RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL7R (Homo sapiens)

Ensembl gene IDs: ENSG00000168685

Ensembl transcript IDs: ENST00000303115.8, ENST00000505093.1, ENST00000506850.5, ENST00000509668.1, ENST00000511031.1, ENST00000511982.1, ENST00000514217.5

Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATaGGGCCCATTCTTGCCACTCTCCCTGCAGTCTAGGGACCTGGAA +
Preference number: 1 (lower is better)
Translates to: VLFVVPRLSRRSWYT*GPFLPLSLQSRDLE
Trigger: TTCCAGGTCCCTAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 90 bp CACTCGTCAAACGTACCCATGTCCAGGGTCAGCGACAGTTTCCTCTaGGATCATGGACGGATGCAGTTGGGTGGTAGCAGCAAGAGAATC +
Preference number: 1 (lower is better)
Translates to: HSSNVPMSRVSDSFL*DHGRMQLGGSSKRI
Trigger: GATTCTCTTGCTGCTACCACCCAACTGCATCCGTCCATGATCTCAGAGGAAACTGTCGCTGACCCTGGACATGGGTACGTTTGACGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 90 bp CTTTCTGGAGTGATGACTACATCCTCAGATGGGCAGTTGGGGCTCTaGACATCCCCTCCAAGCCTCTGCTTCTCAGATTCTTCTAGTTGC +
Preference number: 1 (lower is better)
Translates to: LSGVMTTSSDGQLGL*TSPPSLCFSDSSSC
Trigger: GCAACTAGAAGAATCTGAGAAGCAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCACTCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR CCA 90 bp CTGAGCAACTGGGTTCAATGTCAGGATTCCAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: LSNWVQCQDSRLERK*RGQRAVCSPKAKQE
Trigger: CTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 90 bp AGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATaGATCTCTTCCAAAGCTTTCTGGAGTGATGACTACATCCTCAGA +
Preference number: 1 (lower is better)
Translates to: RGVTCTDIPSQACEG*ISSKAFWSDDYILR
Trigger: TCTGAGGATGTAGTCATCACTCCAGAAAGCTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR GCA 90 bp AGGAAGAGGCAAAGGCTGGTAGGAAATCAGCTGAATCAGCCTGGGTaGCCTAGACCCAGTCATGTTTGTTGGACCAAATTAGCTGTCTTT +
Preference number: 1 (lower is better)
Translates to: RKRQRLVGNQLNQPG*PRPSHVCWTKLAVF
Trigger: AAAGACAGCTAATTTGGTCCAACAAACATGACTGGGTCTAGGGCACCCAGGCTGATTCAGCTGATTTCCTACCAGCCTTTGCCTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 90 bp CTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGGTTaGGGTAGTGTCTATACACATGGGAGGGGTCATGCCTCCTCTCAC +
Preference number: 1 (lower is better)
Translates to: LYCWRTWDNLGMNLG*GSVYTHGRGHASSH
Trigger: GTGAGAGGAGGCATGACCCCTCCCATGTGTATAGACACTACCCCAACCTAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 90 bp CACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCTaGCCCGTACCAAGTCTCTTAGCCCCTCTAGAAGAGCTAAGAAAA +
Preference number: 1 (lower is better)
Translates to: HLICIISRSSATYSS*PVPSLLAPLEELRK
Trigger: TTTTCTTAGCTCTTCTAGAGGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 90 bp CCACATGGTAGAAGCAGGATGCTCTTGACTCATGTTGAGTGCCACTaGACTCAGGAAGAGTGGTCAAAGCAATGTTTCAGAATCTTGCAG +
Preference number: 1 (lower is better)
Translates to: PHGRSRMLLTHVECH*TQEEWSKQCFRILQ
Trigger: CTGCAAGATTCTGAAACATTGCTTTGACCACTCTTCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCTACCATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000505093.1
3UTR TCA 90 bp CTTAAACCTTGTGACCAAATCCACATGGTAGAAGCAGGATGCTCTTaGCTCATGTTGAGTGCCACTGAACTCAGGAAGAGTGGTCAAAGC +
Preference number: 1 (lower is better)
Translates to: LKPCDQIHMVEAGCS*LMLSATELRKSGQS
Trigger: GCTTTGACCACTCTTCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCTACCATGTGGATTTGGTCACAAGGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 90 bp TGCACATCCCCTCCAAGCCTCTGCTTCTCAGATTCTTCTAGTTGCTaGGGAAACGTATCTTGCAGAAAACCTTCCACTTCATCTCTAGCT +
Preference number: 1 (lower is better)
Translates to: CTSPPSLCFSDSSSC*GNVSCRKPSTSSLA
Trigger: AGCTAGAGATGAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAGCAACTAGAAGAATCTGAGAAGCAGAGGCTTGGAGGGGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 90 bp GTTTTGGTAGAAGCTGGACATGGTGACATATGCTTCTTCTTGATTTaGTCCCAGGGAAGTAAGAATGGGCTGACCCTGAGCAACTGGGTT +
Preference number: 1 (lower is better)
Translates to: VLVEAGHGDICFFLI*SQGSKNGLTLSNWV
Trigger: AACCCAGTTGCTCAGGGTCAGCCCATTCTTACTTCCCTGGGATCAAATCAAGAAGAAGCATATGTCACCATGTCCAGCTTCTACCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 90 bp TCAGAGACCTGGCATGAGATTTTGTGGAGCCTCCTATTTGAGACTTaGCTCCCATTTCTACAAAAGGTAAAGAACACCTGCCCACTGATG +
Preference number: 1 (lower is better)
Translates to: SETWHEILWSLLFET*LPFLQKVKNTCPLM
Trigger: CATCAGTGGGCAGGTGTTCTTTACCTTTTGTAGAAATGGGAGTCAAGTCTCAAATAGGAGGCTCCACAAAATCTCATGCCAGGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 90 bp CCACAGTCAGTTCACTCATTGCATGTACTTGTAACTCTTTCTCCCTaGAGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTT +
Preference number: 1 (lower is better)
Translates to: PQSVHSLHVLVTLSP*SLWQPLLLENLGQF
Trigger: AAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACTTCAGGGAGAAAGAGTTACAAGTACATGCAATGAGTGAACTGACTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 90 bp TGCACACACCTCCCAGGATTATTGTCAGGATGGAGTGAGACAAGGTaGGCAGAGCACTTGCAAAGCACTGGATATATATTAAATCCTAAT +
Preference number: 1 (lower is better)
Translates to: CTHLPGLLSGWSETR*AEHLQSTGYILNPN
Trigger: ATTAGGATTTAATATATATCCAGTGCTTTGCAAGTGCTCTGCGCACCTTGTCTCACTCCATCCTGACAATAATCCTGGGAGGTGTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 90 bp TGGGAGATGGGTTTGCTGCACTTTGCTGAGCTGACATTACTCAGTTaGCTTGACTTTGAGTTAGTCATTAGAAGTCAGTCTAGACCAAGA +
Preference number: 1 (lower is better)
Translates to: WEMGLLHFAELTLLS*LDFELVIRSQSRPR
Trigger: TCTTGGTCTAGACTGACTTCTAATGACTAACTCAAAGTCAAGGCAACTGAGTAATGTCAGCTCAGCAAAGTGCAGCAAACCCATCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 90 bp CTCTTTCTCCCTGAAGTTTGTGGCAGCCTCTATTGCTGGAGAACTTaGGACAATTTAGGGATGAATTTAGGTTGGGGTAGTGTCTATACA +
Preference number: 1 (lower is better)
Translates to: LFLPEVCGSLYCWRT*DNLGMNLGWGSVYT
Trigger: TGTATAGACACTACCCCAACCTAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACTTCAGGGAGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 90 bp GACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCAGTCTaGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGT +
Preference number: 1 (lower is better)
Translates to: DFPFKSSLSLTVSSV*VSYTSLVLVEAGHG
Trigger: ACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR GCA 90 bp TCCCTGCAGTCTAGGGACCTGGAAGAGGAGAGAATAGGGGCGTCACATGCACTGGGGCAGTTGGGGCTCTaGACATCCCCTCCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: SLQSRDLEEERIGASHALGQLGL*TSPPSL
Trigger: GAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCC...CAGTGCATGTGACGCCCCTATTCTCTCCTCTTCCAGGTCCCTAGACTGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp CCATTCTTGCCACTCTCCCTGCAGTCTAGGGACCTGGAAGAGGAGAGAATAGGGGGGCGTCACATGCACTaGCATTCCCAGCCAGGCATG +
Preference number: 2 (lower is better)
Translates to: PFLPLSLQSRDLEEERIGGRHMH*HSQPGM
Trigger: CATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCC...CCCTATTCTCTCCTCTTCCAGGTCCCTAGACTGCAGGGAGAGTGGCAAGAATGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp GGAGGTCCTGGTACACATGAGGCCCATTCTTGCCACTCTCCCTGCAGTCTAGGGTCCCAGCCAGGCATGTaGGGGATGAATCTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: GGPGTHEAHSCHSPCSLGSQPGM*GMNLFQ
Trigger: TTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGA...CCCTAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp ATGACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTCCAGAGTCTTCTTATaGTCGGGGAGACTGGGCCAT +
Preference number: 2 (lower is better)
Translates to: MTTSSDGQLGLCTSPPSLSRVFL*SGRLGH
Trigger: ATGGCCCAGTCTCCCCGATCATAAGAAGACTCTGGA...GAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514217.5
3UTR-3UTR TCA 90 bp ATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCATGTTGAGTGCCACTaGACTCAGGAAGAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: IGASHALTFPARHVRDESHVECH*TQEEWS
Trigger: TGACCACTCTTCCTGAGTTCAGTGGCACTCAACATG...AGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR TCA 90 bp CAGGATTCCAGATTGGAGAGAAAATGGAGGGGGCAGCGTGCTGTTTGTAGTCCCGAAGCAGGATGCTCTTaGCTCATGTTGAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: QDSRLERKWRGQRAVCSPEAGCS*LMLSAT
Trigger: AGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTC...GGGACTACAAACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCTGGAATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR CCA 90 bp CTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGCTTTCTGGAGACTACATCCTCAGATaGGCAGTTGGGGCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: LTFPARHVRDESLPKLSGDYILR*AVGALH
Trigger: GTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC...TCCAGAAAGCTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp GCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAATGTCATCCACCCTATaGATCTGGCAGTCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: ASHALTFPARHVRDESLPMSSTL*IWQSRK
Trigger: TTTCCTGGACTGCCAGATTCATAGGGTGGATGACAT...TGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR GCA 90 bp TGGGCTGACCCTGAGCAACTGGGTTCAATGTCAGGATTCCAGATTGGAGAGAAAAATAGGGGCGTCACATaGACTGACATTCCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: WADPEQLGSMSGFQIGEKNRGVT*TDIPSQ
Trigger: CTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATT...TTTCTCTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp AAGAATGGGCTGACCCTGAGCAACTGGGTTCAATGTCAGGATTCCAGATTGGAGGTCTTCTCTGTGCTGTaGGGGAGACTAGGAACTCTA +
Preference number: 2 (lower is better)
Translates to: KNGLTLSNWVQCQDSRLEVFSVL*GRLGTL
Trigger: TAGAGTTCCTAGTCTCCCTCACAGCACAGAGAAGAC...CTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR TCA 90 bp AAATCATCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGGGCGTCACATGCACTaGCATTCCCAGCCAGGCATG +
Preference number: 2 (lower is better)
Translates to: KSSLSLTVSSVWVSYTSLGRHMH*HSQPGM
Trigger: CATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCC...CAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CCA 90 bp GGAAGAGGAGAGAATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTTCTTCCAAAGCTTTCTaGAGTGATGACTACATCCTC +
Preference number: 2 (lower is better)
Translates to: GRGENRGVTCTDIPSQACSSKAF*SDDYIL
Trigger: GAGGATGTAGTCATCACTCCAGAAAGCTTTGGAAGA...ACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATTCTCTCCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTTGGGGCAGTCCTCAGTaGAGAGAAAGGCACATGGCT +
Preference number: 2 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAWGSPQ*RERHMA
Trigger: AGCCATGTGCCTTTCTCTTCACTGAGGACTGCCCCA...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR TCA 90 bp CATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGCTTATGTCATCCACCCTATaGATCTGGCAGTCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: HALTFPARHVRDESLPKLMSSTL*IWQSRK
Trigger: TTTCCTGGACTGCCAGATTCATAGGGTGGATGACAT...AAGCTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp ATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTGATTCTTCTAGTTGCTaGGGAAACGTATCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: IGASHALTFPARHVRDESDSSSC*GNVSCR
Trigger: TCTGCAAGATACGTTTCCTCAGCAACTAGAAGAATC...AGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp TTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGGTAGGTCCTGGTACACATaGGGCCCATTCTTGCCACTC +
Preference number: 2 (lower is better)
Translates to: FVAHGKFSLGFLHFTGFGRSWYT*GPFLPL
Trigger: GAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCT...ACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR GCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCAATGTTTCAGAATCTTaGAGACTGTGTAGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: FQELCHIFFLARTKSLSPNVSES*RLCSGV
Trigger: AACCCCACTACACAGTCTGCAAGATTCTGAAACATT...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp TCTGGAGTGATGACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTAATGTTTCAGAATCTTaGAGACTGTGTAGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: SGVMTTSSDGQLGLCTSPNVSES*RLCSGV
Trigger: AACCCCACTACACAGTCTGCAAGATTCTGAAACATT...AGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCACTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR TCA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGGAAGCAGGATGCTCTTaGCTCATGTTGAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQEAGCS*LMLSAT
Trigger: AGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTC...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR TCA 90 bp ATCATCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTCCCAGCCAGGCATGTaGGGGATGAATCTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: IIFVAHGKFSLGFLHFTGSQPGM*GMNLFQ
Trigger: TTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGA...ACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CCA 90 bp CACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGCTGACCCTGAGCAACTaGGTTCAATGTCAGGATTCC +
