RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL5RA (Homo sapiens)

Ensembl gene IDs: ENSG00000091181

Ensembl transcript IDs: ENST00000256452.7, ENST00000311981.12, ENST00000383846.5, ENST00000418488.6, ENST00000427088.1, ENST00000430514.6, ENST00000438560.5, ENST00000445701.5, ENST00000446632.7, ENST00000456302.5, ENST00000466722.1

Found 817 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTTGCCCACCTCTGCCCAGGGCACACCTGTGCTTGGTTCCACCTaGAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGAC +
Preference number: 1 (lower is better)
Translates to: LLPTSAQGTPVLGST*SPPPTTKASNLDAD
Trigger: GTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAACCAAGCACAGGTGTGCCCTGGGCAGAGGTGGGCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 90 bp AGCCCAGGTGATCTATGGCTGCTGAGTGGAGGGAGGAGTCTGAAGTaGGCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGG +
Preference number: 1 (lower is better)
Translates to: SPGDLWLLSGGRSLK*APHQALKSWPHLWR
Trigger: CCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGCCCACTTCAGACTCCTCCCTCCACTCAGCAGCCATAGATCACCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 90 bp AGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGCTTCTGTTCCTaGCTCCTAAGCAGAGGCAGTTTCCACAATGCCAACTGTCTGGGT +
Preference number: 1 (lower is better)
Translates to: RAGHICGGGAPCFCS*LLSRGSFHNANCLG
Trigger: ACCCAGACAGTTGGCATTGTGGAAACTGCCTCTGCTTAGGAGGCAGGAACAGAAGCAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp TCTTCCCCAGCCTGCATGAATAGCTTGAGGTCTGAGGCATTTCAATaGGGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCT +
Preference number: 1 (lower is better)
Translates to: SSPACMNSLRSEAFQ*GSGGRAVGKCDLHP
Trigger: AGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCCTCATTGAAATGCCTCAGACCTCAAGCTATTCATGCAGGCTGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 90 bp CCTCCTAAGCAGAGGCAGTTTCCACAATGCCAACTGTCTGGGTTGTaGTTTGAAAGAGATCAGACAGGGTGCTCCAAGCCGCCCCAAAAG +
Preference number: 1 (lower is better)
Translates to: PPKQRQFPQCQLSGL*FERDQTGCSKPPQK
Trigger: CTTTTGGGGCGGCTTGGAGCACCCTGTCTGATCTCTTTCAAACCACAACCCAGACAGTTGGCATTGTGGAAACTGCCTCTGCTTAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp TTCCCAATCCACCAAGGAGGCCAATGGGCTACTTTGTGTTGCTCCTaGAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGA +
Preference number: 1 (lower is better)
Translates to: FPIHQGGQWATLCCS*NTYTKGQITVPAQG
Trigger: TCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACACAAAGTAGCCCATTGGCCTCCTTGGTGGATTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp CATGTTTGTTCTGATCCCGTGGCTGTGGAGGCTCTAGGAGAAAAGTaGCTCTCTACACTCGTCCTAGTGAGAGATGGCAAGAGATGGGAG +
Preference number: 1 (lower is better)
Translates to: HVCSDPVAVEALGEK*LSTLVLVRDGKRWE
Trigger: CTCCCATCTCTTGCCATCTCTCACTAGGACGAGTGTAGAGAGTCACTTTTCTCCTAGAGCCTCCACAGCCACGGGATCAGAACAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 90 bp GACACTGCAGATAAAAAGACGTATTTCACACAAGCTCCATCCTCCTaGAAGCCGCAGTCTAGAGGGGAGGCCTCCCAGCTGTTAATGGTA +
Preference number: 1 (lower is better)
Translates to: DTADKKTYFTQAPSS*KPQSRGEASQLLMV
Trigger: TACCATTAACAGCTGGGAGGCCTCCCCTCTAGACTGCGGCTTCCAGGAGGATGGAGCTTGTGTGAAATACGTCTTTTTATCTGCAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp CCTCTTAGCCAAGAGCCAGCATCCCTGTTCTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATCAGAGGATGCCAAAGTGACAGTCAA +
Preference number: 1 (lower is better)
Translates to: PLSQEPASLFFSLRH*GMCEFIRGCQSDSQ
Trigger: TTGACTGTCACTTTGGCATCCTCTGATGAACTCACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGGATGCTGGCTCTTGGCTAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438560.5
3UTR GCA 90 bp CTCCAGGCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: LQADAKCFLPQMVAE*YNWQLKQPNGHSQK
Trigger: CTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR GCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTaGACAGGGCAAGAAGGGAGGAAGGAGTTCCCAATCCACCAAGGA +
Preference number: 1 (lower is better)
Translates to: EEVMMVTGSQRMTMS*TGQEGRKEFPIHQG
Trigger: TCCTTGGTGGATTGGGAACTCCTTCCTCCCTTCTTGCCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 90 bp AAGCTGTCTGTTGTGAATGAAAAGTCTGAGGTGAGTCAAGCAAATTaGAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGG +
Preference number: 1 (lower is better)
Translates to: KLSVVNEKSEVSQAN*KDWQVRRCYPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGACTTTTCATTCACAACAGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR CCA 90 bp AACATCCAGGTTGCAGTAGCCCAGTTGTTAGGCACATGTGTCTCCTaGTTGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: NIQVAVAQLLGTCVS*LLLTNRILIRYPAS
Trigger: GGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCCTAACAACTGGGCTACTGCAACCTGGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 90 bp TTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATaGAGACTCATATATGAAGATGTTAGGAAGAAGAATTTCTGTGTA +
Preference number: 1 (lower is better)
Translates to: FHLQSTTHHKGLQSG*RLIYEDVRKKNFCV
Trigger: TACACAGAAATTCTTCTTCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp ACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACTCACAGTaGGCCACTTCTGAAATGCCTCTTACACAGCAATTTATACATAAC +
Preference number: 1 (lower is better)
Translates to: TCYDKAGENSIDHSQ*ATSEMPLTQQFIHN
Trigger: GTTATGTATAAATTGCTGTGTAAGAGGCATTTCAGAAGTGGCTCACTGTGAGTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 90 bp TTCTGGGGTCACTTTTACCTGAGCCTGGTATTCAACTCCTCACTATaGCATTTCCTATCAACTTCTCTGAACCTTAGTAACTGCAACTAT +
Preference number: 1 (lower is better)
Translates to: FWGHFYLSLVFNSSL*HFLSTSLNLSNCNY
Trigger: ATAGTTGCAGTTACTAAGGTTCAGAGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGAATACCAGGCTCAGGTAAAAGTGACCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp ACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTAAGTaGATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAAC +
Preference number: 1 (lower is better)
Translates to: TLPYINLLLMVFTVK*ISNSLTCYDKAGEN
Trigger: GTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAATTCACTTAACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 90 bp GCCTGGTATTCAACTCCTCACTATGCCATTTCCTATCAACTTCTCTaGACCTTAGTAACTGCAACTATAAAATGGGACAGTAATACAGAT +
Preference number: 1 (lower is better)
Translates to: AWYSTPHYAISYQLL*TLVTATIKWDSNTD
Trigger: ATCTGTATTACTGTCCCATTTTATAGTTGCAGTTACTAAGGTTCAGAGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGAATACCAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCGTGCTTGGTTCCACCTaGAGTCCACCACCCACCACA +
Preference number: 2 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLVLGST*SPPPTT
Trigger: TGTGGTGGGTGGTGGACTGCAGGTGGAACCAAGCAC...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTGCAAAGATTGGCAGGTaGGGAGGTGCTACCCTGTAC +
Preference number: 2 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPAKIGR*GGATLY
Trigger: GTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGC...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAAGGCAGTTTCCACAATaGCAACTGTCTGGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPRQFPQ*QLSGLW
Trigger: CCACAACCCAGACAGTTGGCATTGTGGAAACTGCCT...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGAAAGAGTGTGCCAGGTaGGGATTCTGGGCACTGTTA +
Preference number: 2 (lower is better)
Translates to: APHQALKSWPHLWRGSSLKECAR*GFWALL
Trigger: TAACAGTGCCCAGAATCCCCACCTGGCACACTCTTT...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCAGCCCAGGTGATCTATaGCTGCTGAGTGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: TYTKGQITVPAQGSVARSSPGDL*LLSGGR
Trigger: CCTCCCTCCACTCAGCAGCCATAGATCACCTGGGCT...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 90 bp CTGCCTCCTAAGCAGAGGCAGTTTCCACAATGCCAACTGTCTGGGTaGTGGTTTGAAAGAGATCAGACAGGGTGCTCCAAGCCGCCCCAA +
Preference number: 2 (lower is better)
Translates to: LPPKQRQFPQCQLSG*WFERDQTGCSKPPQ
Trigger: TTGGGGCGGCTTGGAGCACCCTGTCTGATCTCTTTCAAACCACAACCCAGACAGTTGGCATTGTGGAAACTGCCTCTGCTTAGGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAATCCACAGAGCCCAGGTaGTCTATGGCTGCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQSTEPR*SMAAEW
Trigger: CCACTCAGCAGCCATAGATCACCTGGGCTCTGTGGA...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 2 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCACCGATGGATCAAAACTaGCTAAAACACCTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPPMDQN*LKHLQK
Trigger: TTTCTGGAGGTGTTTTAGTCAGTTTTGATCCATCGG...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 90 bp CTAAGCAGAGGCAGTTTCCACAATGCCAACTGTCTGGGTTGTGGTTaGAAAGAGATCAGACAGGGTGCTCCAAGCCGCCCCAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: LSRGSFHNANCLGCG*KEIRQGAPSRPKRT
Trigger: TGTCCTTTTGGGGCGGCTTGGAGCACCCTGTCTGATCTCTTTCAAACCACAACCCAGACAGTTGGCATTGTGGAAACTGCCTCTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAGGTCCCTTTCATGATTaGATTATGCTCAATGACTTC +
Preference number: 2 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPGPFHD*IMLNDF
Trigger: GAAGTCATTGAGCATAATTCAATCATGAAAGGGACC...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCGGGAGGAGTCTGAAGTaGGCACCACACCAAGCACTG +
Preference number: 2 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFGRSLK*APHQAL
Trigger: CAGTGCTTGGTGTGGTGCCCACTTCAGACTCCTCCC...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGCAGCTCAGGGAAGTGTaGCAAGGAGCTCCACAGAGC +
Preference number: 2 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGQLREV*QGAPQS
Trigger: GCTCTGTGGAGCTCCTTGCCACACTTCCCTGAGCTG...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 90 bp GAAGGAGTTCCCAATCCACCAAGGAGGCCAATGGGCTACTTTGTGTaGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGC +
Preference number: 2 (lower is better)
Translates to: EGVPNPPRRPMGYFV*LLKHIYQGPDNGTS
Trigger: GCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACACAAAGTAGCCCATTGGCCTCCTTGGTGGATTGGGAACTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 2 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTAGGCCTTCAGCTTCTTaGCCAAGGGCCATGTGGAAT +
Preference number: 2 (lower is better)
Translates to: LQKAFKECARWGFWALLPRPSAS*PRAMWN
Trigger: ATTCCACATGGCCCTTGGTCAAGAAGCTGAAGGCCT...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACTGGCAGGTGAGGAGGTaGTACCCTGTACGGCATGGG +
Preference number: 2 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYWQVRR*YPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCA...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCAGAGATCAGACAGGGTaGTCCAAGCCGCCCCAAAAG +
Preference number: 2 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFRDQTG*SKPPQK
Trigger: CTTTTGGGGCGGCTTGGAGCACCCTGTCTGATCTCT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAATTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 2 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGTGGCAGGTGAGGAGGTaGTACCCTGTACGGCATGGG +
Preference number: 2 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMWQVRR*YPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCA...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGATTACTATAAGACAGTaGAGGCTTGTCAAGATTCAA +
Preference number: 2 (lower is better)
Translates to: APHQALKSWPHLWRGSSLITIRQ*RLVKIQ
Trigger: TTGAATCTTGACAAGCCTGCACTGTCTTATAGTAAT...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 90 bp ATCCAGGTTGCAGTAGCCCAGTTGTTAGGCACATGTGTCTCCTGGTaGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: IQVAVAQLLGTCVSW*LLTNRILIRYPASS
Trigger: GGAGGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCCTAACAACTGGGCTACTGCAACCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACATCCTCAGATGGTAGCTaGGTGCTACAATTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: KHFANYCSTSMGVAFSATSSDGS*VLQLAA
Trigger: AGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGA...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: TYTKGQITVPAQGSVARSQMVAE*YNWQLK
Trigger: TTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTG...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCCAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 2 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTAGAAGTAAATACAGCTaGACGTTAGCCTTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPRSKYS*TLALKA
Trigger: AGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCT...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGTCAAATGATGTATCCTaGATCAGGCCTCTGGAGCTT +
Preference number: 2 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGSNDVS*IRPLEL
Trigger: AAGCTCCAGAGGCCTGATCCAGGATACATCATTTGA...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 2 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 2 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACAGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: KHFANYCSTSMGVAFSATGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACTCCTCAGATGGTAGCTaGGTGCTACAATTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNSSDGS*VLQLAA
Trigger: AGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGA...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGTGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 2 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGTGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 2 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTTTCATGATTGAATTATaGTCAATGACTTCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPFMIEL*SMTSSA
Trigger: TGCTGAGGAAGTCATTGAGCATAATTCAATCATGAA...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTATTACTATAAGACAGTaGAGGCTTGTCAAGATTCAA +
Preference number: 2 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPITIRQ*RLVKIQ
Trigger: TTGAATCTTGACAAGCCTGCACTGTCTTATAGTAAT...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 2 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 2 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCGGGGTGAGGAATTTGTaGCTCTCACTTGCTATAGAA +
Preference number: 2 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLGVRNL*LSLAIE
Trigger: TTCTATAGCAAGTGAGAGCCACAAATTCCTCACCCC...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTTCGTCTCTTTTGATATaGGGTGATATATTAGCTCTA +
Preference number: 2 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTSSLLI*GDILAL
Trigger: TAGAGCTAATATATCACCCCATATCAAAAGAGACGA...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCAAAGATTGGCAGGTaGGGAGGTGCTACCCTGTAC +
Preference number: 2 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNAKIGR*GGATLY
Trigger: GTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGC...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGATGAAAAGTCTGAGGTaGGTCAAGCAAATTGCAAAG +
Preference number: 2 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGMKSLR*VKQIAK
Trigger: CTTTGCAATTTGCTTGACTCACCTCAGACTTTTCAT...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACTGGTTCACTCCAGGCTaGTGCAAAATGCTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNWFTPG*CKMLSS
Trigger: GGAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCA...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAGGTCCCTTTCATGATTaGATTATGCTCAATGACTTC +
Preference number: 2 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQGPFHD*IMLNDF
Trigger: GAAGTCATTGAGCATAATTCAATCATGAAAGGGACC...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTAGGTGAGGCGATTTaGATGAAGCATCCATACTTT +
Preference number: 2 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPVGEAI*MKHPYF
Trigger: AAAGTATGGATGCTTCATCCAAATCGCCTCACCTAC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 2 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGAGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: PTTKASNLDADSYMKMLGANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACCAAGCACTGAAGAGCTaGCCACATTTGTGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHQALKS*PHLWRG
Trigger: CCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTG...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 90 bp TTTAGACACTTTGGCAGCAAAAACATCCAGGTTGCAGTAGCCCAGTaGTTAGGCACATGTGTCTCCTGGTTGCTTCTAACTAACCGCATT +
Preference number: 2 (lower is better)
Translates to: FRHFGSKNIQVAVAQ*LGTCVSWLLLTNRI
Trigger: AATGCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCCTAACAACTGGGCTACTGCAACCTGGATGTTTTTGCTGCCAAAGTGTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTCCCTGTTCTTTTCACTaGGGCACTGAGGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: DLDEASILLRDTRLVCLGPCSFH*GTEACV
Trigger: CACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGG...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGGTATATTGGGATATTTaGTGGAATGGCCTTGTAGAA +
Preference number: 2 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGVYWDI*WNGLVE
Trigger: TTCTACAAGGCCATTCCATCAAATATCCCAATATAC...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCTGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 2 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGAAAAACATGGCAAAATaGTTGGATGAGTCAACTTCC +
Preference number: 2 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTKNMAK*LDESTS
Trigger: GGAAGTTGACTCATCCAAGCATTTTGCCATGTTTTT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGCAGGCTGATGCAAAATaGTTTCTTCCTCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGQADAK*FLPQMV
Trigger: TACCATCTGAGGAAGAAAGCATTTTGCATCAGCCTG...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp GAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCAATTACCGTAATCTGCTATCCCTaGTGTTGTTTTTATTTCAGA +
Preference number: 2 (lower is better)
