RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000136244

Ensembl transcript IDs: ENST00000258743.10, ENST00000401630.7, ENST00000401651.5, ENST00000404625.5, ENST00000406575.1, ENST00000407492.5, ENST00000426291.5, ENST00000464710.1, ENST00000485300.1

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTaGCCAGAAGAAGGAATGCCCATTAACAACAACAATCTGAGGTGC +
Preference number: 1 (lower is better)
Translates to: LHREQHKFCAQWTGF*PEEGMPINNNNLRC
Trigger: GCACCTCAGATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
3UTR-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGACCAGAAGAAGGAATaGCCATTAACAACAACAATC +
Preference number: 2 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFDQKKE*PLTTTI
Trigger: GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
3UTR-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGACCAGAAGAAGGAATaGCCATTAACAACAACAATC +
Preference number: 2 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLDQKKE*PLTTTI
Trigger: GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCACTGGTTCTGTGCCTaGAGCTTCGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIHWFCA*SFVSRL
Trigger: CAGCCTGCTGACGAAGCTGCAGGCACAGAACCAGTG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCAGCCACTGGTTCTGTaGCTGCAGCTTCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIQPLVL*LQLRQQ
Trigger: CTGCTGACGAAGCTGCAGGCACAGAACCAGTGGCTG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGCCCTCAGGCTGGACTaGAGGAACTCCTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIALRLD*RNSLKL
Trigger: CAGCTTTAAGGAGTTCCTGCAGTCCAGCCTGAGGGC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTGCCCATGCTACATTTaGCGAAGAGCCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTICPCYI*RRALRL
Trigger: CAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGCTTCGTCAGCAGGCTaGCATTTGTGGTTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIASSAG*HLWLGQ
Trigger: CTGACCCAACCACAAATGCCAGCCTGCTGACGAAGC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTGCGCAGAATGAGATaGGTTGTCATGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILRRMR*VVMSCS
Trigger: GCTGCAGGACATGACAACTCATCTCATTCTGCGCAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTTCTCAGGGCTGAGATaGCGTCGAGGATGTACCGAA +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIFSGLR*RRGCTE
Trigger: TTCGGTACATCCTCGACGGCATCTCAGCCCTGAGAA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCACTGGTTCTGTGCCTaGAGCTTCGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFHWFCA*SFVSRL
Trigger: CAGCCTGCTGACGAAGCTGCAGGCACAGAACCAGTG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCAGCCACTGGTTCTGTaGCTGCAGCTTCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFQPLVL*LQLRQQ
Trigger: CTGCTGACGAAGCTGCAGGCACAGAACCAGTGGCTG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGAAGGAGTTCATAGCTaGGCTCCTGGAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIEGVHS*APGGEI
Trigger: TATCTCCCCTCCAGGAGCCCAGCTATGAACTCCTTC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCAGGGAGAAGGCAACTaGACCGAAGGCGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFQGEGN*TEGACG
Trigger: TCCACAAGCGCCTTCGGTCCAGTTGCCTTCTCCCTG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258743.10
ENST00000404625.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGGGCGGCTACATCTTTaGAATCTTCTCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIGRLHL*NLLLGV
Trigger: TACCCCCAGGAGAAGATTCCAAAGATGTAGCCGCCC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGCTGGCATTTGTGGTTaGGTCAGGGGTGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIAGICG*VRGGYC
Trigger: GCAATAACCACCCCTGACCCAACCACAAATGCCAGC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTCGTTCTGAAGAGGTaGGTGGCTGTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFFVLKR*VAVCVG
Trigger: CCCCACACAGACAGCCACTCACCTCTTCAGAACGAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCTCCTTTCTCAGGGCTaGGATGCCGTCGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLLSQG*DAVEDV
Trigger: TACATCCTCGACGGCATCTCAGCCCTGAGAAAGGAG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGCCCTCAGGCTGGACTaGAGGAACTCCTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFALRLD*RNSLKL
Trigger: CAGCTTTAAGGAGTTCCTGCAGTCCAGCCTGAGGGC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTGCCCATGCTACATTTaGCGAAGAGCCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFCPCYI*RRALRL
Trigger: CAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCAATCTGAGGTGCCCATaGTACATTTGCCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTINLRCP*YICRRA
Trigger: GGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGAGTGGCTGTCTGTGTaGGGCGGCTACATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFEWLSV*GGYIFG
Trigger: TCCAAAGATGTAGCCGCCCCACACAGACAGCCACTC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGCAGGCTGGCATTTGTaGTTGGGTCAGGGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFAGWHL*LGQGWL
Trigger: TAACCACCCCTGACCCAACCACAAATGCCAGCCTGC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGCTTCGTCAGCAGGCTaGCATTTGTGGTTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFASSAG*HLWLGQ
Trigger: CTGACCCAACCACAAATGCCAGCCTGCTGACGAAGC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCTGCGCAGAATGAGATaGGTTGTCATGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLRRMR*VVMSCS
Trigger: GCTGCAGGACATGACAACTCATCTCATTCTGCGCAG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTCTCAGGGCTGAGATaGCGTCGAGGATGTACCGAA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFFSGLR*RRGCTE
Trigger: TTCGGTACATCCTCGACGGCATCTCAGCCCTGAGAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTGCCAGTGCCTCTTTaGTGCTTTCACACATGTTAC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILPVPL*CFHTCY
Trigger: GTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGAAGGAGTTCATAGCTaGGCTCCTGGAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFEGVHS*APGGEI
Trigger: TATCTCCCCTCCAGGAGCCCAGCTATGAACTCCTTC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTCATCTGCACAGCTCTaGCTTGTTCCTCACTACTCT +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTISSAQL*LVPHYS
