RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL6ST (Homo sapiens)

Ensembl gene IDs: ENSG00000134352

Ensembl transcript IDs: ENST00000336909.9, ENST00000381287.8, ENST00000381293.6, ENST00000381294.7, ENST00000381298.7, ENST00000423954.3, ENST00000502326.7, ENST00000503773.6, ENST00000506241.1, ENST00000522633.2, ENST00000651614.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTaGGCTTCCTGCTGCTTTCACACATTCTTCTTTTTCTACCTCAGT +
Preference number: 1 (lower is better)
Translates to: QQQQDSSCSPCFRVG*ASCCFHTFFFFYLS
Trigger: ACTGAGGTAGAAAAAGAAGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTaGCTGAGCTTCCTGCTGCTTTCACACATTCTTCTTTTTCTACCT +
Preference number: 1 (lower is better)
Translates to: RSAATGLKLFTLLSS*LSFLLLSHILLFLP
Trigger: AGGTAGAAAAAGAAGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR GCA 90 bp TCAAAAGGAGGATATAGCTGGTACAGGGCTAAGAACTTTAGGAGCTaGTCAATGGGCATGAGGAGTGGCACGAGTAGGAATAAACTAAAA +
Preference number: 1 (lower is better)
Translates to: SKGGYSWYRAKNFRS*SMGMRSGTSRNKLK
Trigger: TTTTAGTTTATTCCTACTCGTGCCACTCCTCATGCCCATTGAGCAGCTCCTAAAGTTCTTAGCCCTGTACCAGCTATATCCTCCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651614.1
3UTR CCA 90 bp TGGCTTCAATTTCTCCTTGAGCATTTTTCAAAAGGAGGATATAGCTaGTACAGGGCTAAGAACTTTAGGAGCTGCTCAATGGGCATGAGG +
Preference number: 1 (lower is better)
Translates to: WLQFLLEHFSKGGYS*YRAKNFRSCSMGMR
Trigger: CCTCATGCCCATTGAGCAGCTCCTAAAGTTCTTAGCCCTGTACCAGCTATATCCTCCTTTTGAAAAATGCTCAAGGAGAAATTGAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651614.1
3UTR CCA 90 bp TTCAATTTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTAC +
Preference number: 1 (lower is better)
Translates to: FNFSLSKLWGSKSEF*TILPTFICVCCHSY
Trigger: GTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR TCA 90 bp TTAAATAGGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTGATAACACACACCACTCAAGTATAT +
Preference number: 1 (lower is better)
Translates to: LNRCDARYHLLVASL*YRVLYLITHTTQVY
Trigger: ATATACTTGAGTGGTGTGTGTTATCAGATAAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR CCA 90 bp AGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTaGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTT +
Preference number: 1 (lower is better)
Translates to: RWSLFKVCLYGFRAS*SISIYWSNCYQIAF
Trigger: AAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR CCA 90 bp ATGTACAATGTGTCACTAGTCAAAGAGGACAATGTATATTCTGTGTaGGAAGAATCCACATTCACAGCAGTTTCATTTCCAATGATGGTT +
Preference number: 1 (lower is better)
Translates to: MYNVSLVKEDNVYSV*EESTFTAVSFPMMV
Trigger: AACCATCATTGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCTCTTTGACTAGTGACACATTGTACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCCTTCCATATCGCACGTaGTGGTTAGGGGACAGCATA +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSLPYRT*WLGDSI
Trigger: TATGCTGTCCCCTAACCACCACGTGCGATATGGAAG...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTCACTGCAACAAGGATaGAGACTCCAGCAGAGTGCA +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSSLQQG*RLQQSA
Trigger: TGCACTCTGCTGGAGTCTCCATCCTTGTTGCAGTGA...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTGCTTTCGAGTTGGCTaGGCTTCCTGCTGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFCFRVG*ASCCFH
Trigger: GTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTGCTGCTGTTCCCGAGTaGCGACTGATCCATAGTAAA +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSAAVPE*RLIHSK
Trigger: TTTACTATGGATCAGTCGGCACTCGGGAACAGCAGC...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCAACTTCAAGTCTCACTaGAACAAGGATGGAGACTCC +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSNFKSH*NKDGDS
Trigger: GGAGTCTCCATCCTTGTTGCAGTGAGACTTGAAGTT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTCTTCCATATCGCACGTaGTGGTTAGGGGACAGCATA +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSLPYRT*WLGDSI
Trigger: TATGCTGTCCCCTAACCACCACGTGCGATATGGAAG...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR CAA 90 bp CCGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTaGGCTGAGCTTCCTGCTGCTTTCACACATTCTTCTTTTTCTACC +
Preference number: 2 (lower is better)
Translates to: PISSNRTQAVHPAFE*AELPAAFTHSSFST
Trigger: GGTAGAAAAAGAAGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTGAATACCGTGTACACTaGTATACACGAAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSEYRVH*YTRSCS
Trigger: GGAGCAGCTTCGTGTATATCAGTGTACACGGTATTC...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCACTCTGGTATATATGTaGAGGAGTTACTGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSTLVYM*RSYCWL
Trigger: CAGCCAACAGTAACTCCTTCACATATATACCAGAGT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGAAGTAGCAGGAGGATaGCATGTATCAATCTTGAAC +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSEVAGG*HVSILN
Trigger: GTTCAAGATTGATACATGGCATCCTCCTGCTACTTC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTCAGCACCTCCATACTTaGGCTCTTGACAACCAAGTA +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSQHLHT*ALDNQV
Trigger: TACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTG...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCATGCTAGTCAGTCACTaGATTGTCCTACTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSMLVSH*IVLLAN
Trigger: ATTTGCTAGTAGGACAATGCAGTGACTGACTAGCAT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTAACTTCAAGTCTCACTaGAACAAGGATGGAGACTCC +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSNFKSH*NKDGDS
Trigger: GGAGTCTCCATCCTTGTTGCAGTGAGACTTGAAGTT...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTCCCTCTTAAATAGGTaGGATGCACGGTACCATCTT +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSSLLNR*DARYHL
Trigger: AAGATGGTACCGTGCATCGCACCTATTTAAGAGGGA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR CCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTCAGCACCTCCATACTTaGGCTCTTGACAACCAAGTA +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFQHLHT*ALDNQV
Trigger: TACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTG...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTAGGTCCTTTGGAAGGTaGAGCTTGTTTAAGGTATGC +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSRSFGR*SLFKVC
Trigger: GCATACCTTAAACAAGCTCCACCTTCCAAAGGACCT...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCATCTACCCAGTACTCTaGAGTCTTAAGAAAAGTCAA +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSIYPVL*SLKKSQ
Trigger: TTGACTTTTCTTAAGACTTCAGAGTACTGGGTAGAT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTGGCTTCGTATCTGTTaGAAATCTTTAGCGGTTGGG +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFWLRIC*KSLAVG
Trigger: CCCAACCGCTAAAGATTTTCAACAGATACGAAGCCA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTGTTTTGGCAAATATTaGCCAAGTTGTCTTAGTGTG +
Preference number: 2 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSCFGKY*PSCLSV
Trigger: CACACTAAGACAACTTGGGCAATATTTGCCAAAACA...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTTCACTCCATTAACTTaGCCAAGCACTGGACTTAAG +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSFTPLT*PSTGLK
Trigger: CTTAAGTCCAGTGCTTGGGCAAGTTAATGGAGTGAA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTCCAGGTGGACTTGCTaGCTGATTAGTTTCATATAC +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFSRWTC*LISFIY
Trigger: GTATATGAAACTAATCAGTCAGCAAGTCCACCTGGA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTACTCTGGTATATATGTaGAGGAGTTACTGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFTLVYM*RSYCWL
Trigger: CAGCCAACAGTAACTCCTTCACATATATACCAGAGT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGAAGTAGCAGGAGGATaGCATGTATCAATCTTGAAC +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFEVAGG*HVSILN
Trigger: GTTCAAGATTGATACATGGCATCCTCCTGCTACTTC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAGAAAACTCTCTCACTaGCTTTGGGCTAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFRKLSH*LWARER
Trigger: TCTTTCTCTAGCCCAAAGGCAGTGAGAGAGTTTTCT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp TGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTCCATCAGCGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 2 (lower is better)
Translates to: WSLFKVCLYGFRASWSISVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...GCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAAACAGGCACGACTATaGCTTCAATTTCTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFKQARL*LQFLLE
Trigger: CTCAAGGAGAAATTGAAGCCATAGTCGTGCCTGTTT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR TCA 90 bp TCTGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACGAATACCGTGTACACTaGTATACACGAAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SVYAAIRTMYNVSLVKEDEYRVH*YTRSCS
Trigger: GGAGCAGCTTCGTGTATATCAGTGTACACGGTATTC...GTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 2 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTAGACAGGCCACAAGATaGCGCAGCACCTCCATACTT +
Preference number: 2 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFRQATR*RSTSIL
Trigger: AAGTATGGAGGTGCTGCGCCATCTTGTGGCCTGTCT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTTTTCCAAAGCAGGATaGACTGTATCTATCATACAC +
Preference number: 2 (lower is better)
Translates to: AVHPAFELAELPAAFTHSFSKAG*TVSIIH
Trigger: GTGTATGATAGATACAGTCCATCCTGCTTTGGAAAA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTGCTTTCGAGTTGGCTaGGCTTCCTGCTGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYCFRVG*ASCCFH
Trigger: GTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATACCCTGCTTTCGAGTTaGCTGAGCTTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHTLLSS*LSFLLL
Trigger: AAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACACCCTGCTTTCGAGTTaGCTGAGCTTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYTLLSS*LSFLLL
Trigger: AAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGCTGCTGTTCCCGAGTaGCGACTGATCCATAGTAAA +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHAAVPE*RLIHSK
Trigger: TTTACTATGGATCAGTCGGCACTCGGGAACAGCAGC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 2 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR GCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCATCCCTCTTAAATAGGTaGGATGCACGGTACCATCTT +
Preference number: 2 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSSLLNR*DARYHL
Trigger: AAGATGGTACCGTGCATCGCACCTATTTAAGAGGGA...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR GCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCACCTTCATCTGTGTATaGTGCCATTCGTACCATGTA +
Preference number: 2 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPTFICV*CHSYHV
Trigger: TACATGGTACGAATGGCAGCATACACAGATGAAGGT...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTCACTGCAACAAGGATaGAGACTCCAGCAGAGTGCA +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYSLQQG*RLQQSA