Translates to: EPHPCHLLAMQNRVKPITVICYP*CCFYFR
Trigger: TCTGAAATAAAAACAACAGCAGGGATAGCAGATTAC...GGTAATTGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383846.5
3UTR-3UTR GCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCGAGTTCATCAGAGGATaGCAAAGTGACAGTCAAAAC +
Preference number: 2 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSEFIRG*QSDSQN
Trigger: GTTTTGACTGTCACTTTGGCATCCTCTGATGAACTC...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438560.5
3UTR-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAACAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 2 (lower is better)
Translates to: TARSKYSWTLALKAVCCEQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 2 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: EMARDGSQYHDFTLHQPAVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTGTCTGGGTTGTGGTTTaGAAGAGATCAGACAGGGTG +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVVWVVV*KRSDRV
Trigger: CACCCTGTCTGATCTCTTTCAAACCACAACCCAGAC...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: TARSKYSWTLALKAVCCEANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCATTGCAGCACCTCCATaGGTGTTGCCTTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: SHLPSAADFQILVFIRLSIAAPP*VLPSQP
Trigger: TGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAAT...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTGGCACATGTGTCTCCTaGTTGCTTCTAACTAACCGC +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVGTCVS*LLLTNR
Trigger: GCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCC...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 2 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACTGGTTCACTCCAGGCTaGTGCAAAATGCTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHWFTPG*CKMLSS
Trigger: GGAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCA...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACTTAGTTGGTTTCAAATaGTGTATCCTGGATCAGGCC +
Preference number: 2 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYLVGFK*CILDQA
Trigger: GGCCTGATCCAGGATACATCATTTGAAACCAACTAA...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACACCAACAAGTTGTTCTaGAGTCTTTGGCAGCAAACA +
Preference number: 2 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYTNKLF*SLWQQT
Trigger: TGTTTGCTGCCAAAGACTTCAGAACAACTTGTTGGT...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGTCTTCCTTCAGCGGCTaGTTTTCAAATTTTGGTATT +
Preference number: 2 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGSSFSG*FSNFGI
Trigger: AATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGA...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTACAGTGAGCCACTTCTaGAATGCCTCTTACACAGCA +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVTVSHF*NASYTA
Trigger: TGCTGTGTAAGAGGCATTTCAGAAGTGGCTCACTGT...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTATAGACCACTCACAGTaGGCCACTTCTGAAATGCCT +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVIDHSQ*ATSEMP
Trigger: AGGCATTTCAGAAGTGGCTCACTGTGAGTGGTCTAT...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 2 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGTTCAACTCCTCACTATaGCATTTCCTATCAACTTCT +
Preference number: 2 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGFNSSL*HFLSTS
Trigger: AGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGAA...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 2 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGAAGACTAGGATTGATCTaGCATTACTTGACCAACAAG +
Preference number: 2 (lower is better)
Translates to: PTTKASNLDADSYMKMLGRLGLI*HYLTNK
Trigger: CTTGTTGGTCAAGTAATGCCAGATCAATCCTAGTCT...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTCACTACACTCTAGCCTaGGAGACAGAACAAGACTGT +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVHYTLA*ETEQDC
Trigger: ACAGTCTTGTTCTGTCTCCCAGGCTAGAGTGTAGTG...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: DLDEASILLRDTRLVCLGVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 2 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMQMVAE*YNWQLK
Trigger: TTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTG...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCCAGGCTGATGCAAAATaGTTTCTTCCTCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFQADAK*FLPQMV
Trigger: TACCATCTGAGGAAGAAAGCATTTTGCATCAGCCTG...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR GCA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCTTTGTGGCTCTCACTTaGTATAGAAAAGACAGTCTT +
Preference number: 2 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFFVALT*YRKDSL
Trigger: AAGACTGTCTTTTCTATAGCAAGTGAGAGCCACAAA...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACAACCTATATACAAGGTaGCGTATCAGGGCTGACAGA +
Preference number: 2 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHNLYTR*RIRADR
Trigger: TCTGTCAGCCCTGATACGGCACCTTGTATATAGGTT...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 2 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGATGAAAAGTCTGAGGTaGGTCAAGCAAATTGCAAAG +
Preference number: 2 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQMKSLR*VKQIAK
Trigger: CTTTGCAATTTGCTTGACTCACCTCAGACTTTTCAT...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR TCA 90 bp TGGATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGAAATCTATTCCTGATTaGAAAGGCAGTAGACCGAGA +
Preference number: 2 (lower is better)
Translates to: WMKETQDLYYFFPQLVSVKSIPD*KGSRPR
Trigger: TCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTT...CACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430514.6
3UTR-3UTR GCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCCATTTTGCCAACTATTaGAGCACCTCCATGGGTGTT +
Preference number: 2 (lower is better)
Translates to: SHLPSAADFQILVFIRLSHFANY*STSMGV
Trigger: AACACCCATGGAGGTGCTGCAATAGTTGGCAAAATG...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTCAACTGTCTGGGTTGTaGTTTGAAAGAGATCAGACA +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVQLSGL*FERDQT
Trigger: TGTCTGATCTCTTTCAAACCACAACCCAGACAGTTG...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTTTGAATTATGCTCAATaGCTTCCTCAGCACATTTCC +
Preference number: 2 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVLNYAQ*LPQHIS
Trigger: GGAAATGTGCTGAGGAAGTCATTGAGCATAATTCAA...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTGATCACAAGGAAGGCTaGCAATGTAAAATAAACATA +
Preference number: 2 (lower is better)
Translates to: SRRVGANEKPRHLKTSLADHKEG*QCKINI
Trigger: TATGTTTATTTTACATTGGCAGCCTTCCTTGTGATC...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430514.6
3UTR-3UTR CCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CCA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACAGACTAGGATTGATCTaGCATTACTTGACCAACAAG +
Preference number: 2 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHRLGLI*HYLTNK
Trigger: CTTGTTGGTCAAGTAATGCCAGATCAATCCTAGTCT...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATGTCACAATAGAGATATaGAACCATTTTAAGACCCAC +
Preference number: 2 (lower is better)
Translates to: DERDTGSLLFLPTACECDVTIEI*NHFKTH
Trigger: GTGGGTCTTAAAATGGTTTCATATCTCTATTGTGAC...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430514.6
3UTR-3UTR GCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCTTTGTGGCTCTCACTTaGTATAGAAAAGACAGTCTT +
Preference number: 2 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFFVALT*YRKDSL
Trigger: AAGACTGTCTTTTCTATAGCAAGTGAGAGCCACAAA...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTCAAAAACATCCAGGTTaGAGTAGCCCAGTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSQKHPG*SSPVVR
Trigger: CCTAACAACTGGGCTACTGCAACCTGGATGTTTTTG...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR TCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTATGAAAAGTCTGAGGTaGGTCAAGCAAATTGCAAAG +
Preference number: 2 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSMKSLR*VKQIAK
Trigger: CTTTGCAATTTGCTTGACTCACCTCAGACTTTTCAT...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR GCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAAGATCACAAGGAAGGCTaGCAATGTAAAATAAACATA +
Preference number: 2 (lower is better)
Translates to: LIEKAVDREKISHNRDMKDHKEG*QCKINI
Trigger: TATGTTTATTTTACATTGGCAGCCTTCCTTGTGATC...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
3UTR GCA 72 bp ACCTCTGCCCAGGGCACACCTGTGCTTGGTTCCACCTaGAGTCCACCACCCACCACAAAGGCCTCCAATCTG +
Preference number: 3 (lower is better)
Translates to: TSAQGTPVLGST*SPPPTTKASNL
Trigger: CAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAACCAAGCACAGGTGTGCCCTGGGCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCGCACCTCCATGGGTGTaGCCTTCTCAGCCACACCCC +
Preference number: 3 (lower is better)
Translates to: TYTKGQITVPAQGSVARSAPPWV*PSQPHP
Trigger: GGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGC...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 72 bp AGTCTGAAGTGGGCACCACACCAAGCACTGAAGAGCTaGCCACATTTGTGGAGGGGGAGCTCCCTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: SLKWAPHQALKS*PHLWRGSSLLL
Trigger: CAGAAGCAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGCCCACTTCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCATGTCTGGGTTGTGGTTaGAAAGAGATCAGACAGGGT +
Preference number: 3 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPCLGCG*KEIRQG
Trigger: ACCCTGTCTGATCTCTTTCAAACCACAACCCAGACA...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 72 bp ACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTaGCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: TFCQLLQHLHGC*LLSHTPKQASA
Trigger: AGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 72 bp GATAAAAAGACGTATTTCACACAAGCTCCATCCTCCTaGAAGCCGCAGTCTAGAGGGGAGGCCTCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: DKKTYFTQAPSS*KPQSRGEASQL
Trigger: CAGCTGGGAGGCCTCCCCTCTAGACTGCGGCTTCCAGGAGGATGGAGCTTGTGTGAAATACGTCTTTTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAGTTGTTCTGAAGTCTTaGGCAGCAAACATCTCTTCA +
Preference number: 3 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPVVLKS*AANISS
Trigger: TGAAGAGATGTTTGCTGCCAAAGACTTCAGAACAAC...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGAGGGCACACCTGTGCTaGGTTCCACCTGCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGRAHLC*VPPAVH
Trigger: GTGGACTGCAGGTGGAACCAAGCACAGGTGTGCCCT...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCAAGAGCTGGCCACATTaGTGGAGGGGGAGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFKSWPH*WRGSSL
Trigger: CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp TCTGATCCCGTGGCTGTGGAGGCTCTAGGAGAAAAGTaGCTCTCTACACTCGTCCTAGTGAGAGATGGCAAG +
Preference number: 3 (lower is better)
Translates to: SDPVAVEALGEK*LSTLVLVRDGK
Trigger: CTTGCCATCTCTCACTAGGACGAGTGTAGAGAGTCACTTTTCTCCTAGAGCCTCCACAGCCACGGGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp GCCTGCATGAATAGCTTGAGGTCTGAGGCATTTCAATaGGGCTCAGGTGGTCGGGCTGTTGGCAAATGTGAC +
Preference number: 3 (lower is better)
Translates to: ACMNSLRSEAFQ*GSGGRAVGKCD
Trigger: GTCACATTTGCCAACAGCCCGACCACCTGAGCCTCATTGAAATGCCTCAGACCTCAAGCTATTCATGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 72 bp CAGAGGCAGTTTCCACAATGCCAACTGTCTGGGTTGTaGTTTGAAAGAGATCAGACAGGGTGCTCCAAGCCG +
Preference number: 3 (lower is better)
Translates to: QRQFPQCQLSGL*FERDQTGCSKP
Trigger: CGGCTTGGAGCACCCTGTCTGATCTCTTTCAAACCACAACCCAGACAGTTGGCATTGTGGAAACTGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTGTTGTTCTGAAGTCTTaGGCAGCAAACATCTCTTCA +
Preference number: 3 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPVVLKS*AANISS
Trigger: TGAAGAGATGTTTGCTGCCAAAGACTTCAGAACAAC...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCTGTCTGGGTTGTGGTTaGAAAGAGATCAGACAGGGT +
Preference number: 3 (lower is better)
Translates to: TYTKGQITVPAQGSVARSCLGCG*KEIRQG
Trigger: ACCCTGTCTGATCTCTTTCAAACCACAACCCAGACA...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAATTGGAACGGATATCTaGGAAAAGCATGTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPIGTDI*EKHVCS
Trigger: AGAACAAACATGCTTTTCCAAGATATCCGTTCCAAT...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 72 bp GAAAAGTCTGAGGTGAGTCAAGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGG +
Preference number: 3 (lower is better)
Translates to: EKSEVSQANCKD*QVRRCYPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CAA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCAAATTGCAAAGATaGGCAGGTGAGGAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHSKLQR*AGEEVL
Trigger: TAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCT...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CAA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCCTTGAGAGACTAGGATaGATCTGGCATTACTTGACC +
Preference number: 3 (lower is better)
Translates to: TYTKGQITVPAQGSVARSLERLG*IWHYLT
Trigger: GGTCAAGTAATGCCAGATCAATCCTAGTCTCTCAAG...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp CAAGAGCCAGCATCCCTGTTCTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATCAGAGGATGCCAAAGT +
Preference number: 3 (lower is better)
Translates to: QEPASLFFSLRH*GMCEFIRGCQS
Trigger: ACTTTGGCATCCTCTGATGAACTCACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGGATGCTGGCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR TCA 72 bp GAGTGTGTCCTGGAGACCAGCAGCATGAGCATCACCTaGGAACTTGTTAGAAACGCAGCTTTTCAGACCTCA +
Preference number: 3 (lower is better)
Translates to: ECVLETSSMSIT*ELVRNAAFQTS
Trigger: TGAGGTCTGAAAAGCTGCGTTTCTAACAAGTTCTCAGGTGATGCTCATGCTGCTGGTCTCCAGGACACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp CACCAAGGAGGCCAATGGGCTACTTTGTGTTGCTCCTaGAACACATATACCAAGGGCCAGATAACGGTACCA +
Preference number: 3 (lower is better)
Translates to: HQGGQWATLCCS*NTYTKGQITVP
Trigger: TGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACACAAAGTAGCCCATTGGCCTCCTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 72 bp CTGTTCCTGCCTCCTAAGCAGAGGCAGTTTCCACAATaGCAACTGTCTGGGTTGTGGTTTGAAAGAGATCAG +
Preference number: 3 (lower is better)
Translates to: LFLPPKQRQFPQ*QLSGLWFERDQ
Trigger: CTGATCTCTTTCAAACCACAACCCAGACAGTTGGCATTGTGGAAACTGCCTCTGCTTAGGAGGCAGGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 72 bp TGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTaGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAG +
Preference number: 3 (lower is better)
Translates to: CFLPQMVAECYN*QLKQPNGHSQK
Trigger: CTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CAA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGCTTGAGAGACTAGGATaGATCTGGCATTACTTGACC +
Preference number: 3 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGLERLG*IWHYLT
Trigger: GGTCAAGTAATGCCAGATCAATCCTAGTCTCTCAAG...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 72 bp ATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTaGACAGGGCAAGAAGGGAGGAAGGAGTTCCCAATC +
Preference number: 3 (lower is better)
Translates to: MMVTGSQRMTMS*TGQEGRKEFPI
Trigger: GATTGGGAACTCCTTCCTCCCTTCTTGCCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATAACATGGCAAAATGCTaGGATGAGTCAACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHNMAKC*DESTSL
Trigger: CAGGGAAGTTGACTCATCCAAGCATTTTGCCATGTT...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CAA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGGGTGAGTCAAGCAAATaGCAAAGATTGGCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQGESSK*QRLAGE
Trigger: CTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR TCA 72 bp TACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTaGGGATCTCTGCCAAATACTGTTCAGTCTAACCTA +
Preference number: 3 (lower is better)
Translates to: YPASSPCHYCRP*GSLPNTVQSNL
Trigger: TAGGTTAGACTGAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 72 bp GATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAACAGCCAAACGGGCAC +
Preference number: 3 (lower is better)
Translates to: DAKCFLPQMVAE*YNWQLKQPNGH
Trigger: GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CAA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACTGGAATCAGCACTGTTaGGGTTCCTTCCTCTTGCCC +
Preference number: 3 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHWNQHC*GSFLLP
Trigger: GGGCAAGAGGAAGGAACCCAAACAGTGCTGATTCCA...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp GACAAGGCTGGTGAGAACAGTATAGACCACTCACAGTaGGCCACTTCTGAAATGCCTCTTACACAGCAATTT +
Preference number: 3 (lower is better)
Translates to: DKAGENSIDHSQ*ATSEMPLTQQF
Trigger: AAATTGCTGTGTAAGAGGCATTTCAGAAGTGGCTCACTGTGAGTGGTCTATACTGTTCTCACCAGCCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 72 bp CAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATaGAGACTCATATATGAAGATGTTAGGAAGAAGAAT +
Preference number: 3 (lower is better)
Translates to: QSTTHHKGLQSG*RLIYEDVRKKN
Trigger: ATTCTTCTTCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CCA 72 bp GTTGCAGTAGCCCAGTTGTTAGGCACATGTGTCTCCTaGTTGCTTCTAACTAACCGCATTCTCATTAGATAC +
Preference number: 3 (lower is better)
Translates to: VAVAQLLGTCVS*LLLTNRILIRY
Trigger: GTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCCTAACAACTGGGCTACTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAGCAAATTGCAAAGATaGGCAGGTGAGGAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: TARSKYSWTLALKAVCCESKLQR*AGEEVL
Trigger: TAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR-3UTR CAA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTTGTATATTGGGATATTaGATGGAATGGCCTTGTAGA +
Preference number: 3 (lower is better)
Translates to: LQKAFKECARWGFWALLPCILGY*MEWPCR