Preference number: 2 (lower is better)
Translates to: HGKFSLGFLHFTGFGRSWLTLSN*VQCQDS
Trigger: GGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAG...CCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR GCA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGGACAGTCCTAGTTTTTaGTCATTGTCCCGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQDSPSF*SLSRRD
Trigger: ATCCCTCCGGGACAATGAGCAAAAACTAGGACTGTC...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp AAATCATCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: KSSLSLTVSSVWVSYTSLRLERK*RGQRAV
Trigger: AACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCT...CAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR CAA 90 bp GAAGAGCTAAGAAAATGCAGGTGTGCACCTCTGAACAGCCCATACTaGGCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: EELRKCRCAPLNSPY*AFLKQIPMETTLKE
Trigger: TTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGCCAAGTATGGGCTGTTCAGAGGTGCACACCTGCATTTTCTTAGCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CAA 90 bp CTGAGGAAACGTATCTTGCAGAAAACCTTCCACTTCATCTCTAGCTaGAATGTCATCCACCCTATGAATCTGGCAGTCCAGGAAACTTTC +
Preference number: 2 (lower is better)
Translates to: LRKRILQKTFHFISS*NVIHPMNLAVQETF
Trigger: GAAAGTTTCCTGGACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTCCTCCCTTCACTGTGTaGACAACTTGGACAAGTTAC +
Preference number: 2 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFPPFTV*TTWTSY
Trigger: GTAACTTGTCCAAGTTGTTCACACAGTGAAGGGAGG...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR TCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAAGCGACAGTTTCCTCTaGGATCATGGACGGATGCAG +
Preference number: 2 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLSDSFL*DHGRMQ
Trigger: CTGCATCCGTCCATGATCTCAGAGGAAACTGTCGCT...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCACTCATGCTCTCTTCCTaGCTTCCTCACTCCTCAATC +
Preference number: 2 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSLMLSS*LPHSSI
Trigger: GATTGAGGAGTGAGGAAGGCAGGAAGAGAGCATGAG...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGAGTAGTCGTAGTAATTaGACACACCTCCCAGGATTA +
Preference number: 2 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQSSRSN*THLPGL
Trigger: TAATCCTGGGAGGTGTGTGCAATTACTACGACTACT...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAGAGATCATGGACGGATaGAGTTGGGTGGTAGCAGCA +
Preference number: 2 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLEIMDG*SWVVAA
Trigger: TGCTGCTACCACCCAACTGCATCCGTCCATGATCTC...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCACATGGGAGGGGTCATaGCTCCTCTCACTCGTCAAA +
Preference number: 2 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLTWEGS*LLSLVK
Trigger: TTTGACGAGTGAGAGGAGGCATGACCCCTCCCATGT...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTGGATTATTGTCAGGATaGAGTGAGACAAGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFGLLSG*SETRCA
Trigger: TGCGCACCTTGTCTCACTCCATCCTGACAATAATCC...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTTGCCTATCAAGGAGGTaGAAGGAATGCTTATGGAAG +
Preference number: 2 (lower is better)
Translates to: AFLKQIPMETTLKEEAKACLSRR*KECLWK
Trigger: CTTCCATAAGCATTCCTTCCACCTCCTTGATAGGCA...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCAAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSRLERK*RGQRAV
Trigger: AACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCT...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR TCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCGTCTTCTCTGTGCTGTaGGGGAGACTAGGAACTCTA +
Preference number: 2 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLVFSVL*GRLGTL
Trigger: TAGAGTTCCTAGTCTCCCTCACAGCACAGAGAAGAC...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTATTTATTACTGCTGGTaGAGAGGAGAGCACTTTGGA +
Preference number: 2 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAIYYCW*RGEHFG
Trigger: TCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAAT...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTATGAAAAATGTCTTCTaGTGCCTACAAACCAGGCAG +
Preference number: 2 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAMKNVF*CLQTRQ
Trigger: CTGCCTGGTTTGTAGGCAGCAGAAGACATTTTTCAT...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGAAGAGAAAGGCACATaGCTCAGGGAACTGCAATTA +
Preference number: 2 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLEEKGT*LRELQL
Trigger: TAATTGCAGTTCCCTGAGCCATGTGCCTTTCTCTTC...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp TCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGTCTTCCAAAGCTTTCTaGAGTGATGACTACATCCTC +
Preference number: 2 (lower is better)
Translates to: SLSLTVSSVWVSYTSLVLSSKAF*SDDYIL
Trigger: GAGGATGTAGTCATCACTCCAGAAAGCTTTGGAAGA...CAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR CAA 90 bp CATGGACGGATGCAGTTGGGTGGTAGCAGCAAGAGAATCACTGTCTaGGTAACAAACAAGAGAAATTGTGAGTTTCTAATTTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: HGRMQLGGSSKRITV*VTNKRNCEFLIYSL
Trigger: GAGGGAATAAATTAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCTACCACCCAACTGCATCCGTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR TCA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCGCTCTTGACTCATGTTaGGTGCCACTGAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: IVFITAGAEESTLESKTFALDSC*VPLNSG
Trigger: TCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGC...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCAGGTGCGCAGAGCACTTaGAAAGCACTGGATATATAT +
Preference number: 2 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSGAQST*KALDIY
Trigger: ATATATATCCAGTGCTTTGCAAGTGCTCTGCGCACC...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTAAAAATGTCTTCTGCTaGCTACAAACCAGGCAGATT +
Preference number: 2 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAKNVFC*LQTRQI
Trigger: AATCTGCCTGGTTTGTAGGCAGCAGAAGACATTTTT...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp CCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCATCATTCTTGGCCACTaGGATGTTGCCAACACAACA +
Preference number: 2 (lower is better)
Translates to: PSYRMNQIPKGEVQLFLVIILGH*DVANTT
Trigger: TGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGAT...GACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
3UTR-3UTR CCA 90 bp CCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTaGCCACTGGGATGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: PSYRMNQIPKGEVQLFLVLEYHS*PLGCCQ
Trigger: TTGGCAACATCCCAGTGGCCAAGAATGATATTCCAG...GACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
3UTR CAA 90 bp AACCAGGCAGATTCTACTTTTCCTCCATGTAAATTTACATCATTTTaGTGGCATTTGCCCTGTCTCCAACAGGGCACTTTCAATATGGCT +
Preference number: 2 (lower is better)
Translates to: NQADSTFPPCKFTSF*WHLPCLQQGTFNMA
Trigger: AGCCATATTGAAAGTGCCCTGTTGGAGACAGGGCAAATGCCACAAAAATGATGTAAATTTACATGGAGGAAAAGTAGAATCTGCCTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR TCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTCATGTTGAGTGCCACTaGACTCAGGAAGAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFHVECH*TQEEWS
Trigger: TGACCACTCTTCCTGAGTTCAGTGGCACTCAACATG...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTTGTGGCAGCCTCTATTaGTGGAGAACTTGGGACAAT +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFCGSLY*WRTWDN
Trigger: ATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACA...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTATTTATGAGGCAGAATaGCATCCTTTTATGTGTCTT +
Preference number: 2 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAIYEAE*HPFMCL
Trigger: AAGACACATAAAAGGATGGCATTCTGCCTCATAAAT...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTGACATTACTCAGTTaGCTTGACTTTGAGTTAGTC +
Preference number: 2 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLTLLS*LDFELV
Trigger: GACTAACTCAAAGTCAAGGCAACTGAGTAATGTCAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTTTTCTGTGCAGCATCTaGCCTTTGTGGTTCTGTGAA +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFFLCSI*PLWFCE
Trigger: TTCACAGAACCACAAAGGGCAGATGCTGCACAGAAA...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR GCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAAAGGTAAAGAACACCTaGCCACTGATGAAAAATGTC +
Preference number: 2 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLKVKNT*PLMKNV
Trigger: GACATTTTTCATCAGTGGGCAGGTGTTCTTTACCTT...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTACAAACTGACTCAGTTTaGATCATAAATTATCTAGGC +
Preference number: 2 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLQTDSV*IINYLG
Trigger: GCCTAGATAATTTATGATCCAAACTGAGTCAGTTTG...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTTACCTTCTTTTGACATaGCTGGTCATGGGACTTCAC +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFYLLLT*LVMGLH
Trigger: GTGAAGTCCCATGACCAGCCATGTCAAAAGAAGGTA...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACAGAGGAGAGCACTTTaGAAAGTAAAACATTCACCT +
Preference number: 2 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLQRRAL*KVKHSP
Trigger: AGGTGAATGTTTTACTTTCCAAAGTGCTCTCCTCTG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTGGGATGAATTTAGGTTaGGGTAGTGTCTATACACAT +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFGMNLG*GSVYTH
Trigger: ATGTGTATAGACACTACCCCAACCTAAATTCATCCC...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR TCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTAAGAATAAGATGGTCTaGTCTTACCAGTCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFKNKMV*SYQSFK
Trigger: CTTAAAGGACTGGTAAGATCAGACCATCTTATTCTT...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTTTTACATCATTTTTGTaGCATTTGCCCTGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: RILELEISRCFSMVISSFFTSFL*HLPCLQ
Trigger: TTGGAGACAGGGCAAATGCCACAAAAATGATGTAAA...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 72 bp GTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATaGGGCCCATTCTTGCCACTCTCCCTGCAGTCTAGG +
Preference number: 3 (lower is better)
Translates to: VVPRLSRRSWYT*GPFLPLSLQSR
Trigger: CCTAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 72 bp AACGTACCCATGTCCAGGGTCAGCGACAGTTTCCTCTaGGATCATGGACGGATGCAGTTGGGTGGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: NVPMSRVSDSFL*DHGRMQLGGSS
Trigger: GCTGCTACCACCCAACTGCATCCGTCCATGATCTCAGAGGAAACTGTCGCTGACCCTGGACATGGGTACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 72 bp GTGATGACTACATCCTCAGATGGGCAGTTGGGGCTCTaGACATCCCCTCCAAGCCTCTGCTTCTCAGATTCT +
Preference number: 3 (lower is better)
Translates to: VMTTSSDGQLGL*TSPPSLCFSDS
Trigger: AGAATCTGAGAAGCAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR CCA 72 bp TTGTGGTTCTGTGAACAGCCAGGGTTTGGAGGCCTGTaGGAGATGGGTTTGCTGCACTTTGCTGAGCTGACA +
Preference number: 3 (lower is better)
Translates to: LWFCEQPGFGGL*EMGLLHFAELT
Trigger: TGTCAGCTCAGCAAAGTGCAGCAAACCCATCTCCCACAGGCCTCCAAACCCTGGCTGTTCACAGAACCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp TCCAAAGCTTTCTGGAGTGATGACTACATCCTCAGATaGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: SKAFWSDDYILR*AVGALHIPSKP
Trigger: AGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCACTCCAGAAAGCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp CAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATGAGGAGAAGCAGGATGCTCTaGACTCATGTTGAGTGCCAC +
Preference number: 3 (lower is better)
Translates to: QRAVCSPKAKQEVLVHMRRSRML*THVECH
Trigger: GTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCT...CCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR CAA 90 bp TCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTGCTTCTCACACTTCATCTCTAGCTaGAATGTCATCCACCCTATG +
Preference number: 3 (lower is better)
Translates to: SSDGQLGLCTSPPSLCFSHFISS*NVIHPM
Trigger: CATAGGGTGGATGACATTCAAGCTAGAGATGAAGTG...TGAGAAGCAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 72 bp TTGCACACACCTCCCAGGATTATTGTCAGGATGGAGTaGGACAAGGTGCGCAGAGCACTTGCAAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: LHTPPRIIVRME*DKVRRALAKHW
Trigger: CCAGTGCTTTGCAAGTGCTCTGCGCACCTTGTCTCACTCCATCCTGACAATAATCCTGGGAGGTGTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 72 bp GGGTCAGCGACAGTTTCCTCTGAGATCATGGACGGATaGAGTTGGGTGGTAGCAGCAAGAGAATCACTGTCT +
Preference number: 3 (lower is better)
Translates to: GSATVSSEIMDG*SWVVAARESLS
Trigger: AGACAGTGATTCTCTTGCTGCTACCACCCAACTGCATCCGTCCATGATCTCAGAGGAAACTGTCGCTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTGTGGAGCCTCCTATTaGAGACTTGACTCCCATTTC +
Preference number: 3 (lower is better)
Translates to: FQELCHIFFLARTKSLSPCGASY*RLDSHF
Trigger: GAAATGGGAGTCAAGTCTCAAATAGGAGGCTCCACA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp GAGAGAATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGGGGTTTTGCTAATTTaGTCTTCTCTGTGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: ERIGASHALTFPARHVRDGVLLI*SSLCCE
