RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL6R (Homo sapiens)

Ensembl gene IDs: ENSG00000160712

Ensembl transcript IDs: ENST00000344086.8, ENST00000368485.8, ENST00000476006.5, ENST00000502679.1, ENST00000507256.1, ENST00000512471.1, ENST00000515190.1, ENST00000622330.4

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGCCTGGCACGGACCCTGAACTGGCCCGCCTGCCCCTCCGTGTaGAGCCCCTGCCCACGGCTGCACGGGACAGCTGGGTGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: EGLARTLNWPACPSV*SPCPRLHGTAGCRA
Trigger: AGCCCTGCACCCAGCTGTCCCGTGCAGCCGTGGGCAGGGGCTGCACACGGAGGGGCAGGCGGGCCAGTTCAGGGTCCGTGCCAGGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR TCA 90 bp GCTGGTGCCCAGCCGCACGGAGGACAGGAGGCCTTCACAGGGCACTaGGGAGGGCCTGGCACGGACCCTGAACTGGCCCGCCTGCCCCTC +
Preference number: 1 (lower is better)
Translates to: AGAQPHGGQEAFTGH*GGPGTDPELARLPL
Trigger: GAGGGGCAGGCGGGCCAGTTCAGGGTCCGTGCCAGGCCCTCCTCAGTGCCCTGTGAAGGCCTCCTGTCCTCCGTGCGGCTGGGCACCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 90 bp GCACGGACCCTGAACTGGCCCGCCTGCCCCTCCGTGTGCAGCCCCTaGCCACGGCTGCACGGGACAGCTGGGTGCAGGGCTCTTGCCTCA +
Preference number: 1 (lower is better)
Translates to: ARTLNWPACPSVCSP*PRLHGTAGCRALAS
Trigger: TGAGGCAAGAGCCCTGCACCCAGCTGTCCCGTGCAGCCGTGGGCAGGGGCTGCACACGGAGGGGCAGGCGGGCCAGTTCAGGGTCCGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 90 bp AGGCCTTCACAGGGCACTGAGGAGGGCCTGGCACGGACCCTGAACTaGCCCGCCTGCCCCTCCGTGTGCAGCCCCTGCCCACGGCTGCAC +
Preference number: 1 (lower is better)
Translates to: RPSQGTEEGLARTLN*PACPSVCSPCPRLH
Trigger: GTGCAGCCGTGGGCAGGGGCTGCACACGGAGGGGCAGGCGGGCCAGTTCAGGGTCCGTGCCAGGCCCTCCTCAGTGCCCTGTGAAGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 90 bp GCCTGCCCCACTGGGCCCTGTTCACTACCAGGTGGGCTTCCAGCCTaGTTCCAGCAACAGATTCCACAACCTGCCGCGGCAACCAGTTTC +
Preference number: 1 (lower is better)
Translates to: ACPTGPCSLPGGLPA*FQQQIPQPAAATSF
Trigger: GAAACTGGTTGCCGCGGCAGGTTGTGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACCTGGTAGTGAACAGGGCCCAGTGGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 90 bp CACAACATGCCCAGCCTGCCCCACTGGGCCCTGTTCACTACCAGGTaGGCTTCCAGCCTGGTTCCAGCAACAGATTCCACAACCTGCCGC +
Preference number: 1 (lower is better)
Translates to: HNMPSLPHWALFTTR*ASSLVPATDSTTCR
Trigger: GCGGCAGGTTGTGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACCTGGTAGTGAACAGGGCCCAGTGGGGCAGGCTGGGCATGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 90 bp ACCAGGTGGGCTTCCAGCCTGGTTCCAGCAACAGATTCCACAACCTaGCGCGGCAACCAGTTTCCTTTCTCCCAAGACAGCAGGGAAGTG +
Preference number: 1 (lower is better)
Translates to: TRWASSLVPATDSTT*RGNQFPFSQDSREV
Trigger: CACTTCCCTGCTGTCTTGGGAGAAAGGAAACTGGTTGCCGCGGCAGGTTGTGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 90 bp ACGGGACAGCTGGGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTaGCCCTGCATCTCCAAATTAAGACCACCAACTCCACCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: TGQLGAGLLPQRVTG*PCISKLRPPTPPGA
Trigger: AGCTCCAGGTGGAGTTGGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACCCAGCTGTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 90 bp CACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTaGACGTGCTGTGAGATAATAGAGCTCAGCACCAAAGCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: HLELVSASSPPGLAF*TCCEIIELSTKAAG
Trigger: CCCAGCTGCTTTGGTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 90 bp CCTGCCGCGGCAACCAGTTTCCTTTCTCCCAAGACAGCAGGGAAGTaGCAGAGGCTCCGTGTGAACTCAGAGCCTGATAAAGAAAGCGTA +
Preference number: 1 (lower is better)
Translates to: PAAATSFLSPKTAGK*QRLRVNSEPDKESV
Trigger: TACGCTTTCTTTATCAGGCTCTGAGTTCACACGGAGCCTCTGGCACTTCCCTGCTGTCTTGGGAGAAAGGAAACTGGTTGCCGCGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 90 bp GAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGTaGTGTGAGATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACA +
Preference number: 1 (lower is better)
Translates to: ELVSASSPPGLAFWT*CEIIELSTKAAGKT
Trigger: TGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR TCA 90 bp GGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGTGCTGTaGGATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCT +
Preference number: 1 (lower is better)
Translates to: GVSILPTWVSLLDVL*DNRAQHQSSWEDIP
Trigger: AGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 90 bp TGGTTCTCTTCACAGTGGCCCAAGTTCACTCTAGCCCCTTTAAGCTaGGCATTTGGAAAGGGAGGTTTGAAACCTCAACCAGCTGAACAG +
Preference number: 1 (lower is better)
Translates to: WFSSQWPKFTLAPLS*AFGKGGLKPQPAEQ
Trigger: CTGTTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CCA 90 bp GCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATaGTTCTCTTCACAGTGGCCCAAGTTCACTCTAGCCCCTTTAAGC +
Preference number: 1 (lower is better)
Translates to: AQLLSVRVSVQRVLI*FSSQWPKFTLAPLS
Trigger: GCTTAAAGGGGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR GCA 90 bp TCAAGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTaGATTGAGACACATGTTCAGTCACCACAGATTAGAGAACATAGA +
Preference number: 1 (lower is better)
Translates to: SRQWGCCRNTGRNAP*IETHVQSPQIREHR
Trigger: TCTATGTTCTCTAATCTGTGGTGACTGAACATGTGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 90 bp GTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTaGCCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAG +
Preference number: 1 (lower is better)
Translates to: VRVSVQRVLIWFSSQ*PKFTLAPLSWAFGK
Trigger: CTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR TCA 90 bp AAAGTTATGGTGCTTCCCCCACACCTAAGTAAGTTACTTCTATGCTaGCACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAG +
Preference number: 1 (lower is better)
Translates to: KVMVLPPHLSKLLLC*HSEYWIFHPLKRKQ
Trigger: CTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGAAGTAACTTACTTAGGTGTGGGGGAAGCACCATAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CCA 90 bp AATCATATCCCCACTCTGGAATACCCTGATAACTTGAGAGCTAACTaGGTAACCACTAACACCACTGAATTTTCAAAGCTCGGACAGAAA +
Preference number: 1 (lower is better)
Translates to: NHIPTLEYPDNLRAN*VTTNTTEFSKLGQK
Trigger: TTTCTGTCCGAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATCAGGGTATTCCAGAGTGGGGATATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACCGCAAGGCTCTTCCGTaGAGCCAAAGGCCGCACACC +
Preference number: 2 (lower is better)
Translates to: PAGQSWEASFSALGQGPDRKALP*SQRPHT
Trigger: GGTGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCG...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACAAGCTGGCATGGCAGTaGGAAGCATCTTTTGCTGAG +
Preference number: 2 (lower is better)
Translates to: PAGQSWEASFSALGQGPDKLAWQ*EASFAE
Trigger: CTCAGCAAAAGATGCTTCTCACTGCCATGCCAGCTT...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGGTCCAGGCTGCTGGTaGCACCCAGCCAGCTATCTG +
Preference number: 2 (lower is better)
Translates to: SPGVEPSARLFREAKGRTGPGCW*HPASYL
Trigger: CAGATAGCTGGCTGGGTGGCACCAGCAGCCTGGACC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCCACAGGGTCCAGGCTaGTGGTGCCACCCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKPQGPG*WCHPAS
Trigger: GCTGGCTGGGTGGCACCAGCAGCCTGGACCCTGTGG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR CAA 90 bp CACGGGACAGCTGGGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTaGCCCCTGCATCTCCAAATTAAGACCACCAACTCCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: HGTAGCRALASKGHR*PLHLQIKTTNSTWS
Trigger: GCTCCAGGTGGAGTTGGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACCCAGCTGTCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGAAGGCCGCACACCCCTaGGATAAGCTGGCATGGCAG +
Preference number: 2 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKKAAHP*DKLAWQ
Trigger: CTGCCATGCCAGCTTATCTCAGGGGTGTGCGGCCTT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACACTTCCTTCTCGGCACTaGGACAGGGACCGGACACCC +
Preference number: 2 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETLPSRH*DRDRTP
Trigger: GGGTGTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAG...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGGTGGGCTTCCAGCCTaGTTCCAGCAACAGATTCCA +
Preference number: 2 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDGGLPA*FQQQIP
Trigger: TGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACC...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGTCAGACCCCAGGCTaGTGGGGGACACCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPCQTPG*WGTPVG
Trigger: CCCCACCGGTGTCCCCCAGCAGCCTGGGGTCTGACA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR TCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACTCACATTGCCCAGGCTaGTCTCAAACTTCTGGACTC +
Preference number: 2 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDSHCPG*SQTSGL
Trigger: GAGTCCAGAAGTTTGAGATCAGCCTGGGCAATGTGA...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCGAATTTCTAGGACCCTaGCGGGCAGTCGTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTEFLGP*RAVVGG
Trigger: GCCTCCCACGACTGCCCGGCAGGGTCCTAGAAATTC...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCCTCTCCGGGACCAGCTaGCCCAAAGAGTACGGCGGA +
Preference number: 2 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPLSGTS*PKEYGG
Trigger: TCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAG...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAATGGTAGAGACCCTGTaGCCCTCTCCTCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLMVETL*PSPLLP
Trigger: AGGAAGGAGAGGAGAGGGGCACAGGGTCTCTACCAT...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CAA 90 bp CCGCACACCCCTGAGATAAGCTGGCATGGCAGTGAGAAGCATCTTTaGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PHTPEISWHGSEKHL*LSPFVFYHPQGPGC
Trigger: GCAGCCTGGACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCCATGCCAGCTTATCTCAGGGGTGTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGAAGCTGGCATGGCAGTaGGAAGCATCTTTTGCTGAG +
Preference number: 2 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKKLAWQ*EASFAE
Trigger: CTCAGCAAAAGATGCTTCTCACTGCCATGCCAGCTT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCCTCTCCATAACCACCTaGGGGAGTAGTCACACGCTG +
Preference number: 2 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTLSITT*GSSHTL
Trigger: CAGCGTGTGACTACTCCCCCAGGTGGTTATGGAGAG...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACAGAAGCATCTTTTGCTaGGCCCGTTTGTGTTTTATC +
Preference number: 2 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDRSIFC*ARLCFI
Trigger: GATAAAACACAAACGGGCTCAGCAAAAGATGCTTCT...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTTCTCACCTGAGGTCCTaGAACCCAAAGCCAATGCAG +
Preference number: 2 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMASHLRS*NPKPMQ
Trigger: CTGCATTGGCTTTGGGTTGCAGGACCTCAGGTGAGA...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTAGGCTGATTTTCCCCTaGCGTAGAACCTTCCGCAAG +
Preference number: 2 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMARLIFP*RRTFRK
Trigger: CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCT...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTATGGTTCTCTTCACAGTaGCCCAAGTTCACTCTAGCC +
Preference number: 2 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLWFSSQ*PKFTLA
Trigger: GGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCA...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGAGAAGAGAGAACATTaGTTTTCAGAGGCTGTGATC +
Preference number: 2 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDEKREH*FSEAVI
Trigger: GATCACAGCCTCTGAAAACCAATGTTCTCTCTTCTC...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp GATAAAGAAAGCGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTGAGTTAGGGGACTCAAGGCAGTaGGGGTGCTGCAGAAACACA +
Preference number: 2 (lower is better)
Translates to: DKESVRASPHQGQELSELGDSRQ*GCCRNT
Trigger: TGTGTTTCTGCAGCACCCCCACTGCCTTGAGTCCCC...TAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACGCTTTCTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCAAATGCCCCGTGCATTaGGACACATGTTCAGTCACC +
Preference number: 2 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTKCPVH*DTCSVT
Trigger: GGTGACTGAACATGTGTCTCAATGCACGGGGCATTT...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACAGCCATCCTGCCTTTTTaGCAACCTAAGATGAGTTGC +
Preference number: 2 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETAILPF*QPKMSC
Trigger: GCAACTCATCTTAGGTTGGCAAAAAGGCAGGATGGC...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAGGAGTAGTCACACGCTaGTTTTTCCCTAGAGTAGAG +
Preference number: 2 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLGVVTR*FFPRVE
Trigger: CTCTACTCTAGGGAAAAACCAGCGTGTGACTACTCC...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CAA 90 bp CAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTaGATATGGTTCTCTTCACAGTGGCCCAAGTTCACTCTAGCCCCT +
Preference number: 2 (lower is better)
Translates to: QPAQLLSVRVSVQRV*IWFSSQWPKFTLAP
Trigger: AGGGGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCGCAAGGCTCTTCCGTaGAGCCAAAGGCCGCACACC +
Preference number: 2 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVRKALP*SQRPHT
Trigger: GGTGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTACCATGGTTACACGGCTaGTTTAAATCATATCCCCAC +