Trigger: TCTACAAGGCCATTCCATCAAATATCCCAATATACA...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTCAGGTGGTCGGGCTGTaGGCAAATGTGACCTTCACC +
Preference number: 3 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSQVVGL*ANVTFT
Trigger: GGTGAAGGTCACATTTGCCAACAGCCCGACCACCTG...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp TGGATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGCTGGGATTACCTTTTTaGATCACAAGGAAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: WMKETQDLYYFFPQLVSVLGLPF*ITRKAA
Trigger: GGCAGCCTTCCTTGTGATCAAAAAAGGTAATCCCAG...CACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
3UTR TCA 72 bp CAAAATGCTTGGATGAGTCAACTTCCCTGCTGTAGGTaGGGCGATTTGGATGAAGCATCCATACTTTTAAGA +
Preference number: 3 (lower is better)
Translates to: QNAWMSQLPCCR*GDLDEASILLR
Trigger: TCTTAAAAGTATGGATGCTTCATCCAAATCGCCTCACCTACAGCAGGGAAGTTGACTCATCCAAGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
3UTR GCA 72 bp CTGCCAAATACTGTTCAGTCTAACCTATATACAAGGTaGCGTATCAGGGCTGACAGAGGGTTTAAGAAACAT +
Preference number: 3 (lower is better)
Translates to: LPNTVQSNLYTR*RIRADRGFKKH
Trigger: ATGTTTCTTAAACCCTCTGTCAGCCCTGATACGGCACCTTGTATATAGGTTAGACTGAACAGTATTTGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTAACATGGCAAAATGCTaGGATGAGTCAACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVNMAKC*DESTSL
Trigger: CAGGGAAGTTGACTCATCCAAGCATTTTGCCATGTT...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR GCA 72 bp CACTTTTACCTGAGCCTGGTATTCAACTCCTCACTATaGCATTTCCTATCAACTTCTCTGAACCTTAGTAAC +
Preference number: 3 (lower is better)
Translates to: HFYLSLVFNSSL*HFLSTSLNLSN
Trigger: GTTACTAAGGTTCAGAGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGAATACCAGGCTCAGGTAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR-3UTR CAA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACTGGGATTACCTTTTTaGATCACAAGGAAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: LIEKAVDREKISHNRDMKLGLPF*ITRKAA
Trigger: GGCAGCCTTCCTTGTGATCAAAAAAGGTAATCCCAG...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
3UTR TCA 72 bp GGATTGATCTGGCATTACTTGACCAACAAGTTGTTCTaGAGTCTTTGGCAGCAAACATCTCTTCAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: GLIWHYLTNKLF*SLWQQTSLQKV
Trigger: AACTTTCTGAAGAGATGTTTGCTGCCAAAGACTTCAGAACAACTTGTTGGTCAAGTAATGCCAGATCAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp TCAACTCCTCACTATGCCATTTCCTATCAACTTCTCTaGACCTTAGTAACTGCAACTATAAAATGGGACAGT +
Preference number: 3 (lower is better)
Translates to: STPHYAISYQLL*TLVTATIKWDS
Trigger: ACTGTCCCATTTTATAGTTGCAGTTACTAAGGTTCAGAGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR TCA 72 bp GTTAGGAAGAAGAATTTCTGTGTATATTGGGATATTTaGTGGAATGGCCTTGTAGAAACTTTTCCAAACTTG +
Preference number: 3 (lower is better)
Translates to: VRKKNFCVYWDI*WNGLVETFPNL
Trigger: CAAGTTTGGAAAAGTTTCTACAAGGCCATTCCATCAAATATCCCAATATACACAGAAATTCTTCTTCCTAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGTGGCAGGTGAGGAGGTaGTACCCTGTACGGCATGGG +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLWQVRR*YPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCA...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGGGCCTCAGCTTTCCCTaGCACTCCTCTGCACATTTC +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLGLSFP*HSSAHF
Trigger: GAAATGTGCAGAGGAGTGTCAGGGAAAGCTGAGGCC...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCGAAATGCGGTGGCCATaGGATGAGAAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLEMRWP*DEKQRQ
Trigger: CTGCCGCTGCTTCTCATCGCATGGCCACCGCATTTC...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCCACCTCCATGGGTGTTaGCTTCTCAGCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLHLHGC*LLSHTP
Trigger: AGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTG...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCATCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPSRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCACAAGCACTGAAGAGCTaGCCACATTTGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPQALKS*PHLWRG
Trigger: CCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTG...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCGGTGGCCATGCGATaGGAAGCAGCGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTAVAMR*EAAAGH
Trigger: ATGCCCTGCCGCTGCTTCTCATCGCATGGCCACCGC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAGCGGTGGCCATGCGATaGGAAGCAGCGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKAVAMR*EAAAGH
Trigger: ATGCCCTGCCGCTGCTTCTCATCGCATGGCCACCGC...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCCACCACACCAAGCACTaGAGAGCTGGCCACATTTGT +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLHHTKH*RAGHIC
Trigger: ACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTG...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCTGGCAGGTGAGGAGGTaGTACCCTGTACGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TYTKGQITVPAQGSVARSWQVRR*YPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCA...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCTGCCTCTCTGCACATaGAGCTCACTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPLPLCT*SSLLLS
Trigger: TGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAG...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAAAAGAGTGTGCCAGGTaGGGATTCTGGGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPKECAR*GFWALL
Trigger: TAACAGTGCCCAGAATCCCCACCTGGCACACTCTTT...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 72 bp CTGAGGCATTTCAATGAGGCTCAGGTGGTCGGGCTGTaGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRHFNEAQVVGL*ANVTFTLQSPQ
Trigger: CTGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCCTCATTGAAATGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCGCGGTGGCCATGCGATaGGAAGCAGCGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSAVAMR*EAAAGH
Trigger: ATGCCCTGCCGCTGCTTCTCATCGCATGGCCACCGC...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTAGGCCTTCAGCTTCTTaGCCAAGGGCCATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPRPSAS*PRAMWN
Trigger: ATTCCACATGGCCCTTGGTCAAGAAGCTGAAGGCCT...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTAAAGCATGTTTGTTCTaGTCCCGTGGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTKACLF*SRGCGG
Trigger: GCCTCCACAGCCACGGGATCAGAACAAACATGCTTT...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCAATTACCGCCTGGCCTGAGAAATaGGGTGGCCATGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: EPHPCHLLAMQNRVKPITAWPEK*GGHAMR
Trigger: TCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGC...GGTAATTGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACTGGCAGGTGAGGAGGTaGTACCCTGTACGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHWQVRR*YPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCA...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGTGGCAGGTGAGGAGGTaGTACCCTGTACGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTWQVRR*YPVRHG
Trigger: CCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCA...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAACCCAGGGCACACCTGTaGTTGGTTCCACCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQPRAHL*LVPPAV
Trigger: GACTGCAGGTGGAACCAAGCACAGGTGTGCCCTGGG...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCCAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: TYTKGQITVPAQGSVARSQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGTCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGLEPHPCHLLAMQNRVKSRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...CTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGTCCACAGAGCCCAGGTaGTCTATGGCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQSTEPR*SMAAEW
Trigger: CCACTCAGCAGCCATAGATCACCTGGGCTCTGTGGA...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTACCAGCAGATGGTCCTaGCACATAGAAGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPTSRWS*HIEVSP
Trigger: TGGTGAGACTTCTATGTGTCAGGACCATCTGCTGGT...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAGCCTGGCCTGAGAAATaGGGTGGCCATGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEAWPEK*GGHAMR
Trigger: TCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGC...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: LGLEPHPCHLLAMQNRVKSEWSF*RMVRTL
Trigger: AAGTGTGCGGACCATCCTGCAGAACGACCACTCACT...CTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp TCCCACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGGAAATGCGGTGGCCATaGGATGAGAAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SHHARVSRDQVLESVNLGEMRWP*DEKQRQ
Trigger: CTGCCGCTGCTTCTCATCGCATGGCCACCGCATTTC...CCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGTGCTTGGTTCCACCTaGAGTCCACCACCCACCACA +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWVLGST*SPPPTT
Trigger: TGTGGTGGGTGGTGGACTGCAGGTGGAACCAAGCAC...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGTGCTTGGTTCCACCTaGAGTCCACCACCCACCACA +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTVLGST*SPPPTT
Trigger: TGTGGTGGGTGGTGGACTGCAGGTGGAACCAAGCAC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGCAAAAACATCCAGGTTaGAGTAGCCCAGTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLQKHPG*SSPVVR
Trigger: CCTAACAACTGGGCTACTGCAACCTGGATGTTTTTG...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAACAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCCAAGCACTGAAGAGCTaGCCACATTTGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TYTKGQITVPAQGSVARSQALKS*PHLWRG
Trigger: CCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTG...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGGGGAGGAGTCTGAAGTaGGCACCACACCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQGRSLK*APHQAL
Trigger: CAGTGCTTGGTGTGGTGCCCACTTCAGACTCCTCCC...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCACTTCAATCTCTGCTGTaGCATTCAGTGGAGGATTTA +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPLQSLL*HSVEDL
Trigger: TAAATCCTCCACTGAATGTCACAGCAGAGATTGAAG...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR TCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAGCAAAGATTGGCAGGTaGGGAGGTGCTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKAKIGR*GGATLY
Trigger: GTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGC...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTCAGGCCTCTGGAGCTTaGGATAATTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTQASGA*DNFSLS
Trigger: AGAGAGAGAGAAATTATCTCAAGCTCCAGAGGCCTG...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAACCAACAAGTTGTTCTaGAGTCTTTGGCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPTNKLF*SLWQQT
Trigger: TGTTTGCTGCCAAAGACTTCAGAACAACTTGTTGGT...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCGGCCGGTGTATCGCTTaGGCCCAGGAGTTCGAGATG +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFGRCIA*AQEFEM
Trigger: CATCTCGAACTCCTGGGCTCAAGCGATACACCGGCC...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGGCTGTTGGCAAATGTaGCCTTCACCCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTGCWQM*PSPSSL
Trigger: GAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGTGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: LGLEPHPCHLLAMQNRVKCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...CTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGAGAGATCAGACAGGGTaGTCCAAGCCGCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTRDQTG*SKPPQK
Trigger: CTTTTGGGGCGGCTTGGAGCACCCTGTCTGATCTCT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWLASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACCTGCCTCTCTGCACATaGAGCTCACTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHLPLCT*SSLLLS
Trigger: TGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAG...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGCTGCCTCTCTGCACATaGAGCTCACTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLLPLCT*SSLLLS
Trigger: TGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAG...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGCAACTGTCTGGGTTGTaGTTTGAAAGAGATCAGACA +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLQLSGL*FERDQT
Trigger: TGTCTGATCTCTTTCAAACCACAACCCAGACAGTTG...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTAGCCCAGGTGATCTATaGCTGCTGAGTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPSPGDL*LLSGGR
Trigger: CCTCCCTCCACTCAGCAGCCATAGATCACCTGGGCT...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAACCCTGTTCTTTTCACTaGGGCACTGAGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKPCSFH*GTEACV
Trigger: CACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGG...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACCCCTGTTCTTTTCACTaGGGCACTGAGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHPCSFH*GTEACV
Trigger: CACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGG...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTGCAAAGATTGGCAGGTaGGGAGGTGCTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPAKIGR*GGATLY
Trigger: GTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGC...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGCAACTGTGCAGGAGCTaGACTGGAACTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGQLCRS*TGTPNN
Trigger: GTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTG...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCTTAGTTGGTTTCAAATaGTGTATCCTGGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLLVGFK*CILDQA
Trigger: GGCCTGATCCAGGATACATCATTTGAAACCAACTAA...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGGCTGTTGGCAAATGTaGCCTTCACCCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPGCWQM*PSPSSL
Trigger: GAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGESEWSF*RMVRTL
Trigger: AAGTGTGCGGACCATCCTGCAGAACGACCACTCACT...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCCATGGAGCTCACTGCTaGTCTCACTTGAACATCGTA +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLAHGAHC*SHLNIV
Trigger: TACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATG...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCAGAGCCCTGCCTCTCTaGACATGGAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSRALPL*TWSSLL
Trigger: CAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCT...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCGAAATGCGGTGGCCATaGGATGAGAAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFEMRWP*DEKQRQ
Trigger: CTGCCGCTGCTTCTCATCGCATGGCCACCGCATTTC...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCTCAAACTCTTTGACTTaGTATGACAAGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLSNSLT*YDKAGE
Trigger: CTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGA...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLGRSAG*SAHLLK
Trigger: TTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACC...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHLASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLLASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RVSRDQVLESVNLGLEPHGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...ATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTCTGCCTCTCTGCACATaGAGCTCACTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPLPLCT*SSLLLS
Trigger: TGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAG...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAATTTCCGTCTCACTaGACCCAGCTTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPQFPSH*TQLSHS
Trigger: ACTATGAGAAAGCTGGGTCCAGTGAGACGGAAATTG...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCAGCTGGCCACATTTGTaGAGGGGGAGCTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFSWPHL*RGSSLL
Trigger: AAGCAGGGAGCTCCCCCTCCACAAATGTGGCCAGCT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGAGCCCAGGTGATCTATaGCTGCTGAGTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGSPGDL*LLSGGR
Trigger: CCTCCCTCCACTCAGCAGCCATAGATCACCTGGGCT...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGTCAATGAGGCTCAGGTaGTCGGGCTGTTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWSMRLR*SGCWQM
Trigger: CATTTGCCAACAGCCCGACCACCTGAGCCTCATTGA...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCATCTCTATATAACAGATaGCTTCAATTTCCGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPSLYNR*LQFPSH
Trigger: GTGAGACGGAAATTGAAGTCATCTGTTATATAGAGA...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAATCCTCAGATGGTAGCTaGGTGCTACAATTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQSSDGS*VLQLAA
Trigger: AGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGA...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGTCCTCAGATGGTAGCTaGGTGCTACAATTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWSSDGS*VLQLAA
Trigger: AGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGA...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATGCAGCGGCAGGGCATTaGGAACGAACCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: RVSRDQVLESVNLGLEPHAAAGH*ERTLSL
Trigger: CAGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGC...ATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp GGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCAATACATGCGCCACGATaGTCATATCCTGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: GLEPHPCHLLAMQNRVKPIHAPR*SYPVYR
Trigger: TCTGTAGACAGGATATGATCATCGTGGCGCATGTAT...TGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGGGGGTCACTTTTACCTaGGCCTGGTATTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQGVTFT*AWYSTP
