RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ILRUN (Homo sapiens)

Ensembl gene IDs: ENSG00000196821

Ensembl transcript IDs: ENST00000374021.1, ENST00000374023.8, ENST00000374026.7

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTCTCCCTGCCTGTCTCACACCCTCACCCACCACCCAGCTGGATaGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGA +
Preference number: 1 (lower is better)
Translates to: WSPCLSHTLTHHPAG*GCGNRQVTLQQHPG
Trigger: TCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCATCCAGCTGGGTGGTGGGTGAGGGTGTGAGACAGGCAGGGAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 90 bp GAAGCAAGAGGAAGAGCAAGACGACTCTGGCAGGCCCAGACCCACTaGCGGTGGCCCATGAAGCCCCTGCTGGGAAACTGGGAAGGGGCA +
Preference number: 1 (lower is better)
Translates to: EARGRARRLWQAQTH*RWPMKPLLGNWEGA
Trigger: TGCCCCTTCCCAGTTTCCCAGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTTGCTCTTCCTCTTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 90 bp CCTCCCTGGGCTGGGGAAGCCATGGACCCCTCTGCCTGCACTCCATaGCTTGCACTTACTCTGGCCCTCTGCAAGGAGCTCATCTCGCCT +
Preference number: 1 (lower is better)
Translates to: PPWAGEAMDPSACTP*LALTLALCKELISP
Trigger: AGGCGAGATGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCCAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp TGGGTTCAGACCCTATCACCTAACCATGGTGTCTGCCTCACCTCCTaGGTGCCAGACGCAGGTGGTCCTGCCCAGAGGTGGCCTGCCACT +
Preference number: 1 (lower is better)
Translates to: WVQTLSPNHGVCLTS*VPDAGGPAQRWPAT
Trigger: AGTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGGTGATAGGGTCTGAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 90 bp CCCTCACCCACCACCCAGCTGGATGGGGGTGTGGTAACAGGCAGGTaGCCCTGCAACAGCACCCTGGATCCATATCCCTGGCTCTCAAAC +
Preference number: 1 (lower is better)
Translates to: PSPTTQLDGGVVTGR*PCNSTLDPYPWLSN
Trigger: GTTTGAGAGCCAGGGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCATCCAGCTGGGTGGTGGGTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp CTGGGCTGGGGAAGCCATGGACCCCTCTGCCTGCACTCCATGACTTaGACTTACTCTGGCCCTCTGCAAGGAGCTCATCTCGCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: LGWGSHGPLCLHSMT*TYSGPLQGAHLASK
Trigger: CTTGGAGGCGAGATGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp CCATGGTGTCTGCCTCACCTCCTGGGTGCCAGACGCAGGTGGTCCTaGCCAGAGGTGGCCTGCCACTTGGTGAAGATTCTAAGAGGAGCA +
Preference number: 1 (lower is better)
Translates to: PWCLPHLLGARRRWS*PEVACHLVKILRGA
Trigger: TGCTCCTCTTAGAATCTTCACCAAGTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp TTCAGACCCTATCACCTAACCATGGTGTCTGCCTCACCTCCTGGGTaGCAGACGCAGGTGGTCCTGCCCAGAGGTGGCCTGCCACTTGGT +
Preference number: 1 (lower is better)
Translates to: FRPYHLTMVSASPPG*QTQVVLPRGGLPLG
Trigger: ACCAAGTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGGTGATAGGGTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp TGTCTCCCCAACTGGGTTCAGACCCTATCACCTAACCATGGTGTCTaGCTCACCTCCTGGGTGCCAGACGCAGGTGGTCCTGCCCAGAGG +
Preference number: 1 (lower is better)
Translates to: CLPNWVQTLSPNHGV*LTSWVPDAGGPAQR
Trigger: CCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGGTGATAGGGTCTGAACCCAGTTGGGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp CAGCTGGGCATGCATGGGCTCCAGGGAGGCAGTGTCTCAGGAGACTaGTACCAGCAGCAGCAGTCTGGGCCTAATGAGGCCCTCAGACAA +
Preference number: 1 (lower is better)
Translates to: QLGMHGLQGGSVSGD*YQQQQSGPNEALRQ
Trigger: TTGTCTGAGGGCCTCATTAGGCCCAGACTGCTGCTGCTGGTACCAGTCTCCTGAGACACTGCCTCCCTGGAGCCCATGCATGCCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 90 bp TCAACCTGCTCAGAATCTACAGGATGCCAGGGCAGGCCACCTGCCTaGGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: STCSESTGCQGRPPA*VSSQSISLLLQLGC
Trigger: GCAGCCCAGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCCTGGCATCCTGTAGATTCTGAGCAGGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 90 bp AGCAGCAGTCTGGGCCTAATGAGGCCCTCAGACAAAAAGCCATCCTaGGGCCTGTGGCGTGGGTACCTGGCAGAGACTTCCCTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: SSSLGLMRPSDKKPS*GLWRGYLAETSLCS
Trigger: AGAGCAGAGGGAAGTCTCTGCCAGGTACCCACGCCACAGGCCTCAGGATGGCTTTTTGTCTGAGGGCCTCATTAGGCCCAGACTGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp GCTGGGCTGCCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTaGCAGGGAGGCGGGGCTGTGGAGGTCCTCTCATTTCCATCTAAA +
Preference number: 1 (lower is better)
Translates to: AGLPLAHLPANNLAS*QGGGAVEVLSFPSK
Trigger: TTTAGATGGAAATGAGAGGACCTCCACAGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGGCAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp AACAGGCAGGCAGACCCTCACCCACACCCAGGCTATATGACTCCTTaGAGCCACTCATTACCTGGTCTCCCTGCCTGTCTCACACCCTCA +
Preference number: 1 (lower is better)
Translates to: NRQADPHPHPGYMTP*SHSLPGLPACLTPS
Trigger: TGAGGGTGTGAGACAGGCAGGGAGACCAGGTAATGAGTGGCTGCAAGGAGTCATATAGCCTGGGTGTGGGTGAGGGTCTGCCTGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp ATGATACTGATACCCTCCCTGGGCTGGGGAAGCCATGGACCCCTCTaGCTGCACTCCATGACTTGCACTTACTCTGGCCCTCTGCAAGGA +
Preference number: 1 (lower is better)
Translates to: MILIPSLGWGSHGPL*LHSMTCTYSGPLQG
Trigger: TCCTTGCAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCCAGGGAGGGTATCAGTATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp TCTAGTGAAGTCCCAGACCCAGCTGCACCACGCTTCTCAGCAGGCTaGCTCCAGCCACCCCCAGGGCTTCTCCAGTGGAATAAAGTTTAT +
Preference number: 1 (lower is better)
Translates to: SSEVPDPAAPRFSAG*LQPPPGLLQWNKVY
Trigger: ATAAACTTTATTCCACTGGAGAAGCCCTGGGGGTGGCTGGAGCCAGCCTGCTGAGAAGCGTGGTGCAGCTGGGTCTGGGACTTCACTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp TGGCGTGGGTACCTGGCAGAGACTTCCCTCTGCTCTGCTAGGGAGTaGAGCACTCCCATGTGCACAGAAAATAGGTGCTCCAGAGTAAGC +
Preference number: 1 (lower is better)
Translates to: WRGYLAETSLCSARE*STPMCTENRCSRVS
Trigger: GCTTACTCTGGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCAGAGGGAAGTCTCTGCCAGGTACCCACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp AGATGTGCTGCTTCAAGGCTACTAAGCAGTAAGAACAGCTGGGCATaGATGGGCTCCAGGGAGGCAGTGTCTCAGGAGACTGGTACCAGC +
Preference number: 1 (lower is better)
Translates to: RCAASRLLSSKNSWA*MGSREAVSQETGTS
Trigger: GCTGGTACCAGTCTCCTGAGACACTGCCTCCCTGGAGCCCATGCATGCCCAGCTGTTCTTACTGCTTAGTAGCCTTGAAGCAGCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp CAGTGGAGATGTGCTGCTTCAAGGCTACTAAGCAGTAAGAACAGCTaGGCATGCATGGGCTCCAGGGAGGCAGTGTCTCAGGAGACTGGT +
Preference number: 1 (lower is better)
Translates to: QWRCAASRLLSSKNS*ACMGSREAVSQETG
Trigger: ACCAGTCTCCTGAGACACTGCCTCCCTGGAGCCCATGCATGCCCAGCTGTTCTTACTGCTTAGTAGCCTTGAAGCAGCACATCTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp TTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTaGACACCTGCTGGTGAGTTGCACCAACACCCGTGTGTGCACATG +
Preference number: 1 (lower is better)
Translates to: LCDNREAWATFKLAY*TPAGELHQHPCVHM
Trigger: CATGTGCACACACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp TGCTCTGCTAGGGAGTGGAGCACTCCCATGTGCACAGAAAATAGGTaGTCCAGAGTAAGCTCTAGTGAAGTCCCAGACCCAGCTGCACCA +
Preference number: 1 (lower is better)
Translates to: CSAREWSTPMCTENR*SRVSSSEVPDPAAP
Trigger: TGGTGCAGCTGGGTCTGGGACTTCACTAGAGCTTACTCTGGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp GCAGAGACTTCCCTCTGCTCTGCTAGGGAGTGGAGCACTCCCATGTaGACAGAAAATAGGTGCTCCAGAGTAAGCTCTAGTGAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: AETSLCSAREWSTPM*TENRCSRVSSSEVP
Trigger: TGGGACTTCACTAGAGCTTACTCTGGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCAGAGGGAAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp TGCACACCTGCTGGTGAGTTGCACCAACACCCGTGTGTGCACATGTaGTGCATACATATAACCAGCACAGAGGCACTGTTCCCAGAGCAA +
Preference number: 1 (lower is better)
Translates to: CTPAGELHQHPCVHM*CIHITSTEALFPEQ
Trigger: TTGCTCTGGGAACAGTGCCTCTGTGCTGGTTATATGTATGCACCACATGTGCACACACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp ACACCTGCTGGTGAGTTGCACCAACACCCGTGTGTGCACATGTGGTaGATACATATAACCAGCACAGAGGCACTGTTCCCAGAGCAAATG +
Preference number: 1 (lower is better)
Translates to: TPAGELHQHPCVHMW*IHITSTEALFPEQM
Trigger: CATTTGCTCTGGGAACAGTGCCTCTGTGCTGGTTATATGTATGCACCACATGTGCACACACGGGTGTTGGTGCAACTCACCAGCAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp TTGGGAAGGGAGACAAGGTGCTTGGGACATTTAACTTGCCAAGTGTaGTTGCCTAGAAGCAAGAGGAAGAGCAAGACGACTCTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: LGRETRCLGHLTCQV*LPRSKRKSKTTLAG
Trigger: GCCTGCCAGAGTCGTCTTGCTCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp AATCAGCTTGCACTTCTGAGCCCTGGCAACCCTACCATCCTCTCCTaGTGGGCTCAGATTGAATTTGGGGAGGTATTTATTCTCATGCCC +
Preference number: 1 (lower is better)
Translates to: NQLALLSPGNPTILS*WAQIEFGEVFILMP
Trigger: GGGCATGAGAATAAATACCTCCCCAAATTCAATCTGAGCCCAGCAGGAGAGGATGGTAGGGTTGCCAGGGCTCAGAAGTGCAAGCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp ACTGAAGAGAAACAGGGAAAGGTGTTGTGTGACAACAGAGAAGCATaGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGTTG +
Preference number: 1 (lower is better)
Translates to: TEEKQGKVLCDNREA*ATFKLAYCTPAGEL
Trigger: CAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCTGTTTCTCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp CAGCTTGCACTTCTGAGCCCTGGCAACCCTACCATCCTCTCCTGCTaGGCTCAGATTGAATTTGGGGAGGTATTTATTCTCATGCCCATT +
Preference number: 1 (lower is better)
Translates to: QLALLSPGNPTILSC*AQIEFGEVFILMPI
Trigger: AATGGGCATGAGAATAAATACCTCCCCAAATTCAATCTGAGCCCAGCAGGAGAGGATGGTAGGGTTGCCAGGGCTCAGAAGTGCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp GGGCAGATGTACTCCTGTAGCACTGATCCGCAGAGTCCTCAAACATaGCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAGCACTA +
Preference number: 1 (lower is better)
Translates to: GQMYSCSTDPQSPQT*HANFSPESLPEQAL
Trigger: TAGTGCTTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGCTACAGGAGTACATCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp GGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGGGACATTTAACTTaGCAAGTGTGGTTGCCTAGAAGCAAGAGGAAGAGCAAGACGACT +
Preference number: 1 (lower is better)
Translates to: GLFLGRETRCLGHLT*QVWLPRSKRKSKTT
Trigger: AGTCGTCTTGCTCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 90 bp AAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTaGTTGGGACATTTAACTTGCCAAGTGTGGTTGCCTAGAAGCAAG +
Preference number: 1 (lower is better)
Translates to: KDVHRNGLFLGRETR*LGHLTCQVWLPRSK
Trigger: CTTGCTTCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 90 bp GGACTTTGCATATTCTTGTATCTTTGGCAGACAGCTGTTCTAGCCTaGTTCAAGCTTCCCATGGAGATATCCACATCTCAACCTGCTCAG +
Preference number: 1 (lower is better)
Translates to: GLCIFLYLWQTAVLA*FKLPMEISTSQPAQ
Trigger: CTGAGCAGGTTGAGATGTGGATATCTCCATGGGAAGCTTGAACCAGGCTAGAACAGCTGTCTGCCAAAGATACAAGAATATGCAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGGCCACCTGCCTGAGTaGGCAGCCAGTCAATCAGCC +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAGHLPE*AASQSA
Trigger: GGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGGAAAGCAGGGGTTGTaGAGCCTCCCACAATCCTGC +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAGKQGL*SLPQSC
Trigger: GCAGGATTGTGGGAGGCTTCACAACCCCTGCTTTCC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp CCTGGGCTGGGGAAGCCATGGACCCCTCTGCCTGCACTCCATGACTaGCACTTACTCTGGCCCTCTGCAAGGAGCTCATCTCGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: PGLGKPWTPLPALHD*HLLWPSARSSSRLQ
Trigger: TTGGAGGCGAGATGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp CTGGGTGCCAGACGCAGGTGGTCCTGCCCAGAGGTGGCCTGCCACTaGGTGAAGATTCTAAGAGGAGCAGGGACTATTGGGGCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LGARRRWSCPEVACH*VKILRGAGTIGAER
Trigger: CCTCTCAGCCCCAATAGTCCCTGCTCCTCTTAGAATCTTCACCAAGTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAGCCTCCCACAATCCTaGCAGGGACAGTGGAGATGT +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPASLPQS*QGQWRC
Trigger: ACATCTCCACTGTCCCTGGCAGGATTGTGGGAGGCT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTCAAGGCTTCCTCTGCTaGCCACACAGGGAAGTTTGG +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAQGFLC*PHREVW
Trigger: CCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTG...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTCCTGCAACAGCACCCTaGATCCATATCCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAPATAP*IHIPGS
Trigger: AGAGCCAGGGATATGGATCCAGGGTGCTGTTGCAGG...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAGCAGTAAGAACAGCTaGGCATGCATGGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPASSKNS*ACMGSR
Trigger: CCTGGAGCCCATGCATGCCCAGCTGTTCTTACTGCT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTGGCCACCTTCAAGCTTaGCTACTGCACACCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GQATCLSEQPVNQPLASAGHLQA*LLHTCW
Trigger: CCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCC...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAGTCAATCAGCCTCTTaGTTCAGCTGGGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPASQSAS*FSWAAT
Trigger: AGTGGCAGCCCAGCTGAAGCAAGAGGCTGATTGACT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGACAACAGAGAAGCATaGGCCACCTTCAAGCTTGCC +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPADNREA*ATFKLA
Trigger: GGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCGCCTCTTGCTTCAGCTaGGCTGCCACTTGCCCACCT +
Preference number: 2 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISASCFS*AATCPP
Trigger: AGGTGGGCAAGTGGCAGCCCAGCTGAAGCAAGAGGC...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTCTGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT +
Preference number: 2 (lower is better)
Translates to: PLAHLPANNLASWQGGGALCDVV*NPEEPL
Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACAG...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTAATAATCTAGCATCCTaGCAGGGAGGCGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GQATCLSEQPVNQPLASANNLAS*QGGGAV
Trigger: CACAGCCCCGCCTCCCTGCCAGGATGCTAGATTATT...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGGGCTGGGGAAGCCATaGACCCCTCTGCCTGCACTC +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSGLGKP*TPLPAL
Trigger: GAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGGCAGGCCACCTGCCTaGGTGAGCAGCCAGTCAATC +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSGRPPA*VSSQSI
Trigger: GATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGGCTATATGACTCCTTaGAGCCACTCATTACCTGGT +
Preference number: 2 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAGYMTP*SHSLPG
Trigger: ACCAGGTAATGAGTGGCTGCAAGGAGTCATATAGCC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGCCTCACCTCCTGGGTaGCAGACGCAGGTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMASPPG*QTQVVL
Trigger: CAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTCAGGCCCAGACCCACTaGCGGTGGCCCATGAAGCCC +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLQAQTH*RWPMKP
Trigger: GGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTG...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCTGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT +
Preference number: 2 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISLCDVV*NPEEPL
Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACAG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGAGACGCAGGTGGTCCTaGCCAGAGGTGGCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRRRRWS*PEVACH
Trigger: GTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCGCCAACTTTTCACCTaGATCTCTTCCAGAACAAGC +
Preference number: 2 (lower is better)
Translates to: GQATCLSEQPVNQPLASARQLFT*ISSRTS
Trigger: GCTTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGACTGACGGTGGCCCATaGAGCCCCTGCTGGGAAACT +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMTDGGP*SPCWET
Trigger: AGTTTCCCAGCAGGGGCTTCATGGGCCACCGTCAGT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp GAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTaGCCTACTGCACACCTGCTGGTGAGTTGCACCAACACCCGTGTG +
Preference number: 2 (lower is better)
Translates to: ERCCVTTEKHGPPSS*PTAHLLVSCTNTRV
Trigger: CACACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTATATCAGAGGACAACTaGAGAGAAACAGGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: PLAHLPANNLASWQGGGAISEDN*RETGKG
Trigger: ACCTTTCCCTGTTTCTCTTCAGTTGTCCTCTGATAT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGGTGGTAACAGGCAGGTaGCCCTGCAACAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRVVTGR*PCNSTL
Trigger: CAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCAC...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTACACCAGCTGTTTGGTaGGGTTCTCTCCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSTPAVW*GSLQAG
Trigger: TCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGAGTCCCAGACCCAGCTaGACCACGCTTCTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRSPRPS*TTLLSR
Trigger: CCTGCTGAGAAGCGTGGTGCAGCTGGGTCTGGGACT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGCCATTAAAAACAAATaGGGTCAGAGACTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: PLAHLPANNLASWQGGGAAIKNK*GQRLLE
Trigger: CTCCAGAAGTCTCTGACCCCATTTGTTTTTAATGGC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGACAAATTCCCCCTTTaGGGCTGTATTTTCATACCT +
Preference number: 2 (lower is better)
Translates to: PLAHLPANNLASWQGGGADKFPL*GCIFIP
Trigger: AGGTATGAAAATACAGCCCCAAAGGGGGAATTTGTC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTGTGGCGTGGGTACCTaGCAGAGACTTCCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMCGVGT*QRLPSA
Trigger: AGCAGAGGGAAGTCTCTGCCAGGTACCCACGCCACA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAAGTCCCAGACCCAGCTaGACCACGCTTCTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQSPRPS*TTLLSR
Trigger: CCTGCTGAGAAGCGTGGTGCAGCTGGGTCTGGGACT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGGCAGAGACTTCCCTCTaGTCTGCTAGGGAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRAETSL*SAREWS
Trigger: GCTCCACTCCCTAGCAGAGCAGAGGGAAGTCTCTGC...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGCCTCCCACAATCCTaGCAGGGACAGTGGAGATGT +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSLPQS*QGQWRC
Trigger: ACATCTCCACTGTCCCTGGCAGGATTGTGGGAGGCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTCTGCACTCCATGACTTaGACTTACTCTGGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSLHSMT*TYSGPL
Trigger: CAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAG...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGGGGCCCTAGGCATTaGTCTGAACCCATACCAGTG +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRGPRH*SEPIPV
Trigger: CACTGGTATGGGTTCAGAGCAATGCCTAGGGCCCCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTGCCATTAAAAACAAATaGGGTCAGAGACTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: GQATCLSEQPVNQPLASAAIKNK*GQRLLE
Trigger: CTCCAGAAGTCTCTGACCCCATTTGTTTTTAATGGC...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGCAAGGCTTCCTCTGCTaGCCACACAGGGAAGTTTGG +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMQGFLC*PHREVW
Trigger: CCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTG...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGCCTCTTGCTTCAGCTaGGCTGCCACTTGCCCACCT +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLASCFS*AATCPP
Trigger: AGGTGGGCAAGTGGCAGCCCAGCTGAAGCAAGAGGC...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGCAGTAAGAACAGCTaGGCATGCATGGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSSKNS*ACMGSR
Trigger: CCTGGAGCCCATGCATGCCCAGCTGTTCTTACTGCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGACTTGCACTTACTCTaGCCCTCTGCAAGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSDLHLL*PSARSS
Trigger: TGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp CGAGATCTATCCTCAAGGCTTCCTCTGCTGGCCACACAGGGAAGTTaGGTCTTCAGAGAGGTTCTGATGCTAACAAGCCACAGGGTTGAC +
Preference number: 2 (lower is better)
Translates to: RDLSSRLPLLATQGS*VFREVLMLTSHRVD
Trigger: GTCAACCCTGTGGCTTGTTAGCATCAGAACCTCTCTGAAGACCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTGAGGATAGATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp CCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTaGATGGGCTTAAGGTTACAGCCAGTCCTTATGGGGGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PHQLFGEVLSRLEVT*MGLRLQPVLMGERR
Trigger: CCTTCTCTCCCCCATAAGGACTGGCTGTAACCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCAGAGTCCTCAAACATaGCACGCCAACTTTTCACCT +
Preference number: 2 (lower is better)
Translates to: NREAWATFKLAYCTPAGEQSPQT*HANFSP
Trigger: AGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTCACCTGCTGGTGAGTTaGACCAACACCCGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLHLLVS*TNTRVC
Trigger: GCACACACGGGTGTTGGTGCAACTCACCAGCAGGTG...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGATCAAGTAGTCAGTaGCTGGCCCTTCCCCATGAC +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRSSSQ*LALPHD
Trigger: GTCATGGGGAAGGGCCAGCCACTGACTACTTGATCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCAGCCACTCATTACCTaGTCTCCCTGCCTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRQPLIT*SPCLSH
Trigger: GTGAGACAGGCAGGGAGACCAGGTAATGAGTGGCTG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGTGCTCTGCTAGGGAGTaGAGCACTCCCATGTGCACA +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRCSARE*STPMCT
Trigger: TGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCA...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTCGCCAACTTTTCACCTaGATCTCTTCCAGAACAAGC +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSRQLFT*ISSRTS
Trigger: GCTTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCG...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTTCACTCCATGCACACTaGCAGATTCTTCCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSSLHAH*QILPKS
Trigger: AGACTTGGGAAGAATCTGTCAGTGTGCATGGAGTGA...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTATTGTTACAAGGGTGTaGAGAAGGACACCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSIVTRV*RRTPLR
Trigger: CCTGAGAGGTGTCCTTCTGCACACCCTTGTAACAAT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTGGAGCACTCCCATGTaGACAGAAAATAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMWSTPM*TENRCS
Trigger: GGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAATGCTCTGCTAGGGAGTaGAGCACTCCCATGTGCACA +
Preference number: 2 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQCSARE*STPMCT
Trigger: TGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCA...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp CTGCAAGGAGCTCATCTCGCCTCCAAGGATGTGCACAGAAATGGTTaGTTCTTGGGAAGGGAGACAAGGTGCTTGGGACATTTAACTTGC +