Trigger: TGCACTCTGCTGGAGTCTCCATCCTTGTTGCAGTGA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAACTTTACAGATTCCCTTaGAGTAGTCCATTCCACCCA +
Preference number: 2 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQLYRFP*SSPFHP
Trigger: TGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACGAATACCGTGTACACTaGTATACACGAAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYEYRVH*YTRSCS
Trigger: GGAGCAGCTTCGTGTATATCAGTGTACACGGTATTC...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTGGCTTCGTATCTGTTaGAAATCTTTAGCGGTTGGG +
Preference number: 2 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFWLRIC*KSLAVG
Trigger: CCCAACCGCTAAAGATTTTCAACAGATACGAAGCCA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 2 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR GCA 90 bp TGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTCTGCGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 2 (lower is better)
Translates to: WSISIYWSNCYQIAFALCVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...GCAGAGAGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR CAA 90 bp AAAAGGAGGCAATGTCTTCCACACGAGTTGTACAGTTCTGTAGCCTaGAGTATGGGATGGATCTATTTTATACCAGAAACTTGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: KRRQCLPHELYSSVA*SMGWIYFIPETWCF
Trigger: AAAGCACCAAGTTTCTGGTATAAAATAGATCCATCCCATACTCAAGGCTACAGAACTGTACAACTCGTGTGGAAGACATTGCCTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503773.6
3UTR-3UTR TCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR TCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAACTGATAAATCCATTCTaGACATCAACAGGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQLINPF*TSTGSW
Trigger: CCAACTTCCTGTTGATGTTCAGAATGGATTTATCAG...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CCA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCTTTACAGATTCCCTTaGAGTAGTCCATTCCACCCA +
Preference number: 2 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFLYRFP*SSPFHP
Trigger: TGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGCCATGTATCAATCTTaGACTTCAAGTCTCACTGCA +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHAMYQS*TSSLTA
Trigger: TGCAGTGAGACTTGAAGTTCAAGATTGATACATGGC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTGGTGGACTTGCTGACTaGTTAGTTTCATATACTACT +
Preference number: 2 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFGGLAD*LVSYTT
Trigger: AGTAGTATATGAAACTAATCAGTCAGCAAGTCCACC...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTCCAGGTGGACTTGCTaGCTGATTAGTTTCATATAC +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYSRWTC*LISFIY
Trigger: GTATATGAAACTAATCAGTCAGCAAGTCCACCTGGA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATAGAAAACTCTCTCACTaGCTTTGGGCTAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHRKLSH*LWARER
Trigger: TCTTTCTCTAGCCCAAAGGCAGTGAGAGAGTTTTCT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTTCACTCCATTAACTTaGCCAAGCACTGGACTTAAG +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHFTPLT*PSTGLK
Trigger: CTTAAGTCCAGTGCTTGGGCAAGTTAATGGAGTGAA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGACAGAACTTTTCTATaGAGAACCCAAGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHDRTFL*RTQAAF
Trigger: AAAGGCTGCTTGGGTTCTCCATAGAAAAGTTCTGTC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCAATGTATATTCTGTGTaGGAAGAATCCACATTCACA +
Preference number: 2 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPNVYSV*EESTFT
Trigger: TGTGAATGTGGATTCTTCCCACACAGAATATACATT...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGGTGGACTTGCTGACTaGTTAGTTTCATATACTACT +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHGGLAD*LVSYTT
Trigger: AGTAGTATATGAAACTAATCAGTCAGCAAGTCCACC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 2 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR GCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTGTTTTGGCAAATATTaGCCAAGTTGTCTTAGTGTG +
Preference number: 2 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFCFGKY*PSCLSV
Trigger: CACACTAAGACAACTTGGGCAATATTTGCCAAAACA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATATGCTAGTCAGTCACTaGATTGTCCTACTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHMLVSH*IVLLAN
Trigger: ATTTGCTAGTAGGACAATGCAGTGACTGACTAGCAT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp TGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTCTGCTTTATACCAGAAACTTaGTGCTTTAGATGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: WSISIYWSNCYQIAFALCFIPET*CFRWSN
Trigger: GTTGGACCATCTAAAGCACCAAGTTTCTGGTATAAA...GCAGAGAGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503773.6
3UTR-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATATCTACCCAGTACTCTaGAGTCTTAAGAAAAGTCAA +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHIYPVL*SLKKSQ
Trigger: TTGACTTTTCTTAAGACTTCAGAGTACTGGGTAGAT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATAAAGTTAAGCAATCCTaGACAAGAAAACTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHKVKQS*TRKLSH
Trigger: GTGAGAGAGTTTTCTTGTTCAGGATTGCTTAACTTT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACAAAGTTAAGCAATCCTaGACAAGAAAACTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYKVKQS*TRKLSH
Trigger: GTGAGAGAGTTTTCTTGTTCAGGATTGCTTAACTTT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR GCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTGTTTTGGCAAATATTaGCCAAGTTGTCTTAGTGTG +
Preference number: 2 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYCFGKY*PSCLSV
Trigger: CACACTAAGACAACTTGGGCAATATTTGCCAAAACA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTTTTCCAAAGCAGGATaGACTGTATCTATCATACAC +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHFSKAG*TVSIIH
Trigger: GTGTATGATAGATACAGTCCATCCTGCTTTGGAAAA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTCCTTGAGCAAACTTTaGGGTAGTAAAAGTGAATTC +
Preference number: 2 (lower is better)
Translates to: HILLFLPQFLFACSLSLHSLSKL*GSKSEF
Trigger: GAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTCACCCTGCTTTCGAGTaGGCTGAGCTTCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFHPAFE*AELPAA
Trigger: AGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTG...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTGCCATGTATCAATCTaGAACTTCAAGTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSCHVSI*NFKSHC
Trigger: GCAGTGAGACTTGAAGTTCAAGATTGATACATGGCA...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTGTGAAGGAGTTACTGTaGGCTGGCTTGTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: AVHPAFELAELPAAFTHSVKELL*AGLWVF
Trigger: AAAAACCCACAAGCCAGCCAACAGTAACTCCTTCAC...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp GGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTGATACAGGGTGCTTTTGTCTTCCACACGAGTaGTACAGTTCTGTAGCCTTG +
Preference number: 3 (lower is better)
Translates to: GAMHGTIFLLPVCDTGCFCLPHE*YSSVAL
Trigger: CAAGGCTACAGAACTGTACAACTCGTGTGGAAGACA...AAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
3UTR CCA 72 bp GCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTaGCTGAGCTTCCTGCTGCTTTCACACATTCTTCTT +
Preference number: 3 (lower is better)
Translates to: ATGLKLFTLLSS*LSFLLLSHILL
Trigger: AAGAAGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR TCA 72 bp CAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTaGGCTTCCTGCTGCTTTCACACATTCTTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: QDSSCSPCFRVG*ASCCFHTFFFF
Trigger: GAAAAAGAAGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR GCA 72 bp AGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATaGCTTTATGGATTCAGGGCTTCCTGGTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: SRSFGRWSLFKV*LYGFRASWSIS
Trigger: GCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCACCCTGCTTTCGAGTaGGCTGAGCTTCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: HILLFLPQFLFACSLSLHHPAFE*AELPAA
Trigger: AGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR TCA 72 bp TGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTGATAACACACACCACT +
Preference number: 3 (lower is better)
Translates to: CDARYHLLVASL*YRVLYLITHTT
Trigger: AGTGGTGTGTGTTATCAGATAAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTCTTGTTGTGTAAATTaGGGTCTATCCCTACCTTTA +
Preference number: 3 (lower is better)
Translates to: AVHPAFELAELPAAFTHSSCCVN*GLSLPL
Trigger: TAAAGGTAGGGATAGACCCAAATTTACACAACAAGA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR CCA 72 bp TCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTCATCTGTGTATGCTGC +
Preference number: 3 (lower is better)
Translates to: SLSKLWGSKSEF*TILPTFICVCC
Trigger: GCAGCATACACAGATGAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp TGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTCCATCAGCTTCTTACTGTTAGGGTaGCTAGATAGCGATCATTTG +
Preference number: 3 (lower is better)
Translates to: WSLFKVCLYGFRASWSISFLLLG*LDSDHL
Trigger: CAAATGATCGCTATCTAGCAACCCTAACAGTAAGAA...GCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTACAGGGTGAGTAGCTaGAAAGTCACAGGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFYRVSS*KVTGRD
Trigger: ATCCCTGCCTGTGACTTTCAAGCTACTCACCCTGTA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
3UTR-3UTR CAA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCACGAACAGTAGGTCCTTaGGAAGGTGGAGCTTGTTTA +
Preference number: 3 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSRTVGP*EGGACL
Trigger: TAAACAAGCTCCACCTTCCAAAGGACCTACTGTTCG...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp TGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATGTATATTCTACAGGGTGAGTAGCTaGAAAGTCACAGGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: CHSYHVQCVTSQRGQCIFYRVSS*KVTGRD
Trigger: ATCCCTGCCTGTGACTTTCAAGCTACTCACCCTGTA...GAATATACATTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp CCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGTACAGTTCTGTAGCCTaGAGTATGGGATGGATCTAT +
Preference number: 3 (lower is better)
Translates to: PWSSPFHPKHVIFGECFKYSSVA*SMGWIY
Trigger: ATAGATCCATCCCATACTCAAGGCTACAGAACTGTA...CTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
3UTR CCA 72 bp TATGGATTCAGGGCTTCCTGGTCCATCAGCATATACTaGAGTAACTGTTATCAAATAGCATTTGCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: YGFRASWSISIY*SNCYQIAFALC
Trigger: GCAGAGAGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGCCCTGAATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTACCTCAGTTCCTCTTaGCTTGTAGTCTTTCACTCC +
Preference number: 3 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFYLSSS*LVVFHS
Trigger: GGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCATGATCTTACTAAGTaGTCCAAGAGCCAACCCCGA +
Preference number: 3 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYHDLTK*SKSQPR