Trigger: CTCACAGCACAGAGAAGACAAAATTAGCAAAACCCC...ATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR CAA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGCCCAGCCATCATATCTaGGCCCCTCCCTTCACTGTG +
Preference number: 3 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQPSHHI*APPFTV
Trigger: CACAGTGAAGGGAGGGGCCAAGATATGATGGCTGGG...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp GGAAGAGGAGAGAATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTCTGAGGAAACGTATCTaGCAGAAAACCTTCCACTTC +
Preference number: 3 (lower is better)
Translates to: GRGENRGVTCTDIPSQACLRKRI*QKTFHF
Trigger: GAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAG...ACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATTCTCTCCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 72 bp GTGACGTTTGGCACTCAAGAATGGGGCAGTCCTCAGTaGAGAGAAAGGCACATGGCTCAGGGAACTGCAATT +
Preference number: 3 (lower is better)
Translates to: VTFGTQEWGSPQ*RERHMAQGTAI
Trigger: AATTGCAGTTCCCTGAGCCATGTGCCTTTCTCTTCACTGAGGACTGCCCCATTCTTGAGTGCCAAACGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp TGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCTaGCCCGTACCAAGTCTCTTAGCCCCTCTAGAAGAG +
Preference number: 3 (lower is better)
Translates to: CIISRSSATYSS*PVPSLLAPLEE
Trigger: CTCTTCTAGAGGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp TGGGTTCAATGTCAGGATTCCAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTTTGTAGTCCCAAGGCT +
Preference number: 3 (lower is better)
Translates to: WVQCQDSRLERK*RGQRAVCSPKA
Trigger: AGCCTTGGGACTACAAACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCTGGAATCCTGACATTGAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp TGGAGTGATGACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCCCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: WSDDYILRWAVGALHIPSPFKSS*SLTVSS
Trigger: TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGG...GGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp CCATTCTTGCCACTCTCCCTGCAGTCTAGGGACCTGGAAGAGGAGAGAATAGGGCCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: PFLPLSLQSRDLEEERIGPFKSS*SLTVSS
Trigger: TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGG...CCCTATTCTCTCCTCTTCCAGGTCCCTAGACTGCAGGGAGAGTGGCAAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp GCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCACTGTGTAGTGGGGTTTaGCTAATTTTGTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: ASHALTFPARHVRDESLPLCSGV*LILSSL
Trigger: CAGAGAAGACAAAATTAGCAAAACCCCACTACACAG...TGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505093.1
3UTR-3UTR CAA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCCAGTCAGTTCACTCATaGCATGTACTTGTAACTCTT +
Preference number: 3 (lower is better)
Translates to: FQELCHIFFLARTKSLSPQSVHS*HVLVTL
Trigger: AAGAGTTACAAGTACATGCAATGAGTGAACTGACTG...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCCTGTGGGAGATGGGTTaGCTGCACTTTGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: QKCHLICIISRSSATYSSLWEMG*LHFAEL
Trigger: CAGCTCAGCAAAGTGCAGCAAACCCATCTCCCACAG...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 72 bp CAAAGGCTGGTAGGAAATCAGCTGAATCAGCCTGGGTaGCCTAGACCCAGTCATGTTTGTTGGACCAAATTA +
Preference number: 3 (lower is better)
Translates to: QRLVGNQLNQPG*PRPSHVCWTKL
Trigger: TAATTTGGTCCAACAAACATGACTGGGTCTAGGGCACCCAGGCTGATTCAGCTGATTTCCTACCAGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp TCCCAGGGAAGTAAGAATGGGCTGACCCTGAGCAACTaGGTTCAATGTCAGGATTCCAGATTGGAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: SQGSKNGLTLSN*VQCQDSRLERK
Trigger: TTTTCTCTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCATTCTTACTTCCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCTGCAGCATCTGCCCTTaGTGGTTCTGTGAACAGCCA +
Preference number: 3 (lower is better)
Translates to: QKCHLICIISRSSATYSSCSICP*WFCEQP
Trigger: TGGCTGTTCACAGAACCACAAAGGGCAGATGCTGCA...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 72 bp TGTGACCAAATCCACATGGTAGAAGCAGGATGCTCTTaGCTCATGTTGAGTGCCACTGAACTCAGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: CDQIHMVEAGCS*LMLSATELRKS
Trigger: ACTCTTCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCTACCATGTGGATTTGGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp TGGAGAACTTGGGACAATTTAGGGATGAATTTAGGTTaGGGTAGTGTCTATACACATGGGAGGGGTCATGCC +
Preference number: 3 (lower is better)
Translates to: WRTWDNLGMNLG*GSVYTHGRGHA
Trigger: GGCATGACCCCTCCCATGTGTATAGACACTACCCCAACCTAAATTCATCCCTAAATTGTCCCAAGTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGAAGCAGGATGCTCTaGACTCATGTTGAGTGCCAC +
Preference number: 3 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFRSRML*THVECH
Trigger: GTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCT...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTACACCTCCCAGGATTATaGTCAGGATGGAGTGAGACA +
Preference number: 3 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLHLPGL*SGWSET
Trigger: TGTCTCACTCCATCCTGACAATAATCCTGGGAGGTG...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCCATGGACGGATGCAGTaGGGTGGTAGCAGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLHGRMQ*GGSSKR
Trigger: TCTCTTGCTGCTACCACCCAACTGCATCCGTCCATG...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGGCAGAGGAGAGCACTTaGGAAAGTAAAACATTCACC +
Preference number: 3 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQAEEST*ESKTFT
Trigger: GGTGAATGTTTTACTTTCCAAAGTGCTCTCCTCTGC...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 72 bp AGAAGCAGGATGCTCTTGACTCATGTTGAGTGCCACTaGACTCAGGAAGAGTGGTCAAAGCAATGTTTCAGA +
Preference number: 3 (lower is better)
Translates to: RSRMLLTHVECH*TQEEWSKQCFR
Trigger: TCTGAAACATTGCTTTGACCACTCTTCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000505093.1
3UTR TCA 72 bp CCTCCAAGCCTCTGCTTCTCAGATTCTTCTAGTTGCTaGGGAAACGTATCTTGCAGAAAACCTTCCACTTCA +
Preference number: 3 (lower is better)
Translates to: PPSLCFSDSSSC*GNVSCRKPSTS
Trigger: TGAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAGCAACTAGAAGAATCTGAGAAGCAGAGGCTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR CCA 72 bp CCTGAAGTTTGTGGCAGCCTCTATTGCTGGAGAACTTaGGACAATTTAGGGATGAATTTAGGTTGGGGTAGT +
Preference number: 3 (lower is better)
Translates to: PEVCGSLYCWRT*DNLGMNLGWGS
Trigger: ACTACCCCAACCTAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp CTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTCACTTCATCTCTAGCTaGAATGTCATCCACCCTATG +
Preference number: 3 (lower is better)
Translates to: LTVSSVWVSYTSLVLVEAHFISS*NVIHPM
Trigger: CATAGGGTGGATGACATTCAAGCTAGAGATGAAGTG...AGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp TCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGTACACTTCACTGGTTTaGGTAGAAGCTGGACATGGT +
Preference number: 3 (lower is better)
Translates to: SLSLTVSSVWVSYTSLVLYTSLV*VEAGHG
Trigger: ACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTA...CAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 72 bp GTTCACTCATTGCATGTACTTGTAACTCTTTCTCCCTaGAGTTTGTGGCAGCCTCTATTGCTGGAGAACTTG +
Preference number: 3 (lower is better)
Translates to: VHSLHVLVTLSP*SLWQPLLLENL
Trigger: CAAGTTCTCCAGCAATAGAGGCTGCCACAAACTTCAGGGAGAAAGAGTTACAAGTACATGCAATGAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 72 bp AAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTaGCTACAAACCAGGCAGATTCTACTTTTCCTCCAT +
Preference number: 3 (lower is better)
Translates to: KNTCPLMKNVFC*LQTRQILLFLH
Trigger: ATGGAGGAAAAGTAGAATCTGCCTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR GCA 72 bp GTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTaGTGCCTACAAACCAGGCAGATTCTACTTTTCCTC +
Preference number: 3 (lower is better)
Translates to: VKNTCPLMKNVF*CLQTRQILLFL
Trigger: GAGGAAAAGTAGAATCTGCCTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp GTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGTGACATATGCTTCCTGAGGAAACGTATCTaGCAGAAAACCTTCCACTTC +
Preference number: 3 (lower is better)
Translates to: VSYTSLVLVEAGHGDICFLRKRI*QKTFHF
Trigger: GAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAG...GAAGCATATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR TCA 72 bp TGGCATGAGATTTTGTGGAGCCTCCTATTTGAGACTTaGCTCCCATTTCTACAAAAGGTAAAGAACACCTGC +
Preference number: 3 (lower is better)
Translates to: WHEILWSLLFET*LPFLQKVKNTC
Trigger: GCAGGTGTTCTTTACCTTTTGTAGAAATGGGAGTCAAGTCTCAAATAGGAGGCTCCACAAAATCTCATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 72 bp TTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGTaGCATATGCTTCTTCTTGATTTGATCCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: LHFTGFGRSWTW*HMLLLDLIPGK
Trigger: CTTCCCTGGGATCAAATCAAGAAGAAGCATATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR GCA 72 bp GGTTTGCTGCACTTTGCTGAGCTGACATTACTCAGTTaGCTTGACTTTGAGTTAGTCATTAGAAGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: GLLHFAELTLLS*LDFELVIRSQS
Trigger: AGACTGACTTCTAATGACTAACTCAAAGTCAAGGCAACTGAGTAATGTCAGCTCAGCAAAGTGCAGCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp AATCAGCCTGGGTGCCCTAGACCCAGTCATGTTTGTTaGACCAAATTAGCTGTCTTTTCATTTCATGCTATA +
Preference number: 3 (lower is better)
Translates to: NQPGCPRPSHVC*TKLAVFSFHAI
Trigger: TATAGCATGAAATGAAAAGACAGCTAATTTGGTCCAACAAACATGACTGGGTCTAGGGCACCCAGGCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp AACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTaGGATGTTGCCAACACAACACTTTTTAAGCACCAA +
Preference number: 3 (lower is better)
Translates to: NCSLSWNIILGH*DVANTTLFKHQ
Trigger: TTGGTGCTTAAAAAGTGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506850.5
3UTR-3UTR CAA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCAGGGGTTTTGCTAATTTaGTCTTCTCTGTGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSGVLLI*SSLCCE
Trigger: CTCACAGCACAGAGAAGACAAAATTAGCAAAACCCC...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000505093.1
3UTR-3UTR CAA 90 bp CCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCTTGGCCACTGGGATGTaGCCAACACAACACTTTTTA +
Preference number: 3 (lower is better)
Translates to: PSYRMNQIPKGEVQLFLVLATGM*PTQHFL
Trigger: TAAAAAGTGTTGTGTTGGCAACATCCCAGTGGCCAA...GACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506850.5
3UTR CCA 72 bp CTTCAAAGAACTTCTGTGAATAAGGTATCAGAGACCTaGCATGAGATTTTGTGGAGCCTCCTATTTGAGACT +
Preference number: 3 (lower is better)
Translates to: LQRTSVNKVSET*HEILWSLLFET
Trigger: AGTCTCAAATAGGAGGCTCCACAAAATCTCATGCCAGGTCTCTGATACCTTATTCACAGAAGTTCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTATTGCTGGAGAACTaGGGACAATTTAGGGATGAA +
Preference number: 3 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLLLEN*GQFRDE
Trigger: TTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTACCTGGCATGAGATTTaGTGGAGCCTCCTATTTGAG +
Preference number: 3 (lower is better)
Translates to: RILELEISRCFSMVISSFTWHEI*WSLLFE
Trigger: CTCAAATAGGAGGCTCCACAAAATCTCATGCCAGGT...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp AAAATTGCAAAAGCACTAGGCAAACCTAAGGGATTATaGCATTGTATTTATTACTGCTGGTGCAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: KIAKALGKPKGL*HCIYYCWCRGE
Trigger: CTCTCCTCTGCACCAGCAGTAATAAATACAATGCCATAATCCCTTAGGTTTGCCTAGTGCTTTTGCAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CCA 72 bp TTTAAATCATCTTTGTCGCTCACGGTAAGTTCAGTCTaGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCT +
Preference number: 3 (lower is better)
Translates to: FKSSLSLTVSSV*VSYTSLVLVEA
Trigger: AGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR-3UTR CAA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCCCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLPFKSS*SLTVSS
Trigger: TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGG...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTCTGTGTAGTGGGGTTTaGCTAATTTTGTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPLCSGV*LILSSL
Trigger: CAGAGAAGACAAAATTAGCAAAACCCCACTACACAG...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 72 bp GTCATTAGAAGTCAGTCTAGACCAAGAAAGGCAAGATaGTATATGTCAAGCATTAATAATACGTCTCTTCCG +
Preference number: 3 (lower is better)
Translates to: VIRSQSRPRKAR*YMSSINNTSLP
Trigger: CGGAAGAGACGTATTATTAATGCTTGACATATATCATCTTGCCTTTCTTGGTCTAGACTGACTTCTAATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR TCA 72 bp TACCAAGCAGTCACTTTCATTAGGTTTTGCAATTTATaGGGCAGAATGCCATCCTTTTATGTGTCTTTAGGT +
Preference number: 3 (lower is better)
Translates to: YQAVTFIRFCNL*GRMPSFYVSLG
Trigger: ACCTAAAGACACATAAAAGGATGGCATTCTGCCTCATAAATTGCAAAACCTAATGAAAGTGACTGCTTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR-3UTR CAA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTGCTTATGGAAGTGCTTaGAAAATTGCAAAAGCACTA +