Preference number: 2 (lower is better)
Translates to: LQGAHLASKDVHRNG*FLGRETRCLGHLTC
Trigger: GCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGATGAGCTCCTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTAGTCTCAGAAGAGGATaGGGAGGAACAAACAACACA +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSSLRRG*GGTNNT
Trigger: TGTGTTGTTTGTTCCTCCTCATCCTCTTCTGAGACT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTGGGGGAGAGAAGGCTaGCTGCTTCTTGTAGAAAAA +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMWGREG*LLLVEK
Trigger: TTTTTCTACAAGAAGCAGTCAGCCTTCTCTCCCCCA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGTTCAAGCTTGCCTACTaGACACCTGCTGGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRFKLAY*TPAGEL
Trigger: CAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAA...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGACACACCTCACTCCATaGACACTGACAGATTCTTCC +
Preference number: 2 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMTHLTP*TLTDSS
Trigger: GGAAGAATCTGTCAGTGTGCATGGAGTGAGGTGTGT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTAGGTATTTATTCTCATaGCCATTTCCCACCATGGCC +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSRYLFS*PFPTMA
Trigger: GGCCATGGTGGGAAATGGGCATGAGAATAAATACCT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTAGTGTCTCAGGAGACTaGTACCAGCAGCAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLSVSGD*YQQQQS
Trigger: AGACTGCTGCTGCTGGTACCAGTCTCCTGAGACACT...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTTTAACTTGCCAAGTGTaGTTGCCTAGAAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSLTCQV*LPRSKR
Trigger: CCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAA...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGGATGTGCACAGAAATaGTTTGTTCTTGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSGCAQK*FVLGKG
Trigger: TCCCTTCCCAAGAACAAACCATTTCTGTGCACATCC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTTTCAAGCTTGCCTACTaGACACCTGCTGGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLFKLAY*TPAGEL
Trigger: CAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAA...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTTGCACAGAAAATAGGTaGTCCAGAGTAAGCTCTAGT +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSCTENR*SRVSSS
Trigger: ACTAGAGCTTACTCTGGAGCACCTATTTTCTGTGCA...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTTGGAGCACTCCCATGTaGACAGAAAATAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLWSTPM*TENRCS
Trigger: GGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCA...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCTTGCCAAGTGTGGTTaGCTAGAAGCAAGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRLAKCG*LEARGR
Trigger: TCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTTTGGGACATTTAACTTaGCAAGTGTGGTTGCCTAGA +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSLGHLT*QVWLPR
Trigger: TCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAA...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 90 bp GATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTaGGGACATTTAACTTGCCAAGTGTGGTTGCCTAGAAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: DVHRNGLFLGRETRC*GHLTCQVWLPRSKR
Trigger: CCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGTCAACACCATTCCTGTaGTTCAGCATTCACACATGC +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRSTPFL*FSIHTC
Trigger: GCATGTGTGAATGCTGAATCACAGGAATGGTGTTGA...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAATGGGAAGCCACTGCATaGAGAATCCAAAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQWEATA*RIQKSS
Trigger: ACTGCTCTTTTGGATTCTTCATGCAGTGGCTTCCCA...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAATGGGAAGCCACTGCATaGAGAATCCAAAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEWEATA*RIQKSS
Trigger: ACTGCTCTTTTGGATTCTTCATGCAGTGGCTTCCCA...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTCAGAGTCCTCAAACATaGCACGCCAACTTTTCACCT +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLQSPQT*HANFSP
Trigger: AGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTACAGTGGAGATGTGCTaGTTCAAGGCTACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLTVEMC*FKATKQ
Trigger: CTGCTTAGTAGCCTTGAAGCAGCACATCTCCACTGT...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGTCGCCTCCAAGGATGTaGACAGAAATGGTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRSPPRM*TEMVCS
Trigger: AGAACAAACCATTTCTGTGCACATCCTTGGAGGCGA...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTATATTCTTGTATCTTTaGCAGACAGCTGTTCTAGCC +
Preference number: 2 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSIFLYL*QTAVLA
Trigger: GGCTAGAACAGCTGTCTGCCAAAGATACAAGAATAT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGAACAAGCCACAGGGTTaGCGAATACAAATGTCAAAG +
Preference number: 2 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRNKPQG*RIQMSK
Trigger: CTTTGACATTTGTATTCGTCAACCCTGTGGCTTGTT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAAGTCTCAGAAGAGGATaGGGAGGAACAAACAACACA +
Preference number: 2 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQSLRRG*GGTNNT
Trigger: TGTGTTGTTTGTTCCTCCTCATCCTCTTCTGAGACT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTTCAAGCTTCCCATaGAGATATCCACATCTCAAC +
Preference number: 2 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQGSSFP*RYPHLN
Trigger: GTTGAGATGTGGATATCTCCATGGGAAGCTTGAACC...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTCTGGATCCATATCCCTaGCTCTCAAACCAACTAAGA +
Preference number: 2 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLLDPYP*LSNQLR
Trigger: TCTTAGTTGGTTTGAGAGCCAGGGATATGGATCCAG...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR TCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAATCAACACCATTCCTGTaGTTCAGCATTCACACATGC +
Preference number: 2 (lower is better)
Translates to: QSPQTCHANFSPESLPEQSTPFL*FSIHTC
Trigger: GCATGTGTGAATGCTGAATCACAGGAATGGTGTTGA...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTCAGTCAATCAGCCTCTaGCTTCAGCTGGGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAQSISL*LQLGCH
Trigger: GTGGCAGCCCAGCTGAAGCAAGAGGCTGATTGACTG...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp GGCCTGTGGCGTGGGTACCTGGCAGAGACTTCCCTCTaGTCTGCTAGGGAGTGGAGCACTCCCATGTGCACA +
Preference number: 3 (lower is better)
Translates to: GLWRGYLAETSL*SAREWSTPMCT
Trigger: TGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCAGAGGGAAGTCTCTGCCAGGTACCCACGCCACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp CTGCCTCACCTCCTGGGTGCCAGACGCAGGTGGTCCTaGCCAGAGGTGGCCTGCCACTTGGTGAAGATTCTA +
Preference number: 3 (lower is better)
Translates to: LPHLLGARRRWS*PEVACHLVKIL
Trigger: TAGAATCTTCACCAAGTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp TATCACCTAACCATGGTGTCTGCCTCACCTCCTGGGTaGCAGACGCAGGTGGTCCTGCCCAGAGGTGGCCTG +
Preference number: 3 (lower is better)
Translates to: YHLTMVSASPPG*QTQVVLPRGGL
Trigger: CAGGCCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGGTGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp TGCCTGTCTCACACCCTCACCCACCACCCAGCTGGATaGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAG +
Preference number: 3 (lower is better)
Translates to: CLSHTLTHHPAG*GCGNRQVTLQQ
Trigger: CTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCATCCAGCTGGGTGGTGGGTGAGGGTGTGAGACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp ACCCTATCACCTAACCATGGTGTCTGCCTCACCTCCTaGGTGCCAGACGCAGGTGGTCCTGCCCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: TLSPNHGVCLTS*VPDAGGPAQRW
Trigger: CCACCTCTGGGCAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGGTGATAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 72 bp ACCACCCAGCTGGATGGGGGTGTGGTAACAGGCAGGTaGCCCTGCAACAGCACCCTGGATCCATATCCCTGG +
Preference number: 3 (lower is better)
Translates to: TTQLDGGVVTGR*PCNSTLDPYPW
Trigger: CCAGGGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCATCCAGCTGGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 72 bp GCTGGGGAAGCCATGGACCCCTCTGCCTGCACTCCATaGCTTGCACTTACTCTGGCCCTCTGCAAGGAGCTC +
Preference number: 3 (lower is better)
Translates to: AGEAMDPSACTP*LALTLALCKEL
Trigger: GAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp ATGCATGGGCTCCAGGGAGGCAGTGTCTCAGGAGACTaGTACCAGCAGCAGCAGTCTGGGCCTAATGAGGCC +
Preference number: 3 (lower is better)
Translates to: MHGLQGGSVSGD*YQQQQSGPNEA
Trigger: GGCCTCATTAGGCCCAGACTGCTGCTGCTGGTACCAGTCTCCTGAGACACTGCCTCCCTGGAGCCCATGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp GGAAGCCATGGACCCCTCTGCCTGCACTCCATGACTTaGACTTACTCTGGCCCTCTGCAAGGAGCTCATCTC +
Preference number: 3 (lower is better)
Translates to: GSHGPLCLHSMT*TYSGPLQGAHL
Trigger: GAGATGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp AACTGGGTTCAGACCCTATCACCTAACCATGGTGTCTaGCTCACCTCCTGGGTGCCAGACGCAGGTGGTCCT +
Preference number: 3 (lower is better)
Translates to: NWVQTLSPNHGV*LTSWVPDAGGP
Trigger: AGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGGTGATAGGGTCTGAACCCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 72 bp CACCATGGCCACCCTCAGGCCACACCAGCTGTTTGGTaGGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGG +
Preference number: 3 (lower is better)
Translates to: HHGHPQATPAVW*GSLQAGSNFDG
Trigger: CCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCTGAGGGTGGCCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp CCCACGTCACCCGAGATCTATCCTCAAGGCTTCCTCTaGTGGCCACACAGGGAAGTTTGGTCTTCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: PTSPEIYPQGFL*WPHREVWSSER
Trigger: CCTCTCTGAAGACCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTGAGGATAGATCTCGGGTGACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGGCCACCTTCAAGCTaGCCTACTGCACACCTGCTG +
Preference number: 3 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMGPPSS*PTAHLL
Trigger: CAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGAGGAGCAGGGACTATaGGGGCTGAGAGGTAGCCAC +
Preference number: 3 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMEEQGL*GLRGSH
Trigger: GTGGCTACCTCTCAGCCCCAATAGTCCCTGCTCCTC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp CCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGTTaGACCAACACCCGTGTGTGCACATGTGGTGCATAC +
Preference number: 3 (lower is better)
Translates to: PSSLPTAHLLVS*TNTRVCTCGAY
Trigger: GTATGCACCACATGTGCACACACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTaGACACCTGCTGGTGAGTTGCACCAACACCCGTGT +
Preference number: 3 (lower is better)
Translates to: NREAWATFKLAY*TPAGELHQHPC
Trigger: ACACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp ACACACCACTGTCCAGGTGGGAAGGGCAGCCACTGCTaGTCCTGCATTCACCCAAGGAAACAAAGGAAAGGT +
Preference number: 3 (lower is better)
Translates to: THHCPGGKGSHC*SCIHPRKQRKG
Trigger: ACCTTTCCTTTGTTTCCTTGGGTGAATGCAGGAGCAGCAGTGGCTGCCCTTCCCACCTGGACAGTGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp TGTGCTGCTTCAAGGCTACTAAGCAGTAAGAACAGCTaGGCATGCATGGGCTCCAGGGAGGCAGTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: CAASRLLSSKNS*ACMGSREAVSQ