Trigger: AGGAGTTGAATACCAGGCTCAGGTAAAAGTGACCCC...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCACCACACCAAGCACTaGAGAGCTGGCCACATTTGT +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPHHTKH*RAGHIC
Trigger: ACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTG...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAACCATGCTGCACGCAGTaGATTCCAAATGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKPCCTQ*IPNAKE
Trigger: TTCCTTGGCATTTGGAATTCACTGCGTGCAGCATGG...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACATCTGAGGCATTTCAATaGGGCTCAGGTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATSEAFQ*GSGGRA
Trigger: AGCCCGACCACCTGAGCCTCATTGAAATGCCTCAGA...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACGCCTGGCCTGAGAAATaGGGTGGCCATGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNAWPEK*GGHAMR
Trigger: TCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGC...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWPGKPA*DISPQC
Trigger: ACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGG...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCCCACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SHHARVSRDQVLESVNLGPGKPA*DISPQC
Trigger: ACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGG...CCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LGLEPHPCHLLAMQNRVKSSFNL*CDIQWR
Trigger: CCTCCACTGAATGTCACAGCAGAGATTGAAGGAACT...CTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGAGAGCCCTGCCTCTCTaGACATGGAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQRALPL*TWSSLL
Trigger: CAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCT...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTGAGTTCATCAGAGGATaGCAAAGTGACAGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTEFIRG*QSDSQN
Trigger: GTTTTGACTGTCACTTTGGCATCCTCTGATGAACTC...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCACTTTCAGAGTTGGTTTaGTCTCTTCAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLEPHPCHLLAMQNRVKPLSELV*SLQEWE
Trigger: TTCCCACTCCTGAAGAGAGCAAACCAACTCTGAAAG...TGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCAATTACCGCCACTTGTTGGCCATaGAGAACAGAGTTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: EPHPCHLLAMQNRVKPITATCWP*RTELSQ
Trigger: TTGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGC...GGTAATTGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAATCCCTGACACTCCTCTaGACATTTCTGGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQSLTLL*TFLGSL
Trigger: AAGTGACCCCAGAAATGTGCAGAGGAGTGTCAGGGA...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAATCCCTGACACTCCTCTaGACATTTCTGGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKSLTLL*TFLGSL
Trigger: AAGTGACCCCAGAAATGTGCAGAGGAGTGTCAGGGA...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCACCTCCATGGGTGTTaGCTTCTCAGCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQHLHGC*LLSHTP
Trigger: AGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTG...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTLASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TGGTTGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCCTCCCCCTGTTCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WLLLTNRILIRYPASSPCSRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...ACAGGGGGAGGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTGTAGGTGAGGCGATTTaGATGAAGCATCCATACTTT +
Preference number: 4 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTVGEAI*MKHPYF
Trigger: AAAGTATGGATGCTTCATCCAAATCGCCTCACCTAC...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCCCACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGGTGCAGGAGCTGAACTaGAACTCCCAACAACCAAAC +
Preference number: 4 (lower is better)
Translates to: SHHARVSRDQVLESVNLGVQELN*NSQQPN
Trigger: GTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCAC...CCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGGGATATTTGATGGAATaGCCTTGTAGAAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: APHQALKSWPHLWRGSSLGYLME*PCRNFS
Trigger: GGAAAAGTTTCTACAAGGCCATTCCATCAAATATCC...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCACCAAGGAGGCCAATaGGCTACTTTGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPHQGGQ*ATLCCS
Trigger: GGAGCAACACAAAGTAGCCCATTGGCCTCCTTGGTG...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCATTGGAACGGATATCTTaGAAAAGCATGTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPLERIS*KSMFVL
Trigger: CAGAACAAACATGCTTTTCCAAGATATCCGTTCCAA...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RVSRDQVLESVNLGLEPHGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...ATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAATTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTACAACTGTGCAGGAGCTaGACTGGAACTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: HHARVSRDQVLESVNLGLQLCRS*TGTPNN
Trigger: GTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTG...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTAGGCAGCTTCCTTCATaGTGGGATGGCAACACGTTT +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPRQLPS*WDGNTF
Trigger: AAACGTGTTGCCATCCCATCATGAAGGAAGCTGCCT...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAACAGGCCTCTGGAGCTTaGGATAATTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEQASGA*DNFSLS
Trigger: AGAGAGAGAGAAATTATCTCAAGCTCCAGAGGCCTG...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCAGGCCTTCAGCTTCTTaGCCAAGGGCCATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFRPSAS*PRAMWN
Trigger: ATTCCACATGGCCCTTGGTCAAGAAGCTGAAGGCCT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGGGCCGGTGTATCGCTTaGGCCCAGGAGTTCGAGATG +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASGRCIA*AQEFEM
Trigger: CATCTCGAACTCCTGGGCTCAAGCGATACACCGGCC...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGTCTGGGTTGTGGTTTaGAAGAGATCAGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHVWVVV*KRSDRV
Trigger: CACCCTGTCTGATCTCTTTCAAACCACAACCCAGAC...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTCTGGGTTGTGGTTTaGAAGAGATCAGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPVWVVV*KRSDRV
Trigger: CACCCTGTCTGATCTCTTTCAAACCACAACCCAGAC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTTCCACAGAGCCCAGGTaGTCTATGGCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPASTEPR*SMAAEW
Trigger: CCACTCAGCAGCCATAGATCACCTGGGCTCTGTGGA...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAACAGTGAGCCACTTCTaGAATGCCTCTTACACAGCA +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKTVSHF*NASYTA
Trigger: TGCTGTGTAAGAGGCATTTCAGAAGTGGCTCACTGT...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCTGGCCTGAGAAATaGGGTGGCCATGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVAWPEK*GGHAMR
Trigger: TCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGC...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLARMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHPGKPA*DISPQC
Trigger: ACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGG...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACAGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGAGAGCCCTGCCTCTCTaGACATGGAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRERALPL*TWSSLL
Trigger: CAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCT...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTTCCCAACAACCAAACTaGTGTCAAACGAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPSQQPN*CQTKES
Trigger: AGATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGA...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACAGAGATCAGACAGGGTaGTCCAAGCCGCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNRDQTG*SKPPQK
Trigger: CTTTTGGGGCGGCTTGGAGCACCCTGTCTGATCTCT...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGAATCAGGATGTTCTTTaGCCACGTGGATTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTNQDVL*PRGFFP
Trigger: GGGGAAGAATCCACGTGGGCAAAGAACATCCTGATT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAATCAGGATGTTCTTTaGCCACGTGGATTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHNQDVL*PRGFFP
Trigger: GGGGAAGAATCCACGTGGGCAAAGAACATCCTGATT...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGGRSAG*SAHLLK
Trigger: TTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACC...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TTCATCAGAGGATGCCAAAGTGACAGTCAAAACACAGAATCCTCCAGGGTCTCATCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FIRGCQSDSQNTESSRVSSRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...TGAGACCCTGGAGGATTCTGTGTTTTGACTGTCACTTTGGCATCCTCTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438560.5
CDS-3UTR CCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDREGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCTGGAAAAGCAGACACTaGTTTCTCCCATTGGATAGA +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLAWKSRH*FLPLDR
Trigger: TCTATCCAATGGGAGAAACCAGTGTCTGCTTTTCCA...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCTCCTTCATGATGGGATaGCAACACGTTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLASFMMG*QHVFSK
Trigger: CTTAGAGAAAACGTGTTGCCATCCCATCATGAAGGA...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCATCGTCTCTTTTGATATaGGGTGATATATTAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPSSLLI*GDILAL
Trigger: TAGAGCTAATATATCACCCCATATCAAAAGAGACGA...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGTAATCCCAGTACTTTaGAAGGCTGAGGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHVIPVL*KAEAGV
Trigger: TACACCGGCCTCAGCCTTCCAAAGTACTGGGATTAC...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCTCAATGAGGCTCAGGTaGTCGGGCTGTTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSSMRLR*SGCWQM
Trigger: CATTTGCCAACAGCCCGACCACCTGAGCCTCATTGA...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 72 bp CCCAATCCACCAAGGAGGCCAATGGGCTACTTTGTGTaGCTCCTGAAACACATATACCAAGGGCCAGATAAC +
Preference number: 4 (lower is better)
Translates to: PNPPRRPMGYFV*LLKHIYQGPDN
Trigger: GTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACACAAAGTAGCCCATTGGCCTCCTTGGTGGATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHDRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQDRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGTCCTCAGATGGTAGCTaGGTGCTACAATTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGSSDGS*VLQLAA
Trigger: AGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGA...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCCAACTGTGCAGGAGCTaGACTGGAACTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVAQLCRS*TGTPNN
Trigger: GTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTG...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAAGGCAGCTTCCTTCATaGTGGGATGGCAACACGTTT +
Preference number: 4 (lower is better)
Translates to: HHARVSRDQVLESVNLGLRQLPS*WDGNTF
Trigger: AAACGTGTTGCCATCCCATCATGAAGGAAGCTGCCT...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCAGGCAGCTTCCTTCATaGTGGGATGGCAACACGTTT +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSRQLPS*WDGNTF
Trigger: AAACGTGTTGCCATCCCATCATGAAGGAAGCTGCCT...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCAGCGGCAGGGCATTaGGAACGAACCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVAAAGH*ERTLSL
Trigger: CAGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGC...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACGCAGCGGCAGGGCATTaGGAACGAACCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYAAAGH*ERTLSL
Trigger: CAGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGC...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AAAACACATGTAATCTGCTATCCCTGCTGTTGTTTTTATTTCAGATACGGTGTGGCGGTGGCCATGCGATaGGAAGCAGCGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KTHVICYPCCCFYFRYGVAVAMR*EAAAGH
Trigger: ATGCCCTGCCGCTGCTTCTCATCGCATGGCCACCGC...CACACCGTATCTGAAATAAAAACAACAGCAGGGATAGCAGATTACATGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGATACATGCGCCACGATaGTCATATCCTGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGIHAPR*SYPVYR
Trigger: TCTGTAGACAGGATATGATCATCGTGGCGCATGTAT...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR GCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTGCCTGGCCTGAGAAATaGGGTGGCCATGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFAWPEK*GGHAMR
Trigger: TCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGC...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVASEWSF*RMVRTL
Trigger: AAGTGTGCGGACCATCCTGCAGAACGACCACTCACT...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQSEWSF*RMVRTL
Trigger: AAGTGTGCGGACCATCCTGCAGAACGACCACTCACT...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TGGTTGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCCTCCCCCTGTTGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: WLLLTNRILIRYPASSPCCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...ACAGGGGGAGGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQSSFNL*CDIQWR
Trigger: CCTCCACTGAATGTCACAGCAGAGATTGAAGGAACT...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWSSFNL*CDIQWR
Trigger: CCTCCACTGAATGTCACAGCAGAGATTGAAGGAACT...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCGCACATGGAGCTCACTaGTGCTCTCACTTGAACATC +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFAHGAH*CSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGC...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR GCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGAGAGCCCTGCCTCTCTaGACATGGAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASRALPL*TWSSLL
Trigger: CAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCT...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAACTTTCAGAGTTGGTTTaGTCTCTTCAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGELSELV*SLQEWE
Trigger: TTCCCACTCCTGAAGAGAGCAAACCAACTCTGAAAG...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGGAAATGCGGTGGCCATaGGATGAGAAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMEMRWP*DEKQRQ
Trigger: CTGCCGCTGCTTCTCATCGCATGGCCACCGCATTTC...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTTTTGTGGCTCTCACTTaGTATAGAAAAGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTFVALT*YRKDSL
Trigger: AAGACTGTCTTTTCTATAGCAAGTGAGAGCCACAAA...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTCAGCTTTCCCTGACACTCATTACTATAAGACAGTaGAGGCTTGTCAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: GVAFSATPLSRPQLSLTLITIRQ*RLVKIQ
Trigger: TTGAATCTTGACAAGCCTGCACTGTCTTATAGTAAT...GAGTGTCAGGGAAAGCTGAGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAACCTATATACAAGGTaGCGTATCAGGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGNLYTR*RIRADR
Trigger: TCTGTCAGCCCTGATACGGCACCTTGTATATAGGTT...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPALASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGTCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRESRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCGATTTATTTGATCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLADLFDQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGATCAAATAAATC...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGCTGCCTCTCTGCACATaGAGCTCACTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRELPLCT*SSLLLS
Trigger: TGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAG...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACCAATTTCCGTCTCACTaGACCCAGCTTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHQFPSH*TQLSHS
Trigger: ACTATGAGAAAGCTGGGTCCAGTGAGACGGAAATTG...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAACAATTTCCGTCTCACTaGACCCAGCTTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKQFPSH*TQLSHS
Trigger: ACTATGAGAAAGCTGGGTCCAGTGAGACGGAAATTG...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCCAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAGTTCATCATTTCCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQVHHFQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGGAAATGATGAAC...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418488.6
CDS-3UTR CCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGGGGGTGAGGAATTTGTaGCTCTCACTTGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQGVRNL*LSLAIE
Trigger: TTCTATAGCAAGTGAGAGCCACAAATTCCTCACCCC...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATTCCTCTGCACATTTCTaGGGTCACTTTTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHSSAHF*GHFYLS
Trigger: GCTCAGGTAAAAGTGACCCCAGAAATGTGCAGAGGA...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAGCTGGCCACATTTGTaGAGGGGGAGCTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCESWPHL*RGSSLL
Trigger: AAGCAGGGAGCTCCCCCTCCACAAATGTGGCCAGCT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGGGGAGGAGTCTGAAGTaGGCACCACACCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASGRSLK*APHQAL
Trigger: CAGTGCTTGGTGTGGTGCCCACTTCAGACTCCTCCC...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAACAGCTCAGGGAAGTGTaGCAAGGAGCTCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEQLREV*QGAPQS
Trigger: GCTCTGTGGAGCTCCTTGCCACACTTCCCTGAGCTG...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCCACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLAHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGAACAAGCCAGGTGCAGTaGAGGGAAACTTGGTATGAC +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGTSQVQ*RETWYD
Trigger: GTCATACCAAGTTTCCCTTCACTGCACCTGGCTTGT...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCCCTGTTCTTTTCACTaGGGCACTGAGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRPCSFH*GTEACV
