTCACCCTGCACAGCCTCCTGGGGCTTCCAGAAGATGTCTGAGTaGAGCAACATCTCTTCCCGATTACGATTGACGATGATGATCTTG +
Preference number: 6 (lower is better)
Translates to: GSPCTASWGFQKMSE*SNISSRLRLTMMIL
Trigger: CAAGATCATCATCGTCAATCGTAATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp CGTCCATGGCTGCTGAGTGGACCTTCCCAACACAGATaGAACGGTGCTACTTCTCTGCTTAATACAAGAGTG +
Preference number: 6 (lower is better)
Translates to: RPWLLSGPSQHR*NGATSLLNTRV
Trigger: CACTCTTGTATTAAGCAGAGAAGTAGCACCGTTGCATCTGTGTTGGGAAGGTCCACTCAGCAGCCATGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 72 bp ATCAGTTTGAGAGCCAACTATTTGTCTCTGGTTGACTaGCTACCCCTAGGGCAAGGTCTGGGCCTCAATCAC +
Preference number: 6 (lower is better)
Translates to: ISLRANYLSLVD*LPLGQGLGLNH
Trigger: GTGATTGAGGCCCAGACCTTGCCCTAGGGGTAGCCAGTCAACCAGAGACAAATAGTTGGCTCTCAAACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp TCTCTGCTTAATACAAGAGTGTCCTGTCGCCTAGGCTaGAGGGGAGTCAACATCCTCAGAATGATGAACCAA +
Preference number: 6 (lower is better)
Translates to: SLLNTRVSCRLG*RGVNILRMMNQ
Trigger: TTGGTTCATCATTCTGAGGATGTTGACTCCCCTGCAGCCTAGGCGACAGGACACTCTTGTATTAAGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS CCA 72 bp CAGGAGCAGGGTGAGAGGTCAAGAGAAGCTTGGTCTTaGTTAGGCATATATTATACTACATGCCAGGCTCAA +
Preference number: 6 (lower is better)
Translates to: QEQGERSREAWS*LGIYYTTCQAQ
Trigger: TTGAGCCTGGCATGTAGTATAATATATGCCTAACCAAGACCAAGCTTCTCTTGACCTCTCACCCTGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5
CDS GCA 72 bp CATTACATCCCTCTTACAGCTGAGGACATCAAGGCTTaGCCAAGTAAGACTGAAAGTTCAATAGAACCCACG +
Preference number: 6 (lower is better)
Translates to: HYIPLTAEDIKA*PSKTESSIEPT
Trigger: CGTGGGTTCTATTGAACTTTCAGTCTTACTTGGGCAAGCCTTGATGTCCTCAGCTGTAAGAGGGATGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533086.5