Pregenerated sensors for ILF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000143621Ensembl transcript IDs: ENST00000361891.9, ENST00000368681.1, ENST00000480213.1, ENST00000615950.4
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTAGTCCCAGCTACTCGGGAGGCTAAGGCGGGAAGATCACTTGCTGTAGTGGAGCTACAATGGTACCACTaGACTCCAGCCTGGCCAACG | + |
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Preference number: 2 (lower is better) Translates to: VVPATREAKAGRSLAVVELQWYH*TPAWPT Trigger: CGTTGGCCAGGCTGGAGTGCAGTGGTACCATTGTAG...CTCCACTACAGCAAGTGATCTTCCCGCCTTAGCCTCCCGAGTAGCTGGGACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR TCA 90 bp | CGGGAGGCTAAGGCGGGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGGTGGTACAAAGGGCCTaGACCCTCCTCCTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: REAKAGRSLAVVEVKAAVVVQRA*TLLLGL Trigger: GAGGCCCAGGAGGAGGGTTCAGGCCCTTTGTACCAC...CACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCCCGCCTTAGCCTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR TCA 90 bp | CGGGAGGCTAAGGCGGGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGACGTTGGCAGAATCTTaGGTATCACCACCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: REAKAGRSLAVVEVKAAVTLAES*VSPPGQ Trigger: CTGACCTGGTGGTGATACTCAAGATTCTGCCAACGT...CACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCCCGCCTTAGCCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR CCA 90 bp | GTAGTCCCAGCTACTCGGGAGGCTAAGGCGGGAAGATCACTTGCTGTAGTGGAGCTCTGTCACCCCTCATaGCGCCTTAAAACACGAACA | + |
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Preference number: 4 (lower is better) Translates to: VVPATREAKAGRSLAVVELCHPS*RLKTRT Trigger: TGTTCGTGTTTTAAGGCGCCATGAGGGGTGACAGAG...CTCCACTACAGCAAGTGATCTTCCCGCCTTAGCCTCCCGAGTAGCTGGGACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR GCA 90 bp | CGGGAGGCTAAGGCGGGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGCAGAGAAAGGATAGATaGCTGTTCAGCAGAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: REAKAGRSLAVVEVKAAVQRKDR*LFSRIG Trigger: CCCAATTCTGCTGAACAGGCATCTATCCTTTCTCTG...CACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCCCGCCTTAGCCTCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR GCA 90 bp | GGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCCTACAATGGTACCACTaGACTCCAGCCTGGCCAACG | + |
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Preference number: 4 (lower is better) Translates to: GRSLAVVEVKAAVSYNGTLQWYH*TPAWPT Trigger: CGTTGGCCAGGCTGGAGTGCAGTGGTACCATTGTAG...GGTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR TCA 90 bp | ATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCACTGCAGGTCAAGGCTGCAGTaGGCTACAATGGTACCACTG | + |
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Preference number: 4 (lower is better) Translates to: ITCCSGGQGCSELQWYHCRSRLQ*ATMVPL Trigger: CAGTGGTACCATTGTAGCTCACTGCAGCCTTGACCT...GCAGTGGTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR CCA 90 bp | GGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCTTAAAACACGAACAATaGAGGCCGCACCAACCGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRSLAVVEVKAAVSYNGTLKHEQ*RPHQPP Trigger: GGGCGGTTGGTGCGGCCTCCATTGTTCGTGTTTTAA...GGTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR TCA 90 bp | ATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCACTGCTATGTTCTGTTCCCATaGCCAGAAACAGGCACACTC | + |
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Preference number: 4 (lower is better) Translates to: ITCCSGGQGCSELQWYHCYVLFP*PETGTL Trigger: GAGTGTGCCTGTTTCTGGTCATGGGAACAGAACATA...GCAGTGGTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR CCA 90 bp | ATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCACTGCGGCACACTCACACGTTaGCAGAATCTTGAGTATCAC | + |