Trigger: TCGGGGTTGGCTCTTGGACAACTTAGTAAGATCATG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCATGATCTTACTAAGTaGTCCAAGAGCCAACCCCGA +
Preference number: 3 (lower is better)
Translates to: HILLFLPQFLFACSLSLHHDLTK*SKSQPR
Trigger: TCGGGGTTGGCTCTTGGACAACTTAGTAAGATCATG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTGCCATGTATCAATCTaGAACTTCAAGTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFCHVSI*NFKSHC
Trigger: GCAGTGAGACTTGAAGTTCAAGATTGATACATGGCA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTACCTCAGTTCCTCTTaGCTTGTAGTCTTTCACTCC +
Preference number: 3 (lower is better)
Translates to: HILLFLPQFLFACSLSLHYLSSS*LVVFHS
Trigger: GGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCTGGCTTCGTATCTGTaGAAAATCTTTAGCGGTTGG +
Preference number: 3 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYLASYL*KIFSGW
Trigger: CCAACCGCTAAAGATTTTCAACAGATACGAAGCCAG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR-3UTR CAA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAACAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 3 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp GTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATGTCAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 3 (lower is better)
Translates to: VCCHSYHVQCVTSQRGQCQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...ACATTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACTTCTTACTGTTAGGGTaGCTAGATAGCGATCATTTG +
Preference number: 3 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYFLLLG*LDSDHL
Trigger: CAAATGATCGCTATCTAGCAACCCTAACAGTAAGAA...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR CCA 72 bp TTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTaGTCCATCAGCATATACTGGAGTAACTGTTATCAA +
Preference number: 3 (lower is better)
Translates to: LFKVCLYGFRAS*SISIYWSNCYQ
Trigger: TTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCACAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 3 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCATTTGGAAGGTGGAGCTaGTTTAAGGTATGCCTTTAT +
Preference number: 3 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPFGRWS*FKVCLY
Trigger: ATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAA...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
3UTR-3UTR CAA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCTCCAAGATTTTTCCATaGGCTTCAAAAGGAGGCAAT +
Preference number: 3 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFSKIFP*ASKGGN
Trigger: ATTGCCTCCTTTTGAAGCCAATGGAAAAATCTTGGA...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503773.6
3UTR-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTCTTGTTGTGTAAATTaGGGTCTATCCCTACCTTTA +
Preference number: 3 (lower is better)
Translates to: HILLFLPQFLFACSLSLHSCCVN*GLSLPL
Trigger: TAAAGGTAGGGATAGACCCAAATTTACACAACAAGA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCACCCTGCTTTCGAGTTaGCTGAGCTTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSTLLSS*LSFLLL
Trigger: AAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSVLDSE*RSGGCC
Trigger: ACAGCATCCACCCGATCTTCATTCACTGTCCAAGAC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCCTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSLVASL*YRVLYL
Trigger: CAGATAAAGCACCCTGTATCACAGACTGGCAACAAG...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCCAGCACCTCCATACTTaGGCTCTTGACAACCAAGTA +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSQHLHT*ALDNQV
Trigger: TACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTG...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGTCTATCTTCATAGGTaGTCCCACTTGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSVYLHR*SHLLLH
Trigger: GTGAAGAAGCAAGTGGGATCACCTATGAAGATAGAC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAGACAGGCCACAAGATaGCGCAGCACCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFRQATR*RSTSIL
Trigger: AAGTATGGAGGTGCTGCGCCATCTTGTGGCCTGTCT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR CAA 72 bp GGAGAACCCAAGCAGCCTTTCCATGATCTTACTAAGTaGTCCAAGAGCCAACCCCGATCAGCAGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GEPKQPFHDLTK*SKSQPRSAATG
Trigger: TCCTGTTGCTGCTGATCGGGGTTGGCTCTTGGACAACTTAGTAAGATCATGGAAAGGCTGCTTGGGTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTCCAGGTGGACTTGCTaGCTGATTAGTTTCATATAC +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSSRWTC*LISFIY
Trigger: GTATATGAAACTAATCAGTCAGCAAGTCCACCTGGA...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCACCTTCATCTGTGTATaGTGCCATTCGTACCATGTA +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSTFICV*CHSYHV
Trigger: TACATGGTACGAATGGCAGCATACACAGATGAAGGT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCACTCCATTAACTTaGCCAAGCACTGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSFTPLT*PSTGLK
Trigger: CTTAAGTCCAGTGCTTGGGCAAGTTAATGGAGTGAA...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTCTTCAGGAGGAATCTaGCTCCAAGTTGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSSSGGI*LQVEAS
Trigger: AGATGCCTCAACTTGGAGCCAGATTCCTCCTGAAGA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGGATTCAGGGCTTCCTaGTCCATCAGCATATACTGG +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFGFRAS*SISIYW
Trigger: CCAGTATATGCTGATGGACCAGGAAGCCCTGAATCC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSSKSEF*TILPTF
Trigger: GAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCAAACAGGCACGACTATaGCTTCAATTTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSKQARL*LQFLLE
Trigger: CTCAAGGAGAAATTGAAGCCATAGTCGTGCCTGTTT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
3UTR CAA 72 bp AGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTaGGCTGAGCTTCCTGCTGCTTTCACACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: SNRTQAVHPAFE*AELPAAFTHSS
Trigger: AGAAGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGAATACCGTGTACACTaGTATACACGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFEYRVH*YTRSCS
Trigger: GGAGCAGCTTCGTGTATATCAGTGTACACGGTATTC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTGGCTTCGTATCTGTTaGAAATCTTTAGCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSWLRIC*KSLAVG
Trigger: CCCAACCGCTAAAGATTTTCAACAGATACGAAGCCA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCAGCTTGTTTAAGGTATaGCTTTATGGATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSSLFKV*LYGFRA
Trigger: AGCCCTGAATCCATAAAGGCATACCTTAAACAAGCT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTGATACAGGGTGCTTTCTTTACAGATTCCCTTaGAGTAGTCCATTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GAMHGTIFLLPVCDTGCFLYRFP*SSPFHP
Trigger: TGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG...AAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGGGATTCAGGGCTTCCTaGTCCATCAGCATATACTGG +
Preference number: 4 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVGFRAS*SISIYW
Trigger: CCAGTATATGCTGATGGACCAGGAAGCCCTGAATCC...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTGCCATGTATCAATCTTaGACTTCAAGTCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSAMYQS*TSSLTA
Trigger: TGCAGTGAGACTTGAAGTTCAAGATTGATACATGGC...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTCCAGGTGGACTTGCTaGCTGATTAGTTTCATATAC +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSSRWTC*LISFIY
Trigger: GTATATGAAACTAATCAGTCAGCAAGTCCACCTGGA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTGATACAGGGTGCTTTTGTTATCTTCATAGGTaGTCCCACTTGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GAMHGTIFLLPVCDTGCFCYLHR*SHLLLH
Trigger: GTGAAGAAGCAAGTGGGATCACCTATGAAGATAACA...AAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381287.8
ENST00000522633.2
CDS-3UTR GCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTAGAAAACTCTCTCACTaGCTTTGGGCTAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSRKLSH*LWARER
Trigger: TCTTTCTCTAGCCCAAAGGCAGTGAGAGAGTTTTCT...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSSKSEF*TILPTF
Trigger: GAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACT...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp TCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGACAGGCCACAAGATaGCGCAGCACCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: SLGVVHSTQSMLSLGNALRQATR*RSTSIL
Trigger: AAGTATGGAGGTGCTGCGCCATCTTGTGGCCTGTCT...TAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTTCTGGAGGCAAGCCTaGAATTATTGTGATTCCATA +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSFWRQA*NYCDSI
Trigger: TATGGAATCACAATAATTTCAGGCTTGCCTCCAGAA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp TGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTCCATCAGCAATCTGGCTCCAAGTTaGGGCATCTTTGGTCCTATA +
Preference number: 4 (lower is better)
Translates to: WSLFKVCLYGFRASWSISNLAPS*GIFGPI
Trigger: TATAGGACCAAAGATGCCTCAACTTGGAGCCAGATT...GCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: PWSSPFHPKHVIFGECFKVLDSE*RSGGCC
Trigger: ACAGCATCCACCCGATCTTCATTCACTGTCCAAGAC...CTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTCTGATAAATCCATTCTaGACATCAACAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSLINPF*TSTGSW
Trigger: CCAACTTCCTGTTGATGTTCAGAATGGATTTATCAG...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATGCTTTCGAGTTGGCTaGGCTTCCTGCTGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGVVHSTQSMLSLGNALRCFRVG*ASCCFH
Trigger: GTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCA...TCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR GCA 90 bp GGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTGATACAGGGTGCTTTAAAATAAACAAGGCTTaGACTAGCCAAGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GAMHGTIFLLPVCDTGCFKINKA*TSQVCN
Trigger: GTTGCAGACTTGGCTAGTGCAAGCCTTGTTTATTTT...AAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp GGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTGATACAGGGTGCTTTAGCTTGTTTAAGGTATaGCTTTATGGATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GAMHGTIFLLPVCDTGCFSLFKV*LYGFRA
Trigger: AGCCCTGAATCCATAAAGGCATACCTTAAACAAGCT...AAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTTCACTCCATTAACTTaGCCAAGCACTGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFFTPLT*PSTGLK
Trigger: CTTAAGTCCAGTGCTTGGGCAAGTTAATGGAGTGAA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCAACACTCTTAATACTTaGGTTGGTCCATGTCAATTT +
Preference number: 4 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSNTLNT*VGPCQF
Trigger: AAATTGACATGGACCAACCCAAGTATTAAGAGTGTT...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGCTTTACAGATTCCCTTaGAGTAGTCCATTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVLYRFP*SSPFHP
Trigger: TGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGACAGAACTTTTCTATaGAGAACCCAAGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFDRTFL*RTQAAF