Trigger: AGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGCTGGCATTTGTGGTTaGGTCAGGGGTGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFAGICG*VRGGYC
Trigger: GCAATAACCACCCCTGACCCAACCACAAATGCCAGC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTTTGTCAATTCGTTCTaGAGAGGTGAGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIFVNSF*RGEWLS
Trigger: AGACAGCCACTCACCTCTTCAGAACGAATTGACAAA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCACTTTTGTACTCATCTaGACAGCTCTGGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTITFVLI*TALACS
Trigger: GGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCAATCTGAGGTGCCCATaGTACATTTGCCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFNLRCP*YICRRA
Trigger: GGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCAACAACAATCTGAGGTaGCCATGCTACATTTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTINNNLR*PCYICR
Trigger: TCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGACCTTGTGGCATCTTaGAGAGTTTGTGTTTATCGC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIDLVAS*RVCVYR
Trigger: GCGATAAACACAAACTCTGCAAGATGCCACAAGGTC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTACTCTTTCGTTCCCGGTaGGCTCGAGGGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLLFRSR*ARGQNE
Trigger: CTCATTCTGCCCTCGAGCCCACCGGGAACGAAAGAG...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCAGACAGCTCTGAGATaGCTTCAGGCTGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFQTALR*LQAETR
Trigger: TCTGGTTTCAGCCTGAAGCCATCTCAGAGCTGTCTG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCTTATTGGGTCAAGCTaGTTCAGAAGCCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLIGSS*FRSPLP
Trigger: GGGAAGAGGGCTTCTGAACCAGCTTGACCCAATAAG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR TCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATTCGTTCTGAAGAGGTaGGTGGCTGTCTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLFVLKR*VAVCVG
Trigger: CCCCACACAGACAGCCACTCACCTCTTCAGAACGAA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258743.10
ENST00000404625.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGGCAAGTCTCCTCATTaGATCCAGATTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFGKSPH*IQIGSI
Trigger: GATGCTTCCAATCTGGATTCAATGAGGAGACTTGCC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGCCCTCAGGCTGGACTaGAGGAACTCCTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLALRLD*RNSLKL
Trigger: CAGCTTTAAGGAGTTCCTGCAGTCCAGCCTGAGGGC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATGCCCATGCTACATTTaGCGAAGAGCCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLCPCYI*RRALRL
Trigger: CAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGAGTGGCTGTCTGTGTaGGGCGGCTACATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLEWLSV*GGYIFG
Trigger: TCCAAAGATGTAGCCGCCCCACACAGACAGCCACTC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258743.10
ENST00000404625.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTCTCAAATCTGTTCTaGAGGTACTCTAGGTATACC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILSNLF*RYSRYT
Trigger: GGTATACCTAGAGTACCTCCAGAACAGATTTGAGAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTCATCTGCACAGCTCTaGCTTGTTCCTCACTACTCT +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFSSAQL*LVPHYS
Trigger: AGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTTGTCAATTCGTTCTaGAGAGGTGAGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFFVNSF*RGEWLS
Trigger: AGACAGCCACTCACCTCTTCAGAACGAATTGACAAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR TCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTTAACAACAACAATCTaGGGTGCCCATGCTACATTT +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILTTTI*GAHATF
Trigger: AAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCACACTTTCCAAGAAATaGTCTGGCTCTGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTITLSKK*SGSETK
Trigger: CTTTGTTTCAGAGCCAGATCATTTCTTGGAAAGTGT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCCAGTGCCTCTTTGCTaGTTTCACACATGTTACTCT +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFPVPLC*FHTCYS
Trigger: AGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCACTTTTGTACTCATCTaGACAGCTCTGGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFTFVLI*TALACS
Trigger: GGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCAACAACAATCTGAGGTaGCCATGCTACATTTGCCGA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFNNNLR*PCYICR
Trigger: TCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGGGCGGCTACATCTTTaGAATCTTCTCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLGRLHL*NLLLGV
Trigger: TACCCCCAGGAGAAGATTCCAAAGATGTAGCCGCCC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258743.10
ENST00000404625.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTGGTTGGGTCAGGGGTaGTTATTGCATCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFWLGQG*LLHLDS
Trigger: AGAATCTAGATGCAATAACCACCCCTGACCCAACCA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTTGGAATCTTCTCCTaGGGGTATTGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFFGIFS*GYCGEG
Trigger: TCCTTCTCCACAATACCCCCAGGAGAAGATTCCAAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401630.7
CDS-3UTR TCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGAAATGATCTGGCTCTaGAACAAAGGATATTCAAAC +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIEMIWL*NKGYSN
Trigger: GTTTGAATATCCTTTGTTTCAGAGCCAGATCATTTC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAAATCTGAGGTGCCCATaGTACATTTGCCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLNLRCP*YICRRA
Trigger: GGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATT...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATCCAGTCCTCTTTGTTaGGGATGTCAAAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLSSPLC*GCQRRT
Trigger: GGTCCTCCTTTGACATCCCCAACAAAGAGGACTGGA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR TCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGGCAAGTCTCCTCATTaGATCCAGATTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLGKSPH*IQIGSI