Preference number: 2 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLPWLHG*FKSYPH
Trigger: GTGGGGATATGATTTAAATCAGCCGTGTAACCATGG...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGCGTTTCACGTCTGGCTaGGTGGCAGATGGCTACAGG +
Preference number: 2 (lower is better)
Translates to: IIELSTKAAGKTFLNILQRFTSG*VADGYR
Trigger: CCTGTAGCCATCTGCCACGCAGCCAGACGTGAAACG...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTATTAGCCTTCTGGACGTaGTGTGAGATAATAGAGCTC +
Preference number: 2 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLLAFWT*CEIIEL
Trigger: GAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAA...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGCATCTGGTCGGTTGTaGCTCGAGGTATTGTCAGAC +
Preference number: 2 (lower is better)
Translates to: PTCPAFECPCECPKSLDMASGRL*LEVLSD
Trigger: GTCTGACAATACCTCGAGCCACAACCGACCAGATGC...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR CCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGAACCAGCTGAACAGCTaGAGCAGGCTGATTTTCCCC +
Preference number: 2 (lower is better)
Translates to: PTCPAFECPCECPKSLDMNQLNS*SRLIFP
Trigger: GGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTGGTT...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCCCTGGGTTAGCCTTCTaGACGTGCTGTGAGATAATA +
Preference number: 2 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTPGLAF*TCCEII
Trigger: TATTATCTCACAGCACGTCCAGAAGGCTAACCCAGG...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CAA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTaGAAACCTCAACCAGCTGAACAGCTGGAGCAGGCTGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: KFTLAPLSWAFGKGG*KPQPAEQLEQADFP
Trigger: GGGAAAATCAGCCTGCTCCAGCTGTTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTACAGCTGGAGCAGGCTaGTTTTCCCCTGGCGTAGAA +
Preference number: 2 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPTAGAG*FSPGVE
Trigger: TTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGT...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGACAGCTGGAGCAGGCTaGTTTTCCCCTGGCGTAGAA +
Preference number: 2 (lower is better)
Translates to: IIELSTKAAGKTFLNILQTAGAG*FSPGVE
Trigger: TTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGT...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACAGTGTCCAAAGAGTCTTaGTATGGTTCTCTTCACAGT +
Preference number: 2 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETVSKES*YGSLHS
Trigger: ACTGTGAAGAGAACCATATCAAGACTCTTTGGACAC...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTAAAACGACCAGGCCCTaGGATACTGTATTATTCACC +
Preference number: 2 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMAKTTRP*DTVLFT
Trigger: GGTGAATAATACAGTATCTCAGGGCCTGGTCGTTTT...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGAGTAGTCTGTATTGCTaGTGTCATAAGGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: PTCPAFECPCECPKSLDMSSLYC*CHKGSV
Trigger: CACGGAGCCCTTATGACATCAGCAATACAGACTACT...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTTGGAAAGGGAGGTTTaGAACCTCAACCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: PTCPAFECPCECPKSLDMLEREV*NLNQLN
Trigger: GTTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCCTCTGCTTCTCACCTaGGGTCCTGCAACCCAAAGC +
Preference number: 2 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVPLLLT*GPATQS
Trigger: GCTTTGGGTTGCAGGACCTCAGGTGAGAAGCAGAGG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAAAGAGTACGGCGGATaGATGCTTGTCTTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGKEYGG*MLVLPS
Trigger: GGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGATGAAACGATGCAGTaGGCCAGGAGCATGGCGGCT +
Preference number: 2 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVDETMQ*ARSMAA
Trigger: AGCCGCCATGCTCCTGGCCCACTGCATCGTTTCATC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGAGGCTGATTTTCCCCTaGCGTAGAACCTTCCGCAAG +
Preference number: 2 (lower is better)
Translates to: FECPCECPKSLDMVLFTVRLIFP*RRTFRK
Trigger: CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCT...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR TCA 90 bp GATAAAGAAAGCGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTGAGTTAAACGGTATAAAGAATTaGAGAACTGTGGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: DKESVRASPHQGQELSELNGIKN*RTVGTE
Trigger: TTCTGTGCCCACAGTTCTTCAATTCTTTATACCGTT...TAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACGCTTTCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGACCCAGCCAGCTATCTaGGGAAGAAGTAGTCTGTAT +
Preference number: 2 (lower is better)
Translates to: FECPCECPKSLDMVLFTVTQPAI*GRSSLY
Trigger: ATACAGACTACTTCTTCCCCAGATAGCTGGCTGGGT...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR TCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACAAGTTACTTCTATGCTaGCACAGCGAATATTGGATA +
Preference number: 2 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNKLLLC*HSEYWI
Trigger: TATCCAATATTCGCTGTGTCAGCATAGAAGTAACTT...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGCAAAGCCAATGCAGTTaGCTCTGTATTCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: IIELSTKAAGKTFLNILQQSQCS*LCIQQM
Trigger: CATTTGCTGAATACAGAGGCAACTGCATTGGCTTTG...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR GCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACGACAACAAACAAAGCTaGAGTAAAACCGTTTTGATC +
Preference number: 2 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNDNKQS*SKTVLI
Trigger: GATCAAAACGGTTTTACTGCAGCTTTGTTTGTTGTC...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CAA 90 bp ACGGCTGATTTAAATCATATCCCCACTCTGGAATACCCTGATAACTaGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: TADLNHIPTLEYPDN*RANWVTTNTTEFSK
Trigger: CTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATCAGGGTATTCCAGAGTGGGGATATGATTTAAATCAGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 72 bp CCCAGCCTGCCCCACTGGGCCCTGTTCACTACCAGGTaGGCTTCCAGCCTGGTTCCAGCAACAGATTCCACA +
Preference number: 3 (lower is better)
Translates to: PSLPHWALFTTR*ASSLVPATDST
Trigger: TGTGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACCTGGTAGTGAACAGGGCCCAGTGGGGCAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 72 bp ACTGGGCCCTGTTCACTACCAGGTGGGCTTCCAGCCTaGTTCCAGCAACAGATTCCACAACCTGCCGCGGCA +
Preference number: 3 (lower is better)
Translates to: TGPCSLPGGLPA*FQQQIPQPAAA
Trigger: TGCCGCGGCAGGTTGTGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACCTGGTAGTGAACAGGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 72 bp GCTTCCAGCCTGGTTCCAGCAACAGATTCCACAACCTaGCGCGGCAACCAGTTTCCTTTCTCCCAAGACAGC +
Preference number: 3 (lower is better)
Translates to: ASSLVPATDSTT*RGNQFPFSQDS
Trigger: GCTGTCTTGGGAGAAAGGAAACTGGTTGCCGCGGCAGGTTGTGGAATCTGTTGCTGGAACCAGGCTGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR TCA 72 bp CGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTaGGTTACCAAAGGCCTCGTCAACATAGCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: RKGKSPSGPRAL*VTKGLVNIASA
Trigger: AGCACTGGCTATGTTGACGAGGCCTTTGGTAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 72 bp GCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTaGATCTCCAAATTAAGACCACCAACTCCACCTGGA +
Preference number: 3 (lower is better)
Translates to: AGLLPQRVTGCP*ISKLRPPTPPG
Trigger: TCCAGGTGGAGTTGGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 72 bp CTGGGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTaGCCCTGCATCTCCAAATTAAGACCACCAACTCCA +
Preference number: 3 (lower is better)
Translates to: LGAGLLPQRVTG*PCISKLRPPTP
Trigger: TGGAGTTGGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCCAACCTGCCCAGCTTTaGAGTGTCCGTGTGAGTGTC +
Preference number: 3 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTQPAQL*SVRVSV
Trigger: GACACTCACACGGACACTCAAAAGCTGGGCAGGTTG...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR TCA 72 bp ATCCTCCCCACCTGGGTTAGCCTTCTGGACGTGCTGTaGGATAATAGAGCTCAGCACCAAAGCAGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: ILPTWVSLLDVL*DNRAQHQSSWE
Trigger: TTCCCAGCTGCTTTGGTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAACCCAGGTGGGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 72 bp TCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGTaGTGTGAGATAATAGAGCTCAGCACCAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SASSPPGLAFWT*CEIIELSTKAA
Trigger: AGCTGCTTTGGTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 72 bp CTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTaGACGTGCTGTGAGATAATAGAGCTCAGCACCAAA +
Preference number: 3 (lower is better)
Translates to: LVSASSPPGLAF*TCCEIIELSTK
Trigger: TTTGGTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGCTTGTGCAGAGGTGTaGAGGGGTGGGCTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVACAEV*RGGLPA
Trigger: GGCTGGCAGCCCACCCCTCAACACCTCTGCACAAGC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CAA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTTGTGGCTCGAGGTATaGTCAGACCCCAGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPLWLEV*SDPRLL
Trigger: CAGCAGCCTGGGGTCTGACAATACCTCGAGCCACAA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR-3UTR CAA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTCTGGCATCTGGTCGGTaGTGGCTCGAGGTATTGTCA +
Preference number: 3 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGLASGR*WLEVLS
Trigger: TGACAATACCTCGAGCCACAACCGACCAGATGCCAG...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
3UTR CCA 72 bp GCTGTTCTCAAGTCTCAGAAACTTTATGTGGTGGGATaGGAGGGAACCACCATAACCGCCTGCCTGCCTTTT +
Preference number: 3 (lower is better)
Translates to: AVLKSQKLYVVG*EGTTITACLPF
Trigger: AAAAGGCAGGCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTTGAGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACACCCTTTAACAGCATTTaGCTGTTCTCAAGTCTCAGA +
Preference number: 3 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETPFNSI*LFSSLR
Trigger: TCTGAGACTTGAGAACAGCAAAATGCTGTTAAAGGG...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 72 bp GCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTaGCCGGCTTTGGTAACACCACATGTGGGTAAAACG +
Preference number: 3 (lower is better)
Translates to: AIWISHLPLAWF*PALVTPHVGKT
Trigger: CGTTTTACCCACATGTGGTGTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR GCA 72 bp TGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTaGATTGAGACACATGTTCAGTCACCACAGATTAGA +
Preference number: 3 (lower is better)
Translates to: WGCCRNTGRNAP*IETHVQSPQIR
Trigger: TCTAATCTGTGGTGACTGAACATGTGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CCA 72 bp AGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTaGCCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: SVQRVLIWFSSQ*PKFTLAPLSWA
Trigger: TGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CCA 72 bp TTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATaGTTCTCTTCACAGTGGCCCAAGTTCACTCTAGCC +
Preference number: 3 (lower is better)
Translates to: LSVRVSVQRVLI*FSSQWPKFTLA
Trigger: GGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGCTGCTAGCTCTCCTTaGTGGGAGGTGGAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVAASSP*WEVEKR
Trigger: TCTCTTCTCCACCTCCCACAAAGGAGAGCTAGCAGC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CAA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTAATTTGCTAAGGCACTaGGGTTTTAAGAGTTTGAGT +
Preference number: 3 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMANLLRH*GFKSLS
Trigger: ACTCAAACTCTTAAAACCCAAGTGCCTTAGCAAATT...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTAGTGAGAAGCATCTTTaGCTGAGCCCGTTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPSEKHL*LSPFVF
Trigger: AAACACAAACGGGCTCAGCAAAAGATGCTTCTCACT...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR-3UTR CAA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGGAATACCCTGATAACTaGAGAGCTAACTGGGTAACC +
Preference number: 3 (lower is better)
Translates to: IIELSTKAAGKTFLNILQEYPDN*RANWVT
Trigger: GGTTACCCAGTTAGCTCTCAAGTTATCAGGGTATTC...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR TCA 72 bp GTGCTTCCCCCACACCTAAGTAAGTTACTTCTATGCTaGCACAGCGAATATTGGATATTCCACCCTCTCAAG +
Preference number: 3 (lower is better)
Translates to: VLPPHLSKLLLC*HSEYWIFHPLK
Trigger: CTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGAAGTAACTTACTTAGGTGTGGGGGAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CCA 72 bp CCCACTCTGGAATACCCTGATAACTTGAGAGCTAACTaGGTAACCACTAACACCACTGAATTTTCAAAGCTC +
Preference number: 3 (lower is better)
Translates to: PTLEYPDNLRAN*VTTNTTEFSKL
Trigger: GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATCAGGGTATTCCAGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCAGTGAGAAGCATCTTTaGCTGAGCCCGTTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLSEKHL*LSPFVF
Trigger: AAACACAAACGGGCTCAGCAAAAGATGCTTCTCACT...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCCTGACACAGCGAATATaGGATATTCCACCCTCTCAA +
Preference number: 3 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLLTQRI*DIPPSQ
Trigger: TTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAG...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR TCA 72 bp GCAATAGGGTCTAAAATCTACAGACAAGCCCAGCAATaGAAATCACGGCTTACTGAAGACAGTAACAGCTTA +