Trigger: AAAGGCTGCTTGGGTTCTCCATAGAAAAGTTCTGTC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTTCTGGAGGCAAGCCTaGAATTATTGTGATTCCATA +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFFWRQA*NYCDSI
Trigger: TATGGAATCACAATAATTTCAGGCTTGCCTCCAGAA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp TTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTAATCTGGCTCCAAGTTaGGGCATCTTTGGTCCTATA +
Preference number: 4 (lower is better)
Translates to: LEGGACLRYAFMDSGLPGNLAPS*GIFGPI
Trigger: TATAGGACCAAAGATGCCTCAACTTGGAGCCAGATT...ACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGAGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LGVVHSTQSMLSLGNALRVLDSE*RSGGCC
Trigger: ACAGCATCCACCCGATCTTCATTCACTGTCCAAGAC...TCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCGAATACCGTGTACACTaGTATACACGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPEYRVH*YTRSCS
Trigger: GGAGCAGCTTCGTGTATATCAGTGTACACGGTATTC...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGGTGGACTTGCTGACTaGTTAGTTTCATATACTACT +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFGGLAD*LVSYTT
Trigger: AGTAGTATATGAAACTAATCAGTCAGCAAGTCCACC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAAAATAAACAAGGCTTaGACTAGCCAAGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFKINKA*TSQVCN
Trigger: GTTGCAGACTTGGCTAGTGCAAGCCTTGTTTATTTT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp TTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTATAGGTGATCCCACTTaGTTCTTCACTCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LEGGACLRYAFMDSGLPGIGDPT*FFTPVT
Trigger: AGTGACTGGAGTGAAGAAGCAAGTGGGATCACCTAT...ACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAGCTTGTTTAAGGTATaGCTTTATGGATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFSLFKV*LYGFRA
Trigger: AGCCCTGAATCCATAAAGGCATACCTTAAACAAGCT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTGTTTTGGCAAATATTaGCCAAGTTGTCTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSCFGKY*PSCLSV
Trigger: CACACTAAGACAACTTGGGCAATATTTGCCAAAACA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGCTGCTGTTCCCGAGTaGCGACTGATCCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSAAVPE*RLIHSK
Trigger: TTTACTATGGATCAGTCGGCACTCGGGAACAGCAGC...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGATTCAGGGCTTCCTaGTCCATCAGCATATACTGG +
Preference number: 4 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSGFRAS*SISIYW
Trigger: CCAGTATATGCTGATGGACCAGGAAGCCCTGAATCC...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGAAACAGGCACGACTATaGCTTCAATTTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVKQARL*LQFLLE
Trigger: CTCAAGGAGAAATTGAAGCCATAGTCGTGCCTGTTT...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381287.8
ENST00000503773.6
CDS-3UTR CCA 90 bp CATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGGGCTTCCATATCGCACGTaGTGGTTAGGGGACAGCATA +
Preference number: 4 (lower is better)
Translates to: HSTQSMLSLGNALRSITGLPYRT*WLGDSI
Trigger: TATGCTGTCCCCTAACCACCACGTGCGATATGGAAG...CCCTGTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp AAGTCACAGGCAGGGATAGTTAAAACAGCTGCATCTGATTTGCCAACAAGATTTGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: KSQAGIVKTAASDLPTRFVLDSE*RSGGCC
Trigger: ACAGCATCCACCCGATCTTCATTCACTGTCCAAGAC...AAATCTTGTTGGCAAATCAGATGCAGCTGTTTTAACTATCCCTGCCTGTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCACTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSLVASL*YRVLYL
Trigger: CAGATAAAGCACCCTGTATCACAGACTGGCAACAAG...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTATCTACCCAGTACTCTaGAGTCTTAAGAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFIYPVL*SLKKSQ
Trigger: TTGACTTTTCTTAAGACTTCAGAGTACTGGGTAGAT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAAAGTTAAGCAATCCTaGACAAGAAAACTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFKVKQS*TRKLSH
Trigger: GTGAGAGAGTTTTCTTGTTCAGGATTGCTTAACTTT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGATAGGTGATCCCACTTaGTTCTTCACTCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LYRFPWSSPFHPKHVIFGIGDPT*FFTPVT
Trigger: AGTGACTGGAGTGAAGAAGCAAGTGGGATCACCTAT...CCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCTCCCTCTTAAATAGGTaGGATGCACGGTACCATCTT +
Preference number: 4 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPSLLNR*DARYHL
Trigger: AAGATGGTACCGTGCATCGCACCTATTTAAGAGGGA...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTGCTGCTGTTCCCGAGTaGCGACTGATCCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFAAVPE*RLIHSK
Trigger: TTTACTATGGATCAGTCGGCACTCGGGAACAGCAGC...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp TGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTCCATCAGCATACCAGAAACTTGGTaGTTTAGATGGTCCAACCAA +
Preference number: 4 (lower is better)
Translates to: WSLFKVCLYGFRASWSISIPETW*FRWSNQ
Trigger: TTGGTTGGACCATCTAAAGCACCAAGTTTCTGGTAT...GCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR CCA 90 bp AGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGAGGTCCTTTGGAAGGTaGAGCTTGTTTAAGGTATGC +
Preference number: 4 (lower is better)
Translates to: SRSFGRWSLFKVCLYGFRRSFGR*SLFKVC
Trigger: GCATACCTTAAACAAGCTCCACCTTCCAAAGGACCT...CCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp TCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAACATCAACAGGAAGTTaGTCCCACTCTAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: SLGVVHSTQSMLSLGNALTSTGS*SHSKTA
Trigger: AGCTGTCTTAGAGTGGGACCAACTTCCTGTTGATGT...TAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTAATGTATATTCTGTGTaGGAAGAATCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: AVHPAFELAELPAAFTHSNVYSV*EESTFT
Trigger: TGTGAATGTGGATTCTTCCCACACAGAATATACATT...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTCTTCCATATCGCACGTaGTGGTTAGGGGACAGCATA +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFLPYRT*WLGDSI
Trigger: TATGCTGTCCCCTAACCACCACGTGCGATATGGAAG...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATAGACAGGCCACAAGATaGCGCAGCACCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHRQATR*RSTSIL
Trigger: AAGTATGGAGGTGCTGCGCCATCTTGTGGCCTGTCT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAAAATCTGGCTCCAAGTTaGGGCATCTTTGGTCCTATA +
Preference number: 4 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQNLAPS*GIFGPI
Trigger: TATAGGACCAAAGATGCCTCAACTTGGAGCCAGATT...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHVLDSE*RSGGCC
Trigger: ACAGCATCCACCCGATCTTCATTCACTGTCCAAGAC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTCTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFLVASL*YRVLYL
Trigger: CAGATAAAGCACCCTGTATCACAGACTGGCAACAAG...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCACTCTGGTATATATGTaGAGGAGTTACTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPTLVYM*RSYCWL
Trigger: CAGCCAACAGTAACTCCTTCACATATATACCAGAGT...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGCACAAAATTAGTAAGTaGAGGAGTAGGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVHKISK*RSRDLK
Trigger: CTTCAAATCCCTACTCCTTCACTTACTAATTTTGTG...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp AGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGTGTTATCTTCATAGGTaGTCCCACTTGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRSFGRWSLFKVCLYGFRCYLHR*SHLLLH
Trigger: GTGAAGAAGCAAGTGGGATCACCTATGAAGATAACA...CCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381287.8
ENST00000522633.2
CDS-3UTR TCA 90 bp CATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGGGGTGTATCTTCATAGGTaGTCCCACTTGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HSTQSMLSLGNALRSITGVYLHR*SHLLLH
Trigger: GTGAAGAAGCAAGTGGGATCACCTATGAAGATACAC...CCCTGTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR GCA 90 bp TTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTAAAATAAACAAGGCTTaGACTAGCCAAGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LEGGACLRYAFMDSGLPGKINKA*TSQVCN
Trigger: GTTGCAGACTTGGCTAGTGCAAGCCTTGTTTATTTT...ACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp AACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 4 (lower is better)
Translates to: NSRSFGRWSLFKVCLYGFVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...GAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp TCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAGAAGTAGCAGGAGGATaGCATGTATCAATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SLGVVHSTQSMLSLGNALEVAGG*HVSILN
Trigger: GTTCAAGATTGATACATGGCATCCTCCTGCTACTTC...TAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR GCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCAGAAAACTCTCTCACTaGCTTTGGGCTAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPRKLSH*LWARER
Trigger: TCTTTCTCTAGCCCAAAGGCAGTGAGAGAGTTTTCT...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CCA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGGGATTCAGGGCTTCCTaGTCCATCAGCATATACTGG +
Preference number: 4 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKGFRAS*SISIYW
Trigger: CCAGTATATGCTGATGGACCAGGAAGCCCTGAATCC...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGGGAGGTCCTTTGGAAGGTaGAGCTTGTTTAAGGTATGC +
Preference number: 4 (lower is better)
Translates to: HSTQSMLSLGNALRSITGRSFGR*SLFKVC
Trigger: GCATACCTTAAACAAGCTCCACCTTCCAAAGGACCT...CCCTGTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGGGACATCAACAGGAAGTTaGTCCCACTCTAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: HSTQSMLSLGNALRSITGTSTGS*SHSKTA
Trigger: AGCTGTCTTAGAGTGGGACCAACTTCCTGTTGATGT...CCCTGTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTAATGTATATTCTGTGTaGGAAGAATCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFNVYSV*EESTFT
Trigger: TGTGAATGTGGATTCTTCCCACACAGAATATACATT...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCTTCCATATCGCACGTaGTGGTTAGGGGACAGCATA +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHLPYRT*WLGDSI
Trigger: TATGCTGTCCCCTAACCACCACGTGCGATATGGAAG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTCACTGCAACAAGGATaGAGACTCCAGCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHSLQQG*RLQQSA
Trigger: TGCACTCTGCTGGAGTCTCCATCCTTGTTGCAGTGA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp AGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGACAGAACTTTTCTATaGAGAACCCAAGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SRSFGRWSLFKVCLYGFRDRTFL*RTQAAF
Trigger: AAAGGCTGCTTGGGTTCTCCATAGAAAAGTTCTGTC...CCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTCATGCTTTTTCCATTaGGTTTCACTCAGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYSCFFH*VSLRPR
Trigger: GCGCGGCCTGAGTGAAACCCAATGGAAAAAGCATGA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381298.7