Preference number: 3 (lower is better)
Translates to: RILELEISRCFSMVISSFAYGSA*KIAKAL
Trigger: TAGTGCTTTTGCAATTTTCAAAGCACTTCCATAAGC...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGGGGGCAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACGGGCAGTTGGGGCTCTaGACATCCCCTCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGQRAVCSPKAKQEVLVHGQLGL*TSPPSL
Trigger: GAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCC...GTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR GCA 90 bp GACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTGAATAGGGGCGTCACATaGACTGACATTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DYILRWAVGALHIPSKPLNRGVT*TDIPSQ
Trigger: CTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATT...CAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp GGAGGTCCTGGTACACATGAGGCCCATTCTTGCCACTCTCCCTGCAGTCTAGGGCATGTTGAGTGCCACTaGACTCAGGAAGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GGPGTHEAHSCHSPCSLGHVECH*TQEEWS
Trigger: TGACCACTCTTCCTGAGTTCAGTGGCACTCAACATG...CCCTAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR TCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCGCAGGTGTGCACCTCTaGACAGCCCATACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPAGVHL*TAHTWL
Trigger: AAGCCAAGTATGGGCTGTTCAGAGGTGCACACCTGC...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp CAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATGAGGGACTACATCCTCAGATaGGCAGTTGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QRAVCSPKAKQEVLVHMRDYILR*AVGALH
Trigger: GTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC...CCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp TCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTGCTTCTCACTGACCCTGAGCAACTaGGTTCAATGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSDGQLGLCTSPPSLCFSLTLSN*VQCQDS
Trigger: GGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAG...TGAGAAGCAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp TGGGCTGACCCTGAGCAACTGGGTTCAATGTCAGGATTCCAGATTGGAGAGAAAGGGCGTCACATGCACTaGCATTCCCAGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: WADPEQLGSMSGFQIGEKGRHMH*HSQPGM
Trigger: CATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCC...TTTCTCTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp TGGAGTGATGACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCGTCTTCTCTGTGCTGTaGGGGAGACTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: WSDDYILRWAVGALHIPSVFSVL*GRLGTL
Trigger: TAGAGTTCCTAGTCTCCCTCACAGCACAGAGAAGAC...GGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR TCA 90 bp CTCTCCCTGCAGTCTAGGGACCTGGAAGAGGAGAGAATAGGGGCGTCACATGCAGAAGCAGGATGCTCTTaGCTCATGTTGAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: LSLQSRDLEEERIGASHAEAGCS*LMLSAT
Trigger: AGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTC...TGCATGTGACGCCCCTATTCTCTCCTCTTCCAGGTCCCTAGACTGCAGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR GCA 90 bp GGAAGAGGAGAGAATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTCATGAGGCCCATTCTTaGCACTCTCCCTGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: GRGENRGVTCTDIPSQACHEAHS*HSPCSL
Trigger: TAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATG...ACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATTCTCTCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp TGGAGTGATGACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WSDDYILRWAVGALHIPSRLERK*RGQRAV
Trigger: AACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCT...GGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTCATCACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
3UTR CAA 72 bp GACCCCTTCTCTAGTTTTCTGTGCAGCATCTGCCCTTaGTGGTTCTGTGAACAGCCAGGGTTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DPFSSFLCSICP*WFCEQPGFGGL
Trigger: CAGGCCTCCAAACCCTGGCTGTTCACAGAACCACAAAGGGCAGATGCTGCACAGAAAACTAGAGAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TCCCAGGGAAGTAAGAATGGGCTGACCCTGAGCAACTGGGTTCAATGTCAGGATAGGTCCTGGTACACATaGGGCCCATTCTTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SQGSKNGLTLSNWVQCQDRSWYT*GPFLPL
Trigger: GAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCT...ATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCATTCTTACTTCCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCCTGACCCTGAGCAACTaGGTTCAATGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPLTLSN*VQCQDS
Trigger: GGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAG...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTTTCCTCTGAGATCATaGACGGATGCAGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPFPLRS*TDAVGW
Trigger: CCACCCAACTGCATCCGTCCATGATCTCAGAGGAAA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp GAGAGAATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATATGTCATCCACCCTATaGATCTGGCAGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ERIGASHALTFPARHVRDMSSTL*IWQSRK
Trigger: TTTCCTGGACTGCCAGATTCATAGGGTGGATGACAT...ATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp CAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATGAGGATGTCATCCACCCTATaGATCTGGCAGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QRAVCSPKAKQEVLVHMRMSSTL*IWQSRK
Trigger: TTTCCTGGACTGCCAGATTCATAGGGTGGATGACAT...CCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR GCA 90 bp GACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTGGTAGTCATCCAGTTCTaGATCTTCCAAGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: DYILRWAVGALHIPSKPLVVIQF*IFQVSI
Trigger: AATGGAGACTTGGAAGATGCAGAACTGGATGACTAC...CAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR GCA 90 bp TGGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGTGACATATGCGGGCAGTTGGGGCTCTaGACATCCCCTCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: WVSYTSLVLVEAGHGDICGQLGL*TSPPSL
Trigger: GAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCC...GCATATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp GGGGGCAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACAACGGTAAGTTCAGTCTaGGTTTCTTACACTTCACTG +
Preference number: 4 (lower is better)
Translates to: GGSVLFVVPRLSRRSWYTTVSSV*VSYTSL
Trigger: CAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGT...TGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp TCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGTCCAGAGTCTTCTTATaGTCGGGGAGACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SHALTFPARHVRDESLPKSRVFL*SGRLGH
Trigger: ATGGCCCAGTCTCCCCGATCATAAGAAGACTCTGGA...CTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCGGGCGTCACATGCACTaGCATTCCCAGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: QKCHLICIISRSSATYSSGRHMH*HSQPGM
Trigger: CATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCC...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp GTCTGGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGTGACATAGGGCGTCACATGCACTaGCATTCCCAGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: VWVSYTSLVLVEAGHGDIGRHMH*HSQPGM
Trigger: CATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCC...TATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR GCA 90 bp TCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGAATAGGGGCGTCACATaGACTGACATTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHALTFPARHVRDESLPKNRGVT*TDIPSQ
Trigger: CTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATT...CTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR GCA 90 bp ACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTGCTTCAATGTTTCAGAATCTTaGAGACTGTGTAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TSSDGQLGLCTSPPSLCFNVSES*RLCSGV
Trigger: AACCCCACTACACAGTCTGCAAGATTCTGAAACATT...GAAGCAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR GCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCCAGGCTTTCCATAAATaGCTATCAAGGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPQAFHK*LSRRWK
Trigger: CTTCCACCTCCTTGATAGGCATTTATGGAAAGCCTG...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCGTGTCAGCTTTGTGCTaGATAAATTCACATGCGTCC +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPVSALC*INSHAS
Trigger: GGACGCATGTGAATTTATCCAGCACAAAGCTGACAC...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp ATTCCAGATTGGAGAGAAAATGGAGGGGGCAGCGTGCTGTTTGTAGTCCCAAGGAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IPDWRENGGGSVLFVVPRRLERK*RGQRAV
Trigger: AACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCT...CCTTGGGACTACAAACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCGAAGAGAAAGGCACATaGCTCAGGGAACTGCAATTA +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPEEKGT*LRELQL
Trigger: TAATTGCAGTTCCCTGAGCCATGTGCCTTTCTCTTC...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTACCTTCTTTTGACATaGCTGGTCATGGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPYLLLT*LVMGLH
Trigger: GTGAAGTCCCATGACCAGCCATGTCAAAAGAAGGTA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp CCATTCTTGCCACTCTCCCTGCAGTCTAGGGACCTGGAAGAGGAGAGAATAGGGGATTCTTCTAGTTGCTaGGGAAACGTATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PFLPLSLQSRDLEEERIGDSSSC*GNVSCR
Trigger: TCTGCAAGATACGTTTCCTCAGCAACTAGAAGAATC...CCCTATTCTCTCCTCTTCCAGGTCCCTAGACTGCAGGGAGAGTGGCAAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp GAGAGAATAGGGGCGTCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATACGGTAAGTTCAGTCTaGGTTTCTTACACTTCACTG +
Preference number: 4 (lower is better)
Translates to: ERIGASHALTFPARHVRDTVSSV*VSYTSL
Trigger: CAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGT...ATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp GGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTAAAAGCACAGGTCAGTaGGTGCTGCGATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: GEVQLFLVLEYHSWPLGCKSTGQ*VLRSIH
Trigger: GTGAATGGATCGCAGCACTCACTGACCTGTGCTTTT...ACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR TCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTCTCTTGTAGTTTCCTaGAATTCAGGCACTTTACCT +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPSLVVS*NSGTLP
Trigger: AGGTAAAGTGCCTGAATTTCAGGAAACTACAAGAGA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp CAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGTCCAGAGTCTTCTTATaGTCGGGGAGACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QKVRFNCSLSWNIILGHWSRVFL*SGRLGH
Trigger: ATGGCCCAGTCTCCCCGATCATAAGAAGACTCTGGA...CCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGAGCACAGGTCAGTGAGTaGTGCGATCCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KGEVQLFLVLEYHSWPLGAQVSE*CDPFTS
Trigger: GGAAGTGAATGGATCGCAGCACTCACTGACCTGTGC...TCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCGGGCAGTTGGGGCTCTaGACATCCCCTCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLGQLGL*TSPPSL
Trigger: GAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCC...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGAATAGGGGCGTCACATaGACTGACATTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQNRGVT*TDIPSQ
Trigger: CTGGCTGGGAATGTCAGTGCATGTGACGCCCCTATT...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCCAGAGGAGAGCACTTTaGAAAGTAAAACATTCACCT +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPQRRAL*KVKHSP
Trigger: AGGTGAATGTTTTACTTTCCAAAGTGCTCTCCTCTG...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTGTATTTATTACTGCTaGTGCAGAGGAGAGCACTTT +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPCIYYC*CRGEHF
Trigger: AAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGGTTCCCAGCCAGGCATGTaGGGGATGAATCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: FVAHGKFSLGFLHFTGFGSQPGM*GMNLFQ
Trigger: TTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGA...ACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAAGGTCCTGGTACACATaGGGCCCATTCTTGCCACTC +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLRSWYT*GPFLPL
Trigger: GAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCT...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp GCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATGAGGCCCATTACATATGCTTCTTCTTaGTTTGATCCCAGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: AVCSPKAKQEVLVHMRPITYASS*FDPREV
Trigger: TACTTCCCTGGGATCAAATCAAGAAGAAGCATATGT...AATGGGCCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR GCA 90 bp TCATCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTGCACAGGTCAGTGAGTaGTGCGATCCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SSLSLTVSSVWVSYTSLVAQVSE*CDPFTS