Preference number: 3 (lower is better)
Translates to: AIGSKIYRQAQQ*KSRLTEDSNSL
Trigger: TAAGCTGTTACTGTCTTCAGTAAGCCGTGATTTTCATTGCTGGGCTTGTCTGTAGATTTTAGACCCTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR-3UTR CAA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCAGTGTCCAAAGAGTCTaGATATGGTTCTCTTCACAG +
Preference number: 3 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLSVQRV*IWFSSQ
Trigger: CTGTGAAGAGAACCATATCAAGACTCTTTGGACACT...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACGCCTGGCACGGACCCTaGACTGGCCCGCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDAWHGP*TGPPAP
Trigger: AGGGGCAGGCGGGCCAGTTCAGGGTCCGTGCCAGGC...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACGCCTGCCCCTCCGTGTaGAGCCCCTGCCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDACPSV*SPCPRL
Trigger: CAGCCGTGGGCAGGGGCTGCACACGGAGGGGCAGGC...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACGCTCTCTACACACACTaGGAGTCCCTCGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDALYTH*ESLGPA
Trigger: CGCGGGGCCGAGGGACTCGCAGTGTGTGTAGAGAGC...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGTGTCAGACCCCAGGCTaGTGGGGGACACCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMCQTPG*WGTPVG
Trigger: CCCCACCGGTGTCCCCCAGCAGCCTGGGGTCTGACA...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGTCCAAGGCGTGCCCATaGCCTCCGGGCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMSKACP*PPGSTR
Trigger: GCGAGTGGAGCCCGGAGGCCATGGGCACGCCTTGGA...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGCTTCCCACTCGCACATaGCTCAGAGCGGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMLPTRT*LRAADG
Trigger: ACCGTCCGCCGCTCTGAGTCATGTGCGAGTGGGAAG...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATTCGCTCCACTCGCCTTaGCCGAACTCCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADSLHSP*PNSSWA
Trigger: TGCCCAGGAGGAGTTCGGGCAAGGCGAGTGGAGCGA...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp GGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGCATGCTTGAAAGCCGGAGCGGATaGCGCAACAGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: GRGLSGTSCPKEYGGCMLESRSG*RNSPAH
Trigger: GTGCGCGGGGCTGTTGCGCCATCCGCTCCGGCTTTC...AAGCATGCATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATTCGGCTACCACTCCATaGTCCCGCAGAGGCGGACAG +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADSATTP*SRRGGQ
Trigger: CTGTCCGCCTCTGCGGGACCATGGAGTGGTAGCCGA...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACTGTCTCCTGGCAGACTaGTCAGCACGCCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDCLLAD*SARLSP
Trigger: TGGCGAGAGGCGTGCTGACCAGTCTGCCAGGAGACA...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATCAGGGTCCAGGCTGCTaGTGCCACCCAGCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADQGPGC*CHPASY
Trigger: ATAGCTGGCTGGGTGGCACCAGCAGCCTGGACCCTG...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATAGAGGTGTTGAGGGGTaGGCTGCCAGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADRGVEG*AASRFS
Trigger: GGAGAAGCGGCTGGCAGCCCACCCCTCAACACCTCT...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATAGTGGGCCAGGAGCATaGCGGCTGGAGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADSGPGA*RLEEAL
Trigger: CAAAGCCTCCTCCAGCCGCCATGCTCCTGGCCCACT...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGAAGGCCGCACACCCCTaGGATAAGCTGGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMKAAHP*DKLAWQ
Trigger: CTGCCATGCCAGCTTATCTCAGGGGTGTGCGGCCTT...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATTGTCTCCTGGCAGACTaGTCAGCACGCCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADCLLAD*SARLSP
Trigger: TGGCGAGAGGCGTGCTGACCAGTCTGCCAGGAGACA...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATAGTCACGCTGTCTCCTaGCAGACTGGTCAGCACGCC +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADSHAVS*QTGQHA
Trigger: GGCGTGCTGACCAGTCTGCCAGGAGACAGCGTGACT...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATCCTCTGCTTCTCACCTaGGGTCCTGCAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADPLLLT*GPATQS
Trigger: GCTTTGGGTTGCAGGACCTCAGGTGAGAAGCAGAGG...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATCCGGCTCAGTGTCAGTaGGACTTCCCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADPAQCQ*DFPLAH
Trigger: ATGTGCGAGTGGGAAGTCGCACTGACACTGAGCCGG...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR GCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGCTCTCTACACACACTaGGAGTCCCTCGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTALYTH*ESLGPA
Trigger: CGCGGGGCCGAGGGACTCGCAGTGTGTGTAGAGAGC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCCTCTCGCCACCTCCTaGGCAGGGCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKPLATS*AGQRLG
Trigger: CCCAAGGCGCTGCCCTGCGCAGGAGGTGGCGAGAGG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGGTGCACAGTCCCAGCTaGGCGGCCGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKVHSPS*AAGPVA
Trigger: TGCTACCGGGCCGGCCGCCCAGCTGGGACTGTGCAC...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAACCTCCCGAAGTGCGTaGGCCACCATGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTTSRSA*ATMPGR
Trigger: CCTGCCAGGCATGGTGGCCCACGCACTTCGGGAGGT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGCTGCACGGGACAGCTaGGTGCAGGGCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDAARDS*VQGSCL
Trigger: GAGGCAAGAGCCCTGCACCCAGCTGTCCCGTGCAGC...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACCTGCAGCCGGCTTCCTaGGCACCCAGTGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDLQPAS*APSEQW
Trigger: CCACTGTTCACTGGGTGCTCAGGAAGCCGGCTGCAG...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACACGCAAGGCTCTTCCGTaGAGCCAAAGGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTRKALP*SQRPHT
Trigger: GGTGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCG...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACTGTGGGCAGTGGTACTaGAGAAGAATCTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDCGQWY*RRILHW
Trigger: CCAGTGCAAGATTCTTCTTCAGTACCACTGCCCACA...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACATCGTCAGGGATGGGGTaGTCCGAGGACCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTSSGMG*SEDPTH
Trigger: GTGAGTGGGGTCCTCGGAGCACCCCATCCCTGACGA...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACAAAGAGTACGGCGGATaGATGCTTGTCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDKEYGG*MLVLPS
Trigger: GGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTT...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACATGCCCGAACTCCTCCTaGGCACGAAGCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTCPNSS*ARSCTT
Trigger: CGTGGTGCAGCTTCGTGCCCAGGAGGAGTTCGGGCA...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACTGGTTCTCTTCACAGTaGCCCAAGTTCACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDWFSSQ*PKFTLA
Trigger: GGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCA...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAAGAGGTGTTGAGGGGTaGGCTGCCAGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTRGVEG*AASRFS
Trigger: GGAGAAGCGGCTGGCAGCCCACCCCTCAACACCTCT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACACTTCCTTCTCGGCACTaGGACAGGGACCGGACACCC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTLPSRH*DRDRTP
Trigger: GGGTGTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAG...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGTTCAGCCCGATATCTaGGCTCAAACCGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADVQPDI*AQTVVC
Trigger: ACAGACTACGGTTTGAGCTCAGATATCGGGCTGAAC...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCTTGTGCAGAGGTGTTaGGGGGTGGGCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKLVQRC*GVGCQP
Trigger: CGGCTGGCAGCCCACCCCTCAACACCTCTGCACAAG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATAGTACGGCGGATGCATaGTTGTCTTGCCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADSTADA*LSCLPS
Trigger: TGAAGGAAGGCAAGACAAGCATGCATCCGCCGTACT...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR GCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGGTGCGTGGGCCACCATaGCTGGCAGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMVRGPP*LAGKYF
Trigger: AAAATATTTTCCTGCCAGGCATGGTGGCCCACGCAC...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR GCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACACAACATGCCCAGCCTaGCCCACTGGGCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDTTCPA*PTGPCS
Trigger: TGAACAGGGCCCAGTGGGGCAGGCTGGGCATGTTGT...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGACTCCCTGGTGCTGGTaGCCAGCCGCACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKTPWCW*PAARRT
Trigger: TGTCCTCCGTGCGGCTGGGCACCAGCACCAGGGAGT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACACTTTGTCGTCAGGGATaGGGTGCTCCGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTLCRQG*GAPRTP
Trigger: TGGGGTCCTCGGAGCACCCCATCCCTGACGACAAAG...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGTGCCTGCATGGGGGTaGACACCTCGTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTVPAWG*TPRSQL
Trigger: CAGCTGAGAACGAGGTGTCCACCCCCATGCAGGCAC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATACCCCTGAGATAAGCTaGCATGGCAGTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LGWVEASPGPAAPKSTADTPEIS*HGSEKH
Trigger: ATGCTTCTCACTGCCATGCCAGCTTATCTCAGGGGT...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGGTTTTCAGAGGCTGTaGTCCCCCACTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTGFQRL*SPTQLP
Trigger: TGGGAGCTGAGTGGGGGATCACAGCCTCTGAAAACC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCGCTGGGGTGGGAGCCTaGAGCCGGCTTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTAGVGA*SRLPEH
Trigger: GTGCTCAGGAAGCCGGCTGCAGGCTCCCACCCCAGC...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCCAGAGTCGTGGAGCTaGACCGACCTCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKPESWS*TDLSSS
Trigger: GCTGCTGCTGAGGTCGGTGCAGCTCCACGACTCTGG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCTCCAAGGCGTGCCCATaGCCTCCGGGCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTSKACP*PPGSTR
Trigger: GCGAGTGGAGCCCGGAGGCCATGGGCACGCCTTGGA...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp CCTGCCGGGCAGTCGTGGGAGGCTTCCTTCTCGGCACTGGGACAGGGACCGGACCAAAGAGTCTTGATATaGTTCTCTTCACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PAGQSWEASFSALGQGPDQRVLI*FSSQWP
Trigger: GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTG...GTCCGGTCCCTGTCCCAGTGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACGGGGACTCAAGGCAGTaGGGGTGCTGCAGAAACACA +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDGDSRQ*GCCRNT
Trigger: TGTGTTTCTGCAGCACCCCCACTGCCTTGAGTCCCC...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCGCACGGACCCTGAACTaGCCCGCCTGCCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACARTLN*PACPSV
Trigger: CACGGAGGGGCAGGCGGGCCAGTTCAGGGTCCGTGC...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAACAGCTGGAGCAGGCTaGTTTTCCCCTGGCGTAGAA +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTTAGAG*FSPGVE
Trigger: TTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGCCGACGGCCAGCATaGTTCCTCCTCGGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLSRRPA*FLLGYH
Trigger: GTGGTAGCCGAGGAGGAAGCATGCTGGCCGTCGGCT...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACAATTCTGTCCAAGGCGTaGCCATGGCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETILSKA*PWPPGS
Trigger: GGAGCCCGGAGGCCATGGGCACGCCTTGGACAGAAT...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCCCACAGGGTCCAGGCTaGTGGTGCCACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACPQGPG*WCHPAS
Trigger: GCTGGCTGGGTGGCACCAGCAGCCTGGACCCTGTGG...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACATGGTAGAGACCCTGTaGCCCTCTCCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDMVETL*PSPLLP
Trigger: AGGAAGGAGAGGAGAGGGGCACAGGGTCTCTACCAT...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGATAGAAACTCCCTGGTaGTGGTGCCCAGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKIETPW*WCPAAR
Trigger: CCGTGCGGCTGGGCACCAGCACCAGGGAGTTTCTAT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCGCGCTGGAGCGTCTCTaGGCCGTCCCAGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVAALERL*AVPGCG
Trigger: ACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGC...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAAGCGGCGGACGGTCCTaGCAACGCAGGAAAACATTT +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTSGGRS*QRRKTF
Trigger: AAATGTTTTCCTGCGTTGCCAGGACCGTCCGCCGCT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGCAAAGAGTCTTGATATaGTTCTCTTCACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMQRVLI*FSSQWP
Trigger: GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTG...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTCTTCCCACTCGCACATaGCTCAGAGCGGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMALPTRT*LRAADG
Trigger: ACCGTCCGCCGCTCTGAGTCATGTGCGAGTGGGAAG...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGGTGTCCAAAGAGTCTTaGTATGGTTCTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMVSKES*YGSLHS