Trigger: CTGAGACACTGCCTCCCTGGAGCCCATGCATGCCCAGCTGTTCTTACTGCTTAGTAGCCTTGAAGCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR TCA 72 bp CTCACTCCATGCACACTGACAGATTCTTCCCAAGTCTaGACCCCTCTGTCTCCCCAACTGGGTTCAGACCCT +
Preference number: 3 (lower is better)
Translates to: LTPCTLTDSSQV*TPLSPQLGSDP
Trigger: AGGGTCTGAACCCAGTTGGGGAGACAGAGGGGTTCAGACTTGGGAAGAATCTGTCAGTGTGCATGGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp ACGTCACCCGAGATCTATCCTCAAGGCTTCCTCTGCTaGCCACACAGGGAAGTTTGGTCTTCAGAGAGGTTC +
Preference number: 3 (lower is better)
Translates to: TSPEIYPQGFLC*PHREVWSSERF
Trigger: GAACCTCTCTGAAGACCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTGAGGATAGATCTCGGGTGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAGGGCCACCTTCAAGCTaGCCTACTGCACACCTGCTG +
Preference number: 3 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEGPPSS*PTAHLL
Trigger: CAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCC...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp TCCCTCTGCTCTGCTAGGGAGTGGAGCACTCCCATGTaGACAGAAAATAGGTGCTCCAGAGTAAGCTCTAGT +
Preference number: 3 (lower is better)
Translates to: SLCSAREWSTPM*TENRCSRVSSS
Trigger: ACTAGAGCTTACTCTGGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp AGGAGCTCATCTCGCCTCCAAGGATGTGCACAGAAATaGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGGG +
Preference number: 3 (lower is better)
Translates to: RSSSRLQGCAQK*FVLGKGDKVLG
Trigger: CCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGATGAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp ATTCTTCCCAAGTCTGAACCCCTCTGTCTCCCCAACTaGGTTCAGACCCTATCACCTAACCATGGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: ILPKSEPLCLPN*VQTLSPNHGVC
Trigger: GCAGACACCATGGTTAGGTGATAGGGTCTGAACCCAGTTGGGGAGACAGAGGGGTTCAGACTTGGGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTACACCTGCTGGTGAGTaGCACCAACACCCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLTPAGE*HQHPCV
Trigger: CACACACGGGTGTTGGTGCAACTCACCAGCAGGTGT...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGGAGGTGGCCTGCCACTaGGTGAAGATTCTAAGAGGA +
Preference number: 3 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLREVACH*VKILRG
Trigger: TCCTCTTAGAATCTTCACCAAGTGGCAGGCCACCTC...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp GCACTTCTGAGCCCTGGCAACCCTACCATCCTCTCCTaGTGGGCTCAGATTGAATTTGGGGAGGTATTTATT +
Preference number: 3 (lower is better)
Translates to: ALLSPGNPTILS*WAQIEFGEVFI
Trigger: AATAAATACCTCCCCAAATTCAATCTGAGCCCAGCAGGAGAGGATGGTAGGGTTGCCAGGGCTCAGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp AAACAGGGAAAGGTGTTGTGTGACAACAGAGAAGCATaGGCCACCTTCAAGCTTGCCTACTGCACACCTGCT +
Preference number: 3 (lower is better)
Translates to: KQGKVLCDNREA*ATFKLAYCTPA
Trigger: AGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGCCACACAGGGAAGTTaGGTCTTCAGAGAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQATQGS*VFREVL
Trigger: CAGAACCTCTCTGAAGACCAAACTTCCCTGTGTGGC...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGCCACACAGGGAAGTTaGGTCTTCAGAGAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLATQGS*VFREVL
Trigger: CAGAACCTCTCTGAAGACCAAACTTCCCTGTGTGGC...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp TTGGGAAGGGAGACAAGGTGCTTGGGACATTTAACTTaGCAAGTGTGGTTGCCTAGAAGCAAGAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: LGRETRCLGHLT*QVWLPRSKRKS
Trigger: GCTCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp TACTCCTGTAGCACTGATCCGCAGAGTCCTCAAACATaGCACGCCAACTTTTCACCTGAATCTCTTCCAGAA +
Preference number: 3 (lower is better)
Translates to: YSCSTDPQSPQT*HANFSPESLPE
Trigger: TTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGCTACAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CCA 72 bp GAGACAAGGTGCTTGGGACATTTAACTTGCCAAGTGTaGTTGCCTAGAAGCAAGAGGAAGAGCAAGACGACT +
Preference number: 3 (lower is better)
Translates to: ETRCLGHLTCQV*LPRSKRKSKTT
Trigger: AGTCGTCTTGCTCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAACAACACACATTTTTaGGAACTCAGACACCCAGAC +
Preference number: 3 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMNNTHF*ELRHPD
Trigger: GTCTGGGTGTCTGAGTTCCAAAAAATGTGTGTTGTT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAAGGGTGATAACTCATaGGCTGATGCCATTAAAAAC +
Preference number: 3 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMKGDNS*ADAIKN
Trigger: GTTTTTAATGGCATCAGCCAATGAGTTATCACCCTT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR GCA 72 bp CACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTaGTTGGGACATTTAACTTGCCAAGTGTGGTTGCCT +
Preference number: 3 (lower is better)
Translates to: HRNGLFLGRETR*LGHLTCQVWLP
Trigger: AGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR-3UTR CAA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAAAGGGTGATAACTCATaGGCTGATGCCATTAAAAAC +
Preference number: 3 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEKGDNS*ADAIKN
Trigger: GTTTTTAATGGCATCAGCCAATGAGTTATCACCCTT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGCGACCCCGCTCCTTTaGGGTAGGCCCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAATPLL*GRPRAS
Trigger: AGAGGCCCGGGGCCTACCTCAAAGGAGCGGGGTCGC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGGGCTGGGGAAGCCATaGACCCCTCTGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAGLGKP*TPLPAL
Trigger: GAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGGCAGGCCACCTGCCTaGGTGAGCAGCCAGTCAATC +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAGRPPA*VSSQSI
Trigger: GATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGTCTGCCTCACCTCCTaGGTGCCAGACGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAVCLTS*VPDAGG
Trigger: ACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGAC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGGCAGGCCACCTGCCTaGGTGAGCAGCCAGTCAATC +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGAGRPPA*VSSQSI
Trigger: GATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAGTCCCAGACCCAGCTaGACCACGCTTCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPASPRPS*TTLLSR
Trigger: CCTGCTGAGAAGCGTGGTGCAGCTGGGTCTGGGACT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCGCTTCTCAGCAGGCTaGCTCCAGCCACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISRFSAG*LQPPPG
Trigger: CCCTGGGGGTGGCTGGAGCCAGCCTGCTGAGAAGCG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGCCCATTTCCCACCATaGCCACCCTCAGGCCACACC +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGAAHFPP*PPSGHT
Trigger: GGTGTGGCCTGAGGGTGGCCATGGTGGGAAATGGGC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTCTGCACACCTGCTGGTaGGTTGCACCAACACCCGTG +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGALHTCW*VAPTPV
Trigger: CACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAG...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAGGCAGCTGAACTTCTaGATCAGCTCCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPARQLNF*ISSGSR
Trigger: CCTGGACCCGGAGCTGATGCAGAAGTTCAGCTGCCT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGGGAAGGGCAGCCACTaGTGCTCCTGCATTCACCCA +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGAGKGSH*CSCIHP
Trigger: TGGGTGAATGCAGGAGCAGCAGTGGCTGCCCTTCCC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCTGCACACCTGCTGGTaGGTTGCACCAACACCCGTG +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASALHTCW*VAPTPV
Trigger: CACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTTCTGCCTGCACTCCATaGCTTGCACTTACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPASACTP*LALTLA
Trigger: GGCCAGAGTAAGTGCAAGTCATGGAGTGCAGGCAGA...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTGGGGTAAACTCACTCTaGCACTCACTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAGVNSL*HSLTLP
Trigger: GGGGAGAGTGAGTGAGTGGCAGAGTGAGTTTACCCC...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374026.7
CDS-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAGGGGCCCTAGGCATTaGTCTGAACCCATACCAGTG +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPARGPRH*SEPIPV
Trigger: CACTGGTATGGGTTCAGAGCAATGCCTAGGGCCCCT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTGCCTCTTGCTTCAGCTaGGCTGCCACTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASAASCFS*AATCPP
Trigger: AGGTGGGCAAGTGGCAGCCCAGCTGAAGCAAGAGGC...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTAGCCATGGACCCCTCTaGCTGCACTCCATGACTTGC +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASASHGPL*LHSMTC
Trigger: GCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCT...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGAGACGCAGGTGGTCCTaGCCAGAGGTGGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGERRRWS*PEVACH
Trigger: GTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCT...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTTGGTCTTGCTCAGTTTaGTCAGGAGCAGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAWSCSV*SGAGAH
Trigger: ATGGGCTCCTGCTCCTGACCAAACTGAGCAAGACCA...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCACCACCCAGCTGGATaGGGGTGTGGTAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISHHPAG*GCGNRQ
Trigger: CTGCCTGTTACCACACCCCCATCCAGCTGGGTGGTG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTCAGCCACTCATTACCTaGTCTCCCTGCCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGAQPLIT*SPCLSH
Trigger: GTGAGACAGGCAGGGAGACCAGGTAATGAGTGGCTG...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTCTCTGTCTCCCCAACTaGGTTCAGACCCTATCACCT +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPALCLPN*VQTLSP
Trigger: AGGTGATAGGGTCTGAACCCAGTTGGGGAGACAGAG...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCACACCACTGTCCAGGTaGGAAGGGCAGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISTPLSR*EGQPLL
Trigger: CAGCAGTGGCTGCCCTTCCCACCTGGACAGTGGTGT...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGGGCCACCTGCCTGAGTaGGCAGCCAGTCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEGHLPE*AASQSA
Trigger: GGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCC...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCGACAAAAAGCCATCCTaGGGCCTGTGGCGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISDKKPS*GLWRGY
Trigger: GTACCCACGCCACAGGCCTCAGGATGGCTTTTTGTC...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGATTCTTCCCAAGTCTaGACCCCTCTGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGADSSQV*TPLSPQ
Trigger: TTGGGGAGACAGAGGGGTTCAGACTTGGGAAGAATC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTAGGGGCCCTAGGCATTaGTCTGAACCCATACCAGTG +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASARGPRH*SEPIPV
Trigger: CACTGGTATGGGTTCAGAGCAATGCCTAGGGCCCCT...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTACAGCTGTTCTAGCCTaGTTCAAGCTTCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPATAVLA*FKLPME
Trigger: CTCCATGGGAAGCTTGAACCAGGCTAGAACAGCTGT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTCCAGGGCTTCTCCAGTaGAATAAAGTTTATGCCCCC +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAPGLLQ*NKVYAP
Trigger: GGGGGCATAAACTTTATTCCACTGGAGAAGCCCTGG...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGACTTGCACTTACTCTaGCCCTCTGCAAGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGADLHLL*PSARSS