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Preference number: 4 (lower is better) Translates to: ITCCSGGQGCSELQWYHCGTLTR*QNLEYH Trigger: GTGATACTCAAGATTCTGCCAACGTGTGAGTGTGCC...GCAGTGGTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR TCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTGTGGTACAAAGGGCCTaGACCCTCCTCCTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSVVQRA*TLLLGL Trigger: GAGGCCCAGGAGGAGGGTTCAGGCCCTTTGTACCAC...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR GCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTCCTGCAGCCAGAATCTaGAAGCAGCGCCTGTATGCA | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSPAARI*KQRLYA Trigger: TGCATACAGGCGCTGCTTGCAGATTCTGGCTGCAGG...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTTTAAAACACGAACAATaGAGGCCGCACCAACCGCCC | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSLKHEQ*RPHQPP Trigger: GGGCGGTTGGTGCGGCCTCCATTGTTCGTGTTTTAA...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR TCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTACGTTGGCAGAATCTTaGGTATCACCACCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSTLAES*VSPPGQ Trigger: CTGACCTGGTGGTGATACTCAAGATTCTGCCAACGT...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR GCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTACTGAAGAGGCGTCTTaGCGGCGTGTCCCAATAAAA | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSTEEAS*RRVPIK Trigger: TTTTATTGGGACACGCCGGCAAGACGCCTCTTCAGT...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTCTCTGTCACCCCTCATaGCGCCTTAAAACACGAACA | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSLCHPS*RLKTRT Trigger: TGTTCGTGTTTTAAGGCGCCATGAGGGGTGACAGAG...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR TCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTTCTTCTTCCTCTCCTTaGGGTGGTTCTTCTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSSSSSP*GGSSVF Trigger: GAATACAGAAGAACCACCTCAAGGAGAGGAAGAAGA...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR GCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTCAGAGAAAGGATAGATaGCTGTTCAGCAGAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSQRKDR*LFSRIG Trigger: CCCAATTCTGCTGAACAGGCATCTATCCTTTCTCTG...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTTTCCTCTCCTTGAGGTaGTTCTTCTGTATTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSFLSLR*FFCILL Trigger: GAGGAGAATACAGAAGAACCACCTCAAGGAGAGGAA...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR TCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTCACTCTGCAATACTTTaGTATCCAAATGGAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSHSAIL*YPNGVL Trigger: CAGAACTCCATTTGGATATCAAAGTATTGCAGAGTG...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTCAAAGCCAGTTTCGTTaGTCAGCATGGTTAAAACTT | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSQSQFR*SAWLKL Trigger: AAGTTTTAACCATGCTGACCAACGAAACTGGCTTTG...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTGTTTACTCTGGTATATaGAAAGGTTCCAGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSVYSGI*KGSRSL Trigger: CAAACTCCTGGAACCTTTCCATATACCAGAGTAAAC...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTATCCAAATGGAGTTCTaGATCCAGTTTTCGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSIQMEF*IQFSKI Trigger: AATCTTCGAAAACTGGATCCAGAACTCCATTTGGAT...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CCA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTTATTCTAGTTTACTCTaGTATATGGAAAGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSYSSLL*YMERFQ Trigger: CTGGAACCTTTCCATATACCAGAGTAAACTAGAATA...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| 3UTR CAA 72 bp | CTAGTTTACTCTGGTATATGGAAAGGTTCCAGGAGTTaGTCCTTTAATTCAAAGACAGCTTCAAATTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LVYSGIWKGSRS*SFNSKTASNCD Trigger: ATCACAATTTGAAGCTGTCTTTGAATTAAAGGACAAACTCCTGGAACCTTTCCATATACCAGAGTAAACTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | CGGGAGGCTAAGGCGGGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGACCAGGTCAGCCACATaGTGTCCTGTAGTCATTGTC | + |