Trigger: ACTGTGAAGAGAACCATATCAAGACTCTTTGGACAC...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGGGTTTTCAGAGGCTGTaGTCCCCCACTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKGFQRL*SPTQLP
Trigger: TGGGAGCTGAGTGGGGGATCACAGCCTCTGAAAACC...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCGCCTTCACAGGGCACTaGGGAGGGCCTGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVAAFTGH*GGPGTD
Trigger: GTCCGTGCCAGGCCCTCCTCAGTGCCCTGTGAAGGC...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCCCACAGGGTCCAGGCTaGTGGTGCCACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPPQGPG*WCHPAS
Trigger: GCTGGCTGGGTGGCACCAGCAGCCTGGACCCTGTGG...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAGCAATCTCGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLAISAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCGAGATTGC...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCGCCCATCTGCTGGGGTaGGAGCCTGCAGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPAHLLG*EPAAGF
Trigger: GAAGCCGGCTGCAGGCTCCCACCCCAGCAGATGGGC...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGCATCTGGTCGGTTGTaGCTCGAGGTATTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTASGRL*LEVLSD
Trigger: GTCTGACAATACCTCGAGCCACAACCGACCAGATGC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCGGCTCCGTGGGTCCCTaGCATCTGGTCGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACGSVGP*HLVGCG
Trigger: GCCACAACCGACCAGATGCCAGGGACCCACGGAGCC...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAAGGCTGATTTTCCCCTaGCGTAGAACCTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTRLIFP*RRTFRK
Trigger: CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGACGCAGGAAAACATTTaGGGAACTCGCGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKTQENI*GTRAGA
Trigger: CGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAAAGCTGGCATGGCAGTaGGAAGCATCTTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTKLAWQ*EASFAE
Trigger: CTCAGCAAAAGATGCTTCTCACTGCCATGCCAGCTT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACACTTCTGGACGTGCTGTaGGATAATAGAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTLLDVL*DNRAQH
Trigger: GTGCTGAGCTCTATTATCTCACAGCACGTCCAGAAG...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTACCGGCTCAGTGTCAGTaGGACTTCCCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLPAQCQ*DFPLAH
Trigger: ATGTGCGAGTGGGAAGTCGCACTGACACTGAGCCGG...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTGCTGGGGTGGGAGCCTaGAGCCGGCTTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGAGVGA*SRLPEH
Trigger: GTGCTCAGGAAGCCGGCTGCAGGCTCCCACCCCAGC...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTTGTCAGACCCCAGGCTaGTGGGGGACACCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGCQTPG*WGTPVG
Trigger: CCCCACCGGTGTCCCCCAGCAGCCTGGGGTCTGACA...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGTGCGTGGGCCACCATaGCTGGCAGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTVRGPP*LAGKYF
Trigger: AAAATATTTTCCTGCCAGGCATGGTGGCCCACGCAC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACTCAGAACAATGGCAATaGAGAGGAGCGTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDSEQWQ*RGAFRR
Trigger: CCTTCGGAACGCTCCTCTGCATTGCCATTGTTCTGA...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTTCCGTGTGCAGCCCCTaGCCACGGCTGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGSVCSP*PRLHGT
Trigger: TGTCCCGTGCAGCCGTGGGCAGGGGCTGCACACGGA...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGTCCGGGACTGCTAACTaGCAGGAGAACTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKSGTAN*QENFWD
Trigger: GTCCCAGAAGTTCTCCTGCCAGTTAGCAGTCCCGGA...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACACTAGCCCCTTTAAGCTaGGCATTTGGAAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTLAPLS*AFGKGG
Trigger: ACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAG...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGACCTCCCGAAGTGCGTaGGCCACCATGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMTSRSA*ATMPGR
Trigger: CCTGCCAGGCATGGTGGCCCACGCACTTCGGGAGGT...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTATCGGCCGGACTGTTCTaGAACTTCCTCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLSAGLF*NFLTKS
Trigger: GCTCTTGGTGAGGAAGTTTCAGAACAGTCCGGCCGA...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGCGCAAGGCTCTTCCGTaGAGCCAAAGGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMRKALP*SQRPHT
Trigger: GGTGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCG...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACTTGTGCAGAGGTGTTaGGGGGTGGGCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKLVQRC*GVGCQP
Trigger: CGGCTGGCAGCCCACCCCTCAACACCTCTGCACAAG...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGCCTCTCGCCACCTCCTaGGCAGGGCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVPLATS*AGQRLG
Trigger: CCCAAGGCGCTGCCCTGCGCAGGAGGTGGCGAGAGG...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCCAGAGTCGTGGAGCTaGACCGACCTCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVAPESWS*TDLSSS
Trigger: GCTGCTGCTGAGGTCGGTGCAGCTCCACGACTCTGG...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTCGTCAGGGATGGGGTaGTCCGAGGACCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPSSGMG*SEDPTH
Trigger: GTGAGTGGGGTCCTCGGAGCACCCCATCCCTGACGA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAATCCTGGGCACGAAGCTaGACCACGTGCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKSWARS*TTCLRP
Trigger: CGGCCTGAGGCACGTGGTGCAGCTTCGTGCCCAGGA...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTCTCCGGGACCAGCTaGCCCAAAGAGTACGGCGGA +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVALSGTS*PKEYGG
Trigger: TCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAG...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGTGCACAGTCCCAGCTaGGCGGCCGGCCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVVHSPS*AAGPVA
Trigger: TGCTACCGGGCCGGCCGCCCAGCTGGGACTGTGCAC...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACATCCGGGACTGCTAACTaGCAGGAGAACTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETSGTAN*QENFWD
Trigger: GTCCCAGAAGTTCTCCTGCCAGTTAGCAGTCCCGGA...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGCCCGAACTCCTCCTaGGCACGAAGCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPCPNSS*ARSCTT
Trigger: CGTGGTGCAGCTTCGTGCCCAGGAGGAGTTCGGGCA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGGCATCTGGTCGGTTGTaGCTCGAGGTATTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKASGRL*LEVLSD
Trigger: GTCTGACAATACCTCGAGCCACAACCGACCAGATGC...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTGGCTCCGTGGGTCCCTaGCATCTGGTCGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGGSVGP*HLVGCG
Trigger: GCCACAACCGACCAGATGCCAGGGACCCACGGAGCC...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAACCCAGCCAGCTATCTaGGGAAGAAGTAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTTQPAI*GRSSLY
Trigger: ATACAGACTACTTCTTCCCCAGATAGCTGGCTGGGT...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGAACCAGCTGAACAGCTaGAGCAGGCTGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKNQLNS*SRLIFP
Trigger: GGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTGGTT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTGCCGGGCAGTCGTaGGAGGCTTCCTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKPAGQS*EASFSA
Trigger: TGCCGAGAAGGAAGCCTCCCACGACTGCCCGGCAGG...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACCCTGGGTTAGCCTTCTaGACGTGCTGTGAGATAATA +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDPGLAF*TCCEII
Trigger: TATTATCTCACAGCACGTCCAGAAGGCTAACCCAGG...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTGGGCCGTCCCAGGGTaGGGTTACGAAAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPWAVPG*GYESRS
Trigger: GCTCCGGCTTTCGTAACCGCACCCTGGGACGGCCCA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAGCCGACGGCCAGCATaGTTCCTCCTCGGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGSRRPA*FLLGYH
Trigger: GTGGTAGCCGAGGAGGAAGCATGCTGGCCGTCGGCT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGCGAAGCTGCACCACGTaGCTCAGGCCGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVRSCTT*LRPLQA
Trigger: CGCCTGGAGCGGCCTGAGGCACGTGGTGCAGCTTCG...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGTCCTGGGCACGAAGCTaGACCACGTGCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: IIELSTKAAGKTFLNILQSWARS*TTCLRP
Trigger: CGGCCTGAGGCACGTGGTGCAGCTTCGTGCCCAGGA...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACTCTCCGGGACCAGCTaGCCCAAAGAGTACGGCGGA +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKLSGTS*PKEYGG
Trigger: TCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAG...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAGGTCCAGGCTGCTGGTaGCACCCAGCCAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKGPGCW*HPASYL
Trigger: CAGATAGCTGGCTGGGTGGCACCAGCAGCCTGGACC...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTGGTCCAGGCTGCTGGTaGCACCCAGCCAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGGPGCW*HPASYL
Trigger: CAGATAGCTGGCTGGGTGGCACCAGCAGCCTGGACC...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTATCTCACCTGAGGTCCTaGAACCCAAAGCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLSHLRS*NPKPMQ
Trigger: CTGCATTGGCTTTGGGTTGCAGGACCTCAGGTGAGA...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCGAATTTCTAGGACCCTaGCGGGCAGTCGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVAEFLGP*RAVVGG
Trigger: GCCTCCCACGACTGCCCGGCAGGGTCCTAGAAATTC...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACAACAGATTCCACAACCTaGCGCGGCAACCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETTDSTT*RGNQFP
Trigger: AGGAAACTGGTTGCCGCGGCAGGTTGTGGAATCTGT...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAATTGAGGAACTCGCGCTaGAGCGTCTCTGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKLRNSR*SVSGPS
Trigger: GGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAA...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCCTTTGTCGTCAGGGATaGGGTGCTCCGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPLCRQG*GAPRTP
Trigger: TGGGGTCCTCGGAGCACCCCATCCCTGACGACAAAG...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTACTGGCACGGCTCCTaGAAGTCTTCGGCCGGACTG +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMYWHGS*KSSAGL
Trigger: CAGTCCGGCCGAAGACTTCCAGGAGCCGTGCCAGTA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAGTGGGCCAGGAGCATaGCGGCTGGAGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGSGPGA*RLEEAL
Trigger: CAAAGCCTCCTCCAGCCGCCATGCTCCTGGCCCACT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCAGCAACCAGGAATGTaGGCAGTGGTACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKQQPGM*AVVLKK
Trigger: CTTCTTCAGTACCACTGCCCACATTCCTGGTTGCTG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTACATCTTCCGCTAGCATaGTTCTGCCCGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLHLPLA*FCPALV
Trigger: TACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATG...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCTCAGCGTTTCACGTCTaGCTGCGTGGCAGATGGCTA +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTSAFHV*LRGRWL
Trigger: TAGCCATCTGCCACGCAGCCAGACGTGAAACGCTGA...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCGGTGGGCTTCCAGCCTaGTTCCAGCAACAGATTCCA +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTGGLPA*FQQQIP
Trigger: TGGAATCTGTTGCTGGAACCAGGCTGGAAGCCCACC...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCTTCCTGAGCACCCAGTaGACAGTGGCATTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTFLSTQ*TVALSS
Trigger: GGAAGACAATGCCACTGTTCACTGGGTGCTCAGGAA...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGAGTAGTCTGTATTGCTaGTGTCATAAGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKSSLYC*CHKGSV
Trigger: CACGGAGCCCTTATGACATCAGCAATACAGACTACT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAAGGCCGCACACCCCTaGGATAAGCTGGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGKAAHP*DKLAWQ
Trigger: CTGCCATGCCAGCTTATCTCAGGGGTGTGCGGCCTT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGTTGGAAAGGGAGGTTTaGAACCTCAACCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKLEREV*NLNQLN
Trigger: GTTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAA...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCCCTCTGCTTCTCACCTaGGGTCCTGCAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPPLLLT*GPATQS
Trigger: GCTTTGGGTTGCAGGACCTCAGGTGAGAAGCAGAGG...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTATACCTGTGTACGCTaGGCCAGGCCTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMYTCVR*ARPTAQ
Trigger: CTGGGCTGTAGGCCTGGCTCAGCGTACACAGGTATA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCGAAGCTGCACCACGTaGCTCAGGCCGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVRSCTT*LRPLQA
Trigger: CGCCTGGAGCGGCCTGAGGCACGTGGTGCAGCTTCG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGTCGCTCCACTCGCCTTaGCCGAACTCCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IIELSTKAAGKTFLNILQSLHSP*PNSSWA