Trigger: GGAAGTGAATGGATCGCAGCACTCACTGACCTGTGC...AACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR GCA 90 bp ACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAAGGTTGGAGCTTTCTCTaGAGGAGTGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TVPCPGISFLATGMLPTQGWSFL*RSVSFV
Trigger: CACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACC...TTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CCA 90 bp ACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAATACATTGCTGCCGGTTaGAGCTTTCTCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TVPCPGISFLATGMLPTQYIAAG*SFLCRS
Trigger: ACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTA...TTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CCA 90 bp GTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGTGACATATGCTTCGACTACATCCTCAGATaGGCAGTTGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VSYTSLVLVEAGHGDICFDYILR*AVGALH
Trigger: GTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC...GAAGCATATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp TCTAGCTTGAATGTCATCCACCCTATGAATCTGGCAGTCCAGGAAACTTTCAGGCTGACCCTGAGCAACTaGGTTCAATGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSLNVIHPMNLAVQETFRLTLSN*VQCQDS
Trigger: GGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAG...CCTGAAAGTTTCCTGGACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCAGGGTTTGGAGGCCTGTaGGAGATGGGTTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSGFGGL*EMGLLH
Trigger: GTGCAGCAAACCCATCTCCCACAGGCCTCCAAACCC...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTTTACATCATTTTTGTaGCATTTGCCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FQELCHIFFLARTKSLSPFTSFL*HLPCLQ
Trigger: TTGGAGACAGGGCAAATGCCACAAAAATGATGTAAA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAACACACAGGCCAAGATaGCCAACAGAGCGACAGAGA +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLTHRPR*PTERQR
Trigger: TCTCTGTCGCTCTGTTGGTCATCTTGGCCTGTGTGT...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTTCCAGAGTCTTCTTATaGTCGGGGAGACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFSRVFL*SGRLGH
Trigger: ATGGCCCAGTCTCCCCGATCATAAGAAGACTCTGGA...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTTCCCAGCCAGGCATGTaGGGGATGAATCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFSQPGM*GMNLFQ
Trigger: TTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGA...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTAGGTCCTGGTACACATaGGGCCCATTCTTGCCACTC +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSRSWYT*GPFLPL
Trigger: GAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCT...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp TTCATCTCTAGCTTGAATGTCATCCACCCTATGAATCTGGCAGTCCAGGAAACTGCTCTTGACTCATGTTaGGTGCCACTGAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: FISSLNVIHPMNLAVQETALDSC*VPLNSG
Trigger: TCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGC...AGTTTCCTGGACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR TCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAAGCGACAGTTTCCTCTaGGATCATGGACGGATGCAG +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLSDSFL*DHGRMQ
Trigger: CTGCATCCGTCCATGATCTCAGAGGAAACTGTCGCT...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGCACAGGTCAGTGAGTaGTGCGATCCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLAQVSE*CDPFTS
Trigger: GGAAGTGAATGGATCGCAGCACTCACTGACCTGTGC...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AAATCATCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGCATGAGGCCCATTCTTaGCACTCTCCCTGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: KSSLSLTVSSVWVSYTSLHEAHS*HSPCSL
Trigger: TAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATG...CAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR GCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTGAGATCATGGACGGATaGAGTTGGGTGGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFEIMDG*SWVVAA
Trigger: TGCTGCTACCACCCAACTGCATCCGTCCATGATCTC...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAACATGGGAGGGGTCATaGCTCCTCTCACTCGTCAAA +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLTWEGS*LLSLVK
Trigger: TTTGACGAGTGAGAGGAGGCATGACCCCTCCCATGT...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp ACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAATCACCACAAAGTCATTaGCTCCTTCCCGATAGACGA +
Preference number: 4 (lower is better)
Translates to: TVPCPGISFLATGMLPTQSPQSH*LLPDRR
Trigger: TCGTCTATCGGGAAGGAGCCAATGACTTTGTGGTGA...TTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CCA 90 bp TGGGCTGACCCTGAGCAACTGGGTTCAATGTCAGGATTCCAGATTGGAGAGAAATCTTCCAAAGCTTTCTaGAGTGATGACTACATCCTC +
Preference number: 4 (lower is better)
Translates to: WADPEQLGSMSGFQIGEKSSKAF*SDDYIL
Trigger: GAGGATGTAGTCATCACTCCAGAAAGCTTTGGAAGA...TTTCTCTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGCATCTGCCCTTTGTaGTTCTGTGAACAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFSICPL*FCEQPG
Trigger: CCCTGGCTGTTCACAGAACCACAAAGGGCAGATGCT...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAAAAGCACAGGTCAGTaGGTGCTGCGATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFKSTGQ*VLRSIH
Trigger: GTGAATGGATCGCAGCACTCACTGACCTGTGCTTTT...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCATCCAGAGTCTTCTTATaGTCGGGGAGACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSSRVFL*SGRLGH
Trigger: ATGGCCCAGTCTCCCCGATCATAAGAAGACTCTGGA...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTATGTCATCCACCCTATaGATCTGGCAGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAMSSTL*IWQSRK
Trigger: TTTCCTGGACTGCCAGATTCATAGGGTGGATGACAT...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCATCCCAGCCAGGCATGTaGGGGATGAATCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSSQPGM*GMNLFQ
Trigger: TTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGA...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCCCTCCCTTCACTGTGTaGACAACTTGGACAAGTTAC +
Preference number: 4 (lower is better)
Translates to: QKCHLICIISRSSATYSSPPFTV*TTWTSY
Trigger: GTAACTTGTCCAAGTTGTTCACACAGTGAAGGGAGG...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTTGCACTTTGCTGAGCTaGCATTACTCAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AFLKQIPMETTLKEEAKACTLLS*HYSVAL
Trigger: CAAGGCAACTGAGTAATGTCAGCTCAGCAAAGTGCA...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGGAGTGTCAGCTTTGTaGTGGATAAATTCACATGCG +
Preference number: 4 (lower is better)
Translates to: QKVRFNCSLSWNIILGHWGVSAL*WINSHA
Trigger: CGCATGTGAATTTATCCAGCACAAAGCTGACACTCC...CCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTCATGAGGCCCATTCTTaGCACTCTCCCTGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSHEAHS*HSPCSL
Trigger: TAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATG...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CCA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGTGCCTATCAAGGAGGTaGAAGGAATGCTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQCLSRR*KECLWK
Trigger: CTTCCATAAGCATTCCTTCCACCTCCTTGATAGGCA...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CAA 72 bp AGAAAATGCAGGTGTGCACCTCTGAACAGCCCATACTaGGCTTTTCTGAAGCAAATTCCCATGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: RKCRCAPLNSPY*AFLKQIPMETT
Trigger: TGTGGTTTCCATGGGAATTTGCTTCAGAAAAGCCAAGTATGGGCTGTTCAGAGGTGCACACCTGCATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CAA 72 bp CGTATCTTGCAGAAAACCTTCCACTTCATCTCTAGCTaGAATGTCATCCACCCTATGAATCTGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RILQKTFHFISS*NVIHPMNLAVQ
Trigger: CTGGACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAAGTGGAAGGTTTTCTGCAAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp TCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACCAGTGTGTATGAAATaGATGAGAGTAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: STVPCPGISFLATGMLPTPVCMK*MRVRGR
Trigger: CCTTCCTCTTACTCTCATTCATTTCATACACACTGG...TGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR TCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAAGGATCCATCTCCCCTaGGCTATTATTGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLRIHLP*AIIDLW
Trigger: CCAGAGATCAATAATAGCTCAGGGGAGATGGATCCT...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp ACCTTCCACTTCATCTCTAGCTTGAATGTCATCCACCCTATGAATCTGGCAGTCGATTCTTCTAGTTGCTaGGGAAACGTATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: TFHFISSLNVIHPMNLAVDSSSC*GNVSCR
Trigger: TCTGCAAGATACGTTTCCTCAGCAACTAGAAGAATC...GACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAAGTGGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp ACCTTCCACTTCATCTCTAGCTTGAATGTCATCCACCCTATGAATCTGGCAGTCAGAAGCTGGACATGGTaGCATATGCTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TFHFISSLNVIHPMNLAVRSWTW*HMLLLD
Trigger: ATCAAGAAGAAGCATATGTCACCATGTCCAGCTTCT...GACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAAGTGGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCACATGTTGAGTGCCACTaGACTCAGGAAGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSHVECH*TQEEWS
Trigger: TGACCACTCTTCCTGAGTTCAGTGGCACTCAACATG...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000505093.1
CDS-3UTR TCA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTATGGGGCAGTCCTCAGTaGAGAGAAAGGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLWGSPQ*RERHMA
Trigger: AGCCATGTGCCTTTCTCTTCACTGAGGACTGCCCCA...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTAGTCATCCAGTTCTaGATCTTCCAAGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: KVRFNCSLSWNIILGHWDVVIQF*IFQVSI
Trigger: AATGGAGACTTGGAAGATGCAGAACTGGATGACTAC...ATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp CCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCAGGTCAGTGAGTGCTaGGATCCATTCACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PSYRMNQIPKGEVQLFLVQVSEC*DPFTSN
Trigger: GTTGGAAGTGAATGGATCGCAGCACTCACTGACCTG...GACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTGGAGTGTCAGCTTTGTaGTGGATAAATTCACATGCG +
Preference number: 4 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAGVSAL*WINSHA
Trigger: CGCATGTGAATTTATCCAGCACAAAGCTGACACTCC...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCAATCTCATACATTGCTaGCGGTTGGAGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QKCHLICIISRSSATYSSNLIHC*RLELSL
Trigger: CAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATT...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTCATTTTTGTGGCATTTaGCCTGTCTCCAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFHFCGI*PVSNRA
Trigger: TGCCCTGTTGGAGACAGGGCAAATGCCACAAAAATG...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp GTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATGGTGACATATGCTTCTCACCACAAAGTCATTaGCTCCTTCCCGATAGACGA +
Preference number: 4 (lower is better)
Translates to: VSYTSLVLVEAGHGDICFSPQSH*LLPDRR
Trigger: TCGTCTATCGGGAAGGAGCCAATGACTTTGTGGTGA...GAAGCATATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR CCA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTAGACTACATCCTCAGATaGGCAGTTGGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLDYILR*AVGALH
Trigger: GTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACAAACTGTTCCTTGTCCTaGAATATCATTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: STVPCPGISFLATGMLPTNCSLS*NIILGH
Trigger: GTGGCCAAGAATGATATTCCAGGACAAGGAACAGTT...TGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR TCA 90 bp GTGAGGGATGAATCTCTTCCAAAGCTTTCTGGAGTGATGACTACATCCTCAGATCCAGTGTGTATGAAATaGATGAGAGTAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VRDESLPKLSGVMTTSSDPVCMK*MRVRGR
Trigger: CCTTCCTCTTACTCTCATTCATTTCATACACACTGG...ATCTGAGGATGTAGTCATCACTCCAGAAAGCTTTGGAAGAGATTCATCCCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR TCA 90 bp TGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAACATCTCTTGTAGTTTCCTaGAATTCAGGCACTTTACCT +
Preference number: 4 (lower is better)
Translates to: CSLSWNIILGHWDVANTTSLVVS*NSGTLP
Trigger: AGGTAAAGTGCCTGAATTTCAGGAAACTACAAGAGA...TGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR TCA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGACATATGCTTCTTCTTaGTTTGATCCCAGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQTYASS*FDPREV
Trigger: TACTTCCCTGGGATCAAATCAAGAAGAAGCATATGT...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp CTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTAGAAGCTGGACATGGTaGCATATGCTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LTVSSVWVSYTSLVLVEARSWTW*HMLLLD
Trigger: ATCAAGAAGAAGCATATGTCACCATGTCCAGCTTCT...AGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCGCTCTTGACTCATGTTaGGTGCCACTGAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLALDSC*VPLNSG
Trigger: TCCTGAGTTCAGTGGCACTCAACATGAGTCAAGAGC...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAGAAGCAGGATGCTCTTaGCTCATGTTGAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLEAGCS*LMLSAT