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Preference number: 5 (lower is better) Translates to: REAKAGRSLAVVEVKAAVTRSAT*CPVVIV Trigger: GACAATGACTACAGGACACAATGTGGCTGACCTGGT...CACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCCCGCCTTAGCCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR CAA 90 bp | GGGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCACGTTGGCAGAATCTaGAGTATCACCACCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GKITCCSGGQGCSELQWYHVGRI*SITTRS Trigger: TGACCTGGTGGTGATACTCAAGATTCTGCCAACGTG...GTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS-3UTR CAA 90 bp | GGAAGATCACTTGCTGTAGTGGAGGTCAAGGCTGCAGTGAGCTACAATGGTACCTCGAACTTCTTCAATTaGCACTTCAAATGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GRSLAVVEVKAAVSYNGTSNFFN*HFKCPW Trigger: CCAGGGACATTTGAAGTGCAAATTGAAGAAGTTCGA...GGTACCATTGTAGCTCACTGCAGCCTTGACCTCCACTACAGCAAGTGATCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368681.1 |
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| CDS CCA 90 bp | ATGTCACTCCTGAGTTTCCATGCTTTCTTCTTCCTCTCCTTGAGGTaGTTCTTCTGTATTCTCCTCTTCTTCCTCTCCTTCCTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: MSLLSFHAFFFLSLR*FFCILLFFLSFLLL Trigger: GAGAAGAAGGAAGGAGAGGAAGAAGAGGAGAATACAGAAGAACCACCTCAAGGAGAGGAAGAAGAAAGCATGGAAACTCAGGAGTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361891.9 ENST00000480213.1 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTACCAGGTCAGCCACATaGTGTCCTGTAGTCATTGTC | + |
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Preference number: 5 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSTRSAT*CPVVIV Trigger: GACAATGACTACAGGACACAATGTGGCTGACCTGGT...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTAACGTTGGCAGAATCTaGAGTATCACCACCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSNVGRI*SITTRS Trigger: TGACCTGGTGGTGATACTCAAGATTCTGCCAACGTT...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTTCGAACTTCTTCAATTaGCACTTCAAATGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSSNFFN*HFKCPW Trigger: CCAGGGACATTTGAAGTGCAAATTGAAGAAGTTCGA...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTTCAAAGCCAGTTTCGTaGGTCAGCATGGTTAAAACT | + |
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Preference number: 5 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSSKPVS*VSMVKT Trigger: AGTTTTAACCATGCTGACCAACGAAACTGGCTTTGA...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTGCACTCTGCAATACTTaGATATCCAAATGGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSALCNT*ISKWSS Trigger: AGAACTCCATTTGGATATCAAAGTATTGCAGAGTGC...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS-3UTR CAA 90 bp | ACACCAACCAGAAAGACCAAGAGCCCTACTAGGAAGTACTTTAATAGTTTTTCTAAAGGTTCCAGGAGTTaGTCCTTTAATTCAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: TPTRKTKSPTRKYFNSFSKGSRS*SFNSKT Trigger: TGTCTTTGAATTAAAGGACAAACTCCTGGAACCTTT...AGAAAAACTATTAAAGTACTTCCTAGTAGGGCTCTTGGTCTTTCTGGTTGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361891.9 ENST00000615950.4 |
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| CDS CCA 72 bp | CTGAGTTTCCATGCTTTCTTCTTCCTCTCCTTGAGGTaGTTCTTCTGTATTCTCCTCTTCTTCCTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSFHAFFFLSLR*FFCILLFFLSF Trigger: GAAGGAGAGGAAGAAGAGGAGAATACAGAAGAACCACCTCAAGGAGAGGAAGAAGAAAGCATGGAAACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361891.9 ENST00000480213.1 ENST00000615950.4 |
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| CDS TCA 72 bp | AGAATCTGCAAGCAGCGCCTAGAACACAGGGAGGTATaGGGTATTAAAGGAATGCACAAAATAGTTTACAAC | + |
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Preference number: 6 (lower is better) Translates to: RICKQRLEHREV*GIKGMHKIVYN Trigger: GTTGTAAACTATTTTGTGCATTCCTTTAATACCTCATACCTCCCTGTGTTCTAGGCGCTGCTTGCAGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480213.1 |
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