Trigger: TGCCCAGGAGGAGTTCGGGCAAGGCGAGTGGAGCGA...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGAGGCTTGTCGCATTTaGAGAATCTCTGAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTEACRI*RISEEN
Trigger: ATTCTCTTCAGAGATTCTGCAAATGCGACAAGCCTC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTGCAATCTCGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGAISAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCGAGATTGC...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGCGCGCCCGGCCATCCTaGCTTTTTGCCAACCTAAGA +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMRARPS*LFANLR
Trigger: TCTTAGGTTGGCAAAAAGGCAGGATGGCCGGGCGCG...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGGGTAGAAATGCCCCGTaGATTGAGACACATGTTCAG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKGRNAP*IETHVQ
Trigger: CTGAACATGTGTCTCAATGCACGGGGCATTTCTACC...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTTCAAGGCAGTGGGGGTaGTGCAGAAACACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMASRQWG*CRNTGR
Trigger: TCTACCTGTGTTTCTGCAGCACCCCCACTGCCTTGA...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTCGGCTACCACTCCATaGTCCCGCAGAGGCGGACAG +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPSATTP*SRRGGQ
Trigger: CTGTCCGCCTCTGCGGGACCATGGAGTGGTAGCCGA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGCCCATCTGCTGGGGTaGGAGCCTGCAGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVAHLLG*EPAAGF
Trigger: GAAGCCGGCTGCAGGCTCCCACCCCAGCAGATGGGC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAATACTGGCACGGCTCCTaGAAGTCTTCGGCCGGACTG +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKYWHGS*KSSAGL
Trigger: CAGTCCGGCCGAAGACTTCCAGGAGCCGTGCCAGTA...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGCAGCTGGAGGACTCCTaGATTCTGTCCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMQLEDS*ILSKAC
Trigger: GCACGCCTTGGACAGAATCCAGGAGTCCTCCAGCTG...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTCAGGGTCCAGGCTGCTaGTGCCACCCAGCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPQGPGC*CHPASY
Trigger: ATAGCTGGCTGGGTGGCACCAGCAGCCTGGACCCTG...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACGGCTGGAGGAGGCTTTaGCTGGAAATCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNGWRRL*LEIHPT
Trigger: GGTGGGATGGATTTCCAGCCAAAGCCTCCTCCAGCC...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCGATGAAACGATGCAGTaGGCCAGGAGCATGGCGGCT +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPDETMQ*ARSMAA
Trigger: AGCCGCCATGCTCCTGGCCCACTGCATCGTTTCATC...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGAGAAGAGAGAACATTaGTTTTCAGAGGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: SPGVEPSARLFREAKGRTEKREH*FSEAVI
Trigger: GATCACAGCCTCTGAAAACCAATGTTCTCTCTTCTC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGAGAAGAATCTTGCACTaGGAGGCTTGTCGCATTTGC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKRRILH*EACRIC
Trigger: GCAAATGCGACAAGCCTCCCAGTGCAAGATTCTTCT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCAGCATCCTCCCCACCTaGGTTAGCCTTCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPSILPT*VSLLDV
Trigger: CACGTCCAGAAGGCTAACCCAGGTGGGGAGGATGCT...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGCTGCAGCCGGCTTCCTaGGCACCCAGTGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVLQPAS*APSEQW
Trigger: CCACTGTTCACTGGGTGCTCAGGAAGCCGGCTGCAG...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTCGTGGATGACACAGTaGTGCTGGAGGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMSWMTQ*CWRSLT
Trigger: GGTCAAGGACCTCCAGCATCACTGTGTCATCCACGA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAGCTTCCACGTCTTCTTaGACCTGGGAGGCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKASTSS*TWEACR
Trigger: GCGACAAGCCTCCCAGGTTCAAGAAGACGTGGAAGC...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR TCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTGGGCCAAGAGCTCTCTaGGTTACCAAAGGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGGPRAL*VTKGLV
Trigger: GACGAGGCCTTTGGTAACTCAGAGAGCTCTTGGCCC...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGATTCTGTCCAAGGCGTaGCCATGGCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVILSKA*PWPPGS
Trigger: GGAGCCCGGAGGCCATGGGCACGCCTTGGACAGAAT...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCAGTACGGCGGATGCATaGTTGTCTTGCCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTSTADA*LSCLPS
Trigger: TGAAGGAAGGCAAGACAAGCATGCATCCGCCGTACT...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GATAAAGAAAGCGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTGAGTTACCGCTAGCATGGTTCTaGCCGGCTTTGGTAACACCA +
Preference number: 4 (lower is better)
Translates to: DKESVRASPHQGQELSELPLAWF*PALVTP
Trigger: TGGTGTTACCAAAGCCGGGCAGAACCATGCTAGCGG...TAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACGCTTTCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACTTTGGAGATCAAAGCTaGCTAGCTCTTGGCAATAAT +
Preference number: 4 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDFGDQS*LALGNN
Trigger: ATTATTGCCAAGAGCTAGGCAGCTTTGATCTCCAAA...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTCGTTTCACGTCTGGCTaGGTGGCAGATGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGRFTSG*VADGYR
Trigger: CCTGTAGCCATCTGCCACGCAGCCAGACGTGAAACG...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGAAGACAGCAGGGAAGTaGCAGAGGCTCCGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMKTAGK*QRLRVN
Trigger: GTTCACACGGAGCCTCTGGCACTTCCCTGCTGTCTT...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGCTCCCGACACTACTaGCGACGCACATGGACACTA +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPCSRHY*RRTWTL
Trigger: TAGTGTCCATGTGCGTCGCCAGTAGTGTCGGGAGCA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTACCCCTGAGATAAGCTaGCATGGCAGTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMATPEIS*HGSEKH
Trigger: ATGCTTCTCACTGCCATGCCAGCTTATCTCAGGGGT...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GATAAAGAAAGCGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTGAGTTATCACGTCTGGCTGCGTaGCAGATGGCTACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: DKESVRASPHQGQELSELSRLAA*QMATGV
Trigger: AACACCTGTAGCCATCTGCCACGCAGCCAGACGTGA...TAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACGCTTTCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAACTCCACCTGGAGCTaGTGTCAGCATCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGNSTWS*CQHPPH
Trigger: GTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGTT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACACCACCAACTCCACCTaGAGCTGGTGTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNTTNST*SWCQHP
Trigger: AGGATGCTGACACCAGCTCCAGGTGGAGTTGGTGGT...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGAAACTCCCTGGTGCTaGTGCCCAGCCGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVETPWC*CPAARR
Trigger: CCTCCGTGCGGCTGGGCACCAGCACCAGGGAGTTTC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTTCCTGAGCACCCAGTaGACAGTGGCATTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMFLSTQ*TVALSS
Trigger: GGAAGACAATGCCACTGTTCACTGGGTGCTCAGGAA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAATCGTGGATGACACAGTaGTGCTGGAGGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKSWMTQ*CWRSLT
Trigger: GGTCAAGGACCTCCAGCATCACTGTGTCATCCACGA...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCAAGCTGGCATGGCAGTaGGAAGCATCTTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACKLAWQ*EASFAE
Trigger: CTCAGCAAAAGATGCTTCTCACTGCCATGCCAGCTT...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTTTACCCAGGTTCAGCTaGCAACAAACAAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMALPRFS*QQTKLQ
Trigger: CTGCAGCTTTGTTTGTTGTCAGCTGAACCTGGGTAA...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTGCTTCCACGTCTTCTTaGACCTCAGAACAATGGCAA +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMAASTSS*TSEQWQ
Trigger: TTGCCATTGTTCTGAGGTTCAAGAAGACGTGGAAGC...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCGATGCATGCTTGTCTTaGCTTCCTTCAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVADACLS*LPSEPA
Trigger: TGCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATC...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTGGAAGATGAAACGATaGAGTGGGCCAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMWKMKR*SGPGAW
Trigger: CCATGCTCCTGGCCCACTGCATCGTTTCATCTTCCA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCAAAGCCAATGCAGTTaGCTCTGTATTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKQSQCS*LCIQQM
Trigger: CATTTGCTGAATACAGAGGCAACTGCATTGGCTTTG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTCTCACCTGAGGTCCTaGAACCCAAAGCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPSHLRS*NPKPMQ
Trigger: CTGCATTGGCTTTGGGTTGCAGGACCTCAGGTGAGA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCAGGCAGTGGGGGTGCTaGAGAAACACAGGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACRQWGC*RNTGRN
Trigger: ATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAAGCGGCGGACGGTCCTaGCAACGCAGGAAAACATTT +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKSGGRS*QRRKTF
Trigger: AAATGTTTTCCTGCGTTGCCAGGACCGTCCGCCGCT...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGAGTCACGCTGTCTCCTaGCAGACTGGTCAGCACGCC +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVSHAVS*QTGQHA
Trigger: GGCGTGCTGACCAGTCTGCCAGGAGACAGCGTGACT...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGGAGAAGAGAGAACATTaGTTTTCAGAGGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKEKREH*FSEAVI
Trigger: GATCACAGCCTCTGAAAACCAATGTTCTCTCTTCTC...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTCTCAGAAACTTTATGTaGTGGGATGGGAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMALRNFM*WDGREP
Trigger: TGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAG...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCTCACATTGCCCAGGCTaGTCTCAAACTTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVASHCPG*SQTSGL
Trigger: GAGTCCAGAAGTTTGAGATCAGCCTGGGCAATGTGA...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCAGACAAGCCCAGCAATaGAAATCACGGCTTACTGAA +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTRQAQQ*KSRLTE
Trigger: TTCAGTAAGCCGTGATTTTCATTGCTGGGCTTGTCT...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTATGGTAGAGACCCTGTaGCCCTCTCCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPMVETL*PSPLLP
Trigger: AGGAAGGAGAGGAGAGGGGCACAGGGTCTCTACCAT...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACCGTCAACATAGCCAGTaGTACCCCTGGACACATTTC +
Preference number: 4 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNRQHSQ*YPWTHF
Trigger: GAAATGTGTCCAGGGGTAGCACTGGCTATGTTGACG...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCTTAGCCTTCTGGACGTaGTGTGAGATAATAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTLAFWT*CEIIEL
Trigger: GAGCTCTATTATCTCACAGCACGTCCAGAAGGCTAA...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTGGGTGCAGGGCTCTTaGCTCAAAGGGTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPWVQGS*LKGSQV
Trigger: AACCTGTGACCCTTTGAGGCAAGAGCCCTGCACCCA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTAACAGCCTTGTGACATaGTGTTCCAATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMANSLVT*CSNPFL
Trigger: GAGGAAAGGATTGGAACAGCATGTCACAAGGCTGTT...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGCAGCTGGAGGACTCCTaGATTCTGTCCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVQLEDS*ILSKAC
Trigger: GCACGCCTTGGACAGAATCCAGGAGTCCTCCAGCTG...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGTGCCTGCATGGGGGTaGACACCTCGTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVVPAWG*TPRSQL
Trigger: CAGCTGAGAACGAGGTGTCCACCCCCATGCAGGCAC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGGTTCTCTTCACAGTaGCCCAAGTTCACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPWFSSQ*PKFTLA
Trigger: GGCTAGAGTGAACTTGGGCCACTGTGAAGAGAACCA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTCTCTCCATAACCACCTaGGGGAGTAGTCACACGCTG +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPLSITT*GSSHTL
Trigger: CAGCGTGTGACTACTCCCCCAGGTGGTTATGGAGAG...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACCTTTATGTGGTGGGATaGGAGGGAACCACCATAACC +
Preference number: 4 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNLYVVG*EGTTIT
Trigger: GGTTATGGTGGTTCCCTCCCATCCCACCACATAAAG...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGTCGGCCGGACTGTTCTaGAACTTCCTCACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVSAGLF*NFLTKS
Trigger: GCTCTTGGTGAGGAAGTTTCAGAACAGTCCGGCCGA...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTTGGAAAGGGAGGTTTaGAACCTCAACCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPLEREV*NLNQLN
Trigger: GTTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCTTACCCAGGTTCAGCTaGCAACAAACAAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVALPRFS*QQTKLQ
Trigger: CTGCAGCTTTGTTTGTTGTCAGCTGAACCTGGGTAA...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTGGAAGATGAAACGATaGAGTGGGCCAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPWKMKR*SGPGAW
Trigger: CCATGCTCCTGGCCCACTGCATCGTTTCATCTTCCA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACATCCTGCTTCAATTCTTaGAGAGCTGAATCAACTCAA +