Trigger: AGTGGCACTCAACATGAGTCAAGAGCATCCTGCTTC...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp ACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAATCAAATACCAAAAGGTaGGGTTCAACTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TVPCPGISFLATGMLPTQSNTKR*GSTVPC
Trigger: ACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGA...TTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AAGAATGGGCTGACCCTGAGCAACTGGGTTCAATGTCAGGATTCCAGATTGGAGCCTTCACACATATATTaGTCTTTCCAATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KNGLTLSNWVQCQDSRLEPSHIY*SFQSVR
Trigger: TCTTACTGATTGGAAAGAGCAATATATGTGTGAAGG...CTCCAATCTGGAATCCTGACATTGAACCCAGTTGCTCAGGGTCAGCCCATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR GCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGGTTGGAGCTTTCTCTaGAGGAGTGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFGWSFL*RSVSFV
Trigger: CACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGTTTAATCTCATACATTaGTGCCGGTTGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QKVRFNCSLSWNIILGHWFNLIH*CRLELS
Trigger: AGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAA...CCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTCATGCTCTCTTCCTaGCTTCCTCACTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLMLSS*LPHSSI
Trigger: GATTGAGGAGTGAGGAAGGCAGGAAGAGAGCATGAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CAA 72 bp GTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTaGGTAGAAGCTGGACATGGTGACATATGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSSVWVSYTSLV*VEAGHGDICFF
Trigger: GAAGAAGCATATGTCACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTCCAGTGTGTATGAAATaGATGAGAGTAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFPVCMK*MRVRGR
Trigger: CCTTCCTCTTACTCTCATTCATTTCATACACACTGG...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp GGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTTTGGTAGAAGCTGGACATCTCTTGTAGTTTCCTaGAATTCAGGCACTTTACCT +
Preference number: 4 (lower is better)
Translates to: GKFSLGFLHFTGFGRSWTSLVVS*NSGTLP
Trigger: AGGTAAAGTGCCTGAATTTCAGGAAACTACAAGAGA...TGTCCAGCTTCTACCAAAACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR TCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGAAGCTGGACATGGTaGCATATGCTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFRSWTW*HMLLLD
Trigger: ATCAAGAAGAAGCATATGTCACCATGTCCAGCTTCT...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTACCATGGAAACCACATTaGAGGAAGAGGCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLPWKPH*RKRQRL
Trigger: CAGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGG...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCCAGGTCAGTGAGTGCTaGGATCCATTCACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: IVFITAGAEESTLESKTFQVSEC*DPFTSN
Trigger: GTTGGAAGTGAATGGATCGCAGCACTCACTGACCTG...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp TTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACCTGGATAAATTCACATaGGTCCATTTGTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: FNCSLSWNIILGHWDVANLDKFT*VHLFSS
Trigger: GGATGAAAACAAATGGACGCATGTGAATTTATCCAG...GTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCTTTAATCTCATACATTaGTGCCGGTTGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QKCHLICIISRSSATYSSFNLIH*CRLELS
Trigger: AGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAA...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGACAGTCCTAGTTTTTaGTCATTGTCCCGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFDSPSF*SLSRRD
Trigger: ATCCCTCCGGGACAATGAGCAAAAACTAGGACTGTC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTCTGAATCAGCCTGGGTaGCCTAGACCCAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPLNQPG*PRPSHV
Trigger: AACATGACTGGGTCTAGGGCACCCAGGCTGATTCAG...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTTCACCACAAAGTCATTaGCTCCTTCCCGATAGACGA +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFSPQSH*LLPDRR
Trigger: TCGTCTATCGGGAAGGAGCCAATGACTTTGTGGTGA...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCAGATTGGAGAGAAAATaGAGGGGGCAGCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IVFITAGAEESTLESKTFRLERK*RGQRAV
Trigger: AACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCT...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGTTACTAGTGACGTTTaGCACTCAAGAATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFVTSDV*HSRMGQ
Trigger: CTGCCCCATTCTTGAGTGCCAAACGTCACTAGTAAC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCCCCAGTCATGTTTGTTaGACCAAATTAGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: QKCHLICIISRSSATYSSPSHVC*TKLAVF
Trigger: AAAGACAGCTAATTTGGTCCAACAAACATGACTGGG...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGCCACATATTCTTCCTaGCCCGTACCAAGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFATYSS*PVPSLL
Trigger: TAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CAA 72 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSS*SLTVSSVWVSY
Trigger: GTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTGTCTTCTCTGTGCTGTaGGGGAGACTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: RILELEISRCFSMVISSFVFSVL*GRLGTL
Trigger: TAGAGTTCCTAGTCTCCCTCACAGCACAGAGAAGAC...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTATCAGAGACCTGGCATaGGATTTTGTGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPIRDLA*DFVEPP
Trigger: AGGAGGCTCCACAAAATCTCATGCCAGGTCTCTGAT...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGGGACCCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCACCCTAGTTACAGGATaGATCAAATACCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RDPSYRMNQIPKGEVQLFTLVTG*IKYQKV
Trigger: CACCTTTTGGTATTTGATTCATCCTGTAACTAGGGT...GAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGGGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATCCTTCACACATATATTaGTCTTTCCAATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KVRFNCSLSWNIILGHWDPSHIY*SFQSVR
Trigger: TCTTACTGATTGGAAAGAGCAATATATGTGTGAAGG...ATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTCTGACATTACTCAGTTaGCTTGACTTTGAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFLTLLS*LDFELV
Trigger: GACTAACTCAAAGTCAAGGCAACTGAGTAATGTCAG...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTATTTATTACTGCTGGTaGAGAGGAGAGCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSIYYCW*RGEHFG
Trigger: TCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAAT...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTATGAAAAATGTCTTCTaGTGCCTACAAACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSMKNVF*CLQTRQ
Trigger: CTGCCTGGTTTGTAGGCAGCAGAAGACATTTTTCAT...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAAAGAAAATGCAGGTGTaGACCTCTGAACAGCCCATA +
Preference number: 4 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLKKMQV*TSEQPI
Trigger: TATGGGCTGTTCAGAGGTGCACACCTGCATTTTCTT...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTTACATTGCTGCCGGTTaGAGCTTTCTCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPYIAAG*SFLCRS
Trigger: ACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTA...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTATGGACGGATGCAGTTaGGTGGTAGCAGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RILELEISRCFSMVISSFMDGCS*VVAARE
Trigger: TTCTCTTGCTGCTACCACCCAACTGCATCCGTCCAT...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTAAGGTATCAGAGACCTaGCATGAGATTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFKVSET*HEILWS
Trigger: GCTCCACAAAATCTCATGCCAGGTCTCTGATACCTT...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTACATATGCTTCTTCTTaGTTTGATCCCAGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSTYASS*FDPREV
Trigger: TACTTCCCTGGGATCAAATCAAGAAGAAGCATATGT...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000505093.1
ENST00000514217.5
CDS-3UTR TCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTTCTCAAACAAAACCATaGACCTATGACCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFSQTKP*TYDPFS
Trigger: AGAGAAGGGGTCATAGGTTCATGGTTTTGTTTGAGA...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGTAGTCATCCAGTTCTaGATCTTCCAAGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFVVIQF*IFQVSI
Trigger: AATGGAGACTTGGAAGATGCAGAACTGGATGACTAC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp ATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATAATCTCATACATTGCTaGCGGTTGGAGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MNQIPKGEVQLFLVLEYHNLIHC*RLELSL
Trigger: CAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATT...ATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR GCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCCATTGTATTTATTACTaGTGGTGCAGAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLHCIYY*WCRGEH
Trigger: GTGCTCTCCTCTGCACCAGCAGTAATAAATACAATG...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTAAAAATGTCTTCTGCTaGCTACAAACCAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSKNVFC*LQTRQI
Trigger: AATCTGCCTGGTTTGTAGGCAGCAGAAGACATTTTT...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTAGAAGAGCTAAGAAAATaGAGGTGTGCACCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLEELRK*RCAPLN
Trigger: GTTCAGAGGTGCACACCTGCATTTTCTTAGCTCTTC...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp AATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTGTGTCAGCTTTGTGCTaGATAAATTCACATGCGTCC +
Preference number: 4 (lower is better)
Translates to: NQIPKGEVQLFLVLEYHSVSALC*INSHAS
Trigger: GGACGCATGTGAATTTATCCAGCACAAAGCTGACAC...AGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCTCTTCCAAAGCTTTCTaGAGTGATGACTACATCCTC +
Preference number: 4 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLSSKAF*SDDYIL
Trigger: GAGGATGTAGTCATCACTCCAGAAAGCTTTGGAAGA...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAACGGTAAGTTCAGTCTaGGTTTCTTACACTTCACTG +
Preference number: 4 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLTVSSV*VSYTSL
Trigger: CAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGT...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp AATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTATCATTCTTGGCCACTaGGATGTTGCCAACACAACA +
Preference number: 4 (lower is better)
Translates to: NQIPKGEVQLFLVLEYHSIILGH*DVANTT
Trigger: TGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGAT...AGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CCA 90 bp ATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATCTGGAATATCATTCTTaGCCACTGGGATGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: MNQIPKGEVQLFLVLEYHLEYHS*PLGCCQ
Trigger: TTGGCAACATCCCAGTGGCCAAGAATGATATTCCAG...ATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGGTATTTGATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
3UTR CAA 72 bp TTGTCAGGATGGAGTGAGACAAGGTGCGCAGAGCACTaGCAAAGCACTGGATATATATTAAATCCTAATAAT +
Preference number: 4 (lower is better)
Translates to: LSGWSETRCAEH*QSTGYILNPNN
Trigger: ATTATTAGGATTTAATATATATCCAGTGCTTTGCAAGTGCTCTGCGCACCTTGTCTCACTCCATCCTGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTCCTATTTGAGACTTaGCTCCCATTTCTACAAAAG +
Preference number: 4 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLLFET*LPFLQK
Trigger: CTTTTGTAGAAATGGGAGTCAAGTCTCAAATAGGAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGGCAGTTTACACTTCTaGTTAATACATTGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFGSLHF*LIHCLR
Trigger: TCGGAGACAATGTATTAATCAGAAGTGTAAACTGCC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCCATACTTGGCTTTTCTaGAGCAAATTCCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLHTWLF*SKFPWK
Trigger: TTTCCATGGGAATTTGCTTCAGAAAAGCCAAGTATG...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTGGTGCGCAGAGCACTTaGAAAGCACTGGATATATAT +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPGAQST*KALDIY
Trigger: ATATATATCCAGTGCTTTGCAAGTGCTCTGCGCACC...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTTTTCTGTGCAGCATCTaGCCTTTGTGGTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPFLCSI*PLWFCE
Trigger: TTCACAGAACCACAAAGGGCAGATGCTGCACAGAAA...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGAATGCTTATGGAAGTaGTTTGAAAATTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLECLWK*FENCKS
Trigger: GCTTTTGCAATTTTCAAAGCACTTCCATAAGCATTC...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCAGGAGGTGGAAGGAATaGTTATGGAAGTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IVFITAGAEESTLESKTFRRWKE*LWKCFE
Trigger: TTCAAAGCACTTCCATAAGCATTCCTTCCACCTCCT...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTAAGGTAAAGAACACCTaGCCACTGATGAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFKVKNT*PLMKNV