Trigger: GATGCTTCCAATCTGGATTCAATGAGGAGACTTGCC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTAACAACAACAATCTaGGGTGCCCATGCTACATTT +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLTTTI*GAHATF
Trigger: AAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCACACTTTCCAAGAAATaGTCTGGCTCTGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFTLSKK*SGSETK
Trigger: CTTTGTTTCAGAGCCAGATCATTTCTTGGAAAGTGT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTCATTGAATCCAGATTaGAAGCATCCATCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PSGQVSDQKKECPLTTTISLNPD*KHPSFS
Trigger: TGAAAAAGATGGATGCTTCCAATCTGGATTCAATGA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTCTCCCTGTAAGTCTTaGTTTGAAATCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFSPCKS*FEIKRS
Trigger: GCTTCTTTTGATTTCAAATCAAGACTTACAGGGAGA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTACCAGTGCCTCTTTGCTaGTTTCACACATGTTACTCT +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLPVPLC*FHTCYS
Trigger: AGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGG...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAACTTTTGTACTCATCTaGACAGCTCTGGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLTFVLI*TALACS
Trigger: GGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGT...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR GCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAAACAACAATCTGAGGTaGCCATGCTACATTTGCCGA +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLNNNLR*PCYICR
Trigger: TCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTT...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATGGTTGGGTCAGGGGTaGTTATTGCATCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLWLGQG*LLHLDS
Trigger: AGAATCTAGATGCAATAACCACCCCTGACCCAACCA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTCATTGAATCCAGATTaGAAGCATCCATCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFSLNPD*KHPSFS
Trigger: TGAAAAAGATGGATGCTTCCAATCTGGATTCAATGA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTACTCTCAAATCTGTTCTaGAGGTACTCTAGGTATACC +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLLSNLF*RYSRYT
Trigger: GGTATACCTAGAGTACCTCCAGAACAGATTTGAGAG...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR TCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATTAACAACAACAATCTaGGGTGCCCATGCTACATTT +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLLTTTI*GAHATF
Trigger: AAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTACCAAGAATTTCTTATTaGGTCAAGCTGGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLPRISY*VKLVQK
Trigger: CTTCTGAACCAGCTTGACCCAATAAGAAATTCTTGG...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR TCA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGAAATGATCTGGCTCTaGAACAAAGGATATTCAAAC +
Preference number: 4 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLEMIWL*NKGYSN
Trigger: GTTTGAATATCCTTTGTTTCAGAGCCAGATCATTTC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS GCA 90 bp GCGCAGAATGAGATGAGTTGTCATGTCCTGCAGCCACTGGTTCTGTaGCTGCAGCTTCGTCAGCAGGCTGGCATTTGTGGTTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: AQNEMSCHVLQPLVL*LQLRQQAGICGWVR
Trigger: CCTGACCCAACCACAAATGCCAGCCTGCTGACGAAGCTGCAGGCACAGAACCAGTGGCTGCAGGACATGACAACTCATCTCATTCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS TCA 90 bp CTCAGGCTGGACTGCAGGAACTCCTTAAAGCTGCGCAGAATGAGATaGGTTGTCATGTCCTGCAGCCACTGGTTCTGTGCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRLDCRNSLKLRRMR*VVMSCSHWFCACSF
Trigger: GAAGCTGCAGGCACAGAACCAGTGGCTGCAGGACATGACAACTCATCTCATTCTGCGCAGCTTTAAGGAGTTCCTGCAGTCCAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS TCA 90 bp GGAGATAGAGCTTCTCTTTCGTTCCCGGTGGGCTCGAGGGCAGAATaGGCCTCAGACATCTCCAGTCCTCTTTGTTGGGGATGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: GDRASLSFPVGSRAE*ASDISSPLCWGCQR
Trigger: CCTTTGACATCCCCAACAAAGAGGACTGGAGATGTCTGAGGCTCATTCTGCCCTCGAGCCCACCGGGAACGAAAGAGAAGCTCTATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CCA 90 bp TGTCCTGCAGCCACTGGTTCTGTGCCTGCAGCTTCGTCAGCAGGCTaGCATTTGTGGTTGGGTCAGGGGTGGTTATTGCATCTAGATTCT +
Preference number: 5 (lower is better)
Translates to: CPAATGSVPAASSAG*HLWLGQGWLLHLDS
Trigger: AGAATCTAGATGCAATAACCACCCCTGACCCAACCACAAATGCCAGCCTGCTGACGAAGCTGCAGGCACAGAACCAGTGGCTGCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS TCA 90 bp TTTGGAAGTGGCATTGCATCCCTGAGTTGTCCAGGACACTGTCTTTaGGCCTGTCTTCCCCCACACCAAGTTGAGGGAATGAGGACACAC +
Preference number: 5 (lower is better)
Translates to: FGSGIASLSCPGHCL*ACLPPHQVEGMRTH
Trigger: GTGTGTCCTCATTCCCTCAACTTGGTGTGGGGGAAGACAGGCTCAAAGACAGTGTCCTGGACAACTCAGGGATGCAATGCCACTTCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS GCA 90 bp CCAGAAGAAGGAATGCCCATTAACAACAACAATCTGAGGTGCCCATaGTACATTTGCCGAAGAGCCCTCAGGCTGGACTGCAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: PEEGMPINNNNLRCP*YICRRALRLDCRNS
Trigger: GGAGTTCCTGCAGTCCAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAATGGGCATTCCTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 90 bp ACTAGGTTGTCCCTCCAGTCTCCAGAGACCCAGACAGCTCTGAGATaGCTTCAGGCTGAAACCAGACCCTTGCACAACACCAAAACACTT +
Preference number: 5 (lower is better)
Translates to: TRLSLQSPETQTALR*LQAETRPLHNTKTL
Trigger: AAGTGTTTTGGTGTTGTGCAAGGGTCTGGTTTCAGCCTGAAGCCATCTCAGAGCTGTCTGGGTCTCTGGAGACTGGAGGGACAACCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS TCA 90 bp GACACTGTCTTTGAGCCTGTCTTCCCCCACACCAAGTTGAGGGAATaGGGACACACCCACCTTTTTCTGCAGGAACTGGATCAGGACTTT +
Preference number: 5 (lower is better)
Translates to: DTVFEPVFPHTKLRE*GHTHLFLQELDQDF
Trigger: AAAGTCCTGATCCAGTTCCTGCAGAAAAAGGTGGGTGTGTCCTCATTCCCTCAACTTGGTGTGGGGGAAGACAGGCTCAAAGACAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS GCA 90 bp GGAATGCCCATTAACAACAACAATCTGAGGTGCCCATGCTACATTTaGCGAAGAGCCCTCAGGCTGGACTGCAGGAACTCCTTAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GMPINNNNLRCPCYI*RRALRLDCRNSLKL
Trigger: CAGCTTTAAGGAGTTCCTGCAGTCCAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAATGGGCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGTGCCCATGCTACATTaGCCGAAGAGCCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIVPMLH*PKSPQA