Preference number: 4 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETSCFNS*RAESTQ
Trigger: TTGAGTTGATTCAGCTCTGCAAGAATTGAAGCAGGA...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACCAAAGGGTCACAGGTTaGCCCTGCATCTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNQRVTG*PCISKL
Trigger: TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTG...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTGGCAGGAGAACTTCTaGGACTCCTGGGAATACTGG +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPWQENF*DSWEYW
Trigger: CCAGTATTCCCAGGAGTCCCAGAAGTTCTCCTGCCA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGTGCTCCCGACACTACTaGCGACGCACATGGACACTA +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVCSRHY*RRTWTL
Trigger: TAGTGTCCATGTGCGTCGCCAGTAGTGTCGGGAGCA...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACTAGCCCCTTTAAGCTaGGCATTTGGAAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKLAPLS*AFGKGG
Trigger: ACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAG...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGGCTGGAGGAGGCTTTaGCTGGAAATCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVGWRRL*LEIHPT
Trigger: GGTGGGATGGATTTCCAGCCAAAGCCTCCTCCAGCC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCCAGCACCAAAGCAGCTaGGAAGACATTCCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPQHQSS*EDIPEH
Trigger: ATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTG...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CAA 72 bp CCTGAGATAAGCTGGCATGGCAGTGAGAAGCATCTTTaGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PEISWHGSEKHL*LSPFVFYHPQG
Trigger: ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCCATGCCAGCTTATCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CAA 72 bp GGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATaGAGACACATGTTCAGTCACCACAGATTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GAAETQVEMPRA*RHMFSHHRLEN
Trigger: GTTCTCTAATCTGTGGTGACTGAACATGTGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGTTGTGAATGTCTTTaGCCGTTCAGCCCGATATCT +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPCCECL*PFSPIS
Trigger: AGATATCGGGCTGAACGGTCAAAGACATTCACAACA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCACAGCTGGAGCAGGCTaGTTTTCCCCTGGCGTAGAA +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVTAGAG*FSPGVE
Trigger: TTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGT...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCGTGTCCAAAGAGTCTTaGTATGGTTCTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACVSKES*YGSLHS
Trigger: ACTGTGAAGAGAACCATATCAAGACTCTTTGGACAC...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCGCAGTAAAACCGTTTTaGTCTCAGAAATGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACAVKPF*SQKWQK
Trigger: CTTCTGCCATTTCTGAGATCAAAACGGTTTTACTGC...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTCACATTGCCCAGGCTaGTCTCAAACTTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPSHCPG*SQTSGL
Trigger: GAGTCCAGAAGTTTGAGATCAGCCTGGGCAATGTGA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTTTGCCAACCTAAGATaGGTTGCCTCAAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMFANLR*VASSSN
Trigger: ATTGCTGCTTGAGGCAACTCATCTTAGGTTGGCAAA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGAAATGCCCCGTGCATTaGGACACATGTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: IIELSTKAAGKTFLNILQKCPVH*DTCSVT
Trigger: GGTGACTGAACATGTGTCTCAATGCACGGGGCATTT...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGCCAGAGGCTCCGTGTaGACTCAGAGCCTGATAAAG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVARGSV*TQSLIK
Trigger: CTTTATCAGGCTCTGAGTTCACACGGAGCCTCTGGC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGTTTATTAGTAGTAAGTaGCTGCATGGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: PTCPAFECPCECPKSLDMFISSK*LHGGGH
Trigger: GTGTCCACCCCCATGCAGGCACTTACTACTAATAAA...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTTTATTAGTAGTAAGTaGCTGCATGGGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPFISSK*LHGGGH
Trigger: GTGTCCACCCCCATGCAGGCACTTACTACTAATAAA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTAAAGAGTACGGCGGATaGATGCTTGTCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPKEYGG*MLVLPS
Trigger: GGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTT...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAGTCACAGGTTGCCCCTaGATCTCCAAATTAAGACCA +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKVTGCP*ISKLRP
Trigger: TGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGAC...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCAATATACTGACCCTTTaGCCCATATACAGACATCAG +
Preference number: 4 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTNILTL*PIYRHQ
Trigger: CTGATGTCTGTATATGGGGCAAAGGGTCAGTATATT...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGATCTCAAACTTCTaGACTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVALISNF*TQVILL
Trigger: CAGGAGGATCACTTGAGTCCAGAAGTTTGAGATCAG...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAGAAACTTTATGTGGTaGGATGGGAGGGAACCACCA +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGRNFMW*DGREPP
Trigger: TGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGTGGCTGCGTGGCAGATaGCTACAGGTGTTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVWLRGR*LQVLGK
Trigger: TTTGCCTAACACCTGTAGCCATCTGCCACGCAGCCA...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCTGTTCACTACCAGGTaGGCTTCCAGCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVLFTTR*ASSLVP
Trigger: TGGAACCAGGCTGGAAGCCCACCTGGTAGTGAACAG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAAAAACGACCAGGCCCTaGGATACTGTATTATTCACC +
Preference number: 4 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKKTTRP*DTVLFT
Trigger: GGTGAATAATACAGTATCTCAGGGCCTGGTCGTTTT...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCGCAGTAAAACCGTTTTaGTCTCAGAAATGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPAVKPF*SQKWQK
Trigger: CTTCTGCCATTTCTGAGATCAAAACGGTTTTACTGC...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCAACGGTATAAAGAATTaGAGAACTGTGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: KSQKLYVVGWEGTTITACNGIKN*RTVGTE
Trigger: TTCTGTGCCCACAGTTCTTCAATTCTTTATACCGTT...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGATGCATGCTTGTCTTaGCTTCCTTCAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVDACLS*LPSEPA
Trigger: TGCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTACAGAATCACCCTTACTaGAGATTCTCATTCTTAATA +
Preference number: 4 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLQNHPY*RFSFLI
Trigger: TATTAAGAATGAGAATCTGCAGTAAGGGTGATTCTG...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCTGGCAGGAGAACTTCTaGGACTCCTGGGAATACTGG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVWQENF*DSWEYW
Trigger: CCAGTATTCCCAGGAGTCCCAGAAGTTCTCCTGCCA...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTTACTGGCGACGCACATaGACACTATGTAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPYWRRT*TLCRKS
Trigger: GCTCTTTCTACATAGTGTCCATGTGCGTCGCCAGTA...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCAGGCTGATTTTCCCCTaGCGTAGAACCTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVRLIFP*RRTFRK
Trigger: CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCT...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCAACCAGCTGAACAGCTaGAGCAGGCTGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVNQLNS*SRLIFP
Trigger: GGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTGGTT...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CAA 72 bp CAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTaGATATGGTTCTCTTCACAGTGGCCCAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: QLLSVRVSVQRV*IWFSSQWPKFT
Trigger: AGTGAACTTGGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGTGTTGTGAATGTCTTTaGCCGTTCAGCCCGATATCT +
Preference number: 4 (lower is better)
Translates to: IIELSTKAAGKTFLNILQCCECL*PFSPIS
Trigger: AGATATCGGGCTGAACGGTCAAAGACATTCACAACA...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCACCGTAAACAAAACATaGTCACTTTCATCCTTTCGC +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVATVNKT*SLSSFR
Trigger: GCGAAAGGATGAAAGTGACCATGTTTTGTTTACGGT...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTAGAATTGAAGAACTGTaGGCACAGAATCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGRIEEL*AQNHPY
Trigger: GTAAGGGTGATTCTGTGCCCACAGTTCTTCAATTCT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCGTTCAGCCCGATATCTaGGCTCAAACCGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLVQPDI*AQTVVC
Trigger: ACAGACTACGGTTTGAGCTCAGATATCGGGCTGAAC...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCGACAACAAACAAAGCTaGAGTAAAACCGTTTTGATC +
Preference number: 4 (lower is better)
Translates to: ECPCECPKSLDMVLFTVADNKQS*SKTVLI
Trigger: GATCAAAACGGTTTTACTGCAGCTTTGTTTGTTGTC...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GATAAAGAAAGCGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTGAGTTAGACAACAAACAAAGCTaGAGTAAAACCGTTTTGATC +
Preference number: 4 (lower is better)
Translates to: DKESVRASPHQGQELSELDNKQS*SKTVLI
Trigger: GATCAAAACGGTTTTACTGCAGCTTTGTTTGTTGTC...TAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACGCTTTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGCTGATCTCAAACTTCTaGACTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FECPCECPKSLDMVLFTVLISNF*TQVILL
Trigger: CAGGAGGATCACTTGAGTCCAGAAGTTTGAGATCAG...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGGAGTAGTCACACGCTaGTTTTTCCCTAGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVGVVTR*FFPRVE
Trigger: CTCTACTCTAGGGAAAAACCAGCGTGTGACTACTCC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCAAAGCAATAACAATTTaGAGATCAAAGCTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPKAITI*RSKLPS
Trigger: GCTAGGCAGCTTTGATCTCCAAATTGTTATTGCTTT...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCAGTAGTCTGTATTGCTaGTGTCATAAGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLSSLYC*CHKGSV
Trigger: CACGGAGCCCTTATGACATCAGCAATACAGACTACT...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCAAAACGACCAGGCCCTaGGATACTGTATTATTCACC +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVKTTRP*DTVLFT
Trigger: GGTGAATAATACAGTATCTCAGGGCCTGGTCGTTTT...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR GCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCGCCATCCTGCCTTTTTaGCAACCTAAGATGAGTTGC +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLAILPF*QPKMSC
Trigger: GCAACTCATCTTAGGTTGGCAAAAAGGCAGGATGGC...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCTACTGGCGACGCACATaGACACTATGTAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLYWRRT*TLCRKS
Trigger: GCTCTTTCTACATAGTGTCCATGTGCGTCGCCAGTA...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCAGAAGCATCTTTTGCTaGGCCCGTTTGTGTTTTATC +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVRSIFC*ARLCFI
Trigger: GATAAAACACAAACGGGCTCAGCAAAAGATGCTTCT...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCCCATGGTTACACGGCTaGTTTAAATCATATCCCCAC +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLPWLHG*FKSYPH
Trigger: GTGGGGATATGATTTAAATCAGCCGTGTAACCATGG...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR GCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCAAAGCCAATGCAGTTaGCTCTGTATTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVQSQCS*LCIQQM
Trigger: CATTTGCTGAATACAGAGGCAACTGCATTGGCTTTG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
3UTR CAA 72 bp TTAAATCATATCCCCACTCTGGAATACCCTGATAACTaGAGAGCTAACTGGGTAACCACTAACACCACTGAA +
Preference number: 4 (lower is better)
Translates to: LNHIPTLEYPDN*RANWVTTNTTE
Trigger: TTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATCAGGGTATTCCAGAGTGGGGATATGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCAGCCAGTGCTACCCCTaGACACATTTCTTGAAAATA +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLSQCYP*THFLKI
Trigger: TATTTTCAAGAAATGTGTCCAGGGGTAGCACTGGCT...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR TCA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCAAGTTACTTCTATGCTaGCACAGCGAATATTGGATA +
Preference number: 4 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVKLLLC*HSEYWI
Trigger: TATCCAATATTCGCTGTGTCAGCATAGAAGTAACTT...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR TCA 90 bp GATAACTTGAGAGCTAACTGGGTAACCACTAACACCACTGAATTTTCAAAGCTCAAGTTACTTCTATGCTaGCACAGCGAATATTGGATA +
Preference number: 4 (lower is better)
Translates to: DNLRANWVTTNTTEFSKLKLLLC*HSEYWI
Trigger: TATCCAATATTCGCTGTGTCAGCATAGAAGTAACTT...GAGCTTTGAAAATTCAGTGGTGTTAGTGGTTACCCAGTTAGCTCTCAAGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
3UTR CAA 72 bp AGATTCTCATTCTTAATATTTCCCTTTAACAGCATTTaGCTGTTCTCAAGTCTCAGAAACTTTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RFSFLIFPFNSI*LFSSLRNFMWW
Trigger: CCACCACATAAAGTTTCTGAGACTTGAGAACAGCAAAATGCTGTTAAAGGGAAATATTAAGAATGAGAATCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS CCA 90 bp CGTCTCTGGGCCGTCCCAGGGTGCGGTTACGAAAGCCGGAGCGGATaGCGCAACAGCCCCGCGCACCGGCCGACCGAGGGGGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLWAVPGCGYESRSG*RNSPAHRPTEGVAS