Trigger: GACATTTTTCATCAGTGGGCAGGTGTTCTTTACCTT...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp AGTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTTATACTAAGCAGCTCTaGGAAATGTTTGTAATGCAT +
Preference number: 4 (lower is better)
Translates to: SLWQPLLLENLGQFRDEFYTKQL*EMFVMH
Trigger: ATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA...AAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCTGGCATGAGATTTTGTaGAGCCTCCTATTTGAGACT +
Preference number: 4 (lower is better)
Translates to: IVFITAGAEESTLESKTFWHEIL*SLLFET
Trigger: AGTCTCAAATAGGAGGCTCCACAAAATCTCATGCCA...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
3UTR CAA 72 bp ATGCAGTTGGGTGGTAGCAGCAAGAGAATCACTGTCTaGGTAACAAACAAGAGAAATTGTGAGTTTCTAATT +
Preference number: 4 (lower is better)
Translates to: MQLGGSSKRITV*VTNKRNCEFLI
Trigger: AATTAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCTACCACCCAACTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTGATTCTTCTAGTTGCTaGGGAAACGTATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPDSSSC*GNVSCR
Trigger: TCTGCAAGATACGTTTCCTCAGCAACTAGAAGAATC...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp CTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTCACCTTCACACATATATTaGTCTTTCCAATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LGTLDFPFKSSLSLTVSSPSHIY*SFQSVR
Trigger: TCTTACTGATTGGAAAGAGCAATATATGTGTGAAGG...TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000514217.5
CDS-3UTR GCA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTGGATAAATTCACATaGGTCCATTTGTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLDKFT*VHLFSS
Trigger: GGATGAAAACAAATGGACGCATGTGAATTTATCCAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR GCA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCAATGTTTCAGAATCTTaGAGACTGTGTAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: IVFITAGAEESTLESKTFNVSES*RLCSGV
Trigger: AACCCCACTACACAGTCTGCAAGATTCTGAAACATT...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTATTTCCTAATAAAATCTaGAAGGAGATTGGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLFPNKI*KEIGQN
Trigger: GTTCTGCCCAATCTCCTTTCAGATTTTATTAGGAAA...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTGGGATGAATTTAGGTTaGGGTAGTGTCTATACACAT +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPGMNLG*GSVYTH
Trigger: ATGTGTATAGACACTACCCCAACCTAAATTCATCCC...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR TCA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTAAGAATAAGATGGTCTaGTCTTACCAGTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPKNKMV*SYQSFK
Trigger: CTTAAAGGACTGGTAAGATCAGACCATCTTATTCTT...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CCA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTACAAACTGACTCAGTTTaGATCATAAATTATCTAGGC +
Preference number: 4 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLQTDSV*IINYLG
Trigger: GCCTAGATAATTTATGATCCAAACTGAGTCAGTTTG...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCCCCAGCCATCATATCTaGGCCCCTCCCTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: FQELCHIFFLARTKSLSPPSHHI*APPFTV
Trigger: CACAGTGAAGGGAGGGGCCAAGATATGATGGCTGGG...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GGTCCTGGTACACATGAGGCCCATTCTTGCCACTCTCCCTGCAGTCTAGGGACCAGAAGCAGGATGCTCTaGACTCATGTTGAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: GPGTHEAHSCHSPCSLGTRSRML*THVECH
Trigger: GTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCT...GGTCCCTAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATGTGTACCAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR CAA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCATACATTGCTGCCGGTaGGAGCTTTCTCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: FQELCHIFFLARTKSLSPIHCCR*ELSLQE
Trigger: CTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTAT...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GGAGGTCCTGGTACACATGAGGCCCATTCTTGCCACTCTCCCTGCAGTCTAGGGCTGTGTAGTGGGGTTTaGCTAATTTTGTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GGPGTHEAHSCHSPCSLGLCSGV*LILSSL
Trigger: CAGAGAAGACAAAATTAGCAAAACCCCACTACACAG...CCCTAGACTGCAGGGAGAGTGGCAAGAATGGGCCTCATGTGTACCAGGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR CAA 90 bp TTCCAGGAGCTCTGCCACATATTCTTCCTGGCCCGTACCAAGTCTCTTAGCCCCTCCCCTGAGCTATTATaGATCTCTGGAGTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: FQELCHIFFLARTKSLSPSPELL*ISGVLK
Trigger: CTTCAGAACTCCAGAGATCAATAATAGCTCAGGGGA...GGGGCTAAGAGACTTGGTACGGGCCAGGAAGAATATGTGGCAGAGCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp CAGCGTGCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATGAGGCTGAGGAAACGTATCTaGCAGAAAACCTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: QRAVCSPKAKQEVLVHMRLRKRI*QKTFHF
Trigger: GAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAG...CCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGCACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CAA 90 bp GACTACATCCTCAGATGGGCAGTTGGGGCTCTGCACATCCCCTCCAAGCCTCTGAATCCTGAGCTATTATaGATCTCTGGAGTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: DYILRWAVGALHIPSKPLNPELL*ISGVLK
Trigger: CTTCAGAACTCCAGAGATCAATAATAGCTCAGGATT...CAGAGGCTTGGAGGGGATGTGCAGAGCCCCAACTGCCCATCTGAGGATGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS-3UTR CAA 90 bp AAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGAATACATTGCTGCCGGTaGGAGCTTTCTCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KGEVQLFLVLEYHSWPLGIHCCR*ELSLQE
Trigger: CTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTAT...TCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp GTCAGGATTCCAGATTGGAGAGAAAATGGAGGGGGCAGCGTGCTGTTTGTAGTCTACACTTCACTGGTTTaGGTAGAAGCTGGACATGGT +
Preference number: 5 (lower is better)
Translates to: VRIPDWRENGGGSVLFVVYTSLV*VEAGHG
Trigger: ACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTA...GACTACAAACAGCACGCTGCCCCCTCCATTTTCTCTCCAATCTGGAATCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CAA 90 bp CATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGCTTTCCAGATTGGTGATGTaGACATCTGGGTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HALTFPARHVRDESLPKLSRLVM*TSGSSK
Trigger: TTTTGAGGACCCAGATGTCAACATCACCAATCTGGA...AAGCTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR CAA 90 bp TCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGTACACTTCACTGGTTTaGGTAGAAGCTGGACATGGT +
Preference number: 5 (lower is better)
Translates to: SHALTFPARHVRDESLPKYTSLV*VEAGHG
Trigger: ACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTA...CTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CAA 90 bp GCTGTTTGTAGTCCCAAGGCTAAGCAGGAGGTCCTGGTACACATGAGGCCCATTCCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: AVCSPKAKQEVLVHMRPIPFKSS*SLTVSS
Trigger: TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGG...AATGGGCCTCATGTGTACCAGGACCTCCTGCTTAGCCTTGGGACTACAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CAA 90 bp CCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGCCTGGAATATCATTCTaGGCCACTGGGATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: PKGEVQLFLVLEYHSWPLPGISF*ATGMLP
Trigger: TGGCAACATCCCAGTGGCCAAGAATGATATTCCAGG...CAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTCATGGACGGATGCAGTaGGGTGGTAGCAGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSHGRMQ*GGSSKR
Trigger: TCTCTTGCTGCTACCACCCAACTGCATCCGTCCATG...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTCTGTGGGAGATGGGTTaGCTGCACTTTGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSLWEMG*LHFAEL
Trigger: CAGCTCAGCAAAGTGCAGCAAACCCATCTCCCACAG...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AGCAGCAAGAGAATCACTGTCTTGGTAACAAACAAGAGAAATTGTGAGTTTCTAGTGAACAGCCAGGGTTaGGAGGCCTGTGGGAGATGG +
Preference number: 5 (lower is better)
Translates to: SSKRITVLVTNKRNCEFLVNSQG*EACGRW
Trigger: CCATCTCCCACAGGCCTCCAAACCCTGGCTGTTCAC...TAGAAACTCACAATTTCTCTTGTTTGTTACCAAGACAGTGATTCTCTTGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTATGCAGCATCTGCCCTTaGTGGTTCTGTGAACAGCCA +
Preference number: 5 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLCSICP*WFCEQP
Trigger: TGGCTGTTCACAGAACCACAAAGGGCAGATGCTGCA...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GGTAAAGAACACCTGCCCACTGATGAAAAATGTCTTCTGCTGCCTACAAACCAGACCTGGCATGAGATTTaGTGGAGCCTCCTATTTGAG +
Preference number: 5 (lower is better)
Translates to: GKEHLPTDEKCLLLPTNQTWHEI*WSLLFE
Trigger: CTCAAATAGGAGGCTCCACAAAATCTCATGCCAGGT...CTGGTTTGTAGGCAGCAGAAGACATTTTTCATCAGTGGGCAGGTGTTCTTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAACACTTGGCCACTGGGATGTaGCCAACACAACACTTTTTA +
Preference number: 5 (lower is better)
Translates to: VPCPGISFLATGMLPTQHLATGM*PTQHFL
Trigger: TAAAAAGTGTTGTGTTGGCAACATCCCAGTGGCCAA...GTGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS TCA 90 bp GAATCTGAGCTTATAAAGGATGTTGTGAGTGGTCAAGGAGGAGAGTaGAATGATGGGTCTTATTCAGGTGAGTTAGGCACTGCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: ESELIKDVVSGQGGE*NDGSYSGELGTAQD
Trigger: ATCCTGGGCAGTGCCTAACTCACCTGAATAAGACCCATCATTTCACTCTCCTCCTTGACCACTCACAACATCCTTTATAAGCTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509668.1
CDS GCA 90 bp GATCGAACTTTAATCTCATACATTGCTGCCGGTTGGAGCTTTCTCTaGAGGAGTGTCAGCTTTGTGCTGGATAAATTCACATGCGTCCAT +
Preference number: 5 (lower is better)
Translates to: DRTLISYIAAGWSFL*RSVSFVLDKFTCVH
Trigger: ATGGACGCATGTGAATTTATCCAGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000506850.5
CDS GCA 90 bp AAAATAGTGATCAGGGATGGATCGAACTTTAATCTCATACATTGCTaGCGGTTGGAGCTTTCTCTGCAGGAGTGTCAGCTTTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: KIVIRDGSNFNLIHC*RLELSLQECQLCAG
Trigger: TCCAGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATCCATCCCTGATCACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS-3UTR CAA 90 bp CCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGTTCCAAGTCTCCATTTaGAGCATAGCCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: PKGEVQLFLVLEYHSWPLFQVSI*SIATFS
Trigger: GGAGAAAGTGGCTATGCTCAAAATGGAGACTTGGAA...CAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp CAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGTCCAGATTGGTGATGTaGACATCTGGGTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: QKVRFNCSLSWNIILGHWSRLVM*TSGSSK
Trigger: TTTTGAGGACCCAGATGTCAACATCACCAATCTGGA...CCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp GTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAACACTTCACATGCGTCCATTaGTTTTCATCCTTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VPCPGISFLATGMLPTQHFTCVH*FSSFSW
Trigger: CCAGGAAAAGGATGAAAACAAATGGACGCATGTGAA...GTGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp CATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGCTTAAACCATGCCAAAAGTaGTACCTAGAATTGTCATTC +
Preference number: 5 (lower is better)
Translates to: HALTFPARHVRDESLPKLKPCQK*YLELSF
Trigger: GAATGACAATTCTAGGTACAACTTTTGGCATGGTTT...AAGCTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR CAA 90 bp TCACATGCACTGACATTCCCAGCCAGGCATGTGAGGGATGAATCTCTTCCAAAGACCTTCACACATATATaGCTCTTTCCAATCAGTAAG +
Preference number: 5 (lower is better)
Translates to: SHALTFPARHVRDESLPKTFTHI*LFPISK
Trigger: CTTACTGATTGGAAAGAGCAATATATGTGTGAAGGT...CTTTGGAAGAGATTCATCCCTCACATGCCTGGCTGGGAATGTCAGTGCATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514217.5
CDS-3UTR CAA 90 bp GCTTTTCTGAAGCAAATTCCCATGGAAACCACATTGAAGGAAGAGGCAAAGGCTGCAGGAGTGTCAGCTTaGTGCTGGATAAATTCACAT +
Preference number: 5 (lower is better)
Translates to: AFLKQIPMETTLKEEAKAAGVSA*CWINSH
Trigger: ATGTGAATTTATCCAGCACAAAGCTGACACTCCTGC...AGCCTTTGCCTCTTCCTTCAATGTGGTTTCCATGGGAATTTGCTTCAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp CAAAAATGCCACCTAATCTGCATCATTTCCAGGAGCTCTGCCACATATTCTTCCCACTTCATCTCTAGCTaGAATGTCATCCACCCTATG +
Preference number: 5 (lower is better)
Translates to: QKCHLICIISRSSATYSSHFISS*NVIHPM
Trigger: CATAGGGTGGATGACATTCAAGCTAGAGATGAAGTG...GGAAGAATATGTGGCAGAGCTCCTGGAAATGATGCAGATTAGGTGGCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TCATCTTTGTCGCTCACGGTAAGTTCAGTCTGGGTTTCTTACACTTCACTGGTTCTGAGGAAACGTATCTaGCAGAAAACCTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: SSLSLTVSSVWVSYTSLVLRKRI*QKTFHF
Trigger: GAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAG...AACCAGTGAAGTGTAAGAAACCCAGACTGAACTTACCGTGAGCGACAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CAA 90 bp TTCATCTCTAGCTTGAATGTCATCCACCCTATGAATCTGGCAGTCCAGGAAACTGGGGTTTTGCTAATTTaGTCTTCTCTGTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: FISSLNVIHPMNLAVQETGVLLI*SSLCCE
Trigger: CTCACAGCACAGAGAAGACAAAATTAGCAAAACCCC...AGTTTCCTGGACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505093.1