CDS-3UTR TCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTAATCTGGCTCCAAGTTaGGGCATCTTTGGTCCTATA +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFNLAPS*GIFGPI
Trigger: TATAGGACCAAAGATGCCTCAACTTGGAGCCAGATT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: PWSSPFHPKHVIFGECFKVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...CTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCACTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPLVASL*YRVLYL
Trigger: CAGATAAAGCACCCTGTATCACAGACTGGCAACAAG...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp AGTATGGGATGGATCTATTTTATACCAGAAACTTGGTGCTTTAGATGGTCCAACCTTGTTGCCAGTCTGTaGTACAGGGTGCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: SMGWIYFIPETWCFRWSNLVASL*YRVLYL
Trigger: CAGATAAAGCACCCTGTATCACAGACTGGCAACAAG...GTTGGACCATCTAAAGCACCAAGTTTCTGGTATAAAATAGATCCATCCCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR TCA 90 bp TCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTACTGATAAATCCATTCTaGACATCAACAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SLGVVHSTQSMLSLGNALLINPF*TSTGSW
Trigger: CCAACTTCCTGTTGATGTTCAGAATGGATTTATCAG...TAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGAATACCGTGTACACTaGTATACACGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHEYRVH*YTRSCS
Trigger: GGAGCAGCTTCGTGTATATCAGTGTACACGGTATTC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp TTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTATCTACCCAGTACTCTaGAGTCTTAAGAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LEGGACLRYAFMDSGLPGIYPVL*SLKKSQ
Trigger: TTGACTTTTCTTAAGACTTCAGAGTACTGGGTAGAT...ACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAAGCCATGTATCAATCTTaGACTTCAAGTCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQAMYQS*TSSLTA
Trigger: TGCAGTGAGACTTGAAGTTCAAGATTGATACATGGC...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp CTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGGTGGACTTGCTGACTaGTTAGTTTCATATACTACT +
Preference number: 4 (lower is better)
Translates to: LYRFPWSSPFHPKHVIFGGGLAD*LVSYTT
Trigger: AGTAGTATATGAAACTAATCAGTCAGCAAGTCCACC...CCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp AACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCTCCAGGTGGACTTGCTaGCTGATTAGTTTCATATAC +
Preference number: 4 (lower is better)
Translates to: NSRSFGRWSLFKVCLYGFSRWTC*LISFIY
Trigger: GTATATGAAACTAATCAGTCAGCAAGTCCACCTGGA...GAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACTGGCTTCGTATCTGTTaGAAATCTTTAGCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYWLRIC*KSLAVG
Trigger: CCCAACCGCTAAAGATTTTCAACAGATACGAAGCCA...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR GCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTATAGGTGATCCCACTTaGTTCTTCACTCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFIGDPT*FFTPVT
Trigger: AGTGACTGGAGTGAAGAAGCAAGTGGGATCACCTAT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp AAGTCACAGGCAGGGATAGTTAAAACAGCTGCATCTGATTTGCCAACAAGATTTGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 4 (lower is better)
Translates to: KSQAGIVKTAASDLPTRFVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...AAATCTTGTTGGCAAATCAGATGCAGCTGTTTTAACTATCCCTGCCTGTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp TGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTCTGCTCCCTCTTAAATAGGTaGGATGCACGGTACCATCTT +
Preference number: 4 (lower is better)
Translates to: WSISIYWSNCYQIAFALCSLLNR*DARYHL
Trigger: AAGATGGTACCGTGCATCGCACCTATTTAAGAGGGA...GCAGAGAGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCAGCTTGTTTAAGGTATaGCTTTATGGATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPSLFKV*LYGFRA
Trigger: AGCCCTGAATCCATAAAGGCATACCTTAAACAAGCT...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAAACCTTCATCTGTGTATaGTGCCATTCGTACCATGTA +
Preference number: 4 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQTFICV*CHSYHV
Trigger: TACATGGTACGAATGGCAGCATACACAGATGAAGGT...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAACCTTCATCTGTGTATaGTGCCATTCGTACCATGTA +
Preference number: 4 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSTFICV*CHSYHV
Trigger: TACATGGTACGAATGGCAGCATACACAGATGAAGGT...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp TGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTCTGCAACTTCAAGTCTCACTaGAACAAGGATGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: WSISIYWSNCYQIAFALCNFKSH*NKDGDS
Trigger: GGAGTCTCCATCCTTGTTGCAGTGAGACTTGAAGTT...GCAGAGAGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CCA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACCTTTACAGATTCCCTTaGAGTAGTCCATTCCACCCA +
Preference number: 4 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYLYRFP*SSPFHP
Trigger: TGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTAGGTCCTTTGGAAGGTaGAGCTTGTTTAAGGTATGC +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFRSFGR*SLFKVC
Trigger: GCATACCTTAAACAAGCTCCACCTTCCAAAGGACCT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTACATCAACAGGAAGTTaGTCCCACTCTAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFTSTGS*SHSKTA
Trigger: AGCTGTCTTAGAGTGGGACCAACTTCCTGTTGATGT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATGTAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: VCCHSYHVQCVTSQRGQCSKSEF*TILPTF
Trigger: GAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACT...ACATTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp AAGTCACAGGCAGGGATAGTTAAAACAGCTGCATCTGATTTGCCAACAAGATTTACCACGGTAGAATACTaGACAGTGCTCGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: KSQAGIVKTAASDLPTRFTTVEY*TVLEVF
Trigger: AAACACTTCGAGCACTGTCCAGTATTCTACCGTGGT...AAATCTTGTTGGCAAATCAGATGCAGCTGTTTTAACTATCCCTGCCTGTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381287.8
ENST00000503773.6
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTACCACGGTAGAATACTaGACAGTGCTCGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFTTVEY*TVLEVF
Trigger: AAACACTTCGAGCACTGTCCAGTATTCTACCGTGGT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCAGCACCTCCATACTTaGGCTCTTGACAACCAAGTA +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYQHLHT*ALDNQV
Trigger: TACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCATTCTGGAGGCAAGCCTaGAATTATTGTGATTCCATA +
Preference number: 4 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSFWRQA*NYCDSI
Trigger: TATGGAATCACAATAATTTCAGGCTTGCCTCCAGAA...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACAATCTGGCTCCAAGTTaGGGCATCTTTGGTCCTATA +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYNLAPS*GIFGPI
Trigger: TATAGGACCAAAGATGCCTCAACTTGGAGCCAGATT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGTCTATCTTCATAGGTaGTCCCACTTGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHVYLHR*SHLLLH
Trigger: GTGAAGAAGCAAGTGGGATCACCTATGAAGATAGAC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR TCA 90 bp CATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGGGGTGATTTCCATCTTGTaGGAGTCACTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: HSTQSMLSLGNALRSITGVISIL*ESLHNP
Trigger: TGGATTATGAAGTGACTCTCACAAGATGGAAATCAC...CCCTGTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTACTCTGGTATATATGTaGAGGAGTTACTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFTLVYM*RSYCWL
Trigger: CAGCCAACAGTAACTCCTTCACATATATACCAGAGT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCAAAGTTAAGCAATCCTaGACAAGAAAACTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPKVKQS*TRKLSH
Trigger: GTGAGAGAGTTTTCTTGTTCAGGATTGCTTAACTTT...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR GCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACATAGGTGATCCCACTTaGTTCTTCACTCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYIGDPT*FFTPVT
Trigger: AGTGACTGGAGTGAAGAAGCAAGTGGGATCACCTAT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCGTACCATCTTCTTGTTaGCAGTCTGTGATACAGGGT +
Preference number: 4 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFVPSSC*QSVIQG
Trigger: ACCCTGTATCACAGACTGGCAACAAGAAGATGGTAC...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTCCCTCTTAAATAGGTaGGATGCACGGTACCATCTT +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHSLLNR*DARYHL
Trigger: AAGATGGTACCGTGCATCGCACCTATTTAAGAGGGA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCATCCCTCTTAAATAGGTaGGATGCACGGTACCATCTT +
Preference number: 4 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPSLLNR*DARYHL
Trigger: AAGATGGTACCGTGCATCGCACCTATTTAAGAGGGA...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp AACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGCTTGTTTAAGGTATaGCTTTATGGATTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NSRSFGRWSLFKVCLYGFSLFKV*LYGFRA
Trigger: AGCCCTGAATCCATAAAGGCATACCTTAAACAAGCT...GAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACACCTTCATCTGTGTATaGTGCCATTCGTACCATGTA +
Preference number: 4 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYTFICV*CHSYHV
Trigger: TACATGGTACGAATGGCAGCATACACAGATGAAGGT...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTGAAGTAGCAGGAGGATaGCATGTATCAATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFEVAGG*HVSILN
Trigger: GTTCAAGATTGATACATGGCATCCTCCTGCTACTTC...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACTTCACTCCATTAACTTaGCCAAGCACTGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYFTPLT*PSTGLK
Trigger: CTTAAGTCCAGTGCTTGGGCAAGTTAATGGAGTGAA...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCTTTACAGATTCCCTTaGAGTAGTCCATTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYLYRFP*SSPFHP
Trigger: TGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATAGGTCCTTTGGAAGGTaGAGCTTGTTTAAGGTATGC +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHRSFGR*SLFKVC
Trigger: GCATACCTTAAACAAGCTCCACCTTCCAAAGGACCT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACAGGTCCTTTGGAAGGTaGAGCTTGTTTAAGGTATGC +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYRSFGR*SLFKVC
Trigger: GCATACCTTAAACAAGCTCCACCTTCCAAAGGACCT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYSKSEF*TILPTF
Trigger: GAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACT...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTAAACAGGCACGACTATaGCTTCAATTTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFKQARL*LQFLLE
Trigger: CTCAAGGAGAAATTGAAGCCATAGTCGTGCCTGTTT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACACCACGGTAGAATACTaGACAGTGCTCGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYTTVEY*TVLEVF
Trigger: AAACACTTCGAGCACTGTCCAGTATTCTACCGTGGT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCACCACGGTAGAATACTaGACAGTGCTCGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFTTVEY*TVLEVF