Trigger: GGAAGCCACCCCCTCGGTCGGCCGGTGCGCGGGGCTGTTGCGCCATCCGCTCCGGCTTTCGTAACCGCACCCTGGGACGGCCCAGAGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 90 bp GCCTCCGGGCTCCACTCGCTCCACTCGCCTTGCCCGAACTCCTCCTaGGCACGAAGCTGCACCACGTGCCTCAGGCCGCTCCAGGCGTCG +
Preference number: 5 (lower is better)
Translates to: ASGLHSLHSPCPNSS*ARSCTTCLRPLQAS
Trigger: CGACGCCTGGAGCGGCCTGAGGCACGTGGTGCAGCTTCGTGCCCAGGAGGAGTTCGGGCAAGGCGAGTGGAGCGAGTGGAGCCCGGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000476006.5
ENST00000515190.1
ENST00000622330.4
CDS CCA 90 bp GTCTTCCGGCTCTACCCCCGGGCAGGTCAGAGTCACGCTGTCTCCTaGCAGACTGGTCAGCACGCCTCTCGCCACCTCCTGCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VFRLYPRAGQSHAVS*QTGQHASRHLLRRA
Trigger: TGCCCTGCGCAGGAGGTGGCGAGAGGCGTGCTGACCAGTCTGCCAGGAGACAGCGTGACTCTGACCTGCCCGGGGGTAGAGCCGGAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000512471.1
ENST00000622330.4
CDS GCA 90 bp ACATTTGAGGAACTCGCGCTGGAGCGTCTCTGGGCCGTCCCAGGGTaGGGTTACGAAAGCCGGAGCGGATGGCGCAACAGCCCCGCGCAC +
Preference number: 5 (lower is better)
Translates to: TFEELALERLWAVPG*GYESRSGWRNSPAH
Trigger: GTGCGCGGGGCTGTTGCGCCATCCGCTCCGGCTTTCGTAACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS-3UTR CAA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGCAGTGACTGTGATGTaGGCAGGCGGATCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LGWVEASPGPAAPKSTADAVTVM*AGGSGC
Trigger: GCAGCCTGATCCGCCTGCCAACATCACAGTCACTGC...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS TCA 90 bp CATGACTCAGAGCGGCGGACGGTCCTGGCAACGCAGGAAAACATTTaGGGAACTCGCGCTGGAGCGTCTCTGGGCCGTCCCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: HDSERRTVLATQENI*GTRAGASLGRPRVR
Trigger: CCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCAGGACCGTCCGCCGCTCTGAGTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 90 bp ATCCTGGGCAACGAGGAGAAAGCCTGTCTGTCCAAGGCGTGCCCATaGCCTCCGGGCTCCACTCGCTCCACTCGCCTTGCCCGAACTCCT +
Preference number: 5 (lower is better)
Translates to: ILGNEEKACLSKACP*PPGSTRSTRLARTP
Trigger: AGGAGTTCGGGCAAGGCGAGTGGAGCGAGTGGAGCCCGGAGGCCATGGGCACGCCTTGGACAGACAGGCTTTCTCCTCGTTGCCCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622330.4
CDS GCA 90 bp GGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATaGATGCTTGTCTTGCCTTCCTTCAGAGCCCGCAGCTTCCACGTC +
Preference number: 5 (lower is better)
Translates to: GRGLSGTSCPKEYGG*MLVLPSFRARSFHV
Trigger: GACGTGGAAGCTGCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000502679.1
ENST00000507256.1
CDS CCA 90 bp TGGCAACGCAGGAAAACATTTGAGGAACTCGCGCTGGAGCGTCTCTaGGCCGTCCCAGGGTGCGGTTACGAAAGCCGGAGCGGATGGCGC +
Preference number: 5 (lower is better)
Translates to: WQRRKTFEELALERL*AVPGCGYESRSGWR
Trigger: GCGCCATCCGCTCCGGCTTTCGTAACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 90 bp GCGGACGGTCCTGGCAACGCAGGAAAACATTTGAGGAACTCGCGCTaGAGCGTCTCTGGGCCGTCCCAGGGTGCGGTTACGAAAGCCGGA +
Preference number: 5 (lower is better)
Translates to: ADGPGNAGKHLRNSR*SVSGPSQGAVTKAG
Trigger: TCCGGCTTTCGTAACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCAGGACCGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS-3UTR CAA 90 bp TGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGGCTGCTAGCTCTCCTTaGTGGGAGGTGGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: WGGSRPLRDQLPQRVRRMAASSP*WEVEKR
Trigger: TCTCTTCTCCACCTCCCACAAAGGAGAGCTAGCAGC...CATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CAA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACCCAAGAGCACAGCCTTaGTCGTCAGGGATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDPRAQP*SSGMGC
Trigger: GCACCCCATCCCTGACGACAAAGGCTGTGCTCTTGG...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATTTGAACCTGGGAGGCTaGTCGCATTTGCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: LGWVEASPGPAAPKSTADLNLGG*SHLQNL
Trigger: GAGATTCTGCAAATGCGACAAGCCTCCCAGGTTCAA...ATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CAA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGGCTTGTGCAGAGGTGTaGAGGGGTGGGCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKACAEV*RGGLPA
Trigger: GGCTGGCAGCCCACCCCTCAACACCTCTGCACAAGC...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGGATGCATGCTTGTCTaGCCTTCCTTCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: SPGVEPSARLFREAKGRTGCMLV*PSFRAR
Trigger: GCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATCC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGCCAAGAGCACAGCCTTaGTCGTCAGGGATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKPRAQP*SSGMGC
Trigger: GCACCCCATCCCTGACGACAAAGGCTGTGCTCTTGG...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp ACTCCACCTGGAGCTGGTGTCAGCATCCTCCCCACCTGGGTTAGCCTTCTGGACCTGGCATCTGGTCGGTaGTGGCTCGAGGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: TPPGAGVSILPTWVSLLDLASGR*WLEVLS
Trigger: TGACAATACCTCGAGCCACAACCGACCAGATGCCAG...GTCCAGAAGGCTAACCCAGGTGGGGAGGATGCTGACACCAGCTCCAGGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACAGCTGCTAGCTCTCCTTaGTGGGAGGTGGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SPGVEPSARLFREAKGRTAASSP*WEVEKR
Trigger: TCTCTTCTCCACCTCCCACAAAGGAGAGCTAGCAGC...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS CCA 90 bp AGAGGAGCGTTCCGAAGGCCAGGCTCCCTCCAGCAACCAGGAATGTaGGCAGTGGTACTGAAGAAGAATCTTGCACTGGGAGGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: RGAFRRPGSLQQPGM*AVVLKKNLALGGLS
Trigger: CGACAAGCCTCCCAGTGCAAGATTCTTCTTCAGTACCACTGCCCACATTCCTGGTTGCTGGAGGGAGCCTGGCCTTCGGAACGCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368485.8
ENST00000507256.1
ENST00000515190.1
CDS-3UTR CAA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCGCTTGTGCAGAGGTGTaGAGGGGTGGGCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPACAEV*RGGLPA
Trigger: GGCTGGCAGCCCACCCCTCAACACCTCTGCACAAGC...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCCCCTGGCGTAGAACCTTCCGCAAGGCTCTTCCGTGAAGCCAAAGGCCGCACATCAAAGGGTCACAGGTaGCCCCTGCATCTCCAAATT +
Preference number: 5 (lower is better)
Translates to: SPGVEPSARLFREAKGRTSKGHR*PLHLQI
Trigger: AATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGA...TGTGCGGCCTTTGGCTTCACGGAAGAGCCTTGCGGAAGGTTCTACGCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGCTCGCTCCACTCGCCTaGCCCGAACTCCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: IIELSTKAAGKTFLNILQLAPLA*PELLLG
Trigger: GCCCAGGAGGAGTTCGGGCAAGGCGAGTGGAGCGAG...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACACAACCTGCCCAGCTTTaGAGTGTCCGTGTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETQPAQL*SVRVSV
Trigger: GACACTCACACGGACACTCAAAAGCTGGGCAGGTTG...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS TCA 90 bp GGATTCCACCACTTGGCAAGAGAGACACCTCAAGCTCAGGGTTTCTaGGCGCCTGTGGCTAGCCACAGACTCCTACTCACTTTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GFHHLARETPQAQGF*APVASHRLLLTFRV
Trigger: CACTCTGAAAGTGAGTAGGAGTCTGTGGCTAGCCACAGGCGCTCAGAAACCCTGAGCTTGAGGTGTCTCTCTTGCCAAGTGGTGGAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502679.1
CDS-3UTR CAA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTTGGTTCTGCCCGGCTTaGGTAACACCACATGTGGGT +
Preference number: 5 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMAWFCPA*VTPHVG
Trigger: ACCCACATGTGGTGTTACCAAAGCCGGGCAGAACCA...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS CCA 90 bp ACTTGGCAAGAGAGACACCTCAAGCTCAGGGTTTCTGAGCGCCTGTaGCTAGCCACAGACTCCTACTCACTTTCAGAGTGGCTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: TWQERHLKLRVSERL*LATDSYSLSEWLFW
Trigger: CCAGAAAAGCCACTCTGAAAGTGAGTAGGAGTCTGTGGCTAGCCACAGGCGCTCAGAAACCCTGAGCTTGAGGTGTCTCTCTTGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502679.1
CDS-3UTR CAA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAGCAGTGACTGTGATGTaGGCAGGCGGATCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKAVTVM*AGGSGC
Trigger: GCAGCCTGATCCGCCTGCCAACATCACAGTCACTGC...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCTCGCTCCACTCGCCTaGCCCGAACTCCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVLAPLA*PELLLG
Trigger: GCCCAGGAGGAGTTCGGGCAAGGCGAGTGGAGCGAG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp GATAAAGAAAGCGTAAGGGCAAGTCCCCATCAGGGCCAAGAGCTCTCTGAGTTATTGTGGCTCGAGGTATaGTCAGACCCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DKESVRASPHQGQELSELLWLEV*SDPRLL
Trigger: CAGCAGCCTGGGGTCTGACAATACCTCGAGCCACAA...TAACTCAGAGAGCTCTTGGCCCTGATGGGGACTTGCCCTTACGCTTTCTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp GGTCGAGGCCTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGCATGCTTCACACTCTACCACACTaGGCTAATTTTTATGCTTTT +
Preference number: 5 (lower is better)
Translates to: GRGLSGTSCPKEYGGCMLHTLPH*ANFYAF
Trigger: AAAAGCATAAAAATTAGCCAAGTGTGGTAGAGTGTG...AAGCATGCATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAGGCCTCGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CAA 90 bp CCCAAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAAGGATGCATGCTTGTCTaGCCTTCCTTCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: PKFTLAPLSWAFGKGGLKGCMLV*PSFRAR
Trigger: GCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATCC...TTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACACGGCGGATGCATGCTaGTCTTGCCTTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNTADAC*SCLPSE
Trigger: CTCTGAAGGAAGGCAAGACAAGCATGCATCCGCCGT...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp GGTGCAGGGCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGCTTCCACGTCTTCTaGAACCTCAGAACAATGGCA +
Preference number: 5 (lower is better)
Translates to: GAGLLPQRVTGCPCISKLSFHVF*NLRTMA
Trigger: TGCCATTGTTCTGAGGTTCAAGAAGACGTGGAAGCT...TAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGCCCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCAACGCAGGAAAACATTaGAGGAACTCGCGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ECPCECPKSLDMVLFTVANAGKH*RNSRWS
Trigger: GCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTT...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CAA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTACGGCGGATGCATGCTaGTCTTGCCTTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGTADAC*SCLPSE
Trigger: CTCTGAAGGAAGGCAAGACAAGCATGCATCCGCCGT...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AGGCAGTGGGGGTGCTGCAGAAACACAGGTAGAAATGCCCCGTGCATTGAGACATTTGGAAAGGGAGGTTaGAAACCTCAACCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: RQWGCCRNTGRNAPCIETFGKGG*KPQPAE
Trigger: TTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAAA...TGTCTCAATGCACGGGGCATTTCTACCTGTGTTTCTGCAGCACCCCCACTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp GGCAGTGAGAAGCATCTTTTGCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTCAACCTGCCCAGCTTTaGAGTGTCCGTGTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GSEKHLLLSPFVFYHPQGQPAQL*SVRVSV
Trigger: GACACTCACACGGACACTCAAAAGCTGGGCAGGTTG...ACCCTGTGGATGATAAAACACAAACGGGCTCAGCAAAAGATGCTTCTCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AGCTATCTGGATTTCACATCTTCCGCTAGCATGGTTCTGCCCGGCTTTGGTAACCTTGCACTGGGAGGCTaGTCGCATTTGCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: SYLDFTSSASMVLPGFGNLALGG*SHLQNL
Trigger: GAGATTCTGCAAATGCGACAAGCCTCCCAGTGCAAG...GTTACCAAAGCCGGGCAGAACCATGCTAGCGGAAGATGTGAAATCCAGATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS CCA 90 bp TTGTTTCTTAACAAAGCCCACTCTAGATTCCAGGATTCCACCACTTaGCAAGAGAGACACCTCAAGCTCAGGGTTTCTGAGCGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LFLNKAHSRFQDSTT*QERHLKLRVSERLW
Trigger: CCACAGGCGCTCAGAAACCCTGAGCTTGAGGTGTCTCTCTTGCCAAGTGGTGGAATCCTGGAATCTAGAGTGGGCTTTGTTAAGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502679.1
CDS-3UTR CAA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTAGCTTCCACGTCTTCTaGAACCTGGGAGGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPSFHVF*NLGGLS
Trigger: CGACAAGCCTCCCAGGTTCAAGAAGACGTGGAAGCT...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344086.8
CDS-3UTR CAA 90 bp AAGTCTCAGAAACTTTATGTGGTGGGATGGGAGGGAACCACCATAACCGCCTGCTGGGGTTTTATCACATaGCCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KSQKLYVVGWEGTTITACWGFIT*PRLISN
Trigger: GTTTGAGATCAGCCTGGGCAATGTGATAAAACCCCA...GCAGGCGGTTATGGTGGTTCCCTCCCATCCCACCACATAAAGTTTCTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGCACTCACAAACAACATaGCTGAGGGGGCTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: FECPCECPKSLDMVLFTVHSQTT*LRGLFR
Trigger: CCGGAAGAGCCCCCTCAGCAATGTTGTTTGTGAGTG...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp CAGCTGAACAGCTGGAGCAGGCTGATTTTCCCCTGGCGTAGAACCTTCCGCAAGAATTTGCTAAGGCACTaGGGTTTTAAGAGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: QLNSWSRLIFPWRRTFRKNLLRH*GFKSLS
Trigger: ACTCAAACTCTTAAAACCCAAGTGCCTTAGCAAATT...CTTGCGGAAGGTTCTACGCCAGGGGAAAATCAGCCTGCTCCAGCTGTTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCACTCACAAACAACATaGCTGAGGGGGCTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVHSQTT*LRGLFR