Trigger: TGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTAGTATCCGGAGGTATTaGCTCCCCTTCTCCTATGGT +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGASIRRY*LPFSYG
Trigger: ACCATAGGAGAAGGGGAGTCAATACCTCCGGATACT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTCGCCAACTTTTCACCTaGATCTCTTCCAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPARQLFT*ISSRTS
Trigger: GCTTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCG...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTTGGGAAGCCACTGCATaGAGAATCCAAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAWEATA*RIQKSS
Trigger: ACTGCTCTTTTGGATTCTTCATGCAGTGGCTTCCCA...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTTGGGGGAGAGAAGGCTaGCTGCTTCTTGTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAWGREG*LLLVEK
Trigger: TTTTTCTACAAGAAGCAGTCAGCCTTCTCTCCCCCA...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCTGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASALCDVV*NPEEPL
Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACAG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTATTGTTACAAGGGTGTaGAGAAGGACACCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPAIVTRV*RRTPLR
Trigger: CCTGAGAGGTGTCCTTCTGCACACCCTTGTAACAAT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGACGCAGGTGGTCCTaGCCAGAGGTGGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRRRWS*PEVACH
Trigger: GTGGCAGGCCACCTCTGGGCAGGACCACCTGCGTCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGCCTCACCTCCTGGGTaGCAGACGCAGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPASPPG*QTQVVL
Trigger: CAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTAGCCACTGCTGCTCCTaGATTCACCCAAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGASHCCS*IHPRKQ
Trigger: TTGTTTCCTTGGGTGAATGCAGGAGCAGCAGTGGCT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCTGAGGCCTGTGGCGTaGGTACCTGGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGELRPVA*VPGRDF
Trigger: GAAGTCTCTGCCAGGTACCCACGCCACAGGCCTCAG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGGGCTGGGGAAGCCATaGACCCCTCTGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPGLGKP*TPLPAL
Trigger: GAGTGCAGGCAGAGGGGTCCATGGCTTCCCCAGCCC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGACACCACTGTCCAGGTaGGAAGGGCAGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGETPLSR*EGQPLL
Trigger: CAGCAGTGGCTGCCCTTCCCACCTGGACAGTGGTGT...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAGCGACCCCGCTCCTTTaGGGTAGGCCCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQATPLL*GRPRAS
Trigger: AGAGGCCCGGGGCCTACCTCAAAGGAGCGGGGTCGC...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAACAGGCCCAGACCCACTaGCGGTGGCCCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQQAQTH*RWPMKP
Trigger: GGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTG...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCCAGGTCTACGTCCATaGCCTCCATGGCGGGGACCG +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRPGLRP*PPWRGP
Trigger: CGGTCCCCGCCATGGAGGGCATGGACGTAGACCTGG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTTTCAAGCTTGCCTACTaGACACCTGCTGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASAFKLAY*TPAGEL
Trigger: CAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAA...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGGGCCACCTTCAAGCTTaGCTACTGCACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEGHLQA*LLHTCW
Trigger: CCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCC...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCAGTCAATCAGCCTCTTaGTTCAGCTGGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISSQSAS*FSWAAT
Trigger: AGTGGCAGCCCAGCTGAAGCAAGAGGCTGATTGACT...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGAAGAACAGCTGGGCATaGATGGGCTCCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEKNSWA*MGSREA
Trigger: TGCCTCCCTGGAGCCCATGCATGCCCAGCTGTTCTT...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTACAGTGGAGATGTGCTaGTTCAAGGCTACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGATVEMC*FKATKQ
Trigger: CTGCTTAGTAGCCTTGAAGCAGCACATCTCCACTGT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCGACAACAGAGAAGCATaGGCCACCTTCAAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISDNREA*ATFKLA
Trigger: GGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTC...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCAAGTAGTCAGTGGCTaGCCCTTCCCCATGACAAAT +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASAQVVSG*PFPMTN
Trigger: ATTTGTCATGGGGAAGGGCCAGCCACTGACTACTTG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTCGCTTCTCAGCAGGCTaGCTCCAGCCACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLRFSAG*LQPPPG
Trigger: CCCTGGGGGTGGCTGGAGCCAGCCTGCTGAGAAGCG...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGTGGTAACAGGCAGGTaGCCCTGCAACAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPVVTGR*PCNSTL
Trigger: CAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCAC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTAGGGACTATTGGGGCTaGGAGGTAGCCACTACCACC +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSRDYWG*EVATTT
Trigger: GGTGGTAGTGGCTACCTCTCAGCCCCAATAGTCCCT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTGGAGGCCAGGCCTCTaGCCCAGAATTCTGGATCCG +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMWRPGL*PRILDP
Trigger: CGGATCCAGAATTCTGGGGCAGAGGCCTGGCCTCCA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374023.8
CDS-3UTR GCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCCTTCTACCTTACGATaGGGCTGTGTGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISPSTLR*GCVLNS
Trigger: GGAGTTCAACACACAGCCGCATCGTAAGGTAGAAGG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTCACCTGCTGGTGAGTTaGACCAACACCCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSHLLVS*TNTRVC
Trigger: GCACACACGGGTGTTGGTGCAACTCACCAGCAGGTG...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGGCCACCTTCAAGCTTaGCTACTGCACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSGHLQA*LLHTCW
Trigger: CCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTATCCACATCTCAACCTaGTCAGAATCTACAGGATGC +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGAIHIST*SESTGC
Trigger: GCATCCTGTAGATTCTGAGCAGGTTGAGATGTGGAT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTAGTCCCAGACCCAGCTaGACCACGCTTCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPSPRPS*TTLLSR
Trigger: CCTGCTGAGAAGCGTGGTGCAGCTGGGTCTGGGACT...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGCAGAGACTTCCCTCTaGTCTGCTAGGGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSAETSL*SAREWS
Trigger: GCTCCACTCCCTAGCAGAGCAGAGGGAAGTCTCTGC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTTTGGGACATTTAACTTaGCAAGTGTGGTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPALGHLT*QVWLPR
Trigger: TCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAA...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTAGGTATTTATTCTCATaGCCATTTCCCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGARYLFS*PFPTMA
Trigger: GGCCATGGTGGGAAATGGGCATGAGAATAAATACCT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCAAGGCTTCCTCTGCTaGCCACACAGGGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEQGFLC*PHREVW
Trigger: CCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCCTGCAACAGCACCCTaGATCCATATCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEPATAP*IHIPGS
Trigger: AGAGCCAGGGATATGGATCCAGGGTGCTGTTGCAGG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGTGCTCTGCTAGGGAGTaGAGCACTCCCATGTGCACA +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGECSARE*STPMCT
Trigger: TGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCA...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTTGTGGCGTGGGTACCTaGCAGAGACTTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSCGVGT*QRLPSA
Trigger: AGCAGAGGGAAGTCTCTGCCAGGTACCCACGCCACA...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGACAGCTGGGCATGCATaGGCTCCAGGGAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMTAGHA*APGRQC
Trigger: ACACTGCCTCCCTGGAGCCCATGCATGCCCAGCTGT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTTTAACTTGCCAAGTGTaGTTGCCTAGAAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGALTCQV*LPRSKR
Trigger: CCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAA...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGGTCTGCCTCACCTCCTaGGTGCCAGACGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRVCLTS*VPDAGG
Trigger: ACCACCTGCGTCTGGCACCCAGGAGGTGAGGCAGAC...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGTGCACTTCTGAGCCCTaGCAACCCTACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGECTSEP*QPYHPL
Trigger: GAGAGGATGGTAGGGTTGCCAGGGCTCAGAAGTGCA...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTTCAACACCATTCCTGTaGTTCAGCATTCACACATGC +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASASTPFL*FSIHTC
Trigger: GCATGTGTGAATGCTGAATCACAGGAATGGTGTTGA...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCGCCAACTTTTCACCTaGATCTCTTCCAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISRQLFT*ISSRTS
Trigger: GCTTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAGGCCACCTGCCTGAGTaGGCAGCCAGTCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEGHLPE*AASQSA
Trigger: GGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCC...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGACAAAAAGCCATCCTaGGGCCTGTGGCGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPDKKPS*GLWRGY
Trigger: GTACCCACGCCACAGGCCTCAGGATGGCTTTTTGTC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGGAAAGCAGGGGTTGTaGAGCCTCCCACAATCCTGC +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPGKQGL*SLPQSC
Trigger: GCAGGATTGTGGGAGGCTTCACAACCCCTGCTTTCC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGACTGACGGTGGCCCATaGAGCCCCTGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRTDGGP*SPCWET
Trigger: AGTTTCCCAGCAGGGGCTTCATGGGCCACCGTCAGT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGGGACTATTGGGGCTaGGAGGTAGCCACTACCACC +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRDYWG*EVATTT
Trigger: GGTGGTAGTGGCTACCTCTCAGCCCCAATAGTCCCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCTGCTGGGCTCAGATTaGATTTGGGGAGGTATTTAT +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASALLGSD*IWGGIY
Trigger: ATAAATACCTCCCCAAATTCAATCTGAGCCCAGCAG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGCGAGGCAGGGTGGGGTaGGTAATCAGCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRGRVG*VISLHF
Trigger: GAAGTGCAAGCTGATTACTCACCCCACCCTGCCTCG...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGAGTCAATCAGCCTCTTaGTTCAGCTGGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGESQSAS*FSWAAT
Trigger: AGTGGCAGCCCAGCTGAAGCAAGAGGCTGATTGACT...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTCAGAATCTACAGGATaGCAGGGCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLSESTG*QGRPPA