Trigger: CACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGGCAAAGATTGGCAGGTaGGGAGGTGCTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMAKIGR*GGATLY
Trigger: GTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGC...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGGCAAAGATTGGCAGGTaGGGAGGTGCTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQAKIGR*GGATLY
Trigger: GTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGC...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCTTATCTCCTTTATCTTaGGAACCCCACATAAATAGG +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLALSPLS*EPHINR
Trigger: CCTATTTATGTGGGGTTCTCAAGATAAAGGAGATAA...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACAGGCAGCTTCCTTCATaGTGGGATGGCAACACGTTT +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNRQLPS*WDGNTF
Trigger: AAACGTGTTGCCATCCCATCATGAAGGAAGCTGCCT...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGACCAACAAGTTGTTCTaGAGTCTTTGGCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTTNKLF*SLWQQT
Trigger: TGTTTGCTGCCAAAGACTTCAGAACAACTTGTTGGT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACCCGATGGATCAAAACTaGCTAAAACACCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHPMDQN*LKHLQK
Trigger: TTTCTGGAGGTGTTTTAGTCAGTTTTGATCCATCGG...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAACCGATGGATCAAAACTaGCTAAAACACCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEPMDQN*LKHLQK
Trigger: TTTCTGGAGGTGTTTTAGTCAGTTTTGATCCATCGG...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGGCCTCAGCTTTCCCTaGCACTCCTCTGCACATTTC +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEGLSFP*HSSAHF
Trigger: GAAATGTGCAGAGGAGTGTCAGGGAAAGCTGAGGCC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCATAGACCACTCACAGTaGGCCACTTCTGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFIDHSQ*ATSEMP
Trigger: AGGCATTTCAGAAGTGGCTCACTGTGAGTGGTCTAT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAATCTGAGGCATTTCAATaGGGCTCAGGTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCESEAFQ*GSGGRA
Trigger: AGCCCGACCACCTGAGCCTCATTGAAATGCCTCAGA...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTRMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQRMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp ACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCAAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: TRSRRVGANEKPRHLKTSSEWSF*RMVRTL
Trigger: AAGTGTGCGGACCATCCTGCAGAACGACCACTCACT...TGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACTGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGTCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAATCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCCATGGAGCTCACTGCTaGTCTCACTTGAACATCGTA +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFHGAHC*SHLNIV
Trigger: TACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATG...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGAGTTCATCAGAGGATaGCAAAGTGACAGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTEFIRG*QSDSQN
Trigger: GTTTTGACTGTCACTTTGGCATCCTCTGATGAACTC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAACAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEQMVAE*YNWQLK
Trigger: TTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTG...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGQMVAE*YNWQLK
Trigger: TTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTG...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACCAGGCTGATGCAAAATaGTTTCTTCCTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHQADAK*FLPQMV
Trigger: TACCATCTGAGGAAGAAAGCATTTTGCATCAGCCTG...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCCATTTTGCCAACTATTaGAGCACCTCCATGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLHFANY*STSMGV
Trigger: AACACCCATGGAGGTGCTGCAATAGTTGGCAAAATG...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGCAGTGAATTCCAAATaGCAAGGAAAGAAATTGGGC +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWAVNSK*QGKKLG
Trigger: GCCCAATTTCTTTCCTTGGCATTTGGAATTCACTGC...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGAGCCTTTGTGGAGGATaGTTACACATTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLSLCGG*LHICFQ
Trigger: CTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCT...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGTCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASSRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTTCCAGGAGACCCTGGTaGGGCATGAAGTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFSRRPW*GMKFSR
Trigger: TCTGCTGAACTTCATGCCCCACCAGGGTCTCCTGGA...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EASILLRDTRLVCLGVLLGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...AAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DERDTGSLLFLPTACECDGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAATGGAAAAGCAGACACTaGTTTCTCCCATTGGATAGA +
Preference number: 4 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKWKSRH*FLPLDR
Trigger: TCTATCCAATGGGAGAAACCAGTGTCTGCTTTTCCA...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTCTGCCTCTCTGCACATaGAGCTCACTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFLPLCT*SSLLLS
Trigger: TGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAG...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCCAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVAQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACGTAGGTGAGGCGATTTaGATGAAGCATCCATACTTT +
Preference number: 4 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHVGEAI*MKHPYF
Trigger: AAAGTATGGATGCTTCATCCAAATCGCCTCACCTAC...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGCTGAGTGCTACAATTaGCAGCTTAAACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPAECYN*QLKQPN
Trigger: GTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCTGCTCTCTTCAGGAGTaGGAATTAACTTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: VLESVNLGLEPHPCHLLACSLQE*ELTFTH
Trigger: ATGAGTAAAAGTTAATTCCCACTCCTGAAGAGAGCA...GGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp TTCATCAGAGGATGCCAAAGTGACAGTCAAAACACAGAATCCTCCAGGGTCTCAGTGCAGGAGCTGAACTaGAACTCCCAACAACCAAAC +
Preference number: 4 (lower is better)
Translates to: FIRGCQSDSQNTESSRVSVQELN*NSQQPN
Trigger: GTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCAC...TGAGACCCTGGAGGATTCTGTGTTTTGACTGTCACTTTGGCATCCTCTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438560.5
CDS-3UTR CCA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCGTGCAGGAGCTGAACTaGAACTCCCAACAACCAAAC +
Preference number: 4 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVAVQELN*NSQQPN
Trigger: GTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCAC...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAATCCTTCATGATGGGATaGCAACACGTTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGESFMMG*QHVFSK
Trigger: CTTAGAGAAAACGTGTTGCCATCCCATCATGAAGGA...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGTGAGGAATTTGTaGCTCTCACTTGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHGVRNL*LSLAIE
Trigger: TTCTATAGCAAGTGAGAGCCACAAATTCCTCACCCC...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACATTGCAGCACCTCCATaGGTGTTGCCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYIAAPP*VLPSQP
Trigger: TGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAAT...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACGTAATCCCAGTACTTTaGAAGGCTGAGGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNVIPVL*KAEAGV
Trigger: TACACCGGCCTCAGCCTTCCAAAGTACTGGGATTAC...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCCAGCTCAGGGAAGTGTaGCAAGGAGCTCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFQLREV*QGAPQS
Trigger: GCTCTGTGGAGCTCCTTGCCACACTTCCCTGAGCTG...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HHARVSRDQVLESVNLGLDRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGTTTTCACTGAGGCACTaGGGCATGTGTGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQFSLRH*GMCEFI
Trigger: GATGAACTCACACATGCCTCAGTGCCTCAGTGAAAA...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCCCCTGTTCTTTTCACTaGGGCACTGAGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFPCSFH*GTEACV
Trigger: CACACATGCCTCAGTGCCTCAGTGAAAAGAACAGGG...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGATGAAAAGTCTGAGGTaGGTCAAGCAAATTGCAAAG +
Preference number: 4 (lower is better)
Translates to: MVAECYNWQLKQPNGHSQMKSLR*VKQIAK
Trigger: CTTTGCAATTTGCTTGACTCACCTCAGACTTTTCAT...CTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGTGGTTCACTCCAGGCTaGTGCAAAATGCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQWFTPG*CKMLSS
Trigger: GGAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCA...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCGCAGCGGCAGGGCATTaGGAACGAACCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFAAAGH*ERTLSL
Trigger: CAGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGC...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCACTTTGTGTTGCTCCTaGAACACATATACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFTLCCS*NTYTKG
Trigger: GCCCTTGGTATATGTGTTTCAGGAGCAACACAAAGT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCATAGACCACTCACAGTaGGCCACTTCTGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFIDHSQ*ATSEMP
Trigger: AGGCATTTCAGAAGTGGCTCACTGTGAGTGGTCTAT...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAAAGCATGTTTGTTCTaGTCCCGTGGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEKACLF*SRGCGG
Trigger: GCCTCCACAGCCACGGGATCAGAACAAACATGCTTT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCCATGCTGCACGCAGTaGATTCCAAATGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRPCCTQ*IPNAKE
Trigger: TTCCTTGGCATTTGGAATTCACTGCGTGCAGCATGG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp ACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCATGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: TRSRRVGANEKPRHLKTSCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...TGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVPGKPA*DISPQC
Trigger: ACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGG...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRPGKPA*DISPQC
Trigger: ACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFSSFNL*CDIQWR
Trigger: CCTCCACTGAATGTCACAGCAGAGATTGAAGGAACT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR GCA 90 bp ACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCAGCACATGGAGCTCACTaGTGCTCTCACTTGAACATC +
Preference number: 4 (lower is better)
Translates to: TRSRRVGANEKPRHLKTSAHGAH*CSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGC...TGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGAGCCACTTCTGAAATaGCTCTTACACAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTEPLLK*LLHSNL
Trigger: TAAATTGCTGTGTAAGAGGCATTTCAGAAGTGGCTC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGAGATTCTTCCCCAGCCTaGATGAATAGCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGDSSPA*MNSLRS
Trigger: AGACCTCAAGCTATTCATGCAGGCTGGGGAAGAATC...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEGRSAG*SAHLLK
Trigger: TTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMGRSAG*SAHLLK
Trigger: TTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACC...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAGATTTATTTGATCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEDLFDQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGATCAAATAAATC...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCATGCTGTGACATTCAGTaGAGGATTTATTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: GLEPHPCHLLAMQNRVKPCCDIQ*RIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCA...TGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAGTGGGGCAGGAAAGCTaGATGTTATCTCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: HHARVSRDQVLESVNLGLVGQES*MLSPLS
Trigger: AGATAAAGGAGATAACATCCAGCTTTCCTGCCCCAC...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCTTCTCTAAGCAAATATaGAGGAGGATTTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: TYTKGQITVPAQGSVARSFSKQI*RRICTE
Trigger: CTCTGTACAAATCCTCCTCCATATTTGCTTAGAGAA...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTTCCTTCATGATGGGATaGCAACACGTTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPSFMMG*QHVFSK
Trigger: CTTAGAGAAAACGTGTTGCCATCCCATCATGAAGGA...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCTCCTCTGCACATTTCTaGGGTCACTTTTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVASSAHF*GHFYLS
Trigger: GCTCAGGTAAAAGTGACCCCAGAAATGTGCAGAGGA...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACCACTACACTCTAGCCTaGGAGACAGAACAAGACTGT +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNHYTLA*ETEQDC
Trigger: ACAGTCTTGTTCTGTCTCCCAGGCTAGAGTGTAGTG...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGGGCACATGTGTCTCCTaGTTGCTTCTAACTAACCGC +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRGTCVS*LLLTNR
Trigger: GCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCC...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 72 bp GCAGTAGCCCAGTTGTTAGGCACATGTGTCTCCTGGTaGCTTCTAACTAACCGCATTCTCATTAGATACCCA +
Preference number: 4 (lower is better)
Translates to: AVAQLLGTCVSW*LLTNRILIRYP
Trigger: TGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCCTAACAACTGGGCTACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTTGGCCCCCAAAAGGATaGGTAATACATGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGWPPKG*VIHAPR
Trigger: TCGTGGCGCATGTATTACTCATCCTTTTGGGGGCCA...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGAGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGDRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGACAAGCCAGGTGCAGTaGAGGGAAACTTGGTATGAC +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMTSQVQ*RETWYD
Trigger: GTCATACCAAGTTTCCCTTCACTGCACCTGGCTTGT...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAACAAGCCAGGTGCAGTaGAGGGAAACTTGGTATGAC +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCETSQVQ*RETWYD
Trigger: GTCATACCAAGTTTCCCTTCACTGCACCTGGCTTGT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGTCTCTATATAACAGATaGCTTCAATTTCCGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTSLYNR*LQFPSH
Trigger: GTGAGACGGAAATTGAAGTCATCTGTTATATAGAGA...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACAGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPAGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTATGAAAAGTCTGAGGTaGGTCAAGCAAATTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPMKSLR*VKQIAK
Trigger: CTTTGCAATTTGCTTGACTCACCTCAGACTTTTCAT...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTGGTTCACTCCAGGCTaGTGCAAAATGCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRWFTPG*CKMLSS
Trigger: GGAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCA...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATCAACTGTGCAGGAGCTaGACTGGAACTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNQLCRS*TGTPNN
Trigger: GTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTG...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGGTCCCTTTCATGATTaGATTATGCTCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPGPFHD*IMLNDF
Trigger: GAAGTCATTGAGCATAATTCAATCATGAAAGGGACC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGGGGGTCACTTTTACCTaGGCCTGGTATTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMGVTFT*AWYSTP
Trigger: AGGAGTTGAATACCAGGCTCAGGTAAAAGTGACCCC...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAATCTTCCTTCAGCGGCTaGTTTTCAAATTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGESSFSG*FSNFGI
Trigger: AATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGA...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACACAGTGAGCCACTTCTaGAATGCCTCTTACACAGCA +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYTVSHF*NASYTA
Trigger: TGCTGTGTAAGAGGCATTTCAGAAGTGGCTCACTGT...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFPGKPA*DISPQC
Trigger: ACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGG...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTCATGGAGCTCACTGCTaGTCTCACTTGAACATCGTA +
Preference number: 4 (lower is better)
Translates to: SRRVGANEKPRHLKTSLAHGAHC*SHLNIV
Trigger: TACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATG...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGGCACATGGAGCTCACTaGTGCTCTCACTTGAACATC +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQAHGAH*CSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGC...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCGCACATGGAGCTCACTaGTGCTCTCACTTGAACATC +
Preference number: 4 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFAHGAH*CSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGC...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTAGAGCCCTGCCTCTCTaGACATGGAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFRALPL*TWSSLL
Trigger: CAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCT...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAGAGCCCTGCCTCTCTaGACATGGAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: FLIEKAVDREKISHNRDMRALPL*TWSSLL
Trigger: CAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCT...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACATGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTCCCAGGGCACACCTGTaGTTGGTTCCACCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSPRAHL*LVPPAV