Trigger: CCGGAAGAGCCCCCTCAGCAATGTTGTTTGTGAGTG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCTGGCATCTGGTCGGTaGTGGCTCGAGGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVLASGR*WLEVLS
Trigger: TGACAATACCTCGAGCCACAACCGACCAGATGCCAG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCAGTGAGAAGCATCTTTaGCTGAGCCCGTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: ECPCECPKSLDMVLFTVASEKHL*LSPFVF
Trigger: AAACACAAACGGGCTCAGCAAAAGATGCTTCTCACT...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AACCTAAATGGTCTCTGTCTCAGCGTTTCACGTCTGGCTGCGTGGCAGATGGCTAAACGGTATAAAGAATaGAAGAACTGTGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: NLNGLCLSVSRLAAWQMAKRYKE*KNCGHR
Trigger: TCTGTGCCCACAGTTCTTCAATTCTTTATACCGTTT...AGCCATCTGCCACGCAGCCAGACGTGAAACGCTGAGACAGAGACCATTTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp CCAACCTGCCCAGCTTTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGAGTGTCCAAAGAGTCTaGATATGGTTCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: PTCPAFECPCECPKSLDMSVQRV*IWFSSQ
Trigger: CTGTGAAGAGAACCATATCAAGACTCTTTGGACACT...CATATCAAGACTCTTTGGACACTCACACGGACACTCAAAAGCTGGGCAGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp GCTCTTGCCTCAAAGGGTCACAGGTTGCCCCTGCATCTCCAAATTAAGACCACCCACACTCTACCACACTaGGCTAATTTTTATGCTTTT +
Preference number: 5 (lower is better)
Translates to: ALASKGHRLPLHLQIKTTHTLPH*ANFYAF
Trigger: AAAAGCATAAAAATTAGCCAAGTGTGGTAGAGTGTG...GGTGGTCTTAATTTGGAGATGCAGGGGCAACCTGTGACCCTTTGAGGCAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGAAATGCCCCGTGCATaGAGACACATGTTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: FECPCECPKSLDMVLFTVEMPRA*RHMFSH
Trigger: GTGACTGAACATGTGTCTCAATGCACGGGGCATTTC...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp ATAATAGAGCTCAGCACCAAAGCAGCTGGGAAGACATTCCTGAACATTCTCCAGAGTGAGAAGCATCTTTaGCTGAGCCCGTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: IIELSTKAAGKTFLNILQSEKHL*LSPFVF
Trigger: AAACACAAACGGGCTCAGCAAAAGATGCTTCTCACT...CTGGAGAATGTTCAGGAATGTCTTCCCAGCTGCTTTGGTGCTGAGCTCTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp GAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCTGCAGTAAAACCGTTTaGATCTCAGAAATGGCAGAA +
Preference number: 5 (lower is better)
Translates to: ECPCECPKSLDMVLFTVACSKTV*ISEMAE
Trigger: TTCTGCCATTTCTGAGATCAAAACGGTTTTACTGCA...GGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGGCCCTGCAGTAAAACCGTTTaGATCTCAGAAATGGCAGAA +
Preference number: 5 (lower is better)
Translates to: SVRVSVQRVLIWFSSQWPCSKTV*ISEMAE
Trigger: TTCTGCCATTTCTGAGATCAAAACGGTTTTACTGCA...GGGCCACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTCTGACACAGCGAATATaGGATATTCCACCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPLTQRI*DIPPSQ
Trigger: TTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAG...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp AAGTTCACTCTAGCCCCTTTAAGCTGGGCATTTGGAAAGGGAGGTTTGAAACCTAGTGTCCAAAGAGTCTaGATATGGTTCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: KFTLAPLSWAFGKGGLKPSVQRV*IWFSSQ
Trigger: CTGTGAAGAGAACCATATCAAGACTCTTTGGACACT...AGGTTTCAAACCTCCCTTTCCAAATGCCCAGCTTAAAGGGGCTAGAGTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCTGGGGTTTTATCACATaGCCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVWGFIT*PRLISN
Trigger: GTTTGAGATCAGCCTGGGCAATGTGATAAAACCCCA...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCTTTGGAAAGGGAGGTTaGAAACCTCAACCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVFGKGG*KPQPAE
Trigger: TTCAGCTGGTTGAGGTTTCAAACCTCCCTTTCCAAA...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCTGACACAGCGAATATaGGATATTCCACCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVLTQRI*DIPPSQ
Trigger: TTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCGAATACCCTGATAACTaGAGAGCTAACTGGGTAACC +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVEYPDN*RANWVT
Trigger: GGTTACCCAGTTAGCTCTCAAGTTATCAGGGTATTC...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp TCTATGCTGACACAGCGAATATTGGATATTCCACCCTCTCAAGAGAAAACAGTCCCCTTTAACAGCATTTaGCTGTTCTCAAGTCTCAGA +
Preference number: 5 (lower is better)
Translates to: SMLTQRILDIPPSQEKTVPFNSI*LFSSLR
Trigger: TCTGAGACTTGAGAACAGCAAAATGCTGTTAAAGGG...GACTGTTTTCTCTTGAGAGGGTGGAATATCCAATATTCGCTGTGTCAGCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGAAATATACTGACCCTTaGCCCCATATACAGACATCA +
Preference number: 5 (lower is better)
Translates to: FECPCECPKSLDMVLFTVKYTDP*PHIQTS
Trigger: TGATGTCTGTATATGGGGCAAAGGGTCAGTATATTT...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368485.8
CDS-3UTR CAA 90 bp TTTGAGTGTCCGTGTGAGTGTCCAAAGAGTCTTGATATGGTTCTCTTCACAGTGAATTTGCTAAGGCACTaGGGTTTTAAGAGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: FECPCECPKSLDMVLFTVNLLRH*GFKSLS
Trigger: ACTCAAACTCTTAAAACCCAAGTGCCTTAGCAAATT...CACTGTGAAGAGAACCATATCAAGACTCTTTGGACACTCACACGGACACTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000368485.8
CDS GCA 72 bp GCCCCCATCCGCAGGAGCCCGGCTCTCTACACACACTaGGAGTCCCTCGGCCCCGCGCCGCGCTCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: APIRRSPALYTH*ESLGPAPRSAP
Trigger: AGGAGCCGAGCGCGGCGCGGGGCCGAGGGACTCGCAGTGTGTGTAGAGAGCCGGGCTCCTGCGGATGGGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000622330.4
CDS CCA 72 bp GCCGTCCCAGGGTGCGGTTACGAAAGCCGGAGCGGATaGCGCAACAGCCCCGCGCACCGGCCGACCGAGGGG +
Preference number: 6 (lower is better)
Translates to: AVPGCGYESRSG*RNSPAHRPTEG
Trigger: CCCCTCGGTCGGCCGGTGCGCGGGGCTGTTGCGCCATCCGCTCCGGCTTTCGTAACCGCACCCTGGGACGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 72 bp CCGGGCAGGTCAGAGTCACGCTGTCTCCTGGCAGACTaGTCAGCACGCCTCTCGCCACCTCCTGCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGRSESRCLLAD*SARLSPPPAQG
Trigger: GCCCTGCGCAGGAGGTGGCGAGAGGCGTGCTGACCAGTCTGCCAGGAGACAGCGTGACTCTGACCTGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000512471.1
ENST00000622330.4
CDS GCA 72 bp GAACTCGCGCTGGAGCGTCTCTGGGCCGTCCCAGGGTaGGGTTACGAAAGCCGGAGCGGATGGCGCAACAGC +
Preference number: 6 (lower is better)
Translates to: ELALERLWAVPG*GYESRSGWRNS
Trigger: GCTGTTGCGCCATCCGCTCCGGCTTTCGTAACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 72 bp CTCCACTCGCTCCACTCGCCTTGCCCGAACTCCTCCTaGGCACGAAGCTGCACCACGTGCCTCAGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: LHSLHSPCPNSS*ARSCTTCLRPL
Trigger: GAGCGGCCTGAGGCACGTGGTGCAGCTTCGTGCCCAGGAGGAGTTCGGGCAAGGCGAGTGGAGCGAGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000476006.5
ENST00000515190.1
ENST00000622330.4
CDS GCA 72 bp CTCGGCTCCTCTCCCTCTGGCCCGGCTCAGTGTCAGTaGGACTTCCCACTCGCACATGACTCAGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: LGSSPSGPAQCQ*DFPLAHDSERR
Trigger: CCGCCGCTCTGAGTCATGTGCGAGTGGGAAGTCGCACTGACACTGAGCCGGGCCAGAGGGAGAGGAGCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000622330.4
CDS GCA 72 bp CTGGGCAACGAGGAGAAAGCCTGTCTGTCCAAGGCGTaGCCATGGCCTCCGGGCTCCACTCGCTCCACTCGC +
Preference number: 6 (lower is better)
Translates to: LGNEEKACLSKA*PWPPGSTRSTR
Trigger: GCGAGTGGAGCGAGTGGAGCCCGGAGGCCATGGGCACGCCTTGGACAGACAGGCTTTCTCCTCGTTGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622330.4
CDS CCA 72 bp TGGTCTGTGGAGAGAAGCCTGTCCAAGGCGTGCCCATaGCCTCCGGGCTCCACTCGCTCCACTCGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: WSVERSLSKACP*PPGSTRSTRLA
Trigger: GGCAAGGCGAGTGGAGCGAGTGGAGCCCGGAGGCCATGGGCACGCCTTGGACAGGCTTCTCTCCACAGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476006.5
CDS TCA 72 bp GAGCGGCGGACGGTCCTGGCAACGCAGGAAAACATTTaGGGAACTCGCGCTGGAGCGTCTCTGGGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: ERRTVLATQENI*GTRAGASLGRP
Trigger: GGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCAGGACCGTCCGCCGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS TCA 72 bp CCCGGCTCAGTGTCAGTGCGACTTCCCACTCGCACATaGCTCAGAGCGGCGGACGGTCCTGGCAACGCAGGA +
Preference number: 6 (lower is better)
Translates to: PGSVSVRLPTRT*LRAADGPGNAG
Trigger: TCCTGCGTTGCCAGGACCGTCCGCCGCTCTGAGTCATGTGCGAGTGGGAAGTCGCACTGACACTGAGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000622330.4
CDS CCA 72 bp AACGAGGAGAAAGCCTGTCTGTCCAAGGCGTGCCCATaGCCTCCGGGCTCCACTCGCTCCACTCGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: NEEKACLSKACP*PPGSTRSTRLA
Trigger: GGCAAGGCGAGTGGAGCGAGTGGAGCCCGGAGGCCATGGGCACGCCTTGGACAGACAGGCTTTCTCCTCGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622330.4
CDS CAA 72 bp AGAGCGGCGGACGGTCCTGGCAACGCAGGAAAACATTaGAGGAACTCGCGCTGGAGCGTCTCTGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: RAADGPGNAGKH*RNSRWSVSGPS
Trigger: GGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCAGGACCGTCCGCCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS GCA 72 bp CCGGGACCAGCTGCCCCAAAGAGTACGGCGGATGCATaGTTGTCTTGCCTTCCTTCAGAGCCCGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PGPAAPKSTADA*LSCLPSEPAAS
Trigger: GGAAGCTGCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000502679.1
ENST00000507256.1
CDS GCA 72 bp CTCTCCGGGACCAGCTGCCCCAAAGAGTACGGCGGATaGATGCTTGTCTTGCCTTCCTTCAGAGCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: LSGTSCPKEYGG*MLVLPSFRARS
Trigger: GCTGCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTTGGGGCAGCTGGTCCCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000502679.1
ENST00000507256.1
CDS CCA 72 bp CCTGGCAACGCAGGAAAACATTTGAGGAACTCGCGCTaGAGCGTCTCTGGGCCGTCCCAGGGTGCGGTTACG +
Preference number: 6 (lower is better)
Translates to: PGNAGKHLRNSR*SVSGPSQGAVT
Trigger: CGTAACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS GCA 72 bp CTGGAGGACTCCTGGATTCTCCAGCTGGGTCCCAAATaGCACCCGGGATGGTCTGTGGAGAGAAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: LEDSWILQLGPK*HPGWSVERSLS
Trigger: GGACAGGCTTCTCTCCACAGACCATCCCGGGTGGCATTTGGGACCCAGCTGGAGAATCCAGGAGTCCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476006.5
CDS CCA 72 bp AGGAAAACATTTGAGGAACTCGCGCTGGAGCGTCTCTaGGCCGTCCCAGGGTGCGGTTACGAAAGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: RKTFEELALERL*AVPGCGYESRS
Trigger: GCTCCGGCTTTCGTAACCGCACCCTGGGACGGCCCAGAGACGCTCCAGCGCGAGTTCCTCAAATGTTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 72 bp TGGATTCTCCAGCTGGGTCCCAAATGCCACCCGGGATaGTCTGTGGAGAGAAGCCTGTCCAAGGCGTGCCCA +
Preference number: 6 (lower is better)
Translates to: WILQLGPKCHPG*SVERSLSKACP
Trigger: TGGGCACGCCTTGGACAGGCTTCTCTCCACAGACCATCCCGGGTGGCATTTGGGACCCAGCTGGAGAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476006.5
CDS CAA 72 bp GGACCAGCTGCCCCAAAGAGTACGGCGGATGCATGCTaGTCTTGCCTTCCTTCAGAGCCCGCAGCTTCCACG +
Preference number: 6 (lower is better)
Translates to: GPAAPKSTADAC*SCLPSEPAAST
Trigger: CGTGGAAGCTGCGGGCTCTGAAGGAAGGCAAGACAAGCATGCATCCGCCGTACTCTTTGGGGCAGCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344086.8
ENST00000368485.8
ENST00000502679.1
ENST00000507256.1
CDS CAA 72 bp GTCTTCGGCCGGACTGTTCTGACAAGAGCACAGCCTTaGTCGTCAGGGATGGGGTGCTCCGAGGACCCCACT +
Preference number: 6 (lower is better)
Translates to: VFGRTVLTRAQP*SSGMGCSEDPT
Trigger: AGTGGGGTCCTCGGAGCACCCCATCCCTGACGACAAAGGCTGTGCTCTTGTCAGAACAGTCCGGCCGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512471.1
CDS CCA 72 bp TCCCACTCGCACATGACTCAGAGCGGCGGACGGTCCTaGCAACGCAGGAAAACATTTGAGGAACTCGCGCTG +
Preference number: 6 (lower is better)
Translates to: SHSHMTQSGGRS*QRRKTFEELAL
Trigger: CAGCGCGAGTTCCTCAAATGTTTTCCTGCGTTGCCAGGACCGTCCGCCGCTCTGAGTCATGTGCGAGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344086.8
ENST00000622330.4
CDS CCA 72 bp AAGTGCCTGCATGGGGGTGGACACCTCGTTCTCAGCTaGAGGACTCCTGGATTCTCCAGCTGGGTCCCAAAT +
Preference number: 6 (lower is better)
Translates to: KCLHGGGHLVLS*RTPGFSSWVPN
Trigger: ATTTGGGACCCAGCTGGAGAATCCAGGAGTCCTCCAGCTGAGAACGAGGTGTCCACCCCCATGCAGGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476006.5
CDS TCA 72 bp CACTTGGCAAGAGAGACACCTCAAGCTCAGGGTTTCTaGGCGCCTGTGGCTAGCCACAGACTCCTACTCACT +
Preference number: 6 (lower is better)
Translates to: HLARETPQAQGF*APVASHRLLLT
Trigger: AGTGAGTAGGAGTCTGTGGCTAGCCACAGGCGCTCAGAAACCCTGAGCTTGAGGTGTCTCTCTTGCCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502679.1
CDS CCA 72 bp GAGAGACACCTCAAGCTCAGGGTTTCTGAGCGCCTGTaGCTAGCCACAGACTCCTACTCACTTTCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: ERHLKLRVSERL*LATDSYSLSEW
Trigger: CCACTCTGAAAGTGAGTAGGAGTCTGTGGCTAGCCACAGGCGCTCAGAAACCCTGAGCTTGAGGTGTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502679.1
CDS TCA 72 bp GCTCCCTCCAGCAACCAGGAATGTGGGCAGTGGTACTaGAGAAGAATCTTGCACTGGGAGGCTTGTCGCATT +
Preference number: 6 (lower is better)
Translates to: APSSNQECGQWY*RRILHWEACRI
Trigger: AATGCGACAAGCCTCCCAGTGCAAGATTCTTCTTCAGTACCACTGCCCACATTCCTGGTTGCTGGAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368485.8
ENST00000507256.1
ENST00000515190.1
CDS CCA 72 bp AAGTGCCTGCATGGGGGTGGACACCTCGTTCTCAGCTaGAGGACTCCTGGATTCATCCATGTTGTGAATGTC +
Preference number: 6 (lower is better)
Translates to: KCLHGGGHLVLS*RTPGFIHVVNV
Trigger: GACATTCACAACATGGATGAATCCAGGAGTCCTCCAGCTGAGAACGAGGTGTCCACCCCCATGCAGGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507256.1