Trigger: GGCAGGTGGCCTGCCCTGGCATCCTGTAGATTCTGA...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTCAGAATCTACAGGATaGCAGGGCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSESTG*QGRPPA
Trigger: GGCAGGTGGCCTGCCCTGGCATCCTGTAGATTCTGA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCACAGTGGAGATGTGCTaGTTCAAGGCTACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISTVEMC*FKATKQ
Trigger: CTGCTTAGTAGCCTTGAAGCAGCACATCTCCACTGT...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCTTGCCAAGTGTGGTTaGCTAGAAGCAAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISLAKCG*LEARGR
Trigger: TCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAGCCTCACCTCCTGGGTaGCAGACGCAGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQASPPG*QTQVVL
Trigger: CAGGACCACCTGCGTCTGGCACCCAGGAGGTGAGGC...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGCCTAACCATGGTGTCTaGCTCACCTCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMPNHGV*LTSWVP
Trigger: TGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGG...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCACACACCTCACTCCATaGACACTGACAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISTHLTP*TLTDSS
Trigger: GGAAGAATCTGTCAGTGTGCATGGAGTGAGGTGTGT...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTAAGGGCAGCCACTGCTaGTCCTGCATTCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPKGSHC*SCIHPR
Trigger: CCTTGGGTGAATGCAGGAGCAGCAGTGGCTGCCCTT...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCAGGGAGGCGGGGCTGTaGAGGTCCTCTCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLREAGL*RSSHFH
Trigger: ATGGAAATGAGAGGACCTCCACAGCCCCGCCTCCCT...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGGCCTCTTGCTTCAGCTaGGCTGCCACTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRASCFS*AATCPP
Trigger: AGGTGGGCAAGTGGCAGCCCAGCTGAAGCAAGAGGC...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTGTGGCGTGGGTACCTaGCAGAGACTTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLCGVGT*QRLPSA
Trigger: AGCAGAGGGAAGTCTCTGCCAGGTACCCACGCCACA...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCTGAGGCCTGTGGCGTaGGTACCTGGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRLRPVA*VPGRDF
Trigger: GAAGTCTCTGCCAGGTACCCACGCCACAGGCCTCAG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGGACTTGCACTTACTCTaGCCCTCTGCAAGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEDLHLL*PSARSS
Trigger: TGAGCTCCTTGCAGAGGGCCAGAGTAAGTGCAAGTC...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 72 bp ACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGTaGCACCAACACCCGTGTGTGCACATGTGGTGCATA +
Preference number: 4 (lower is better)
Translates to: TFKLAYCTPAGE*HQHPCVHMWCI
Trigger: TATGCACCACATGTGCACACACGGGTGTTGGTGCAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 72 bp TGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTaGCCTACTGCACACCTGCTGGTGAGTTGCACCAAC +
Preference number: 4 (lower is better)
Translates to: CVTTEKHGPPSS*PTAHLLVSCTN
Trigger: GTTGGTGCAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGTGGTAACAGGCAGGTaGCCCTGCAACAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLVVTGR*PCNSTL
Trigger: CAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCAC...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAACTGACGGTGGCCCATaGAGCCCCTGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQTDGGP*SPCWET
Trigger: AGTTTCCCAGCAGGGGCTTCATGGGCCACCGTCAGT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCACACCAGCTGTTTGGTaGGGTTCTCTCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLTPAVW*GSLQAG
Trigger: TCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGT...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCTGCTGGGCTCAGATTaGATTTGGGGAGGTATTTAT +
Preference number: 4 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISLLGSD*IWGGIY
Trigger: ATAAATACCTCCCCAAATTCAATCTGAGCCCAGCAG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTTGCACAGAAAATAGGTaGTCCAGAGTAAGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: GQATCLSEQPVNQPLASACTENR*SRVSSS
Trigger: ACTAGAGCTTACTCTGGAGCACCTATTTTCTGTGCA...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGGGAAGGGCAGCCACTaGTGCTCCTGCATTCACCCA +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLGKGSH*CSCIHP
Trigger: TGGGTGAATGCAGGAGCAGCAGTGGCTGCCCTTCCC...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCCAAGGCTTCCTCTGCTaGCCACACAGGGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLQGFLC*PHREVW
Trigger: CCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTG...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTATATTCTTGTATCTTTaGCAGACAGCTGTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PLAHLPANNLASWQGGGAIFLYL*QTAVLA
Trigger: GGCTAGAACAGCTGTCTGCCAAAGATACAAGAATAT...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAACACCACCCAGCTGGATaGGGGTGTGGTAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQHHPAG*GCGNRQ
Trigger: CTGCCTGTTACCACACCCCCATCCAGCTGGGTGGTG...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTGCTCTGCTAGGGAGTaGAGCACTCCCATGTGCACA +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLCSARE*STPMCT
Trigger: TGTGCACATGGGAGTGCTCCACTCCCTAGCAGAGCA...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTAGTGTCTCAGGAGACTaGTACCAGCAGCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSSVSGD*YQQQQS
Trigger: AGACTGCTGCTGCTGGTACCAGTCTCCTGAGACACT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAACAGCTGGGCATGCATaGGCTCCAGGGAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCETAGHA*APGRQC
Trigger: ACACTGCCTCCCTGGAGCCCATGCATGCCCAGCTGT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTCTCTGTCTCCCCAACTaGGTTCAGACCCTATCACCT +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSLCLPN*VQTLSP
Trigger: AGGTGATAGGGTCTGAACCCAGTTGGGGAGACAGAG...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAGCCCATTTCCCACCATaGCCACCCTCAGGCCACACC +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQAHFPP*PPSGHT
Trigger: GGTGTGGCCTGAGGGTGGCCATGGTGGGAAATGGGC...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 72 bp TCCTCAAGGCTTCCTCTGCTGGCCACACAGGGAAGTTaGGTCTTCAGAGAGGTTCTGATGCTAACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSRLPLLATQGS*VFREVLMLTSH
Trigger: GTGGCTTGTTAGCATCAGAACCTCTCTGAAGACCAAACTTCCCTGTGTGGCCAGCAGAGGAAGCCTTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTTCTGGAACTCGGAGATaGGCACGTCCTTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLSGTRR*ARPCRW
Trigger: CCACCGACAAGGACGTGCTCATCTCCGAGTTCCAGA...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCGATTCTTCCCAAGTCTaGACCCCTCTGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLDSSQV*TPLSPQ
Trigger: TTGGGGAGACAGAGGGGTTCAGACTTGGGAAGAATC...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGACACCAGCTGTTTGGTaGGGTTCTCTCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRTPAVW*GSLQAG
Trigger: TCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAACGAGGCAGGGTGGGGTaGGTAATCAGCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCERGRVG*VISLHF
Trigger: GAAGTGCAAGCTGATTACTCACCCCACCCTGCCTCG...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCCTGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLLCDVV*NPEEPL
Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACAG...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAGCAGAGACTTCCCTCTaGTCTGCTAGGGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEAETSL*SAREWS
Trigger: GCTCCACTCCCTAGCAGAGCAGAGGGAAGTCTCTGC...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGAGCCTCCCACAATCCTaGCAGGGACAGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRSLPQS*QGQWRC
Trigger: ACATCTCCACTGTCCCTGGCAGGATTGTGGGAGGCT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGCTGCACTCCATGACTTaGACTTACTCTGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMLHSMT*TYSGPL
Trigger: CAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAG...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCCTGCACTCCATGACTTaGACTTACTCTGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLLHSMT*TYSGPL
Trigger: CAGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAG...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAAGCCATGGACCCCTCTaGCTGCACTCCATGACTTGC +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQSHGPL*LHSMTC
Trigger: GCAAGTCATGGAGTGCAGGCAGAGGGGTCCATGGCT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTCCTAACCATGGTGTCTaGCTCACCTCCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLPNHGV*LTSWVP
Trigger: TGGCACCCAGGAGGTGAGGCAGACACCATGGTTAGG...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTAAGGGCAGCCACTGCTaGTCCTGCATTCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLKGSHC*SCIHPR
Trigger: CCTTGGGTGAATGCAGGAGCAGCAGTGGCTGCCCTT...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCGACAACAGAGAAGCATaGGCCACCTTCAAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLDNREA*ATFKLA
Trigger: GGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTC...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGTGTCTCAGGAGACTaGTACCAGCAGCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSVSGD*YQQQQS
Trigger: AGACTGCTGCTGCTGGTACCAGTCTCCTGAGACACT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCCACAAACATCCAGCTaGCTTTCTACACACACCACT +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGEPQTSS*LSTHTT
Trigger: AGTGGTGTGTGTAGAAAGCCAGCTGGATGTTTGTGG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCAGTATCCGGAGGTATTaGCTCCCCTTCTCCTATGGT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLSIRRY*LPFSYG
Trigger: ACCATAGGAGAAGGGGAGTCAATACCTCCGGATACT...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAAGGCAGCTGAACTTCTaGATCAGCTCCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQRQLNF*ISSGSR
Trigger: CCTGGACCCGGAGCTGATGCAGAAGTTCAGCTGCCT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAACACCTGCTGGTGAGTTaGACCAACACCCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQHLLVS*TNTRVC
Trigger: GCACACACGGGTGTTGGTGCAACTCACCAGCAGGTG...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGGCTATATGACTCCTTaGAGCCACTCATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSGYMTP*SHSLPG
Trigger: ACCAGGTAATGAGTGGCTGCAAGGAGTCATATAGCC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAAAGAACAGCTGGGCATaGATGGGCTCCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQKNSWA*MGSREA
Trigger: TGCCTCCCTGGAGCCCATGCATGCCCAGCTGTTCTT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTAGCCTCCCACAATCCTaGCAGGGACAGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLSLPQS*QGQWRC
Trigger: ACATCTCCACTGTCCCTGGCAGGATTGTGGGAGGCT...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAACTTACTCTGGCCCTCTaGAAGGAGCTCATCTCGCCT +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQLTLAL*KELISP
Trigger: AGGCGAGATGAGCTCCTTGCAGAGGGCCAGAGTAAG...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTAGCCACTGCTGCTCCTaGATTCACCCAAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPSHCCS*IHPRKQ
Trigger: TTGTTTCCTTGGGTGAATGCAGGAGCAGCAGTGGCT...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGAGATCAAGTAGTCAGTaGCTGGCCCTTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRRSSSQ*LALPHD