Trigger: AGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCAC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS TCA 90 bp CAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTaGGGTGCCCATGCTACATTTGCCGAAGAGCCCTCAGGCTGGACT +
Preference number: 5 (lower is better)
Translates to: QVSDQKKECPLTTTI*GAHATFAEEPSGWT
Trigger: AGTCCAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS TCA 90 bp CCTCCAGTCTCCAGAGACCCAGACAGCTCTGAGATGGCTTCAGGCTaGAACCAGACCCTTGCACAACACCAAAACACTTATTTACCAAAC +
Preference number: 5 (lower is better)
Translates to: PPVSRDPDSSEMASG*NQTLAQHQNTYLPN
Trigger: GTTTGGTAAATAAGTGTTTTGGTGTTGTGCAAGGGTCTGGTTTCAGCCTGAAGCCATCTCAGAGCTGTCTGGGTCTCTGGAGACTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CCA 90 bp GACATCTCCAGTCCTCTTTGTTGGGGATGTCAAAGGAGGACCTTGTaGCATCTTGCAGAGTTTGTGTTTATCGCTCCCTCTCCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: DISSPLCWGCQRRTL*HLAEFVFIAPSPCK
Trigger: CTTACAGGGAGAGGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATCCCCAACAAAGAGGACTGGAGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGGCTGGCATTTGTGGTaGGGTCAGGGGTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIGWHLW*GQGWLL
Trigger: CAATAACCACCCCTGACCCAACCACAAATGCCAGCC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTCAGCAGGCTGGCATTaGTGGTTGGGTCAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFSAGWH*WLGQGW
Trigger: CCACCCCTGACCCAACCACAAATGCCAGCCTGCTGA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGGGGCGGCTACATCTTaGGAATCTTCTCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFGAATS*ESSPGG
Trigger: ACCCCCAGGAGAAGATTCCAAAGATGTAGCCGCCCC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGTGCCCATGCTACATTaGCCGAAGAGCCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFVPMLH*PKSPQA
Trigger: AGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCAC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTTGCAGGAGGATCCTaGGTCTCATGCAAATGGGCT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILAGGS*VSCKWA
Trigger: AGCCCATTTGCATGAGACCAAGGATCCTCCTGCAAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS GCA 90 bp CCCACCTTTTTCTGCAGGAACTGGATCAGGACTTTTGTACTCATCTaGACAGCTCTGGCTTGTTCCTCACTACTCTCAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: PTFFCRNWIRTFVLI*TALACSSLLSNLFW
Trigger: CCAGAACAGATTTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGTTCCTGCAGAAAAAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTGCACAGCTCTGGCTaGTTCCTCACTACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILHSSG*FLTTLK
Trigger: TTTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGGCTGGCATTTGTGGTaGGGTCAGGGGTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFGWHLW*GQGWLL
Trigger: CAATAACCACCCCTGACCCAACCACAAATGCCAGCC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS CCA 90 bp TCTGCAGGAACTGGATCAGGACTTTTGTACTCATCTGCACAGCTCTaGCTTGTTCCTCACTACTCTCAAATCTGTTCTGGAGGTACTCTA +
Preference number: 5 (lower is better)
Translates to: SAGTGSGLLYSSAQL*LVPHYSQICSGGTL
Trigger: TAGAGTACCTCCAGAACAGATTTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGTTCCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000464710.1
ENST00000485300.1
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCACTGGATCAGGACTTTaGTACTCATCTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTITGSGL*YSSAQL
Trigger: GAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCGGTCAGGGGTGGTTATaGCATCTAGATTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIGQGWL*HLDSLP
Trigger: AGGCAAAGAATCTAGATGCAATAACCACCCCTGACC...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATCAGCAGGCTGGCATTaGTGGTTGGGTCAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLSAGWH*WLGQGW
Trigger: CCACCCCTGACCCAACCACAAATGCCAGCCTGCTGA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTGTCAAAGGAGGACCTaGTGGCATCTTGCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTICQRRT*WHLAEF
Trigger: AAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS GCA 90 bp CCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTTGCTaGTTTCACACATGTTACTCTTGTTACATGTCTCCTTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PSLEGSGCFLPVPLC*FHTCYSCYMSPFSG
Trigger: CCCTGAGAAAGGAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000485300.1
CDS GCA 90 bp TTTGCCTTTTTCTGCAGGAACTGGATCAGGACTTTTGTACTCATCTaGACAGCTCTGGCTTGTTCCTCACTACTCTCAAATCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FAFFCRNWIRTFVLI*TALACSSLLSNLFW
Trigger: CCAGAACAGATTTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGTTCCTGCAGAAAAAGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 90 bp ATCTGCACAGCTCTGGCTTGTTCCTCACTACTCTCAAATCTGTTCTaGAGGTACTCTAGGTATACCTCAAACTCCAAAAGACCAGTGATG +
Preference number: 5 (lower is better)
Translates to: ICTALACSSLLSNLF*RYSRYTSNSKRPVM
Trigger: CATCACTGGTCTTTTGGAGTTTGAGGTATACCTAGAGTACCTCCAGAACAGATTTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGGGGCGGCTACATCTTaGGAATCTTCTCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLGAATS*ESSPGG
Trigger: ACCCCCAGGAGAAGATTCCAAAGATGTAGCCGCCCC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258743.10
ENST00000404625.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCAGGCAAGTCTCCTCATaGAATCCAGATTGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIRQVSS*NPDWKH
Trigger: ATGCTTCCAATCTGGATTCAATGAGGAGACTTGCCT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCTGCACAGCTCTGGCTaGTTCCTCACTACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLHSSG*FLTTLK
Trigger: TTTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGTGCCCATGCTACATTaGCCGAAGAGCCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLVPMLH*PKSPQA
Trigger: AGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCAC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS GCA 90 bp CCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTTGCTaGTTTCACACATGTTACTCTTGTTACATGTTTGTGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSLEGSGCFLPVPLC*FHTCYSCYMFVEKE
Trigger: CTCCTTCTCCACAAACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000407492.5
CDS CCA 90 bp CTCATTGAATCCAGATTGGAAGCATCCATCTTTTTCAGCCATCTTTaGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTTGCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LIESRLEASIFFSHL*KVQVVFCQCLFAAF
Trigger: GAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGATGGATGCTTCCAATCTGGATTCAATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTA +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFSASAS*LLSHML
Trigger: TAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTTGGAAGGTTCAGGTaGTTTTCTGCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFFGRFR*FSASAS
Trigger: AGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCACTGGATCAGGACTTTaGTACTCATCTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFTGSGL*YSSAQL
Trigger: GAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGGTCAGGGGTGGTTATaGCATCTAGATTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFGQGWL*HLDSLP
Trigger: AGGCAAAGAATCTAGATGCAATAACCACCCCTGACC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGGCTGGCATTTGTGGTaGGGTCAGGGGTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLGWHLW*GQGWLL
Trigger: CAATAACCACCCCTGACCCAACCACAAATGCCAGCC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCCCAAGAATTTCTTATaGGGTCAAGCTGGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIPKNFL*GQAGSE
Trigger: TTCTGAACCAGCTTGACCCAATAAGAAATTCTTGGG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCGGACCTTGTGGCATCTaGCAGAGTTTGTGTTTATCG +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFGPCGI*QSLCLS
Trigger: CGATAAACACAAACTCTGCAAGATGCCACAAGGTCC...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS GCA 90 bp CCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTTGCTaGTTTCACACATGTTACTCTTGTTACATGTCTGGGAAAGAATAC +
Preference number: 5 (lower is better)
Translates to: PSLEGSGCFLPVPLC*FHTCYSCYMSGKEY
Trigger: GTATTCTTTCCCAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464710.1
CDS CCA 90 bp GAAACTATTTCTCAGACTCTTTTGTTTACGTGTAGCCTTCTCTTTTaGAAGTGGCATTGCATCCCTGAGTTGTCCAGGACACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: ETISQTLLFTCSLLF*KWHCIPELSRTLSL
Trigger: CAAAGACAGTGTCCTGGACAACTCAGGGATGCAATGCCACTTCCAAAAGAGAAGGCTACACGTAAACAAAAGAGTCTGAGAAATAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000406575.1
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTCACACATGTTACTCTaGTTACATGTCTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTISHMLL*LHVSFL
Trigger: GAGAAAGGAGACATGTAACAAGAGTAACATGTGTGA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTTTTTCAGCCATCTTaGGAAGGTTCAGGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILFQPS*EGSGCF
Trigger: AAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCCTCATTGAATCCAGATaGGAAGCATCCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILIESR*EASIFF
Trigger: GAAAAAGATGGATGCTTCCAATCTGGATTCAATGAG...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCAGGCAAGTCTCCTCATaGAATCCAGATTGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFRQVSS*NPDWKH
Trigger: ATGCTTCCAATCTGGATTCAATGAGGAGACTTGCCT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCTTGCATCTAGATTCTTaGCCTTTTTCTGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTILHLDS*PFSAGT
Trigger: AGTTCCTGCAGAAAAAGGCAAAGAATCTAGATGCAA...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS GCA 90 bp ATCTTTTTCAGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTaGCTCTTTGCTGCTTTCACACATGTTACTCTTGTTACATGTCTC +
Preference number: 5 (lower is better)
Translates to: IFFSHLWKVQVVFCQ*LFAAFTHVTLVTCL
Trigger: GAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000485300.1
CDS GCA 90 bp ATCTTTTTCAGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTaGCTCTTTGCTGCTTTCACACATGTTACTCTTGTTACATGTCTG +
Preference number: 5 (lower is better)
Translates to: IFFSHLWKVQVVFCQ*LFAAFTHVTLVTCL
Trigger: CAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464710.1
CDS-3UTR CAA 90 bp CCCAGTGGACAGGTTTCTGACCAGAAGAAGGAATGCCCATTAACAACAACAATCATGTACCGAATTTGTTaGTCAATTCGTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: PSGQVSDQKKECPLTTTIMYRIC*SIRSEE
Trigger: CTCTTCAGAACGAATTGACAAACAAATTCGGTACAT...GATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTCAGAAACCTGTCCACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAGGCATCTTGCAGAGTTaGTGTTTATCGCTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLGILQS*CLSLPL
Trigger: GAGAGGGAGCGATAAACACAAACTCTGCAAGATGCC...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTACATCTCCAGTCCTCTTaGTTGGGGATGTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLHLQSS*LGMSKE
Trigger: CTCCTTTGACATCCCCAACAAAGAGGACTGGAGATG...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS GCA 90 bp ATCTTTTTCAGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTaGCTCTTTGCTGCTTTCACACATGTTACTCTTGTTACATGTTTG +
Preference number: 5 (lower is better)
Translates to: IFFSHLWKVQVVFCQ*LFAAFTHVTLVTCL
Trigger: CAAACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTA +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLSASAS*LLSHML
Trigger: TAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATTTGGAAGGTTCAGGTaGTTTTCTGCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLFGRFR*FSASAS
Trigger: AGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCTTTTTCAGCCATCTTaGGAAGGTTCAGGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLFQPS*EGSGCF
Trigger: AAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCCTCATTGAATCCAGATaGGAAGCATCCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLIESR*EASIFF
Trigger: GAAAAAGATGGATGCTTCCAATCTGGATTCAATGAG...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAACTGGATCAGGACTTTaGTACTCATCTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLTGSGL*YSSAQL
Trigger: GAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGT...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCTTGCATCTAGATTCTTaGCCTTTTTCTGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFLHLDS*PFSAGT