Trigger: AAACACTTCGAGCACTGTCCAGTATTCTACCGTGGT...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381287.8
ENST00000503773.6
CDS-3UTR CCA 90 bp GTGATACAGGGTGCTTTATCTGATAACACACACCACTCAAGTATATATTTCTTTTCACTGCAACAAGGATaGAGACTCCAGCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VIQGALSDNTHHSSIYFFSLQQG*RLQQSA
Trigger: TGCACTCTGCTGGAGTCTCCATCCTTGTTGCAGTGA...AAAGAAATATATACTTGAGTGGTGTGTGTTATCAGATAAAGCACCCTGTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTGACAGAACTTTTCTATaGAGAACCCAAGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFDRTFL*RTQAAF
Trigger: AAAGGCTGCTTGGGTTCTCCATAGAAAAGTTCTGTC...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GCTTCCTGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTGATAAATCCATTCTaGACATCAACAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ASWSISIYWSNCYQIAFALINPF*TSTGSW
Trigger: CCAACTTCCTGTTGATGTTCAGAATGGATTTATCAG...AGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACACTCTGGTATATATGTaGAGGAGTTACTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYTLVYM*RSYCWL
Trigger: CAGCCAACAGTAACTCCTTCACATATATACCAGAGT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACAGGGCACAAAATTAGTAAGTaGAGGAGTAGGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSTQSMLSLGNALRSITGHKISK*RSRDLK
Trigger: CTTCAAATCCCTACTCCTTCACTTACTAATTTTGTG...CCCTGTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503773.6
ENST00000522633.2
CDS-3UTR GCA 90 bp GCTTCCTGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTATGCTAGTCAGTCACTaGATTGTCCTACTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: ASWSISIYWSNCYQIAFAMLVSH*IVLLAN
Trigger: ATTTGCTAGTAGGACAATGCAGTGACTGACTAGCAT...AGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR GCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTATGCTAGTCAGTCACTaGATTGTCCTACTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFMLVSH*IVLLAN
Trigger: ATTTGCTAGTAGGACAATGCAGTGACTGACTAGCAT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACGAAGTAGCAGGAGGATaGCATGTATCAATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYEVAGG*HVSILN
Trigger: GTTCAAGATTGATACATGGCATCCTCCTGCTACTTC...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACAGAAAACTCTCTCACTaGCTTTGGGCTAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYRKLSH*LWARER
Trigger: TCTTTCTCTAGCCCAAAGGCAGTGAGAGAGTTTTCT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp TTGTACAGTTCTGTAGCCTTGAGTATGGGATGGATCTATTTTATACCAGAAACTACATCAACAGGAAGTTaGTCCCACTCTAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: LYSSVALSMGWIYFIPETTSTGS*SHSKTA
Trigger: AGCTGTCTTAGAGTGGGACCAACTTCCTGTTGATGT...AGTTTCTGGTATAAAATAGATCCATCCCATACTCAAGGCTACAGAACTGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR CCA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGAGTAAAAGTGAATTCTaGACCATCCTTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKSKSEF*TILPTF
Trigger: GAAGGTGGGAAGGATGGTCCAGAATTCACTTTTACT...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp CTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCTTGAGCAAACTTTaGGGTAGTAAAAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: LGVVHSTQSMLSLGNALRSLSKL*GSKSEF
Trigger: GAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGA...TCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACAAACAGGCACGACTATaGCTTCAATTTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYKQARL*LQFLLE
Trigger: CTCAAGGAGAAATTGAAGCCATAGTCGTGCCTGTTT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATTTATACCAGAAACTTaGTGCTTTAGATGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQFIPET*CFRWSN
Trigger: GTTGGACCATCTAAAGCACCAAGTTTCTGGTATAAA...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503773.6
3UTR CAA 72 bp GACATAACCATAGTCACAGGGAATAAAGAATCAGGTTaGAATGTCCACAGGTTTCTAAAACTAAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DITIVTGNKESG*NVHRFLKLSSG
Trigger: GCCAGAGCTTAGTTTTAGAAACCTGTGGACATTCAAACCTGATTCTTTATTCCCTGTGACTATGGTTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTTCTGGAGGCAAGCCTaGAATTATTGTGATTCCATA +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHFWRQA*NYCDSI
Trigger: TATGGAATCACAATAATTTCAGGCTTGCCTCCAGAA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp AGTATGGGATGGATCTATTTTATACCAGAAACTTGGTGCTTTAGATGGTCCAACTTCTGGAGGCAAGCCTaGAATTATTGTGATTCCATA +
Preference number: 4 (lower is better)
Translates to: SMGWIYFIPETWCFRWSNFWRQA*NYCDSI
Trigger: TATGGAATCACAATAATTTCAGGCTTGCCTCCAGAA...GTTGGACCATCTAAAGCACCAAGTTTCTGGTATAAAATAGATCCATCCCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCTGATAAATCCATTCTaGACATCAACAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYLINPF*TSTGSW
Trigger: CCAACTTCCTGTTGATGTTCAGAATGGATTTATCAG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTAAAGTTAAGCAATCCTaGACAAGAAAACTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFKVKQS*TRKLSH
Trigger: GTGAGAGAGTTTTCTTGTTCAGGATTGCTTAACTTT...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATAAAATAAACAAGGCTTaGACTAGCCAAGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHKINKA*TSQVCN
Trigger: GTTGCAGACTTGGCTAGTGCAAGCCTTGTTTATTTT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR GCA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGAAAATAAACAAGGCTTaGACTAGCCAAGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKKINKA*TSQVCN
Trigger: GTTGCAGACTTGGCTAGTGCAAGCCTTGTTTATTTT...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAAAACACTCTTAATACTTaGGTTGGTCCATGTCAATTT +
Preference number: 4 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQNTLNT*VGPCQF
Trigger: AAATTGACATGGACCAACCCAAGTATTAAGAGTGTT...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp ACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAAATGTATATTCTGTGTaGGAAGAATCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: TVGPLEGGACLRYAFMDSNVYSV*EESTFT
Trigger: TGTGAATGTGGATTCTTCCCACACAGAATATACATT...TGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTCCTTGAGCAAACTTTaGGGTAGTAAAAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFSLSKL*GSKSEF
Trigger: GAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACTCCTTGAGCAAACTTTaGGGTAGTAAAAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYSLSKL*GSKSEF
Trigger: GAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGA...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp TGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTCTGCTCCTTGAGCAAACTTTaGGGTAGTAAAAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: WSISIYWSNCYQIAFALCSLSKL*GSKSEF
Trigger: GAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGA...GCAGAGAGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GCTTCCTGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTTTTTCCAAAGCAGGATaGACTGTATCTATCATACAC +
Preference number: 4 (lower is better)
Translates to: ASWSISIYWSNCYQIAFAFSKAG*TVSIIH
Trigger: GTGTATGATAGATACAGTCCATCCTGCTTTGGAAAA...AGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR TCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGGATAGCGATCATTTGTaGGATTTACTGTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKDSDHL*DLLSVL
Trigger: CAAAACTGACAGTAAATCTCACAAATGATCGCTATC...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR TCA 90 bp TTGTACAGTTCTGTAGCCTTGAGTATGGGATGGATCTATTTTATACCAGAAACTCTGATAAATCCATTCTaGACATCAACAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LYSSVALSMGWIYFIPETLINPF*TSTGSW
Trigger: CCAACTTCCTGTTGATGTTCAGAATGGATTTATCAG...AGTTTCTGGTATAAAATAGATCCATCCCATACTCAAGGCTACAGAACTGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACATCTACCCAGTACTCTaGAGTCTTAAGAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYIYPVL*SLKKSQ
Trigger: TTGACTTTTCTTAAGACTTCAGAGTACTGGGTAGAT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR TCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCACAAAATTAGTAAGTaGAGGAGTAGGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYHKISK*RSRDLK
Trigger: CTTCAAATCCCTACTCCTTCACTTACTAATTTTGTG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381298.7
CDS-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATATACCAGAAACTTGGTaGTTTAGATGGTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHIPETW*FRWSIF
Trigger: GAAGATAGACCATCTAAAGCACCAAGTTTCTGGTAT...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR GCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACATACCAGAAACTTGGTaGTTTAGATGGTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYIPETW*FRWSIF
Trigger: GAAGATAGACCATCTAAAGCACCAAGTTTCTGGTAT...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR GCA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTGTTTTGGCAAATATTaGCCAAGTTGTCTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: HILLFLPQFLFACSLSLHCFGKY*PSCLSV
Trigger: CACACTAAGACAACTTGGGCAATATTTGCCAAAACA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CCA 90 bp AAGTCACAGGCAGGGATAGTTAAAACAGCTGCATCTGATTTGCCAACAAGATTTAACACTCTTAATACTTaGGTTGGTCCATGTCAATTT +
Preference number: 4 (lower is better)
Translates to: KSQAGIVKTAASDLPTRFNTLNT*VGPCQF
Trigger: AAATTGACATGGACCAACCCAAGTATTAAGAGTGTT...AAATCTTGTTGGCAAATCAGATGCAGCTGTTTTAACTATCCCTGCCTGTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCAAACACTCTTAATACTTaGGTTGGTCCATGTCAATTT +
Preference number: 4 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPNTLNT*VGPCQF
Trigger: AAATTGACATGGACCAACCCAAGTATTAAGAGTGTT...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CCA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTTTATACCAGAAACTTaGTGCTTTAGATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYFIPET*CFRWSI
Trigger: GATAGACCATCTAAAGCACCAAGTTTCTGGTATAAA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR CCA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCAAATGTATATTCTGTGTaGGAAGAATCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPNVYSV*EESTFT
Trigger: TGTGAATGTGGATTCTTCCCACACAGAATATACATT...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTCACCCTGCTTTCGAGTaGGCTGAGCTTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: AVHPAFELAELPAAFTHSHPAFE*AELPAA
Trigger: AGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTG...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGTCATGCTTTTTCCATaGGGTTTCACTCAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSVMLFP*GFTQAA
Trigger: CGCGGCCTGAGTGAAACCCAATGGAAAAAGCATGAC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381298.7
CDS-3UTR CAA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGAATCTGGCTCCAAGTaGAGGCATCTTTGGTCCTAT +
Preference number: 5 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSESGSK*RHLWSY
Trigger: ATAGGACCAAAGATGCCTCAACTTGGAGCCAGATTC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCCATGATCTTACTAAGTaGTCCAAGAGCCAACCCCGA +