Trigger: GACTGCAGGTGGAACCAAGCACAGGTGTGCCCTGGG...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGACATTTTGCCAACTATTaGAGCACCTCCATGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGHFANY*STSMGV
Trigger: AACACCCATGGAGGTGCTGCAATAGTTGGCAAAATG...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAGGCAGTTTCCACAATaGCAACTGTCTGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCERQFPQ*QLSGLW
Trigger: CCACAACCCAGACAGTTGGCATTGTGGAAACTGCCT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCCAAAAACATCCAGGTTaGAGTAGCCCAGTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFQKHPG*SSPVVR
Trigger: CCTAACAACTGGGCTACTGCAACCTGGATGTTTTTG...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCGCAGTGAATTCCAAATaGCAAGGAAAGAAATTGGGC +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSAVNSK*QGKKLG
Trigger: GCCCAATTTCTTTCCTTGGCATTTGGAATTCACTGC...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTCAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATTCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTGGAAAAGCAGACACTaGTTTCTCCCATTGGATAGA +
Preference number: 4 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTWKSRH*FLPLDR
Trigger: TCTATCCAATGGGAGAAACCAGTGTCTGCTTTTCCA...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGAGAAGTAAATACAGCTaGACGTTAGCCTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWRSKYS*TLALKA
Trigger: AGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCT...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAGAAGTAAATACAGCTaGACGTTAGCCTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGRSKYS*TLALKA
Trigger: AGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCT...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGGCTGAGTGCTACAATTaGCAGCTTAAACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQAECYN*QLKQPN
Trigger: GTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGC...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGTGCTCTCTTCAGGAGTaGGAATTAACTTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWCSLQE*ELTFTH
Trigger: ATGAGTAAAAGTTAATTCCCACTCCTGAAGAGAGCA...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGATCAAATGATGTATCCTaGATCAGGCCTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGSNDVS*IRPLEL
Trigger: AAGCTCCAGAGGCCTGATCCAGGATACATCATTTGA...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGAAAGAGTGTGCCAGGTaGGGATTCTGGGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASKECAR*GFWALL
Trigger: TAACAGTGCCCAGAATCCCCACCTGGCACACTCTTT...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRRVGANEKPRHLKTSLADRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR TCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDREDRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTCACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATACAAGCCAGGTGCAGTaGAGGGAAACTTGGTATGAC +
Preference number: 4 (lower is better)
Translates to: DERDTGSLLFLPTACECDTSQVQ*RETWYD
Trigger: GTCATACCAAGTTTCCCTTCACTGCACCTGGCTTGT...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR TCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTTCCTCAGATGGTAGCTaGGTGCTACAATTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EASILLRDTRLVCLGVLLSSDGS*VLQLAA
Trigger: AGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGA...AAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTATACATGCGCCACGATaGTCATATCCTGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVIHAPR*SYPVYR
Trigger: TCTGTAGACAGGATATGATCATCGTGGCGCATGTAT...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGATACATGCGCCACGATaGTCATATCCTGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDREIHAPR*SYPVYR
Trigger: TCTGTAGACAGGATATGATCATCGTGGCGCATGTAT...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456302.5
CDS-3UTR TCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGTTAGTTGGTTTCAAATaGTGTATCCTGGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQLVGFK*CILDQA
Trigger: GGCCTGATCCAGGATACATCATTTGAAACCAACTAA...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGACATTATTGTAGGCCTTaGGGATCTCTGCCAAATACT +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGHYCRP*GSLPNT
Trigger: AGTATTTGGCAGAGATCCTCAAGGCCTACAATAATG...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTACCAGCAGATGGTCCTaGCACATAGAAGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: EASILLRDTRLVCLGVLLTSRWS*HIEVSP
Trigger: TGGTGAGACTTCTATGTGTCAGGACCATCTGCTGGT...AAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTAAATCTATTCCTGATTaGAAAGGCAGTAGACCGAGA +
Preference number: 4 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTKSIPD*KGSRPR
Trigger: TCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTT...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGAAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGRMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATTGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTTGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp ACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCAAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRSRRVGANEKPRHLKTSSSFNL*CDIQWR
Trigger: CCTCCACTGAATGTCACAGCAGAGATTGAAGGAACT...TGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRESSFNL*CDIQWR
Trigger: CCTCCACTGAATGTCACAGCAGAGATTGAAGGAACT...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAACATGGAGCTCACTGCTaGTCTCACTTGAACATCGTA +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEHGAHC*SHLNIV
Trigger: TACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATG...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGATGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACCTTTCAGAGTTGGTTTaGTCTCTTCAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYLSELV*SLQEWE
Trigger: TTCCCACTCCTGAAGAGAGCAAACCAACTCTGAAAG...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTGAAATGCGGTGGCCATaGGATGAGAAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFEMRWP*DEKQRQ
Trigger: CTGCCGCTGCTTCTCATCGCATGGCCACCGCATTTC...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456302.5
CDS-3UTR GCA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGTAATCTGCTATCCCTaGTGTTGTTTTTATTTCAGA +
Preference number: 4 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLVICYP*CCFYFR
Trigger: TCTGAAATAAAAACAACAGCAGGGATAGCAGATTAC...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp AAAACACATGTAATCTGCTATCCCTGCTGTTGTTTTTATTTCAGATACGGTGTGTTAGAGCCCCATCCCTaGCACTTGTTGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: KTHVICYPCCCFYFRYGVLEPHP*HLLAMQ
Trigger: CTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAA...CACACCGTATCTGAAATAAAAACAACAGCAGGGATAGCAGATTACATGTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTTTCAACTCCTCACTATaGCATTTCCTATCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPFNSSL*HFLSTS
Trigger: AGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGAA...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGGATTCTTCCCCAGCCTaGATGAATAGCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQDSSPA*MNSLRS
Trigger: AGACCTCAAGCTATTCATGCAGGCTGGGGAAGAATC...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFLASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTCAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFQKPSC*PVVSGR
Trigger: ACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTGGTTCCAGGAGACCCTaGTGGGGCATGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSGSRRP*WGMKFS
Trigger: GCTGAACTTCATGCCCCACCAGGGTCTCCTGGAACC...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCTCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACATTTTGGTGCTGGAATTaGTGGAAACAACTTGATCCA +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATFWCWN*WKQLDP
Trigger: TGGATCAAGTTGTTTCCACCAATTCCAGCACCAAAA...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGATTACTTTTTGGTGCTaGAATTGGTGGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTITFWC*NWWKQL
Trigger: AAGTTGTTTCCACCAATTCCAGCACCAAAAAGTAAT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAACAAGACTGGTGTGTCTaGGTGTATTGCTTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQQDWCV*VYCFAG
Trigger: ACCTGCGAAGCAATACACCCAGACACACCAGTCTTG...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGGCAAATTGCAAAGATTaGCAGGTGAGGAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASANCKD*QVRRCY
Trigger: GTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGC...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCAGAAGTAAATACAGCTaGACGTTAGCCTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLRSKYS*TLALKA
Trigger: AGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCT...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACTCCTTCATGATGGGATaGCAACACGTTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNSFMMG*QHVFSK
Trigger: CTTAGAGAAAACGTGTTGCCATCCCATCATGAAGGA...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTTCAAATGATGTATCCTaGATCAGGCCTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVSNDVS*IRPLEL
Trigger: AAGCTCCAGAGGCCTGATCCAGGATACATCATTTGA...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGACAAATACAGTTTCCTaGCCAGGAATGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQTNTVS*PGMVVH
Trigger: ATGAACCACCATTCCTGGCCAGGAAACTGTATTTGT...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCCACCAAGGAGGCCAATaGGCTACTTTGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SHLPSAADFQILVFIRLSHQGGQ*ATLCCS
Trigger: GGAGCAACACAAAGTAGCCCATTGGCCTCCTTGGTG...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGGCACATGTGTCTCCTaGTTGCTTCTAACTAACCGC +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNGTCVS*LLLTNR
Trigger: GCGGTTAGTTAGAAGCAACCAGGAGACACATGTGCC...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGATACATGCGCCACGATaGTCATATCCTTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQIHAPR*SYPFSL
Trigger: TAGTGAAAAAGGATATGATCATCGTGGCGCATGTAT...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256452.7
ENST00000418488.6
CDS-3UTR TCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTTGGCCCCCAAAAGGATaGGTAATACATGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFWPPKG*VIHAPR
Trigger: TCGTGGCGCATGTATTACTCATCCTTTTGGGGGCCA...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: FLIEKAVDREKISHNRDMGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGCTTCAATCTCTGCTGTaGCATTCAGTGGAGGATTTA +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRELQSLL*HSVEDL
Trigger: TAAATCCTCCACTGAATGTCACAGCAGAGATTGAAG...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAGGCAAAATGCTTGGATaGGTCAACTTCCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQGKMLG*VNFPAV
Trigger: TACAGCAGGGAAGTTGACTCATCCAAGCATTTTGCC...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTTGGTTCACTCCAGGCTaGTGCAAAATGCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EASILLRDTRLVCLGVLLWFTPG*CKMLSS
Trigger: GGAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCA...AAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCGGTCCCTTTCATGATTaGATTATGCTCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFGPFHD*IMLNDF
Trigger: GAAGTCATTGAGCATAATTCAATCATGAAAGGGACC...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCGTATATTGGGATATTTaGTGGAATGGCCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFVYWDI*WNGLVE
Trigger: TTCTACAAGGCCATTCCATCAAATATCCCAATATAC...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGTTGAGGAAAACTGGATaGAAGAGACACAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRELRKTG*KRHRIS
Trigger: AGAGATCCTGTGTCTCTTTCATCCAGTTTTCCTCAA...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDRERMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVRMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: FLIEKAVDREKISHNRDMSEWSF*RMVRTL
Trigger: AAGTGTGCGGACCATCCTGCAGAACGACCACTCACT...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp ACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCATCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: TRSRRVGANEKPRHLKTSSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...TGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGAGTTCATCAGAGGATaGCAAAGTGACAGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVEFIRG*QSDSQN
Trigger: GTTTTGACTGTCACTTTGGCATCCTCTGATGAACTC...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRQMVAE*YNWQLK
Trigger: TTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCAGGCTGATGCAAAATaGTTTCTTCCTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRQADAK*FLPQMV
Trigger: TACCATCTGAGGAAGAAAGCATTTTGCATCAGCCTG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGTCCCAACAACCAAACTaGTGTCAAACGAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQSQQPN*CQTKES
Trigger: AGATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGA...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTTTCATGATTGAATTATaGTCAATGACTTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPFMIEL*SMTSSA
Trigger: TGCTGAGGAAGTCATTGAGCATAATTCAATCATGAA...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACGGCCTCCAATCTGGATaGAGACTCATATATGAAGAT +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYGLQSG*RLIYED
Trigger: ATCTTCATATATGAGTCTGCATCCAGATTGGAGGCC...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCTTCAACTCCTCACTATaGCATTTCCTATCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSFNSSL*HFLSTS
Trigger: AGAAGTTGATAGGAAATGGCATAGTGAGGAGTTGAA...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCAGGCAGTTTCCACAATaGCAACTGTCTGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SHLPSAADFQILVFIRLSRQFPQ*QLSGLW
Trigger: CCACAACCCAGACAGTTGGCATTGTGGAAACTGCCT...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCAAGCCTTTGTGGAGGATaGTTACACATTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TRSRRVGANEKPRHLKTSSLCGG*LHICFQ
Trigger: CTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCT...TGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKLASSE*SFCRMV
Trigger: GACCATCCTGCAGAACGACCACTCACTACTGGCCAG...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGATCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATTGCTGTGACATTCAGTaGAGGATTTATTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHCCDIQ*RIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCA...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACTTTTGGTGCTGGAATTaGTGGAAACAACTTGATCCA +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNFWCWN*WKQLDP
Trigger: TGGATCAAGTTGTTTCCACCAATTCCAGCACCAAAA...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATATTACTTTTTGGTGCTaGAATTGGTGGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHITFWC*NWWKQL
Trigger: AAGTTGTTTCCACCAATTCCAGCACCAAAAAGTAAT...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGCTGAGTGCTACAATTaGCAGCTTAAACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEAECYN*QLKQPN
Trigger: GTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTATTCTCTAAGCAAATATaGAGGAGGATTTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: HHARVSRDQVLESVNLGLFSKQI*RRICTE
Trigger: CTCTGTACAAATCCTCCTCCATATTTGCTTAGAGAA...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACCACTACACTCTAGCCTaGGAGACAGAACAAGACTGT +
Preference number: 4 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHHYTLA*ETEQDC
Trigger: ACAGTCTTGTTCTGTCTCCCAGGCTAGAGTGTAGTG...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTACAAATACAGTTTCCTaGCCAGGAATGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVTNTVS*PGMVVH
Trigger: ATGAACCACCATTCCTGGCCAGGAAACTGTATTTGT...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTGCTAAAAATCCCTATTaGAACGGATATCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LQKAFKECARWGFWALLPAKNPY*NGYLGK
Trigger: TTTTCCAAGATATCCGTTCCAATAGGGATTTTTAGC...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACGCCAAGGAAAGAAATTaGGCTAAAAATCCCTATTGG +
Preference number: 4 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNAKERN*AKNPYW
Trigger: CCAATAGGGATTTTTAGCCCAATTTCTTTCCTTGGC...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
3UTR CAA 72 bp GAAATTGGGCTAAAAATCCCTATTGGAACGGATATCTaGGAAAAGCATGTTTGTTCTGATCCCGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EIGLKIPIGTDI*EKHVCSDPVAV
Trigger: CACAGCCACGGGATCAGAACAAACATGCTTTTCCAAGATATCCGTTCCAATAGGGATTTTTAGCCCAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGATACATGCGCCACGATaGTCATATCCTTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRIHAPR*SYPFSL
Trigger: TAGTGAAAAAGGATATGATCATCGTGGCGCATGTAT...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256452.7
ENST00000418488.6
CDS-3UTR TCA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTATACATGCGCCACGATaGTCATATCCTTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: SRRVGANEKPRHLKTSLAIHAPR*SYPFSL
Trigger: TAGTGAAAAAGGATATGATCATCGTGGCGCATGTAT...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR TCA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAGACAGGTGGGAGAAGTaGAATCTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQDRWEK*NLFIRK
Trigger: CTTCCTGATGAAAAGATTTCACTTCTCCCACCTGTC...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAAGGTCCGCACACTTGCTaGAAAGCCTTTGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKGPHTC*KAFVED