Trigger: AGTTCCTGCAGAAAAAGGCAAAGAATCTAGATGCAA...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp CTTTTAGTTCTCCATAGAGAACAACATAAGTTCTGTGCCCAGTGGACAGGTTTCATGTACCGAATTTGTTaGTCAATTCGTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LLVLHREQHKFCAQWTGFMYRIC*SIRSEE
Trigger: CTCTTCAGAACGAATTGACAAACAAATTCGGTACAT...GAAACCTGTCCACTGGGCACAGAACTTATGTTGTTCTCTATGGAGAACTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTAAGGCAAGTCTCCTCATaGAATCCAGATTGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLRQVSS*NPDWKH
Trigger: ATGCTTCCAATCTGGATTCAATGAGGAGACTTGCCT...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTACTCATTGAATCCAGATaGGAAGCATCCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLLIESR*EASIFF
Trigger: GAAAAAGATGGATGCTTCCAATCTGGATTCAATGAG...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS-3UTR CAA 90 bp AATGATCTGGCTCTGAAACAAAGGATATTCAAACTGCATAGCCACTTTCCATTATTGCATCTAGATTCTTaGCCTTTTTCTGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: NDLALKQRIFKLHSHFPLLHLDS*PFSAGT
Trigger: AGTTCCTGCAGAAAAAGGCAAAGAATCTAGATGCAA...TAATGGAAAGTGGCTATGCAGTTTGAATATCCTTTGTTTCAGAGCCAGATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000407492.5
CDS CCA 72 bp AGGCAACACCAGGAGCAGCCCCAGGGAGAAGGCAACTaGACCGAAGGCGCCTGTGCCGGAGGGGAGCGAGCG +
Preference number: 6 (lower is better)
Translates to: RQHQEQPQGEGN*TEGACAGGERA
Trigger: CGCTCGCTCCCCTCCGGCACAGGCGCCTTCGGTCCAGTTGCCTTCTCCCTGGGGCTGCTCCTGGTGTTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485300.1
CDS CCA 72 bp AGGCAACACCAGGAGCAGCCCCAGGGAGAAGGCAACTaGACCGAAGGCGCTTGTGGAGAAGGAGTTCATAGC +
Preference number: 6 (lower is better)
Translates to: RQHQEQPQGEGN*TEGACGEGVHS
Trigger: GCTATGAACTCCTTCTCCACAAGCGCCTTCGGTCCAGTTGCCTTCTCCCTGGGGCTGCTCCTGGTGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
CDS CCA 72 bp CCTGGAGGGGAGATAGAGCTTCTCTTTCGTTCCCGGTaGGCTCGAGGGCAGAATGAGCCTCAGACATCTCCA +
Preference number: 6 (lower is better)
Translates to: PGGEIELLFRSR*ARGQNEPQTSP
Trigger: TGGAGATGTCTGAGGCTCATTCTGCCCTCGAGCCCACCGGGAACGAAAGAGAAGCTCTATCTCCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000404625.5
ENST00000426291.5
CDS TCA 72 bp GCTTCTCTTTCGTTCCCGGTGGGCTCGAGGGCAGAATaGGCCTCAGACATCTCCAGTCCTCTTTGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: ASLSFPVGSRAE*ASDISSPLCWG
Trigger: TCCCCAACAAAGAGGACTGGAGATGTCTGAGGCTCATTCTGCCCTCGAGCCCACCGGGAACGAAAGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CCA 72 bp GCCACTGGTTCTGTGCCTGCAGCTTCGTCAGCAGGCTaGCATTTGTGGTTGGGTCAGGGGTGGTTATTGCAT +
Preference number: 6 (lower is better)
Translates to: ATGSVPAASSAG*HLWLGQGWLLH
Trigger: ATGCAATAACCACCCCTGACCCAACCACAAATGCCAGCCTGCTGACGAAGCTGCAGGCACAGAACCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 72 bp TCCCTCCAGTCTCCAGAGACCCAGACAGCTCTGAGATaGCTTCAGGCTGAAACCAGACCCTTGCACAACACC +
Preference number: 6 (lower is better)
Translates to: SLQSPETQTALR*LQAETRPLHNT
Trigger: GGTGTTGTGCAAGGGTCTGGTTTCAGCCTGAAGCCATCTCAGAGCTGTCTGGGTCTCTGGAGACTGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS GCA 72 bp GAGATGAGTTGTCATGTCCTGCAGCCACTGGTTCTGTaGCTGCAGCTTCGTCAGCAGGCTGGCATTTGTGGT +
Preference number: 6 (lower is better)
Translates to: EMSCHVLQPLVL*LQLRQQAGICG
Trigger: ACCACAAATGCCAGCCTGCTGACGAAGCTGCAGGCACAGAACCAGTGGCTGCAGGACATGACAACTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 72 bp TGGACCGAAGGCGCTTGTGGAGAAGGAGTTCATAGCTaGGCTCCTGGAGGGGAGATAGAGCTTCTCTTTCGT +
Preference number: 6 (lower is better)
Translates to: WTEGACGEGVHS*APGGEIELLFR
Trigger: ACGAAAGAGAAGCTCTATCTCCCCTCCAGGAGCCCAGCTATGAACTCCTTCTCCACAAGCGCCTTCGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258743.10
ENST00000404625.5
ENST00000426291.5
CDS CAA 72 bp GAGGTGAGTGGCTGTCTGTGTGGGGCGGCTACATCTTaGGAATCTTCTCCTGGGGGTATTGTGGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: EVSGCLCGAATS*ESSPGGIVEKE
Trigger: CTCCTTCTCCACAATACCCCCAGGAGAAGATTCCAAAGATGTAGCCGCCCCACACAGACAGCCACTCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401630.7
CDS CCA 72 bp ACTCATTGGCATCCTGGCAAGCAAATTCCAGTGGAGTaGGGGCACACTTGGGTTCAGTTCCAAGCTCACCTG +
Preference number: 6 (lower is better)
Translates to: THWHPGKQIPVE*GHTWVQFQAHL
Trigger: CAGGTGAGCTTGGAACTGAACCCAAGTGTGCCCCCACTCCACTGGAATTTGCTTGCCAGGATGCCAATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464710.1
CDS TCA 72 bp GACTGCAGGAACTCCTTAAAGCTGCGCAGAATGAGATaGGTTGTCATGTCCTGCAGCCACTGGTTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: DCRNSLKLRRMR*VVMSCSHWFCA
Trigger: GGCACAGAACCAGTGGCTGCAGGACATGACAACTCATCTCATTCTGCGCAGCTTTAAGGAGTTCCTGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS TCA 72 bp GCTTCTCTTTCGTTCCCGGTGGGCTCGAGGGCAGAATaGGCCTCAGACATCTCCAGTCCTATATTTATTGGG +
Preference number: 6 (lower is better)
Translates to: ASLSFPVGSRAE*ASDISSPIFIG
Trigger: CCCAATAAATATAGGACTGGAGATGTCTGAGGCTCATTCTGCCCTCGAGCCCACCGGGAACGAAAGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000426291.5
CDS GCA 72 bp GGAATGCCCATTAACAACAACAATCTGAGGTGCCCATaGTACATTTGCCGAAGAGCCCTCAGGCTGGACTGC +
Preference number: 6 (lower is better)
Translates to: GMPINNNNLRCP*YICRRALRLDC
Trigger: GCAGTCCAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAATGGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 72 bp AATCTGCTTCCGCGTCGGCACCCAAGAATTTCTTATTaGGTCAAGCTGGTTCAGAAGCCCTCTTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: NLLPRRHPRISY*VKLVQKPSSLR
Trigger: CCTGAGGGAAGAGGGCTTCTGAACCAGCTTGACCCAATAAGAAATTCTTGGGTGCCGACGCGGAAGCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CCA 72 bp TTCTCCTGGGGGTATTGTGGAGAAGGAGTTCATAGCTaGGCTCCTGGAGGGGAGATAGAGCTTCTCTTTCGT +
Preference number: 6 (lower is better)
Translates to: FSWGYCGEGVHS*APGGEIELLFR
Trigger: ACGAAAGAGAAGCTCTATCTCCCCTCCAGGAGCCCAGCTATGAACTCCTTCTCCACAATACCCCCAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401630.7
CDS CCA 72 bp CTACAACTCATTGGCATCCTGGCAAGCAAATTCCAGTaGAGTGGGGGCACACTTGGGTTCAGTTCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: LQLIGILASKFQ*SGGTLGFSSKL