Preference number: 5 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSHDLTK*SKSQPR
Trigger: TCGGGGTTGGCTCTTGGACAACTTAGTAAGATCATG...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCAGCGCACGAACCCCTaGGCGCCAGGCTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: HILLFLPQFLFACSLSLHQRTNP*APGWAR
Trigger: TCTGGCCCAGCCTGGCGCCAAGGGGTTCGTGCGCTG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381298.7
CDS-3UTR CAA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCGGCTTCAATTTCTCCTaGAGCAAACTTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSGFNFS*SKLWGS
Trigger: ACTACCCCAAAGTTTGCTCAAGGAGAAATTGAAGCC...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CGATCAGCAGCAACAGGACTCAAGCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTACAGTTCTGTAGCCTaGAGTATGGGATGGATCTAT +
Preference number: 5 (lower is better)
Translates to: RSAATGLKLFTLLSSWLSYSSVA*SMGWIY
Trigger: ATAGATCCATCCCATACTCAAGGCTACAGAACTGTA...GCTCAGCCAACTCGAAAGCAGGGTGAACAGCTTGAGTCCTGTTGCTGCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGAATCTGGCTCCAAGTaGAGGCATCTTTGGTCCTAT +
Preference number: 5 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFESGSK*RHLWSY
Trigger: ATAGGACCAAAGATGCCTCAACTTGGAGCCAGATTC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGTGAAGGAGTTACTGTaGGCTGGCTTGTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFVKELL*AGLWVF
Trigger: AAAAACCCACAAGCCAGCCAACAGTAACTCCTTCAC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTACCTCAGTTCCTCTTaGCTTGTAGTCTTTCACTCC +
Preference number: 5 (lower is better)
Translates to: AVHPAFELAELPAAFTHSYLSSS*LVVFHS
Trigger: GGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTCATGATCTTACTAAGTaGTCCAAGAGCCAACCCCGA +
Preference number: 5 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFHDLTK*SKSQPR
Trigger: TCGGGGTTGGCTCTTGGACAACTTAGTAAGATCATG...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS GCA 90 bp GCTTCCCAGGGGCTTATCAAGTGTATCTTCATAGGTGATCCCACTTaGTTCTTCACTCCAGTCACTCCAGTATCCCTTACCATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: ASQGLIKCIFIGDPT*FFTPVTPVSLTIFL
Trigger: AAGGAAGATGGTAAGGGATACTGGAGTGACTGGAGTGAAGAAGCAAGTGGGATCACCTATGAAGATACACTTGATAAGCCCCTGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTGGCTTCAATTTCTCCTaGAGCAAACTTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFGFNFS*SKLWGS
Trigger: ACTACCCCAAAGTTTGCTCAAGGAGAAATTGAAGCC...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTGCCATGTATCAATCTaGAACTTCAAGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: AVHPAFELAELPAAFTHSCHVSI*NFKSHC
Trigger: GCAGTGAGACTTGAAGTTCAAGATTGATACATGGCA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTCAGCAAACTTGTGTGTaGCCCATTCAGATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: AVHPAFELAELPAAFTHSQQTCV*PIQILK
Trigger: CTTTAAAATCTGAATGGGCAACACACAAGTTTGCTG...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GGTGCGATGCACGGTACCATCTTCTTGTTGCCAGTCTGTGATACAGGGTGCTTTCAGCAAACTTGTGTGTaGCCCATTCAGATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: GAMHGTIFLLPVCDTGCFQQTCV*PIQILK
Trigger: CTTTAAAATCTGAATGGGCAACACACAAGTTTGCTG...AAAGCACCCTGTATCACAGACTGGCAACAAGAAGATGGTACCGTGCATCGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTTTTGGAAGGTGGAGCTaGTTTAAGGTATGCCTTTAT +
Preference number: 5 (lower is better)
Translates to: AVHPAFELAELPAAFTHSFGRWS*FKVCLY
Trigger: ATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAA...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCACCCTGCTTTCGAGTaGGCTGAGCTTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKHPAFE*AELPAA
Trigger: AGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTG...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CAA 90 bp GCTGTTCACCCTGCTTTCGAGTTGGCTGAGCTTCCTGCTGCTTTCACACATTCTCTCTTAATACTTGGGTaGGTCCATGTCAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: AVHPAFELAELPAAFTHSLLILG*VHVNFK
Trigger: CTTAAAATTGACATGGACCAACCCAAGTATTAAGAG...AGAATGTGTGAAAGCAGCAGGAAGCTCAGCCAACTCGAAAGCAGGGTGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp TCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAGAATCTGGCTCCAAGTaGAGGCATCTTTGGTCCTAT +
Preference number: 5 (lower is better)
Translates to: SLGVVHSTQSMLSLGNALESGSK*RHLWSY
Trigger: ATAGGACCAAAGATGCCTCAACTTGGAGCCAGATTC...TAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCGAATCTGGCTCCAAGTaGAGGCATCTTTGGTCCTAT +
Preference number: 5 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPESGSK*RHLWSY
Trigger: ATAGGACCAAAGATGCCTCAACTTGGAGCCAGATTC...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTCCAAGATTTTTCCATaGGCTTCAAAAGGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFSKIFP*ASKGGN
Trigger: ATTGCCTCCTTTTGAAGCCAATGGAAAAATCTTGGA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CACAAGATGGCGCAGCACCTCCATACTTGGGCTCTTGACAACCAAGTAGGTTTTTTCTTACTGTTAGGGTaGCTAGATAGCGATCATTTG +
Preference number: 5 (lower is better)
Translates to: HKMAQHLHTWALDNQVGFFLLLG*LDSDHL
Trigger: CAAATGATCGCTATCTAGCAACCCTAACAGTAAGAA...AAAACCTACTTGGTTGTCAAGAGCCCAAGTATGGAGGTGCTGCGCCATCTTGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp AACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCTACAGGGTGAGTAGCTaGAAAGTCACAGGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: NSRSFGRWSLFKVCLYGFYRVSS*KVTGRD
Trigger: ATCCCTGCCTGTGACTTTCAAGCTACTCACCCTGTA...GAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATGTTACAGGGTGAGTAGCTaGAAAGTCACAGGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: VCCHSYHVQCVTSQRGQCYRVSS*KVTGRD
Trigger: ATCCCTGCCTGTGACTTTCAAGCTACTCACCCTGTA...ACATTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCCGAACAGTAGGTCCTTaGGAAGGTGGAGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPRTVGP*EGGACL
Trigger: TAAACAAGCTCCACCTTCCAAAGGACCTACTGTTCG...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTGGCTTCAATTTCTCCTaGAGCAAACTTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: LEGGACLRYAFMDSGLPGGFNFS*SKLWGS
Trigger: ACTACCCCAAAGTTTGCTCAAGGAGAAATTGAAGCC...ACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS TCA 90 bp CCTAAACACATATTCTGTAAAAGGTTTAAGGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGTGTCTTCAGGAGGAATCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PKHIFCKRFKVLDSE*RSGGCCVFRRNLAP
Trigger: TGGAGCCAGATTCCTCCTGAAGACACAGCATCCACCCGATCTTCATTCACTGTCCAAGACCTTAAACCTTTTACAGAATATGTGTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381293.6
ENST00000381294.7
ENST00000381298.7
ENST00000502326.7
ENST00000503773.6
ENST00000522633.2
ENST00000651614.1
CDS GCA 90 bp GAAACTTGGTGCTTTAGATGGTCTATCTTCATAGGTGATCCCACTTaGTTCTTCACTCCAGTCACTCCAGTATCCCTTACCATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: ETWCFRWSIFIGDPT*FFTPVTPVSLTIFL
Trigger: AAGGAAGATGGTAAGGGATACTGGAGTGACTGGAGTGAAGAAGCAAGTGGGATCACCTATGAAGATAGACCATCTAAAGCACCAAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336909.9
ENST00000381294.7
ENST00000381298.7
ENST00000502326.7
ENST00000506241.1
ENST00000651614.1
CDS-3UTR CAA 90 bp TGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTCCATCAGCCAGCAAACTTGTGTGTaGCCCATTCAGATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: WSLFKVCLYGFRASWSISQQTCV*PIQILK
Trigger: CTTTAAAATCTGAATGGGCAACACACAAGTTTGCTG...GCTGATGGACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CCATCCTTCCCACCTTCATCTGTGTATGCTGCCATTCGTACCATGTACAATGTGTTCTTACTGTTAGGGTaGCTAGATAGCGATCATTTG +
Preference number: 5 (lower is better)
Translates to: PSFPPSSVYAAIRTMYNVFLLLG*LDSDHL
Trigger: CAAATGATCGCTATCTAGCAACCCTAACAGTAAGAA...CACATTGTACATGGTACGAATGGCAGCATACACAGATGAAGGTGGGAAGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATGTCGAACAGTAGGTCCTTaGGAAGGTGGAGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: VCCHSYHVQCVTSQRGQCRTVGP*EGGACL
Trigger: TAAACAAGCTCCACCTTCCAAAGGACCTACTGTTCG...ACATTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TCTGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACGGCTTCAATTTCTCCTaGAGCAAACTTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: SVYAAIRTMYNVSLVKEDGFNFS*SKLWGS
Trigger: ACTACCCCAAAGTTTGCTCAAGGAGAAATTGAAGCC...GTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATGTGTGAAGGAGTTACTGTaGGCTGGCTTGTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: VCCHSYHVQCVTSQRGQCVKELL*AGLWVF
Trigger: AAAAACCCACAAGCCAGCCAACAGTAACTCCTTCAC...ACATTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS TCA 90 bp ATTTTTCCACCCAAGAGTCAGGCTCCATCTCACAGATACAAACCTTaGAAGTCACAGGCAGGGATAGTTAAAACAGCTGCATCTGATTTG +
Preference number: 5 (lower is better)
Translates to: IFPPKSQAPSHRYKP*KSQAGIVKTAASDL
Trigger: CAAATCAGATGCAGCTGTTTTAACTATCCCTGCCTGTGACTTTCAAGGTTTGTATCTGTGAGATGGAGCCTGACTCTTGGGTGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506241.1
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTGAATCTGGCTCCAAGTaGAGGCATCTTTGGTCCTAT +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFESGSK*RHLWSY
Trigger: ATAGGACCAAAGATGCCTCAACTTGGAGCCAGATTC...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTGTCTTCCACACGAGTaGTACAGTTCTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFCLPHE*YSSVAL
Trigger: CAAGGCTACAGAACTGTACAACTCGTGTGGAAGACA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR CAA 90 bp TTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCAGGGCTTCCTGGTTCCAAGATTTTTCCATaGGCTTCAAAAGGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LEGGACLRYAFMDSGLPGSKIFP*ASKGGN
Trigger: ATTGCCTCCTTTTGAAGCCAATGGAAAAATCTTGGA...ACCAGGAAGCCCTGAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TCTGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACTGCCATGTATCAATCTaGAACTTCAAGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: SVYAAIRTMYNVSLVKEDCHVSI*NFKSHC
Trigger: GCAGTGAGACTTGAAGTTCAAGATTGATACATGGCA...GTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTCATGATCTTACTAAGTaGTCCAAGAGCCAACCCCGA +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFHDLTK*SKSQPR
Trigger: TCGGGGTTGGCTCTTGGACAACTTAGTAAGATCATG...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS CCA 90 bp ATACAGCGAATCCTAAACACATATTCTGTAAAAGGTTTAAGGTCTTaGACAGTGAATGAAGATCGGGTGGATGCTGTGTCTTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: IQRILNTYSVKGLRS*TVNEDRVDAVSSGG
Trigger: TCCTCCTGAAGACACAGCATCCACCCGATCTTCATTCACTGTCCAAGACCTTAAACCTTTTACAGAATATGTGTTTAGGATTCGCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381293.6
ENST00000381294.7
ENST00000381298.7
ENST00000502326.7
ENST00000503773.6
ENST00000522633.2
ENST00000651614.1
CDS-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATTGTCTTCCACACGAGTaGTACAGTTCTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HILLFLPQFLFACSLSLHCLPHE*YSSVAL