CDS TCA 90 bp CTCACTTTTCTTGGTTTCTTACAAAGATGTTCCAGAGTCTTCTTATaGTCGGGGAGACTGGGCCATACGATAGGCTTAATCCTGAGCTAT +
Preference number: 5 (lower is better)
Translates to: LTFLGFLQRCSRVFL*SGRLGHTIGLILSY
Trigger: ATAGCTCAGGATTAAGCCTATCGTATGGCCCAGTCTCCCCGATCATAAGAAGACTCTGGAACATCTTTGTAAGAAACCAAGAAAAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS GCA 90 bp TTTAAAATAGTGATCAGGGATGGATCGAACTTTAATCTCATACATTaGTGCCGGTTGGAGCTTTCTCTGCAGGAGTGTCAGCTTTGTGCT +
Preference number: 5 (lower is better)
Translates to: FKIVIRDGSNFNLIH*CRLELSLQECQLCA
Trigger: AGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATCCATCCCTGATCACTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS CCA 90 bp GTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCACTaGGATGTTGCCAACACAACACTTTTTAAGCACCAAAAACACTCA +
Preference number: 5 (lower is better)
Translates to: VRFNCSLSWNIILGH*DVANTTLFKHQKHS
Trigger: TGAGTGTTTTTGGTGCTTAAAAAGTGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTATTCCAAGTCTCCATTTaGAGCATAGCCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLFQVSI*SIATFS
Trigger: GGAGAAAGTGGCTATGCTCAAAATGGAGACTTGGAA...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AGGGACCCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCGCAGGAGTGTCAGCTTaGTGCTGGATAAATTCACAT +
Preference number: 5 (lower is better)
Translates to: RDPSYRMNQIPKGEVQLFAGVSA*CWINSH
Trigger: ATGTGAATTTATCCAGCACAAAGCTGACACTCCTGC...GAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTAAGAAGCAGGATGCTCTaGACTCATGTTGAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLRSRML*THVECH
Trigger: GTGGCACTCAACATGAGTCAAGAGCATCCTGCTTCT...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTATTGTGGCAGCCTCTATaGCTGGAGAACTTGGGACAA +
Preference number: 5 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLWQPL*LENLGQ
Trigger: TTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAA...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AGACTAGGAACTCTAGACTTCCCTTTTAAATCATCTTTGTCGCTCACGGTAAGTTGTGGAGCCTCCTATTaGAGACTTGACTCCCATTTC +
Preference number: 5 (lower is better)
Translates to: RLGTLDFPFKSSLSLTVSCGASY*RLDSHF
Trigger: GAAATGGGAGTCAAGTCTCAAATAGGAGGCTCCACA...ACTTACCGTGAGCGACAAAGATGATTTAAAAGGGAAGTCTAGAGTTCCTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TGTTCCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTTGCCAACACAACAAATCCTGAGCTATTATaGATCTCTGGAGTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: CSLSWNIILGHWDVANTTNPELL*ISGVLK
Trigger: CTTCAGAACTCCAGAGATCAATAATAGCTCAGGATT...TGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS TCA 90 bp GCTCTGATACGTAAAGGAGTCAACAGCAAAATTAGGGACAGAATCTaGGCTTATAAAGGATGTTGTGAGTGGTCAAGGAGGAGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: ALIRKGVNSKIRDRI*AYKGCCEWSRRRVK
Trigger: TTTCACTCTCCTCCTTGACCACTCACAACATCCTTTATAAGCTCAGATTCTGTCCCTAATTTTGCTGTTGACTCCTTTACGTATCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509668.1
CDS-3UTR CAA 90 bp TTCATCTCTAGCTTGAATGTCATCCACCCTATGAATCTGGCAGTCCAGGAAACTCCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: FISSLNVIHPMNLAVQETPFKSS*SLTVSS
Trigger: TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGG...AGTTTCCTGGACTGCCAGATTCATAGGGTGGATGACATTCAAGCTAGAGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505093.1
ENST00000514217.5
CDS-3UTR CAA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCCACCTCCCAGGATTATaGTCAGGATGGAGTGAGACA +
Preference number: 5 (lower is better)
Translates to: IVFITAGAEESTLESKTFHLPGL*SGWSET
Trigger: TGTCTCACTCCATCCTGACAATAATCCTGGGAGGTG...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCTCCAGATTGGTGATGTaGACATCTGGGTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLSRLVM*TSGSSK
Trigger: TTTTGAGGACCCAGATGTCAACATCACCAATCTGGA...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTGAGGAAACGTATCTaGCAGAAAACCTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLRKRI*QKTFHF
Trigger: GAAGTGGAAGGTTTTCTGCAAGATACGTTTCCTCAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AATAATACGTCTCTTCCGTATATCTTCAAGATTGTAGCCACAGTCAGTTCACTCTACACTTCACTGGTTTaGGTAGAAGCTGGACATGGT +
Preference number: 5 (lower is better)
Translates to: NNTSLPYIFKIVATVSSLYTSLV*VEAGHG
Trigger: ACCATGTCCAGCTTCTACCAAAACCAGTGAAGTGTA...GAGTGAACTGACTGTGGCTACAATCTTGAAGATATACGGAAGAGACGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTACCTTTTAAATCATCTTaGTCGCTCACGGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLPFKSS*SLTVSS
Trigger: TGAACTTACCGTGAGCGACAAAGATGATTTAAAAGG...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTGGGGTTTTGCTAATTTaGTCTTCTCTGTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFGVLLI*SSLCCE
Trigger: CTCACAGCACAGAGAAGACAAAATTAGCAAAACCCC...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTTCTTTACCTTCTTTaGACATGGCTGGTCATGGGA +
Preference number: 5 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLLYLL*TWLVMG
Trigger: TCCCATGACCAGCCATGTCAAAAGAAGGTAAAGAAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTACAGTCAGTTCACTCATaGCATGTACTTGTAACTCTT +
Preference number: 5 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLQSVHS*HVLVTL
Trigger: AAGAGTTACAAGTACATGCAATGAGTGAACTGACTG...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAAAACCATGCCAAAAGTaGTACCTAGAATTGTCATTC +
Preference number: 5 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLKPCQK*YLELSF
Trigger: GAATGACAATTCTAGGTACAACTTTTGGCATGGTTT...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp ATACCAAAAGGTGAGGTTCAACTGTTCCTTGTCCTGGAATATCATTCTTGGCCAAAACCATGCCAAAAGTaGTACCTAGAATTGTCATTC +
Preference number: 5 (lower is better)
Translates to: IPKGEVQLFLVLEYHSWPKPCQK*YLELSF
Trigger: GAATGACAATTCTAGGTACAACTTTTGGCATGGTTT...TGGCCAAGAATGATATTCCAGGACAAGGAACAGTTGAACCTCACCTTTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp AGGGACCCTAGTTACAGGATGAATCAAATACCAAAAGGTGAGGTTCAACTGTTCACCTTCACACATATATaGCTCTTTCCAATCAGTAAG +
Preference number: 5 (lower is better)
Translates to: RDPSYRMNQIPKGEVQLFTFTHI*LFPISK
Trigger: CTTACTGATTGGAAAGAGCAATATATGTGTGAAGGT...GAACAGTTGAACCTCACCTTTTGGTATTTGATTCATCCTGTAACTAGGGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS-3UTR CAA 90 bp TATACTAAGCAGCTCTGCGAAATGTTTGTAATGCATGTGGATAGTACACGGTTACTGTGTAGTGGGGTTTaGCTAATTTTGTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: YTKQLCEMFVMHVDSTRLLCSGV*LILSSL
Trigger: CAGAGAAGACAAAATTAGCAAAACCCCACTACACAG...TAACCGTGTACTATCCACATGCATTACAAACATTTCGCAGAGCTGCTTAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp CTAGTTTTTGCTCATTGTCCCGGAGGGATTATATGTAAGTTTCCCTTTCACTTTCTATTGCTGGAGAACTaGGGACAATTTAGGGATGAA +
Preference number: 5 (lower is better)
Translates to: LVFAHCPGGIICKFPFHFLLLEN*GQFRDE
Trigger: TTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAG...AAAGTGAAAGGGAAACTTACATATAATCCCTCCGGGACAATGAGCAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp GTTTGTGGCAGCCTCTATTGCTGGAGAACTTGGGACAATTTAGGGATGAATTTAGCTTATGGAAGTGCTTaGAAAATTGCAAAAGCACTA +
Preference number: 5 (lower is better)
Translates to: VCGSLYCWRTWDNLGMNLAYGSA*KIAKAL
Trigger: TAGTGCTTTTGCAATTTTCAAAGCACTTCCATAAGC...TAAATTCATCCCTAAATTGTCCCAAGTTCTCCAGCAATAGAGGCTGCCACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp AGGATTTTAGAGCTGGAGATATCTCGATGTTTTTCTATGGTCATCTCTTCATTTGCAGAGGAGAGCACTTaGGAAAGTAAAACATTCACC +
Preference number: 5 (lower is better)
Translates to: RILELEISRCFSMVISSFAEEST*ESKTFT
Trigger: GGTGAATGTTTTACTTTCCAAAGTGCTCTCCTCTGC...AAATGAAGAGATGACCATAGAAAAACATCGAGATATCTCCAGCTCTAAAATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTTTCACATGCGTCCATTaGTTTTCATCCTTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPFTCVH*FSSFSW
Trigger: CCAGGAAAAGGATGAAAACAAATGGACGCATGTGAA...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp ATTGTATTTATTACTGCTGGTGCAGAGGAGAGCACTTTGGAAAGTAAAACATTCCTTCTGATTAATACATaGTCTCCGATCAGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: IVFITAGAEESTLESKTFLLINT*SPIRRF
Trigger: AAACCTCCTGATCGGAGACAATGTATTAATCAGAAG...GAATGTTTTACTTTCCAAAGTGCTCTCCTCTGCACCAGCAGTAATAAATACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS-3UTR CAA 90 bp TTCAGAAAAATGAAACCAAATGGGCTTCATGGCTTTTTCTTGACTTCTTTACCTACCTTCACACATATATaGCTCTTTCCAATCAGTAAG +
Preference number: 5 (lower is better)
Translates to: FRKMKPNGLHGFFLTSLPTFTHI*LFPISK
Trigger: CTTACTGATTGGAAAGAGCAATATATGTGTGAAGGT...AGGTAAAGAAGTCAAGAAAAAGCCATGAAGCCCATTTGGTTTCATTTTTCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303115.8
CDS CAA 90 bp ACCTCCACGAGGGCCCCACATATTTCAAATTCCAGATTGGTGATGTaGACATCTGGGTCCTCAAAAGCACAGGTCAGTGAGTGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: TSTRAPHISNSRLVM*TSGSSKAQVSECCD
Trigger: ATCGCAGCACTCACTGACCTGTGCTTTTGAGGACCCAGATGTCAACATCACCAATCTGGAATTTGAAATATGTGGGGCCCTCGTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000511031.1
ENST00000511982.1
ENST00000514217.5
CDS TCA 72 bp GATGTTGACATCTGGGTCCTCAAAAGCACAGGTCAGTaGGTGCTGCGATCCATTCACTTCCAACTGGCTATA +
Preference number: 6 (lower is better)
Translates to: DVDIWVLKSTGQ*VLRSIHFQLAI
Trigger: TATAGCCAGTTGGAAGTGAATGGATCGCAGCACTCACTGACCTGTGCTTTTGAGGACCCAGATGTCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000511031.1
ENST00000511982.1
ENST00000514217.5
CDS GCA 72 bp GTGATCAGGGATGGATCGAACTTTAATCTCATACATTaGTGCCGGTTGGAGCTTTCTCTGCAGGAGTGTCAG +
Preference number: 6 (lower is better)
Translates to: VIRDGSNFNLIH*CRLELSLQECQ
Trigger: CTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATCCATCCCTGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS GCA 72 bp ATCAGGGATGGATCGAACTTTAATCTCATACATTGCTaGCGGTTGGAGCTTTCTCTGCAGGAGTGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: IRDGSNFNLIHC*RLELSLQECQL
Trigger: AAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATCCATCCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS CCA 72 bp ATGGATCGAACTTTAATCTCATACATTGCTGCCGGTTaGAGCTTTCTCTGCAGGAGTGTCAGCTTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: MDRTLISYIAAG*SFLCRSVSFVL
Trigger: CAGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS CAA 72 bp AGGGCCCCACATATTTCAAATTCCAGATTGGTGATGTaGACATCTGGGTCCTCAAAAGCACAGGTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: RAPHISNSRLVM*TSGSSKAQVSE
Trigger: CTCACTGACCTGTGCTTTTGAGGACCCAGATGTCAACATCACCAATCTGGAATTTGAAATATGTGGGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000511031.1
ENST00000511982.1
ENST00000514217.5
CDS CAA 72 bp CTGCCGGTTGGAGCTTTCTCTGCAGGAGTGTCAGCTTaGTGCTGGATAAATTCACATGCGTCCATTTGTTTT +
Preference number: 6 (lower is better)
Translates to: LPVGAFSAGVSA*CWINSHASICF
Trigger: AAAACAAATGGACGCATGTGAATTTATCCAGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303115.8
ENST00000506850.5
CDS CAA 72 bp GATGGATCGAACTTTAATCTCATACATTGCTGCCGGTaGGAGCTTTCTCTGCAGGAGTGTCAGCTTTGTGCT +
Preference number: 6 (lower is better)
Translates to: DGSNFNLIHCCR*ELSLQECQLCA
Trigger: AGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAAAGTTCGATCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS GCA 72 bp TTAATCTCATACATTGCTGCCGGTTGGAGCTTTCTCTaGAGGAGTGTCAGCTTTGTGCTGGATAAATTCACA +
Preference number: 6 (lower is better)
Translates to: LISYIAAGWSFL*RSVSFVLDKFT
Trigger: TGTGAATTTATCCAGCACAAAGCTGACACTCCTGCAGAGAAAGCTCCAACCGGCAGCAATGTATGAGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303115.8
ENST00000506850.5
ENST00000509668.1
CDS TCA 72 bp CTTATAAAGGATGTTGTGAGTGGTCAAGGAGGAGAGTaGAATGATGGGTCTTATTCAGGTGAGTTAGGCACT +
Preference number: 6 (lower is better)
Translates to: LIKDVVSGQGGE*NDGSYSGELGT
Trigger: AGTGCCTAACTCACCTGAATAAGACCCATCATTTCACTCTCCTCCTTGACCACTCACAACATCCTTTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509668.1
CDS TCA 72 bp CGTAAAGGAGTCAACAGCAAAATTAGGGACAGAATCTaGGCTTATAAAGGATGTTGTGAGTGGTCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: RKGVNSKIRDRI*AYKGCCEWSRR
Trigger: CCTCCTTGACCACTCACAACATCCTTTATAAGCTCAGATTCTGTCCCTAATTTTGCTGTTGACTCCTTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509668.1
CDS CAA 72 bp CCTTGTCCTGGAATATCATTCTTGGCCACTGGGATGTaGCCAACACAACACTTTTTAAGCACCAAAAACACT +
Preference number: 6 (lower is better)
Translates to: PCPGISFLATGM*PTQHFLSTKNT
Trigger: AGTGTTTTTGGTGCTTAAAAAGTGTTGTGTTGGCAACATCCCAGTGGCCAAGAATGATATTCCAGGACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506850.5
CDS CAA 72 bp GAGTGCAGTTACATTCTTAGGATGGGAAAAGAGGTGTaGCCTAAATCTCCCAAATCATTTCAATTGGGATTC +
Preference number: 6 (lower is better)
Translates to: ECSYILRMGKEV*PKSPKSFQLGF
Trigger: GAATCCCAATTGAAATGATTTGGGAGATTTAGGCAACACCTCTTTTCCCATCCTAAGAATGTAACTGCACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509668.1