Trigger: GAGCTTGGAACTGAACCCAAGTGTGCCCCCACTCCACTGGAATTTGCTTGCCAGGATGCCAATGAGTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464710.1
CDS CAA 72 bp AGCCTTCTCTTTTGGAAGTGGCATTGCATCCCTGAGTaGTCCAGGACACTGTCTTTGAGCCTGTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: SLLFWKWHCIPE*SRTLSLSLSSP
Trigger: GGGGGAAGACAGGCTCAAAGACAGTGTCCTGGACAACTCAGGGATGCAATGCCACTTCCAAAAGAGAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS CAA 72 bp GAATCTGCTTCCGCGTCGGCACCCAAGAATTTCTTATaGGGTCAAGCTGGTTCAGAAGCCCTCTTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: ESASASAPKNFL*GQAGSEALFPQ
Trigger: CTGAGGGAAGAGGGCTTCTGAACCAGCTTGACCCAATAAGAAATTCTTGGGTGCCGACGCGGAAGCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CAA 90 bp TCCTTTCTCAGGGCTGAGATGCCGTCGAGGATGTACCGAATTTGTTaGTCAATTCGTTCTGAAGAGGTGAGTGGCTGTCTGTGTGGGGCG +
Preference number: 6 (lower is better)
Translates to: SFLRAEMPSRMYRIC*SIRSEEVSGCLCGA
Trigger: CGCCCCACACAGACAGCCACTCACCTCTTCAGAACGAATTGACAAACAAATTCGGTACATCCTCGACGGCATCTCAGCCCTGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000485300.1
CDS CAA 90 bp CGTTCTGAAGAGGTGAGTGGCTGTCTGTGTGGGGCGGCTACATCTTaGGAATCTTCTCCTGGGGGTATTGTGGAGAAGGAGTTCATAGCT +
Preference number: 6 (lower is better)
Translates to: RSEEVSGCLCGAATS*ESSPGGIVEKEFIA
Trigger: AGCTATGAACTCCTTCTCCACAATACCCCCAGGAGAAGATTCCAAAGATGTAGCCGCCCCACACAGACAGCCACTCACCTCTTCAGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401630.7
CDS TCA 72 bp GTCGAGGATGTACCGAATTTGTTTGTCAATTCGTTCTaGAGAGGTGAGTGGCTGTCTGTGTGGGGCGGCTAC +
Preference number: 6 (lower is better)
Translates to: VEDVPNLFVNSF*RGEWLSVWGGY
Trigger: GTAGCCGCCCCACACAGACAGCCACTCACCTCTTCAGAACGAATTGACAAACAAATTCGGTACATCCTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000485300.1
CDS GCA 72 bp ATTAACAACAACAATCTGAGGTGCCCATGCTACATTTaGCGAAGAGCCCTCAGGCTGGACTGCAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: INNNNLRCPCYI*RRALRLDCRNS
Trigger: GGAGTTCCTGCAGTCCAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CAA 90 bp TTTACGTGTAGCCTTCTCTTTTGGAAGTGGCATTGCATCCCTGAGTaGTCCAGGACACTGTCTTTGAGCCTGTCTTCCCCCACACCAAGT +
Preference number: 6 (lower is better)
Translates to: FTCSLLFWKWHCIPE*SRTLSLSLSSPTPS
Trigger: ACTTGGTGTGGGGGAAGACAGGCTCAAAGACAGTGTCCTGGACAACTCAGGGATGCAATGCCACTTCCAAAAGAGAAGGCTACACGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS CAA 90 bp TCAGACATCTCCAGTCCTCTTTGTTGGGGATGTCAAAGGAGGACCTaGTGGCATCTTGCAGAGTTTGTGTTTATCGCTCCCTCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: SDISSPLCWGCQRRT*WHLAEFVFIAPSPC
Trigger: ACAGGGAGAGGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATCCCCAACAAAGAGGACTGGAGATGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS TCA 72 bp TCCAGAGACCCAGACAGCTCTGAGATGGCTTCAGGCTaGAACCAGACCCTTGCACAACACCAAAACACTTAT +
Preference number: 6 (lower is better)
Translates to: SRDPDSSEMASG*NQTLAQHQNTY
Trigger: ATAAGTGTTTTGGTGTTGTGCAAGGGTCTGGTTTCAGCCTGAAGCCATCTCAGAGCTGTCTGGGTCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS GCA 72 bp GAAGAAGGAATGCCCATTAACAACAACAATCTGAGGTaGCCATGCTACATTTGCCGAAGAGCCCTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: EEGMPINNNNLR*PCYICRRALRL
Trigger: CAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAATGGGCATTCCTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 72 bp TTTCCTGCACTTACTTGTGGAGAAGGAGTTCATAGCTaGGCTCCTGGAGGGGAGATAGAGCTTCTCTTTCGT +
Preference number: 6 (lower is better)
Translates to: FPALTCGEGVHS*APGGEIELLFR
Trigger: ACGAAAGAGAAGCTCTATCTCCCCTCCAGGAGCCCAGCTATGAACTCCTTCTCCACAAGTAAGTGCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485300.1
CDS CAA 72 bp CACCCACCTTTTTCTGCAGGAACTGGATCAGGACTTTaGTACTCATCTGCACAGCTCTGGCTTGTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: HPPFSAGTGSGL*YSSAQLWLVPH
Trigger: GTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGTTCCTGCAGAAAAAGGTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS CAA 72 bp TCCAGTCCTCTTTGTTGGGGATGTCAAAGGAGGACCTaGTGGCATCTTGCAGAGTTTGTGTTTATCGCTCCC +
Preference number: 6 (lower is better)
Translates to: SSPLCWGCQRRT*WHLAEFVFIAP
Trigger: GGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATCCCCAACAAAGAGGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CAA 90 bp CCAGTCCTCTTTGTTGGGGATGTCAAAGGAGGACCTTGTGGCATCTaGCAGAGTTTGTGTTTATCGCTCCCTCTCCCTGTAAGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: PVLFVGDVKGGPCGI*QSLCLSLPLPVSLD
Trigger: ATCAAGACTTACAGGGAGAGGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATCCCCAACAAAGAGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS TCA 72 bp GACCAGAAGAAGGAATGCCCATTAACAACAACAATCTaGGGTGCCCATGCTACATTTGCCGAAGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: DQKKECPLTTTI*GAHATFAEEPS
Trigger: TGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGATTGTTGTTGTTAATGGGCATTCCTTCTTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 72 bp TCGTCAGCAGGCTGGCATTTGTGGTTGGGTCAGGGGTaGTTATTGCATCTAGATTCTTTGCCTTTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSAGWHLWLGQG*LLHLDSLPFSA
Trigger: TGCAGAAAAAGGCAAAGAATCTAGATGCAATAACCACCCCTGACCCAACCACAAATGCCAGCCTGCTGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CCA 72 bp CTCTTGTTACATGTTTGTGGAGAAGGAGTTCATAGCTaGGCTCCTGGAGGGGAGATAGAGCTTCTCTTTCGT +
Preference number: 6 (lower is better)
Translates to: LLLHVCGEGVHS*APGGEIELLFR
Trigger: ACGAAAGAGAAGCTCTATCTCCCCTCCAGGAGCCCAGCTATGAACTCCTTCTCCACAAACATGTAACAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000407492.5
CDS CAA 72 bp TTTGTTGGGGATGTCAAAGGAGGACCTTGTGGCATCTaGCAGAGTTTGTGTTTATCGCTCCCTCTCCCTGTA +
Preference number: 6 (lower is better)
Translates to: FVGDVKGGPCGI*QSLCLSLPLPV
Trigger: TACAGGGAGAGGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATCCCCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CAA 90 bp ATGAGGACACACCCACCTTTTTCTGCAGGAACTGGATCAGGACTTTaGTACTCATCTGCACAGCTCTGGCTTGTTCCTCACTACTCTCAA +
Preference number: 6 (lower is better)
Translates to: MRTHPPFSAGTGSGL*YSSAQLWLVPHYSQ