Trigger: CAAGGCTACAGAACTGTACAACTCGTGTGGAAGACA...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR CAA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCATGTCTTCCACACGAGTaGTACAGTTCTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPCLPHE*YSSVAL
Trigger: CAAGGCTACAGAACTGTACAACTCGTGTGGAAGACA...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR CAA 90 bp CTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGTCCAAGATTTTTCCATaGGCTTCAAAAGGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LYRFPWSSPFHPKHVIFGSKIFP*ASKGGN
Trigger: ATTGCCTCCTTTTGAAGCCAATGGAAAAATCTTGGA...CCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGCAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 5 (lower is better)
Translates to: LYRFPWSSPFHPKHVIFGQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...CCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TCTGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACTTTGGAAGGTGGAGCTaGTTTAAGGTATGCCTTTAT +
Preference number: 5 (lower is better)
Translates to: SVYAAIRTMYNVSLVKEDFGRWS*FKVCLY
Trigger: ATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAA...GTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCGAACAGTAGGTCCTTaGGAAGGTGGAGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: HILLFLPQFLFACSLSLHRTVGP*EGGACL
Trigger: TAAACAAGCTCCACCTTCCAAAGGACCTACTGTTCG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACCGAACAGTAGGTCCTTaGGAAGGTGGAGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYRTVGP*EGGACL
Trigger: TAAACAAGCTCCACCTTCCAAAGGACCTACTGTTCG...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCGAACAGTAGGTCCTTaGGAAGGTGGAGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKRTVGP*EGGACL
Trigger: TAAACAAGCTCCACCTTCCAAAGGACCTACTGTTCG...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATGTGAAGGAGTTACTGTaGGCTGGCTTGTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: HILLFLPQFLFACSLSLHVKELL*AGLWVF
Trigger: AAAAACCCACAAGCCAGCCAACAGTAACTCCTTCAC...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTCTGGCTTCGTATCTGTaGAAAATCTTTAGCGGTTGG +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFLASYL*KIFSGW
Trigger: CCAACCGCTAAAGATTTTCAACAGATACGAAGCCAG...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCTTCCTGGTCCATCAGCATATACTGGAGTAACTGTTATCAAATAGCATTTGCTCTGGCTTCGTATCTGTaGAAAATCTTTAGCGGTTGG +
Preference number: 5 (lower is better)
Translates to: ASWSISIYWSNCYQIAFALASYL*KIFSGW
Trigger: CCAACCGCTAAAGATTTTCAACAGATACGAAGCCAG...AGCAAATGCTATTTGATAACAGTTACTCCAGTATATGCTGATGGACCAGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381287.8
CDS-3UTR CAA 90 bp TTCTCCTTGAGCAAACTTTGGGGTAGTAAAAGTGAATTCTGGACCATCCTTCCCCTCTTAATACTTGGGTaGGTCCATGTCAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: FSLSKLWGSKSEFWTILPLLILG*VHVNFK
Trigger: CTTAAAATTGACATGGACCAACCCAAGTATTAAGAG...GGGAAGGATGGTCCAGAATTCACTTTTACTACCCCAAAGTTTGCTCAAGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTACAGTTCTGTAGCCTaGAGTATGGGATGGATCTAT +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFYSSVA*SMGWIY
Trigger: ATAGATCCATCCCATACTCAAGGCTACAGAACTGTA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336909.9
ENST00000381298.7
CDS-3UTR CAA 90 bp AACAGTAGGTCCTTTGGAAGGTGGAGCTTGTTTAAGGTATGCCTTTATGGATTCTCCAAGATTTTTCCATaGGCTTCAAAAGGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: NSRSFGRWSLFKVCLYGFSKIFP*ASKGGN
Trigger: ATTGCCTCCTTTTGAAGCCAATGGAAAAATCTTGGA...GAATCCATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAAGGACCTACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATTCTTACTGTTAGGGTaGCTAGATAGCGATCATTTG +
Preference number: 5 (lower is better)
Translates to: LGVVHSTQSMLSLGNALRFLLLG*LDSDHL
Trigger: CAAATGATCGCTATCTAGCAACCCTAACAGTAAGAA...TCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGACAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 5 (lower is better)
Translates to: LGVVHSTQSMLSLGNALRQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...TCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CTTGGAGTAGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATTTGGAAGGTGGAGCTaGTTTAAGGTATGCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LGVVHSTQSMLSLGNALRFGRWS*FKVCLY
Trigger: ATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAA...TCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACTACTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp TGTGTATGCTGCCATTCGTACCATGTACAATGTGTCACTAGTCAAAGAGGACAATTTGGAAGGTGGAGCTaGTTTAAGGTATGCCTTTAT +
Preference number: 5 (lower is better)
Translates to: CVCCHSYHVQCVTSQRGQFGRWS*FKVCLY
Trigger: ATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAA...TTGTCCTCTTTGACTAGTGACACATTGTACATGGTACGAATGGCAGCATACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCGGCTTCAATTTCTCCTaGAGCAAACTTTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFGFNFS*SKLWGS
Trigger: ACTACCCCAAAGTTTGCTCAAGGAGAAATTGAAGCC...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTACCTCAGTTCCTCTTaGCTTGTAGTCTTTCACTCC +
Preference number: 5 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYYLSSS*LVVFHS
Trigger: GGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTCCAAGATTTTTCCATaGGCTTCAAAAGGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFSKIFP*ASKGGN
Trigger: ATTGCCTCCTTTTGAAGCCAATGGAAAAATCTTGGA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTTCTTACTGTTAGGGTaGCTAGATAGCGATCATTTG +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFFLLLG*LDSDHL
Trigger: CAAATGATCGCTATCTAGCAACCCTAACAGTAAGAA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTCAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTTTGGAAGGTGGAGCTaGTTTAAGGTATGCCTTTAT +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFFGRWS*FKVCLY
Trigger: ATAAAGGCATACCTTAAACAAGCTCCACCTTCCAAA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCAGCAAACTTGTGTGTaGCCCATTCAGATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: HILLFLPQFLFACSLSLHQQTCV*PIQILK
Trigger: CTTTAAAATCTGAATGGGCAACACACAAGTTTGCTG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp GACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCACAGCAAACTTGTGTGTaGCCCATTCAGATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: DNVYSVWEESTFTAVSFPQQTCV*PIQILK
Trigger: CTTTAAAATCTGAATGGGCAACACACAAGTTTGCTG...TGGAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp AGTCCATTCCACCCAAAGCATGTTATCTTTGGGGAATGCTTTAAGATCCATTACCTCTTAATACTTGGGTaGGTCCATGTCAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: SPFHPKHVIFGECFKIHYLLILG*VHVNFK
Trigger: CTTAAAATTGACATGGACCAACCCAAGTATTAAGAG...GTAATGGATCTTAAAGCATTCCCCAAAGATAACATGCTTTGGGTGGAATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp CACATTCTTCTTTTTCTACCTCAGTTCCTCTTTGCTTGTAGTCTTTCACTCCATCAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 5 (lower is better)
Translates to: HILLFLPQFLFACSLSLHQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...ATGGAGTGAAAGACTACAAGCAAAGAGGAACTGAGGTAGAAAAAGAAGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp CTCAAGTATATATTTCTTTACAGATTCCCTTGGAGTAGTCCATTCCACCCAAAGCAAAGCATGTTATCTTaGGGGAATGCTTTAAGATCC +
Preference number: 5 (lower is better)
Translates to: LKYIFLYRFPWSSPFHPKQSMLS*GNALRS
Trigger: GGATCTTAAAGCATTCCCCAAAGATAACATGCTTTG...CTTTGGGTGGAATGGACTACTCCAAGGGAATCTGTAAAGAAATATATACTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GCCCAAGCACTGGACTTAAGTATGGAAGAGCCTATACGCAGTTGTAATATATTTTCTTGTTGTGTAAATTaGGGTCTATCCCTACCTTTA +
Preference number: 5 (lower is better)
Translates to: AQALDLSMEEPIRSCNIFSCCVN*GLSLPL
Trigger: TAAAGGTAGGGATAGACCCAAATTTACACAACAAGA...AAATATATTACAACTGCGTATAGGCTCTTCCATACTTAAGTCCAGTGCTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS-3UTR CAA 90 bp AGGACAATGTATATTCTGTGTGGGAAGAATCCACATTCACAGCAGTTTCATTTCCTCTTAATACTTGGGTaGGTCCATGTCAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: RTMYILCGKNPHSQQFHFLLILG*VHVNFK
Trigger: CTTAAAATTGACATGGACCAACCCAAGTATTAAGAG...GAAATGAAACTGCTGTGAATGTGGATTCTTCCCACACAGAATATACATTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381287.8
ENST00000503773.6
ENST00000522633.2
CDS-3UTR CAA 90 bp GTGATACAGGGTGCTTTATCTGATAACACACACCACTCAAGTATATATTTCTTTTACAGTTCTGTAGCCTaGAGTATGGGATGGATCTAT +
Preference number: 5 (lower is better)
Translates to: VIQGALSDNTHHSSIYFFYSSVA*SMGWIY
Trigger: ATAGATCCATCCCATACTCAAGGCTACAGAACTGTA...AAAGAAATATATACTTGAGTGGTGTGTGTTATCAGATAAAGCACCCTGTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503773.6
CDS-3UTR CAA 90 bp GGATTACCACCATATAGCTCACCATGTTATCCCAGAAAGACTACAATTTCATACTCTTGTTGTGTAAATTaGGGTCTATCCCTACCTTTA +
Preference number: 5 (lower is better)
Translates to: GLPPYSSPCYPRKTTISYSCCVN*GLSLPL
Trigger: TAAAGGTAGGGATAGACCCAAATTTACACAACAAGA...GTATGAAATTGTAGTCTTTCTGGGATAACATGGTGAGCTATATGGTGGTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381298.7
CDS TCA 72 bp CCCAAGAGTCAGGCTCCATCTCACAGATACAAACCTTaGAAGTCACAGGCAGGGATAGTTAAAACAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PKSQAPSHRYKP*KSQAGIVKTAA
Trigger: TGCAGCTGTTTTAACTATCCCTGCCTGTGACTTTCAAGGTTTGTATCTGTGAGATGGAGCCTGACTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506241.1
CDS TCA 72 bp AGCTGTAAGGTCCTCGTTGGCAAGACTCAAGCCATGTaGAGAAGCCATAATGGATCCATGAGACAAACTTTG +
Preference number: 6 (lower is better)
Translates to: SCKVLVGKTQAM*RSHNGSMRQTL
Trigger: CAAAGTTTGTCTCATGGATCCATTATGGCTTCTTCACATGGCTTGAGTCTTGCCAACGAGGACCTTACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423954.3
ENST00000651614.1
CDS TCA 72 bp ATATTCTGTAAAAGGTTTAAGGTCTTGGACAGTGAATaGAGATCGGGTGGATGCTGTGTCTTCAGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: IFCKRFKVLDSE*RSGGCCVFRRN
Trigger: ATTCCTCCTGAAGACACAGCATCCACCCGATCTTCATTCACTGTCCAAGACCTTAAACCTTTTACAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336909.9
ENST00000381287.8
ENST00000381293.6
ENST00000381294.7
ENST00000381298.7
ENST00000502326.7
ENST00000503773.6
ENST00000522633.2
ENST00000651614.1
CDS CCA 72 bp TTGAGTATGGGATGGATCTATTTTATACCAGAAACTTaGTGCTTTAGATGGTCTATCTTCATAGGTGATCCC +
Preference number: 6 (lower is better)
Translates to: LSMGWIYFIPET*CFRWSIFIGDP
Trigger: GGGATCACCTATGAAGATAGACCATCTAAAGCACCAAGTTTCTGGTATAAAATAGATCCATCCCATACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336909.9
ENST00000381294.7
ENST00000381298.7
ENST00000502326.7
ENST00000506241.1
ENST00000651614.1
CDS CCA 72 bp TTGAGTATGGGATGGATCTATTTTATACCAGAAACTTaGTGCTTTAGATGGTCCAACCAAAATTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: LSMGWIYFIPET*CFRWSNQNSRI
Trigger: GATCCTGGAATTTTGGTTGGACCATCTAAAGCACCAAGTTTCTGGTATAAAATAGATCCATCCCATACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503773.6