Trigger: ATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACC...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTACAAGCCAGGTGCAGTaGAGGGAAACTTGGTATGAC +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFTSQVQ*RETWYD
Trigger: GTCATACCAAGTTTCCCTTCACTGCACCTGGCTTGT...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCTTCAATCTCTGCTGTaGCATTCAGTGGAGGATTTA +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQLQSLL*HSVEDL
Trigger: TAAATCCTCCACTGAATGTCACAGCAGAGATTGAAG...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAGTGTTGCCTAAATTCTaGACACCTCTTAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQVLPKF*TPLSQE
Trigger: CTCTTGGCTAAGAGGTGTTCAGAATTTAGGCAACAC...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTATGAAAAGTCTGAGGTaGGTCAAGCAAATTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVMKSLR*VKQIAK
Trigger: CTTTGCAATTTGCTTGACTCACCTCAGACTTTTCAT...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCATTATTGTAGGCCTTaGGGATCTCTGCCAAATACT +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQHYCRP*GSLPNT
Trigger: AGTATTTGGCAGAGATCCTCAAGGCCTACAATAATG...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTAGGAAGGAATGGTTTTaGAAAAATTTGCACCCTGGT +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPARKEWF*KNLHPG
Trigger: ACCAGGGTGCAAATTTTTTCAAAACCATTCCTTCCT...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGTGCCAACAAGCCAGGTaGAGTGAAGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: FLIEKAVDREKISHNRDMCQQAR*SEGKLG
Trigger: ACCAAGTTTCCCTTCACTGCACCTGGCTTGTTGGCA...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGTCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTGGCCTGATAGCAGAGTaGTTGCTGGAGCCGTTAACA +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFGLIAE*LLEPLT
Trigger: TGTTAACGGCTCCAGCAAGCACTCTGCTATCAGGCC...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTGCACATGGAGCTCACTaGTGCTCTCACTTGAACATC +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFAHGAH*CSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGC...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGTGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCAGGCTGATGCAAAATaGTTTCTTCCTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQQADAK*FLPQMV
Trigger: TACCATCTGAGGAAGAAAGCATTTTGCATCAGCCTG...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTCTTTCAGAGTTGGTTTaGTCTCTTCAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVLSELV*SLQEWE
Trigger: TTCCCACTCCTGAAGAGAGCAAACCAACTCTGAAAG...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTTCCCAACAACCAAACTaGTGTCAAACGAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPASQQPN*CQTKES
Trigger: AGATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGA...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAAAAACACATGTAATCTaGTATCCCTGCTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HHARVSRDQVLESVNLGLKTHVI*YPCCCF
Trigger: AAAACAACAGCAGGGATAGCAGATTACATGTGTTTT...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACATTCATGATTGAATTATaGTCAATGACTTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KHFANYCSTSMGVAFSATFMIEL*SMTSSA
Trigger: TGCTGAGGAAGTCATTGAGCATAATTCAATCATGAA...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGGGCCTCCAATCTGGATaGAGACTCATATATGAAGAT +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASGLQSG*RLIYED
Trigger: ATCTTCATATATGAGTCTGCATCCAGATTGGAGGCC...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CCCACCACAAAGGCCTCCAATCTGGATGCAGACTCATATATGAAGATGTTAGGACTGAACCTTAGTAACTaGAACTATAAAATGGGACAG +
Preference number: 4 (lower is better)
Translates to: PTTKASNLDADSYMKMLGLNLSN*NYKMGQ
Trigger: CTGTCCCATTTTATAGTTGCAGTTACTAAGGTTCAG...TCCTAACATCTTCATATATGAGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTAACCTATATACAAGGTaGCGTATCAGGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVNLYTR*RIRADR
Trigger: TCTGTCAGCCCTGATACGGCACCTTGTATATAGGTT...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGTCAAACTCTTTGACTTaGTATGACAAGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMSNSLT*YDKAGE
Trigger: CTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGA...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAGCCTTTGTGGAGGATaGTTACACATTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCESLCGG*LHICFQ
Trigger: CTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAAGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKGRSAG*SAHLLK
Trigger: TTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACC...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFGRSAG*SAHLLK
Trigger: TTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACC...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGATTTATTTGATCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVDLFDQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGATCAAATAAATC...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGGATTTATTTGATCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDREDLFDQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGATCAAATAAATC...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGTGGAAAAGCAGACACTaGTTTCTCCCATTGGATAGA +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQWKSRH*FLPLDR
Trigger: TCTATCCAATGGGAGAAACCAGTGTCTGCTTTTCCA...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCACATGGCAAAATGCTTaGATGAGTCAACTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFTWQNA*MSQLPC
Trigger: GCAGGGAAGTTGACTCATCCAAGCATTTTGCCATGT...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGCTGAGTGCTACAATTaGCAGCTTAAACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGAECYN*QLKQPN
Trigger: GTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGC...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCTGCTCTCTTCAGGAGTaGGAATTAACTTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVACSLQE*ELTFTH
Trigger: ATGAGTAAAAGTTAATTCCCACTCCTGAAGAGAGCA...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TGGTTGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCCTCCCCCTGTTCGTCTCTTTTGATATaGGGTGATATATTAGCTCTA +
Preference number: 4 (lower is better)
Translates to: WLLLTNRILIRYPASSPCSSLLI*GDILAL
Trigger: TAGAGCTAATATATCACCCCATATCAAAAGAGACGA...ACAGGGGGAGGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCTTGGAACGGATATCTTaGAAAAGCATGTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFLERIS*KSMFVL
Trigger: CAGAACAAACATGCTTTTCCAAGATATCCGTTCCAA...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTACAAGCCAGGTGCAGTaGAGGGAAACTTGGTATGAC +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFTSQVQ*RETWYD
Trigger: GTCATACCAAGTTTCCCTTCACTGCACCTGGCTTGT...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATCTTCAATCTCTGCTGTaGCATTCAGTGGAGGATTTA +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNLQSLL*HSVEDL
Trigger: TAAATCCTCCACTGAATGTCACAGCAGAGATTGAAG...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATCTTCAATCTCTGCTGTaGCATTCAGTGGAGGATTTA +
Preference number: 4 (lower is better)
Translates to: DERDTGSLLFLPTACECDLQSLL*HSVEDL
Trigger: TAAATCCTCCACTGAATGTCACAGCAGAGATTGAAG...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGTGAGGCGATTTGGATaGAGCATCCATACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNVRRFG*SIHTFK
Trigger: CTTAAAAGTATGGATGCTTCATCCAAATCGCCTCAC...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCACATCAACCTGCTGCTaGTGGTGTTTACTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFTSTCC*WCLLLS
Trigger: ACTTAACAGTAAACACCATCAGCAGCAGGTTGATGT...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGGTCACAATAGAGATATaGAACCATTTTAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: FTGFMANLFLIEKAVDREVTIEI*NHFKTH
Trigger: GTGGGTCTTAAAATGGTTTCATATCTCTATTGTGAC...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTAAATCTATTCCTGATTaGAAAGGCAGTAGACCGAGA +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFKSIPD*KGSRPR
Trigger: TCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTT...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAAGCACATGGAGCTCACTaGTGCTCTCACTTGAACATC +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKAHGAH*CSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGC...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATTGTGTCTGGGTGTATTaGTTCGCAGGTAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNCVWVY*FAGKLS
Trigger: ACTCAATTTACCTGCGAAGCAATACACCCAGACACA...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp TTCTGTGCCTATTACCCAGGGTTCAACCCTCTGCTAGTTACAGTGGATAATTACAAAAACATGGCAAAATaGTTGGATGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: FCAYYPGFNPLLVTVDNYKNMAK*LDESTS
Trigger: GGAAGTTGACTCATCCAAGCATTTTGCCATGTTTTT...GTAATTATCCACTGTAACTAGCAGAGGGTTGAACCCTGGGTAATAGGCACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATCAGATGGTAGCTGAGTaGTACAATTGGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNQMVAE*YNWQLK
Trigger: TTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTG...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTTTTGTGGCTCTCACTTaGTATAGAAAAGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVFVALT*YRKDSL
Trigger: AAGACTGTCTTTTCTATAGCAAGTGAGAGCCACAAA...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGAGCCACTTCTGAAATaGCTCTTACACAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEEPLLK*LLHSNL
Trigger: TAAATTGCTGTGTAAGAGGCATTTCAGAAGTGGCTC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTAGCCTTTGTGGAGGATaGTTACACATTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGSLCGG*LHICFQ
Trigger: CTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCT...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTTCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAGATTTATTTGATCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEDLFDQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGATCAAATAAATC...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCTTTTGGTGCTGGAATTaGTGGAAACAACTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFFWCWN*WKQLDP
Trigger: TGGATCAAGTTGTTTCCACCAATTCCAGCACCAAAA...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTGTAGGTGAGGCGATTTaGATGAAGCATCCATACTTT +
Preference number: 4 (lower is better)
Translates to: EASILLRDTRLVCLGVLLVGEAI*MKHPYF
Trigger: AAAGTATGGATGCTTCATCCAAATCGCCTCACCTAC...AAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTAGAAGTAAATACAGCTaGACGTTAGCCTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVRSKYS*TLALKA
Trigger: AGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCT...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTGTGCAGGAGCTGAACTaGAACTCCCAACAACCAAAC +
Preference number: 4 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSVQELN*NSQQPN
Trigger: GTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCAC...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAGACTAGGATTGATCTaGCATTACTTGACCAACAAG +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCERLGLI*HYLTNK
Trigger: CTTGTTGGTCAAGTAATGCCAGATCAATCCTAGTCT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTGGATATTTGATGGAATaGCCTTGTAGAAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPAGYLME*PCRNFS
Trigger: GGAAAAGTTTCTACAAGGCCATTCCATCAAATATCC...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTCAACTGTCTGGGTTGTaGTTTGAAAGAGATCAGACA +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGQLSGL*FERDQT
Trigger: TGTCTGATCTCTTTCAAACCACAACCCAGACAGTTG...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCGCTAAAAATCCCTATTaGAACGGATATCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFAKNPY*NGYLGK
Trigger: TTTTCCAAGATATCCGTTCCAATAGGGATTTTTAGC...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAACAATTTCCGTCTCACTaGACCCAGCTTTATTTTACA +
Preference number: 4 (lower is better)
Translates to: TARSKYSWTLALKAVCCEQFPSH*TQLYFT
Trigger: TGTAAAATAAAGCTGGGTCCAGTGAGACGGAAATTG...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438560.5
CDS-3UTR TCA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCTTGAATTATGCTCAATaGCTTCCTCAGCACATTTCC +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFLNYAQ*LPQHIS
Trigger: GGAAATGTGCTGAGGAAGTCATTGAGCATAATTCAA...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGGTATATTGGGATATTTaGTGGAATGGCCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQVYWDI*WNGLVE
Trigger: TTCTACAAGGCCATTCCATCAAATATCCCAATATAC...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCACATCAACCTGCTGCTaGTGGTGTTTACTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SHLPSAADFQILVFIRLSTSTCC*WCLLLS
Trigger: ACTTAACAGTAAACACCATCAGCAGCAGGTTGATGT...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTAGGAAGGAATGGTTTTaGAAAAATTTGCACCCTGGT +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGRKEWF*KNLHPG
Trigger: ACCAGGGTGCAAATTTTTTCAAAACCATTCCTTCCT...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTGTCACAATAGAGATATaGAACCATTTTAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFVTIEI*NHFKTH
Trigger: GTGGGTCTTAAAATGGTTTCATATCTCTATTGTGAC...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATGTAAGATGTTACCCTTaGGGAAAACTGGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: DERDTGSLLFLPTACECDVRCYP*GKLDER
Trigger: TCTTTCATCCAGTTTTCCTCAAGGGTAACATCTTAC...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTCATGGAGCTCACTGCTaGTCTCACTTGAACATCGTA +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFHGAHC*SHLNIV
Trigger: TACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATG...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCGAGTTCATCAGAGGATaGCAAAGTGACAGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SHLPSAADFQILVFIRLSEFIRG*QSDSQN
Trigger: GTTTTGACTGTCACTTTGGCATCCTCTGATGAACTC...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGAAAAACATGGCAAAATaGTTGGATGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASKNMAK*LDESTS
Trigger: GGAAGTTGACTCATCCAAGCATTTTGCCATGTTTTT...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGAAAAACATGGCAAAATaGTTGGATGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQKNMAK*LDESTS
Trigger: GGAAGTTGACTCATCCAAGCATTTTGCCATGTTTTT...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCAGCCTTTGTGGAGGATaGTTACACATTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SHLPSAADFQILVFIRLSSLCGG*LHICFQ
Trigger: CTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCT...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GAGATGGCAAGAGATGGGAGCCAATATCATGACTTTACCTTACATCAACCTGCTTGCTGTGACATTCAGTaGAGGATTTATTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: EMARDGSQYHDFTLHQPACCDIQ*RIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCA...AGCAGGTTGATGTAAGGTAAAGTCATGATATTGGCTCCCATCTCTTGCCATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGTTCTCTAAGCAAATATaGAGGAGGATTTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASFSKQI*RRICTE
Trigger: CTCTGTACAAATCCTCCTCCATATTTGCTTAGAGAA...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGTTCTCTAAGCAAATATaGAGGAGGATTTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQFSKQI*RRICTE
Trigger: CTCTGTACAAATCCTCCTCCATATTTGCTTAGAGAA...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTAGACTAGGATTGATCTaGCATTACTTGACCAACAAG +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGRLGLI*HYLTNK
Trigger: CTTGTTGGTCAAGTAATGCCAGATCAATCCTAGTCT...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGCCAAGGAAAGAAATTaGGCTAAAAATCCCTATTGG +
Preference number: 4 (lower is better)
Translates to: DLDEASILLRDTRLVCLGAKERN*AKNPYW
Trigger: CCAATAGGGATTTTTAGCCCAATTTCTTTCCTTGGC...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATCACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTCTTCAATCTCTGCTGTaGCATTCAGTGGAGGATTTA +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFLQSLL*HSVEDL
Trigger: TAAATCCTCCACTGAATGTCACAGCAGAGATTGAAG...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR TCA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAATCTCTATATAACAGATaGCTTCAATTTCCGTCTCAC +
Preference number: 4 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQSLYNR*LQFPSH
Trigger: GTGAGACGGAAATTGAAGTCATCTGTTATATAGAGA...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR TCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCTCTTCCTTCAGCGGCTaGTTTTCAAATTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFSSFSG*FSNFGI
Trigger: AATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGA...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTACTTTGTGTTGCTCCTaGAACACATATACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSTLCCS*NTYTKG
Trigger: GCCCTTGGTATATGTGTTTCAGGAGCAACACAAAGT...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTTCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCAAAAACATGGCAAAATaGTTGGATGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFKNMAK*LDESTS
Trigger: GGAAGTTGACTCATCCAAGCATTTTGCCATGTTTTT...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCCTGAACCTTAGTAACTaGAACTATAAAATGGGACAG +
Preference number: 4 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFLNLSN*NYKMGQ
Trigger: CTGTCCCATTTTATAGTTGCAGTTACTAAGGTTCAG...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp TGGATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGGATCACAAGGAAGGCTaGCAATGTAAAATAAACATA +
Preference number: 4 (lower is better)
Translates to: WMKETQDLYYFFPQLVSVDHKEG*QCKINI
Trigger: TATGTTTATTTTACATTGGCAGCCTTCCTTGTGATC...CACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR GCA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTGATCACAAGGAAGGCTaGCAATGTAAAATAAACATA +