Trigger: TTGAGAGTAGTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGTTCCTGCAGAAAAAGGTGGGTGTGTCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS GCA 72 bp TTGTTTACGTGTAGCCTTCTCTTTTGGAAGTGGCATTaGATCCCTGAGTTGTCCAGGACACTGTCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: LFTCSLLFWKWH*IPELSRTLSLS
Trigger: GCTCAAAGACAGTGTCCTGGACAACTCAGGGATGCAATGCCACTTCCAAAAGAGAAGGCTACACGTAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS CAA 72 bp TCTTTGCCTTTTTCTGCAGGAACTGGATCAGGACTTTaGTACTCATCTGCACAGCTCTGGCTTGTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SLPFSAGTGSGL*YSSAQLWLVPH
Trigger: GTGAGGAACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCCAGTTCCTGCAGAAAAAGGCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000407492.5
ENST00000485300.1
CDS CAA 72 bp GATGTCAAAGGAGGACCTTGTGGCATCTTGCAGAGTTaGTGTTTATCGCTCCCTCTCCCTGTAAGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: DVKGGPCGILQS*CLSLPLPVSLD
Trigger: ATCAAGACTTACAGGGAGAGGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CAA 90 bp TTGCAGAGTTTGTGTTTATCGCTCCCTCTCCCTGTAAGTCTTGATTaGAAATCAAAAGAAGCTAGAAGGAAACTACGGACGCAGGCACGG +
Preference number: 6 (lower is better)
Translates to: LQSLCLSLPLPVSLD*KSKEARRKLRTQAR
Trigger: CCGTGCCTGCGTCCGTAGTTTCCTTCTAGCTTCTTTTGATTTCAAATCAAGACTTACAGGGAGAGGGAGCGATAAACACAAACTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS TCA 72 bp CATGTTACTCTTGTTACATGTCTCCTTTCTCAGGGCTaGGATGCCGTCGAGGATGTACCGAATTTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: HVTLVTCLLSQG*DAVEDVPNLFV
Trigger: GACAAACAAATTCGGTACATCCTCGACGGCATCTCAGCCCTGAGAAAGGAGACATGTAACAAGAGTAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000485300.1
CDS CCA 72 bp TCTCAGACTCTTTTGTTTACGTGTAGCCTTCTCTTTTaGAAGTGGCATTGCATCCCTGAGTTGTCCAGGACA +
Preference number: 6 (lower is better)
Translates to: SQTLLFTCSLLF*KWHCIPELSRT
Trigger: TGTCCTGGACAACTCAGGGATGCAATGCCACTTCCAAAAGAGAAGGCTACACGTAAACAAAAGAGTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401651.5
ENST00000406575.1
ENST00000464710.1
CDS CAA 90 bp TCAGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTACTCTTGTTACATGTCTCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: SAIFGRFRLFSASAS*LLSHMLLLLHVSFL
Trigger: GAGAAAGGAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000485300.1
CDS CAA 90 bp TTTGTTGGGGATGTCAAAGGAGGACCTTGTGGCATCTTGCAGAGTTaGTGTTTATCGCTCCCTCTCCCTGTAAGTCTTGATTTGAAATCA +
Preference number: 6 (lower is better)
Translates to: FVGDVKGGPCGILQS*CLSLPLPVSLDLKS
Trigger: TGATTTCAAATCAAGACTTACAGGGAGAGGGAGCGATAAACACAAACTCTGCAAGATGCCACAAGGTCCTCCTTTGACATCCCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404625.5
CDS CAA 90 bp TCAGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTACTCTTGTTACATGTCTGGGAAAGA +
Preference number: 6 (lower is better)
Translates to: SAIFGRFRLFSASAS*LLSHMLLLLHVWER
Trigger: TCTTTCCCAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464710.1
CDS GCA 72 bp AGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTaGCTCTTTGCTGCTTTCACACATGTTACTCTTGTT +
Preference number: 6 (lower is better)
Translates to: SHLWKVQVVFCQ*LFAAFTHVTLV
Trigger: AACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CCA 72 bp TCCAGATTGGAAGCATCCATCTTTTTCAGCCATCTTTaGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: SRLEASIFFSHL*KVQVVFCQCLF
Trigger: AAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGATGGATGCTTCCAATCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CCA 72 bp GCTCTGGCTTGTTCCTCACTACTCTCAAATCTGTTCTaGAGGTACTCTAGGTATACCTCAAACTCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: ALACSSLLSNLF*RYSRYTSNSKR
Trigger: TCTTTTGGAGTTTGAGGTATACCTAGAGTACCTCCAGAACAGATTTGAGAGTAGTGAGGAACAAGCCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CAA 72 bp ATCCAGATTGGAAGCATCCATCTTTTTCAGCCATCTTaGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: IQIGSIHLFQPS*EGSGCFLPVPL
Trigger: AAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGAAAAAGATGGATGCTTCCAATCTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CAA 90 bp TCAGCCATCTTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTACTCTTGTTACATGTTTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SAIFGRFRLFSASAS*LLSHMLLLLHVCGE
Trigger: TTCTCCACAAACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAAGATGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000407492.5
CDS CCA 72 bp ATTTTCACCAGGCAAGTCTCCTCATTGAATCCAGATTaGAAGCATCCATCTTTTTCAGCCATCTTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: IFTRQVSSLNPD*KHPSFSAIFGR
Trigger: CCTTCCAAAGATGGCTGAAAAAGATGGATGCTTCCAATCTGGATTCAATGAGGAGACTTGCCTGGTGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CAA 72 bp TTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTACTCTTGTTACATGTC +
Preference number: 6 (lower is better)
Translates to: FGRFRLFSASAS*LLSHMLLLLHV
Trigger: GACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000404625.5
ENST00000406575.1
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CAA 72 bp GATTTTCACCAGGCAAGTCTCCTCATTGAATCCAGATaGGAAGCATCCATCTTTTTCAGCCATCTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: DFHQASLLIESR*EASIFFSHLWK
Trigger: CTTCCAAAGATGGCTGAAAAAGATGGATGCTTCCAATCTGGATTCAATGAGGAGACTTGCCTGGTGAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000258743.10
ENST00000401630.7
ENST00000401651.5
ENST00000404625.5
ENST00000406575.1
ENST00000407492.5
ENST00000426291.5
ENST00000464710.1
ENST00000485300.1
CDS CAA 72 bp TTTGGAAGGTTCAGGTTGTTTTCTGCCAGTGCCTCTTaGCTGCTTTCACACATGTTACTCTTGTTACATGTT +
Preference number: 6 (lower is better)
Translates to: FGRFRLFSASAS*LLSHMLLLLHV
Trigger: AACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGCAGAAAACAACCTGAACCTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401651.5
ENST00000407492.5
CDS CAA 72 bp GCCAGTGCCTCTTTGCTGCTTTCACACATGTTACTCTaGTTACATGTCTGGGAAAGAATACCAGAATTGTTA +
Preference number: 6 (lower is better)
Translates to: ASASLLLSHMLL*LHVWERIPELL
Trigger: TAACAATTCTGGTATTCTTTCCCAGACATGTAACAAGAGTAACATGTGTGAAAGCAGCAAAGAGGCACTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464710.1