Trigger: GTCATGGGGAAGGGCCAGCCACTGACTACTTGATCT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAAGGGAGGCGGGGCTGTaGAGGTCCTCTCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQREAGL*RSSHFH
Trigger: ATGGAAATGAGAGGACCTCCACAGCCCCGCCTCCCT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAAATAATCTAGCATCCTaGCAGGGAGGCGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQNNLAS*QGGGAV
Trigger: CACAGCCCCGCCTCCCTGCCAGGATGCTAGATTATT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCTGGATCCATATCCCTaGCTCTCAAACCAACTAAGA +
Preference number: 4 (lower is better)
Translates to: NREAWATFKLAYCTPAGELDPYP*LSNQLR
Trigger: TCTTAGTTGGTTTGAGAGCCAGGGATATGGATCCAG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCCCAGGGCTTCTCCAGTaGAATAAAGTTTATGCCCCC +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLPGLLQ*NKVYAP
Trigger: GGGGGCATAAACTTTATTCCACTGGAGAAGCCCTGG...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAAGCAGTAAGAACAGCTaGGCATGCATGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCESSKNS*ACMGSR
Trigger: CCTGGAGCCCATGCATGCCCAGCTGTTCTTACTGCT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAATGCACTTCTGAGCCCTaGCAACCCTACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCECTSEP*QPYHPL
Trigger: GAGAGGATGGTAGGGTTGCCAGGGCTCAGAAGTGCA...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTCACTCCATGCACACTaGCAGATTCTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLSLHAH*QILPKS
Trigger: AGACTTGGGAAGAATCTGTCAGTGTGCATGGAGTGA...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTCACTCCATGCACACTaGCAGATTCTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSLHAH*QILPKS
Trigger: AGACTTGGGAAGAATCTGTCAGTGTGCATGGAGTGA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCCAGAGTCCTCAAACATaGCACGCCAACTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLQSPQT*HANFSP
Trigger: AGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAATGCCCAGAGGTGGCCTaGCACTTGGTGAAGATTCTA +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCECPEVA*HLVKIL
Trigger: TAGAATCTTCACCAAGTGGCAGGCCACCTCTGGGCA...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAACCTGCAACAGCACCCTaGATCCATATCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQPATAP*IHIPGS
Trigger: AGAGCCAGGGATATGGATCCAGGGTGCTGTTGCAGG...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAACAGCCACTCATTACCTaGTCTCCCTGCCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQQPLIT*SPCLSH
Trigger: GTGAGACAGGCAGGGAGACCAGGTAATGAGTGGCTG...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGACCATCCTCTCCTGCTaGGCTCAGATTGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRTILSC*AQIEFG
Trigger: CCCAAATTCAATCTGAGCCCAGCAGGAGAGGATGGT...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTTCAACACCATTCCTGTaGTTCAGCATTCACACATGC +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPSTPFL*FSIHTC
Trigger: GCATGTGTGAATGCTGAATCACAGGAATGGTGTTGA...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTATATCAGAGGACAACTaGAGAGAAACAGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSISEDN*RETGKG
Trigger: ACCTTTCCCTGTTTCTCTTCAGTTGTCCTCTGATAT...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGTCTCAGAAGAGGATaGGGAGGAACAAACAACACA +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSLRRG*GGTNNT
Trigger: TGTGTTGTTTGTTCCTCCTCATCCTCTTCTGAGACT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAATGGAGCACTCCCATGTaGACAGAAAATAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEWSTPM*TENRCS
Trigger: GGAGCACCTATTTTCTGTGCACATGGGAGTGCTCCA...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTCGCCTCCAAGGATGTaGACAGAAATGGTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMSPPRM*TEMVCS
Trigger: AGAACAAACCATTTCTGTGCACATCCTTGGAGGCGA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTCGCCTCCAAGGATGTaGACAGAAATGGTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLSPPRM*TEMVCS
Trigger: AGAACAAACCATTTCTGTGCACATCCTTGGAGGCGA...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAATGCCCAGAGGTGGCCTaGCACTTGGTGAAGATTCTA +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQCPEVA*HLVKIL
Trigger: TAGAATCTTCACCAAGTGGCAGGCCACCTCTGGGCA...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAACATCTGCAATCTCTTaGGGCTCTAGCGATCTCACC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCETSAIS*GSSDLT
Trigger: GGTGAGATCGCTAGAGCCCCAAGAGATTGCAGATGT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374023.8
CDS-3UTR CCA 90 bp TTATCTCCTCCTAGGCACCATGAGGCCCCACCACAAACATCCAGCTGGCTTTCTGACAAATTCCCCCTTTaGGGCTGTATTTTCATACCT +
Preference number: 4 (lower is better)
Translates to: LSPPRHHEAPPQTSSWLSDKFPL*GCIFIP
Trigger: AGGTATGAAAATACAGCCCCAAAGGGGGAATTTGTC...AGAAAGCCAGCTGGATGTTTGTGGTGGGGCCTCATGGTGCCTAGGAGGAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAACAAGTAGTCAGTGGCTaGCCCTTCCCCATGACAAAT +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQQVVSG*PFPMTN
Trigger: ATTTGTCATGGGGAAGGGCCAGCCACTGACTACTTG...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGTTCAAGCTTCCCATaGAGATATCCACATCTCAAC +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMGSSFP*RYPHLN
Trigger: GTTGAGATGTGGATATCTCCATGGGAAGCTTGAACC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTACAGCTGTTCTAGCCTaGTTCAAGCTTCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLTAVLA*FKLPME
Trigger: CTCCATGGGAAGCTTGAACCAGGCTAGAACAGCTGT...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGAAATGGTTTGTTCTTaGGAAGGGAGACAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPEMVCS*EGRQGA
Trigger: AGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTGGATGTGCACAGAAATaGTTTGTTCTTGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPGCAQK*FVLGKG
Trigger: TCCCTTCCCAAGAACAAACCATTTCTGTGCACATCC...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAACCATCCTCTCCTGCTaGGCTCAGATTGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCETILSC*AQIEFG
Trigger: CCCAAATTCAATCTGAGCCCAGCAGGAGAGGATGGT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTAACAAGCCACAGGGTTaGCGAATACAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPNKPQG*RIQMSK
Trigger: CTTTGACATTTGTATTCGTCAACCCTGTGGCTTGTT...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTTGGGGGAGAGAAGGCTaGCTGCTTCTTGTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLWGREG*LLLVEK
Trigger: TTTTTCTACAAGAAGCAGTCAGCCTTCTCTCCCCCA...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAACCTTCTACCTTACGATaGGGCTGTGTGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQPSTLR*GCVLNS
Trigger: GGAGTTCAACACACAGCCGCATCGTAAGGTAGAAGG...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAATTCAAGCTTGCCTACTaGACACCTGCTGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQFKLAY*TPAGEL
Trigger: CAACTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAA...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGGCTATATGACTCCTTaGAGCCACTCATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLGYMTP*SHSLPG
Trigger: ACCAGGTAATGAGTGGCTGCAAGGAGTCATATAGCC...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTGCACAGAAAATAGGTaGTCCAGAGTAAGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLCTENR*SRVSSS
Trigger: ACTAGAGCTTACTCTGGAGCACCTATTTTCTGTGCA...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGTTGGGACATTTAACTTaGCAAGTGTGGTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMLGHLT*QVWLPR
Trigger: TCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAA...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGAAGGGAGACAAGGTaGTTGGGACATTTAACTTGC +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQGRETR*LGHLTC
Trigger: GCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCC...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAACACACCTCACTCCATaGACACTGACAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQTHLTP*TLTDSS
Trigger: GGAAGAATCTGTCAGTGTGCATGGAGTGAGGTGTGT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGACAAATTCCCCCTTTaGGGCTGTATTTTCATACCT +
Preference number: 4 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMDKFPL*GCIFIP
Trigger: AGGTATGAAAATACAGCCCCAAAGGGGGAATTTGTC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAACCACAAACATCCAGCTaGCTTTCTACACACACCACT +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQPQTSS*LSTHTT
Trigger: AGTGGTGTGTGTAGAAAGCCAGCTGGATGTTTGTGG...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAATGGGAAGCCACTGCATaGAGAATCCAAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQWEATA*RIQKSS
Trigger: ACTGCTCTTTTGGATTCTTCATGCAGTGGCTTCCCA...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAATTGTTACAAGGGTGTaGAGAAGGACACCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQIVTRV*RRTPLR
Trigger: CCTGAGAGGTGTCCTTCTGCACACCCTTGTAACAAT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAATCCACATCTCAACCTaGTCAGAATCTACAGGATGC +
Preference number: 4 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQIHIST*SESTGC
Trigger: GCATCCTGTAGATTCTGAGCAGGTTGAGATGTGGAT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAACTTGCCAAGTGTGGTTaGCTAGAAGCAAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQLAKCG*LEARGR
Trigger: TCTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAG...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTTCTGCCCCAGAATTCTaGATCCGCCATGTTTTTACA +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLSAPEF*IRHVFT
Trigger: TGTAAAAACATGGCGGATCCAGAATTCTGGGGCAGA...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374023.8
CDS-3UTR CCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAGGTTCAAGCTTCCCATaGAGATATCCACATCTCAAC +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCEGSSFP*RYPHLN
Trigger: GTTGAGATGTGGATATCTCCATGGGAAGCTTGAACC...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTTTAACTTGCCAAGTGTaGTTGCCTAGAAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLLTCQV*LPRSKR
Trigger: CCTCTTGCTTCTAGGCAACCACACTTGGCAAGTTAA...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTTGGATGTGCACAGAAATaGTTTGTTCTTGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LQGCAQKWFVLGKGDKVLGCAQK*FVLGKG
Trigger: TCCCTTCCCAAGAACAAACCATTTCTGTGCACATCC...AAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 72 bp TATCAGAGGACAACTGAAGAGAAACAGGGAAAGGTGTaGTGTGACAACAGAGAAGCATGGGCCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: YQRTTEEKQGKV*CDNREAWATFK
Trigger: CTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCTGTTTCTCTTCAGTTGTCCTCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCATGACATCAGAATTCTaGATCCGCCATGTTTTTACA +
Preference number: 4 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLMTSEF*IRHVFT
Trigger: TGTAAAAACATGGCGGATCCAGAATTCTGATGTCAT...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAGAAATGGTTTGTTCTTaGGAAGGGAGACAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQEMVCS*EGRQGA
Trigger: AGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTC...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
3UTR CAA 72 bp AGAAATGGTTTGTTCTTGGGAAGGGAGACAAGGTGCTaGGGACATTTAACTTGCCAAGTGTGGTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: RNGLFLGRETRC*GHLTCQVWLPR
Trigger: TCTAGGCAACCACACTTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR TCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAAACAAGCCACAGGGTTaGCGAATACAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQNKPQG*RIQMSK
Trigger: CTTTGACATTTGTATTCGTCAACCCTGTGGCTTGTT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCTTCTTGTAGAAAAATaGCCCAAATTCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRLLVEK*PKFNCP
Trigger: AGGACAGTTGAATTTGGGGCATTTTTCTACAAGAAG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR GCA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAACTTCTTGTAGAAAAATaGCCCAAATTCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCELLVEK*PKFNCP
Trigger: AGGACAGTTGAATTTGGGGCATTTTTCTACAAGAAG...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CCA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAATATTCTTGTATCTTTaGCAGACAGCTGTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: QSPQTCHANFSPESLPEQIFLYL*QTAVLA
Trigger: GGCTAGAACAGCTGTCTGCCAAAGATACAAGAATAT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTACACCTGCTGGTGAGTaGCACCAACACCCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPATPAGE*HQHPCV
Trigger: CACACACGGGTGTTGGTGCAACTCACCAGCAGGTGT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CCACTTGCCCACCTCCCAGCCAATAATCTAGCATCCTGGCAGGGAGGCGGGGCTGAGGAGCAGGGACTATaGGGGCTGAGAGGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: PLAHLPANNLASWQGGGAEEQGL*GLRGSH
Trigger: GTGGCTACCTCTCAGCCCCAATAGTCCCTGCTCCTC...AGCCCCGCCTCCCTGCCAGGATGCTAGATTATTGGCTGGGAGGTGGGCAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCCTGCACTCCATGACTaGCACTTACTCTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: GQATCLSEQPVNQPLASAPALHD*HLLWPS
Trigger: AGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGGAGGAGCAGGGACTATaGGGGCTGAGAGGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: NREAWATFKLAYCTPAGEEEQGL*GLRGSH
Trigger: GTGGCTACCTCTCAGCCCCAATAGTCCCTGCTCCTC...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGACACCTGCTGGTGAGTaGCACCAACACCCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: NREAWATFKLAYCTPAGETPAGE*HQHPCV
Trigger: CACACACGGGTGTTGGTGCAACTCACCAGCAGGTGT...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCGAGGTGGCCTGCCACTaGGTGAAGATTCTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISEVACH*VKILRG
Trigger: TCCTCTTAGAATCTTCACCAAGTGGCAGGCCACCTC...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AAGACGACTCTGGCAGGCCCAGACCCACTGACGGTGGCCCATGAAGCCCCTGCTAACAACACACATTTTTaGGAACTCAGACACCCAGAC +
Preference number: 5 (lower is better)
Translates to: KTTLAGPDPLTVAHEAPANNTHF*ELRHPD
Trigger: GTCTGGGTGTCTGAGTTCCAAAAAATGTGTGTTGTT...AGCAGGGGCTTCATGGGCCACCGTCAGTGGGTCTGGGCCTGCCAGAGTCGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTCCTGCTGGGCTCAGATaGAATTTGGGGAGGTATTTA +
Preference number: 5 (lower is better)
Translates to: GQATCLSEQPVNQPLASAPAGLR*NLGRYL
Trigger: TAAATACCTCCCCAAATTCAATCTGAGCCCAGCAGG...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCCTGGTCTTGCTCAGTTaGGTCAGGAGCAGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLLVLLS*VRSRSP
Trigger: TGGGCTCCTGCTCCTGACCAAACTGAGCAAGACCAG...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGGCTTGTAGGTTCCAGTaGGTCATGTCCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: NREAWATFKLAYCTPAGEACRFQ*VMSRKK
Trigger: CTTCTTCCTGGACATGACCAACTGGAACCTACAAGC...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCAGTCAATCAGCCTCTaGCTTCAGCTGGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRQSISL*LQLGCH
Trigger: GTGGCAGCCCAGCTGAAGCAAGAGGCTGATTGACTG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGAGGCTATATGACTCCTaGCAGCCACTCATTACCTGG +
Preference number: 5 (lower is better)
Translates to: NREAWATFKLAYCTPAGERLYDS*QPLITW
Trigger: CCAGGTAATGAGTGGCTGCAAGGAGTCATATAGCCT...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCAGGCTGGAAGTAACTTaGATGGGCTTAAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISRLEVT*MGLRLQ
Trigger: CTGTAACCTTAAGCCCATCAAAGTTACTTCCAGCCT...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GGGCAGGCCACCTGCCTGAGTGAGCAGCCAGTCAATCAGCCTCTTGCTTCAGCTAAGGGTGATAACTCATaGGCTGATGCCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: GQATCLSEQPVNQPLASAKGDNS*ADAIKN
Trigger: GTTTTTAATGGCATCAGCCAATGAGTTATCACCCTT...AGCTGAAGCAAGAGGCTGATTGACTGGCTGCTCACTCAGGCAGGTGGCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCGCCACACAGGGAAGTTaGGTCTTCAGAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLATQGS*VFREVL
Trigger: CAGAACCTCTCTGAAGACCAAACTTCCCTGTGTGGC...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGCCACACAGGGAAGTTaGGTCTTCAGAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMATQGS*VFREVL
Trigger: CAGAACCTCTCTGAAGACCAAACTTCCCTGTGTGGC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAACAGTCAATCAGCCTCTaGCTTCAGCTGGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQQSISL*LQLGCH
Trigger: GTGGCAGCCCAGCTGAAGCAAGAGGCTGATTGACTG...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp TGGGGGTGTGGTAACAGGCAGGTGACCCTGCAACAGCACCCTGGATCCATATCCCATATTCTTGTATCTTaGGCAGACAGCTGTTCTAGC +
Preference number: 5 (lower is better)
Translates to: WGCGNRQVTLQQHPGSISHILVS*ADSCSS
Trigger: GCTAGAACAGCTGTCTGCCAAAGATACAAGAATATG...GGATATGGATCCAGGGTGCTGTTGCAGGGTCACCTGCCTGTTACCACACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGCCTGCACTCCATGACTaGCACTTACTCTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLRPALHD*HLLWPS
Trigger: AGAGGGCCAGAGTAAGTGCAAGTCATGGAGTGCAGG...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCGAGGTGGCCTGCCACTaGGTGAAGATTCTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLEVACH*VKILRG
Trigger: TCCTCTTAGAATCTTCACCAAGTGGCAGGCCACCTC...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGGCTTAAGGGAGTATCCGGAGGTATaGACTCCCCTTCTCCTATGG +
Preference number: 5 (lower is better)
Translates to: QLFGEVLSRLEVTLMGLREYPEV*TPLLLW
Trigger: CCATAGGAGAAGGGGAGTCAATACCTCCGGATACTC...CCTTAAGCCCATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGGCTTGTAGGTTCCAGTaGGTCATGTCCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMACRFQ*VMSRKK
Trigger: CTTCTTCCTGGACATGACCAACTGGAACCTACAAGC...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGACTTGCCAAGTGTGGTaGCCTAGAAGCAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMTCQVW*PRSKRK
Trigger: CTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAGT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCACTTGCCAAGTGTGGTaGCCTAGAAGCAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLTCQVW*PRSKRK
Trigger: CTTCCTCTTGCTTCTAGGCAACCACACTTGGCAAGT...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAGAGTATCCGGAGGTATaGACTCCCCTTCTCCTATGG +
Preference number: 5 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQEYPEV*TPLLLW
Trigger: CCATAGGAGAAGGGGAGTCAATACCTCCGGATACTC...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGCGATGCGGCTGTGTGTaGAACTCCGTTTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRCGCV*NSVSKD
Trigger: ATCTTTTGAAACGGAGTTCAACACACAGCCGCATCG...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTACTGCACACCTGCTGGTGAGCATATTCTTGTATCTTaGGCAGACAGCTGTTCTAGC +
Preference number: 5 (lower is better)
Translates to: NREAWATFKLAYCTPAGEHILVS*ADSCSS
Trigger: GCTAGAACAGCTGTCTGCCAAAGATACAAGAATATG...CTCACCAGCAGGTGTGCAGTAGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGCCACACCAGCTGTTTGGTGAGGTTCTCTCCAGGCTGGAAGTAACTTTGATGAGGGAGACAAGGTGCTaGGGACATTTAACTTGCCAA +
Preference number: 5 (lower is better)
Translates to: RPHQLFGEVLSRLEVTLMRETRC*GHLTCQ
Trigger: TTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCT...CATCAAAGTTACTTCCAGCCTGGAGAGAACCTCACCAAACAGCTGGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTAGAAATGGTTTGTTCTaGGGAAGGGAGACAAGGTGC +
Preference number: 5 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPRNGLF*GRETRC
Trigger: GCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCT...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp GCACTGATCCGCAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCGTGCACAGAAATGGTTaGTTCTTGGGAAGGGAGACA +
Preference number: 5 (lower is better)
Translates to: ALIRRVLKHATPTFHLNLVHRNG*FLGRET
Trigger: TGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCAC...GAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTGCGGATCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp AGGGAAAGGTGTTGTGTGACAACAGAGAAGCATGGGCCACCTTCAAGCTTGCCTCCTGCTGGGCTCAGATaGAATTTGGGGAGGTATTTA +
Preference number: 5 (lower is better)
Translates to: RERCCVTTEKHGPPSSLPPAGLR*NLGRYL
Trigger: TAAATACCTCCCCAAATTCAATCTGAGCCCAGCAGG...AGGCAAGCTTGAAGGTGGCCCATGCTTCTCTGTTGTCACACAACACCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAAGGCTATATGACTCCTaGCAGCCACTCATTACCTGG +
Preference number: 5 (lower is better)
Translates to: QSPQTCHANFSPESLPEQRLYDS*QPLITW
Trigger: CCAGGTAATGAGTGGCTGCAAGGAGTCATATAGCCT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAAGGGAGACAAGGTGCTaGGGACATTTAACTTGCCAA +
Preference number: 5 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCERETRC*GHLTCQ
Trigger: TTGGCAAGTTAAATGTCCCAAGCACCTTGTCTCCCT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAACGATGCGGCTGTGTGTaGAACTCCGTTTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: QSPQTCHANFSPESLPEQRCGCV*NSVSKD
Trigger: ATCTTTTGAAACGGAGTTCAACACACAGCCGCATCG...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAAGAAATGGTTTGTTCTaGGGAAGGGAGACAAGGTGC +
Preference number: 5 (lower is better)
Translates to: QSPQTCHANFSPESLPEQRNGLF*GRETRC
Trigger: GCACCTTGTCTCCCTTCCCAAGAACAAACCATTTCT...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp CAGAGTCCTCAAACATGCCACGCCAACTTTTCACCTGAATCTCTTCCAGAACAAGTGCACAGAAATGGTTaGTTCTTGGGAAGGGAGACA +
Preference number: 5 (lower is better)
Translates to: QSPQTCHANFSPESLPEQVHRNG*FLGRET
Trigger: TGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCAC...TTGTTCTGGAAGAGATTCAGGTGAAAAGTTGGCGTGGCATGTTTGAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp TTGGGGCTGTATTTTCATACCTCTACAGATCAGCCGCCACTAACAGGCTGTGAAAGGCTGGAAGTAACTTaGATGGGCTTAAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: LGLYFHTSTDQPPLTGCERLEVT*MGLRLQ
Trigger: CTGTAACCTTAAGCCCATCAAAGTTACTTCCAGCCT...TTCACAGCCTGTTAGTGGCGGCTGATCTGTAGAGGTATGAAAATACAGCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS-3UTR CAA 90 bp ATCTCGCCTCCAAGGATGTGCACAGAAATGGTTTGTTCTTGGGAAGGGAGACAAAAGGGTGATAACTCATaGGCTGATGCCATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: ISPPRMCTEMVCSWEGRQKGDNS*ADAIKN
Trigger: GTTTTTAATGGCATCAGCCAATGAGTTATCACCCTT...TTGTCTCCCTTCCCAAGAACAAACCATTTCTGTGCACATCCTTGGAGGCGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374023.8
ENST00000374026.7
CDS CCA 72 bp TCCTTAGCCAGCAGTGGGAAAAGTAGAGCAGCAACCTaGTTAACAATGAGTAGCCCAAAACAGTTCAGGAAT +
Preference number: 6 (lower is better)
Translates to: SLASSGKSRAAT*LTMSSPKQFRN
Trigger: ATTCCTGAACTGTTTTGGGCTACTCATTGTTAACCAGGTTGCTGCTCTACTTTTCCCACTGCTGGCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374021.1