Preference number: 4 (lower is better)
Translates to: ETILRPTSERVRFWDYLFDHKEG*QCKINI
Trigger: TATGTTTATTTTACATTGGCAGCCTTCCTTGTGATC...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp AAAACACATGTAATCTGCTATCCCTGCTGTTGTTTTTATTTCAGATACGGTGTGGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: KTHVICYPCCCFYFRYGVAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...CACACCGTATCTGAAATAAAAACAACAGCAGGGATAGCAGATTACATGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGGCTGAAAAGCCTTTGTaGAGGATGGTTACACATTTG +
Preference number: 4 (lower is better)
Translates to: FLIEKAVDREKISHNRDMAEKPL*RMVTHL
Trigger: CAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGC...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GTTACCCTTGAGGAAAACTGGATGAAAGAGACACAGGATCTCTATTATTTCTTCGATTTATTTGATCAATaGCGTGAAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: VTLEENWMKETQDLYYFFDLFDQ*REGQTA
Trigger: AGCTGTTTGCCCTTCACGCCATTGATCAAATAAATC...GAAGAAATAATAGAGATCCTGTGTCTCTTTCATCCAGTTTTCCTCAAGGGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGTGCTGTGACATTCAGTaGAGGATTTATTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASCCDIQ*RIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCA...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CCA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATTGCTCTCTTCAGGAGTaGGAATTAACTTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNCSLQE*ELTFTH
Trigger: ATGAGTAAAAGTTAATTCCCACTCCTGAAGAGAGCA...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR GCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTAGGATGAGTAATACATaGGCCACGATGATCATATCC +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFRMSNT*ATMIIS
Trigger: GGATATGATCATCGTGGCGCATGTATTACTCATCCT...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTTCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR GCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAATCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKSPVCL*CILGIL
Trigger: AAGAATGCCAAGAATACAGCAAAGACACACTGGGGA...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR GCA 90 bp AAAACACATGTAATCTGCTATCCCTGCTGTTGTTTTTATTTCAGATACGGTGTGTCCCAACAACCAAACTaGTGTCAAACGAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: KTHVICYPCCCFYFRYGVSQQPN*CQTKES
Trigger: AGATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGA...CACACCGTATCTGAAATAAAAACAACAGCAGGGATAGCAGATTACATGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR GCA 90 bp GAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTATTACTATAAGACAGTaGAGGCTTGTCAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: EASILLRDTRLVCLGVLLITIRQ*RLVKIQ
Trigger: TTGAATCTTGACAAGCCTGCACTGTCTTATAGTAAT...AAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CCA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTTCTTTGCTGTATTCTTaGCATTCTTCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFSLLYS*HSSVQE
Trigger: CTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGA...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CCA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATTGCTGTGACATTCAGTaGAGGATTTATTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: DERDTGSLLFLPTACECDCCDIQ*RIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCA...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTTGGAAAAGCAGACACTaGTTTCTCCCATTGGATAGA +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFWKSRH*FLPLDR
Trigger: TCTATCCAATGGGAGAAACCAGTGTCTGCTTTTCCA...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAATTACTTTTTGGTGCTaGAATTGGTGGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQITFWC*NWWKQL
Trigger: AAGTTGTTTCCACCAATTCCAGCACCAAAAAGTAAT...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000446632.7
CDS-3UTR TCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTCACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR TCA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: LIEKAVDREKISHNRDMKHICFQ*FWFHSH
Trigger: ATGACTATGAAACCAGAATCACTGAAAGCAAATGTG...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CCA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTTGCTGTGACATTCAGTaGAGGATTTATTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: EKAVDREKISHNRDMKPFCCDIQ*RIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCA...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS GCA 90 bp AGCGTCAGGCACAGGACCAATGCTCAATGTGCCTGGCCTGAGAAATaGGGTGGCCATGCGATGAGAAGCAGCGGCAGGGCATTGAGAACG +
Preference number: 5 (lower is better)
Translates to: SVRHRTNAQCAWPEK*GGHAMRSSGRALRT
Trigger: CGTTCTCAATGCCCTGCCGCTGCTTCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGCACATTGAGCATTGGTCCTGTGCCTGACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTAGGCCGGTGTATCGCTaGAGCCCAGGAGTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPRPVYR*SPGVRD
Trigger: ATCTCGAACTCCTGGGCTCAAGCGATACACCGGCCT...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS GCA 90 bp AGTTCAGCAGAAGCCCAGCTGCTGGCCAGTAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTTGCTGAAAAGCCTTTGTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SSAEAQLLASSEWSF*RMVRTLAEKPLWRM
Trigger: CATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTGCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 90 bp CAGAAGCCCAGCTGCTGGCCAGTAGTGAGTGGTCGTTCTGCAGGATaGTCCGCACACTTGCTGAAAAGCCTTTGTGGAGGATGGTTACAC +
Preference number: 5 (lower is better)
Translates to: QKPSCWPVVSGRSAG*SAHLLKSLCGGWLH
Trigger: GTGTAACCATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS-3UTR CAA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGCACTCTCTTTCAGAGTaGGTTTGCTCTCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: APHQALKSWPHLWRGSSLHSLSE*VCSLQE
Trigger: CTCCTGAAGAGAGCAAACCAACTCTGAAAGAGAGTG...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAAGGGCACACCTGTGCTaGGTTCCACCTGCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQRAHLC*VPPAVH
Trigger: GTGGACTGCAGGTGGAACCAAGCACAGGTGTGCCCT...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGCACCTCCATGGGTGTaGCCTTCTCAGCCACACCCC +
Preference number: 5 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPAPPWV*PSQPHP
Trigger: GGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGC...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GGCTCAGGTGGTCGGGCTGTTGGCAAATGTGACCTTCACCCTCCAGTCTCCCCAACATTTTGCCAACTATaGCAGCACCTCCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: GSGGRAVGKCDLHPPVSPTFCQL*QHLHGC
Trigger: ACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGT...TGGGGAGACTGGAGGGTGAAGGTCACATTTGCCAACAGCCCGACCACCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp ACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGAAGTGTGGCAAGGAGCCAGGTGGTCGGGCTGTaGGCAAATGTGACCTTCACC +
Preference number: 5 (lower is better)
Translates to: TYTKGQITVPAQGSVARSQVVGL*ANVTFT
Trigger: GGTGAAGGTCACATTTGCCAACAGCCCGACCACCTG...GCTCCTTGCCACACTTCCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS CCA 90 bp TGTCTACAGACGATCCTCTTGTTCCGACCAGTACTCAACAGAAGATaGCGAGGACCGTGTCTGTCGTGTCTATGCTCGTGGCTGCAACCC +
Preference number: 5 (lower is better)
Translates to: CLQTILLFRPVLNRR*RGPCLSCLCSWLQP
Trigger: GGGTTGCAGCCACGAGCATAGACACGACAGACACGGTCCTCGCCATCTTCTGTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS-3UTR CAA 90 bp CTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: LGLEPHPCHLLAMQNRVKLIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...CTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGAATATGGAGGAGGATTaGTACAGAGCAACTGTGCAG +
Preference number: 5 (lower is better)
Translates to: APHQALKSWPHLWRGSSLNMEED*YRATVQ
Trigger: CTGCACAGTTGCTCTGTACAAATCCTCCTCCATATT...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCAAGCAGCGGCAGGGCATaGAGAACGAACCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: GLEPHPCHLLAMQNRVKPSSGRA*RTNLIS
Trigger: AGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGCT...TGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTAAGAGCTGGCCACATTaGTGGAGGGGGAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPKSWPH*WRGSSL
Trigger: CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTT...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCTACAGACGATCCTCTaGTTCCGACCAGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: LGLEPHPCHLLAMQNRVKLQTIL*FRPVLN
Trigger: GTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAG...CTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTCTAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTAGCAAATTGCAAAGATaGGCAGGTGAGGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTSKLQR*AGEEVL
Trigger: TAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCT...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS GCA 90 bp CTACTTACCCACATAAATAGGTTGGCTCCACTCACTCCAGAGCCCTaGCTCTCTGCACATGGAGCTCACTGCTGCTCTCACTTGAACATC +
Preference number: 5 (lower is better)
Translates to: LLTHINRLAPLTPEP*LSAHGAHCCSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGTAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp GCACCACACCAAGCACTGAAGAGCTGGCCACATTTGTGGAGGGGGAGCTCCCTGAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: APHQALKSWPHLWRGSSLNIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTTCAGTGCTTGGTGTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCCACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: SHHARVSRDQVLESVNLGGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...CCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTGGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHSQSRP*LRIKVL
Trigger: CAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCT...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTSQSRP*LRIKVL
Trigger: CAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCT...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GTGTTGCTCCTGAAACACATATACCAAGGGCCAGATAACGGTACCAGCTCAGGGCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: VLLLKHIYQGPDNGTSSGLIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...CCCTGAGCTGGTACCGTTATCTGGCCCTTGGTATATGTGTTTCAGGAGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCCACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGCCCCACATAAATAGGTaGGCTCCACTCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SHHARVSRDQVLESVNLGPHINR*APLTPE
Trigger: CTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGG...CCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCAGGCCGGTGTATCGCTaGAGCCCAGGAGTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFRPVYR*SPGVRD
Trigger: ATCTCGAACTCCTGGGCTCAAGCGATACACCGGCCT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS GCA 90 bp ATCATTTCCCACATAAATAGGTTGGCTCCACTCACTCCAGAGCCCTaGCTCTCTGCACATGGAGCTCACTGCTGCTCTCACTTGAACATC +
Preference number: 5 (lower is better)
Translates to: IISHINRLAPLTPEP*LSAHGAHCCSHLNI
Trigger: GATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGAAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHLIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATTGGAATCAGCACTGTTaGGGTTCCTTCCTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHWNQHC*GSFLLP
Trigger: GGGCAAGAGGAAGGAACCCAAACAGTGCTGATTCCA...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGGCACCTCCATGGGTGTaGCCTTCTCAGCCACACCCC +
Preference number: 5 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMAPPWV*PSQPHP
Trigger: GGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGC...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTCTACAGACGATCCTCTaGTTCCGACCAGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPLQTIL*FRPVLN
Trigger: GTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAG...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GTTCCACCTGCAGTCCACCACCCACCACAAAGGCCTCCAATCTGGATGCAGACTAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: VPPAVHHPPQRPPIWMQTNIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...AGTCTGCATCCAGATTGGAGGCCTTTGTGGTGGGTGGTGGACTGCAGGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TGGTTGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCCTCCCCCTGTCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: WLLLTNRILIRYPASSPCLIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...ACAGGGGGAGGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATCACTGGTTTCTCCCATaGGATAGAGAGACGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHHWFLP*DRETSS
Trigger: GGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCCACTGGTTTCTCCCATaGGATAGAGAGACGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLHWFLP*DRETSS
Trigger: GGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR CAA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGAGCAAATTGCAAAGATaGGCAGGTGAGGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWSKLQR*AGEEVL
Trigger: TAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCT...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAGCAAATTGCAAAGATaGGCAGGTGAGGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGESKLQR*AGEEVL
Trigger: TAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCT...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GATACCCAGCTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAGGTGAGTCAAGCAAATaGCAAAGATTGGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: DTQLPPPVIIVGLEDLCQGESSK*QRLAGE
Trigger: CTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC...TTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAGCTGGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGCACTCTCTTTCAGAGTaGGTTTGCTCTCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLHSLSE*VCSLQE
Trigger: CTCCTGAAGAGAGCAAACCAACTCTGAAAGAGAGTG...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp GAGCCCCATCCCTGCCACTTGTTGGCCATGCAGAACAGAGTTAAGCCAATTACCAATATGGAGGAGGATTaGTACAGAGCAACTGTGCAG +
Preference number: 5 (lower is better)
Translates to: EPHPCHLLAMQNRVKPITNMEED*YRATVQ
Trigger: CTGCACAGTTGCTCTGTACAAATCCTCCTCCATATT...GGTAATTGGCTTAACTCTGTTCTGCATGGCCAACAAGTGGCAGGGATGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp GAGGAAGTGATGATGGTTACGGGTTCCCAAAGAATGACTATGAGTTGCACAGGGAGCAGCGGCAGGGCATaGAGAACGAACCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: EEVMMVTGSQRMTMSCTGSSGRA*RTNLIS
Trigger: AGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGCT...CCCTGTGCAACTCATAGTCATTCTTTGGGAACCCGTAACCATCATCACTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACACCCCTAAGCAGGCCTTCAGAAAGTTCATTCTaGATTCAGTGGTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: YCSTSMGVAFSATPLSRPSESSF*IQWSLS
Trigger: TGAAAGGGACCACTGAATCAAGAATGAACTTTCTGA...AGGCCTGCTTAGGGGTGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAAAGAATGACTATGAGTaGCACAGGGCAAGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKKNDYE*HRARRE
Trigger: CTCCCTTCTTGCCCTGTGCAACTCATAGTCATTCTT...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp AAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAACAACCAACTCTGCTTTaGAAGGCTTCATGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KLQRLAGEEVLPCTAWGEQPTLL*KASWRK
Trigger: CTTCCTCCATGAAGCCTTCAAAAGCAGAGTTGGTTG...TTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGCAACCAACTCTGCTTTaGAAGGCTTCATGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GESSKLQRLAGEEVLPCTQPTLL*KASWRK
Trigger: CTTCCTCCATGAAGCCTTCAAAAGCAGAGTTGGTTG...CGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS GCA 90 bp GCTCCACTCACTCCAGAGCCCTGCCTCTCTGCACATGGAGCTCACTaGTGCTCTCACTTGAACATCGTACTTAGAAAGATCATCAATTAT +
Preference number: 5 (lower is better)
Translates to: APLTPEPCLSAHGAH*CSHLNIVLRKIINY
Trigger: ATAATTGATGATCTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCTGGAGTGAGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS-3UTR CAA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp ACAGTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TVQACQDSRCFCAYYPGFSQSRP*LRIKVL
Trigger: CAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCT...GAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCTCCCACATAAATAGGTaGGCTCCACTCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFSHINR*APLTPE
Trigger: CTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGA...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446632.7
CDS-3UTR CAA 90 bp TCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGAACATGGCAAAATGCTaGGATGAGTCAACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSKLQRLAGEEVLPCTAWNMAKC*DESTSL
Trigger: CAGGGAAGTTGACTCATCCAAGCATTTTGCCATGTT...CCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAACATGGCAAAATGCTaGGATGAGTCAACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHNMAKC*DESTSL
Trigger: CAGGGAAGTTGACTCATCCAAGCATTTTGCCATGTT...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGAGCAGCGGCAGGGCATaGAGAACGAACCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQSSGRA*RTNLIS
Trigger: AGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGCT...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCTGTCTGGGTTGTGGTTaGAAAGAGATCAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLCLGCG*KEIRQG
Trigger: ACCCTGTCTGATCTCTTTCAAACCACAACCCAGACA...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCAAGAGCTGGCCACATTaGTGGAGGGGGAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFKSWPH*WRGSSL
Trigger: CAGGGAGCTCCCCCTCCACAAATGTGGCCAGCTCTT...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAAACATGTGTCTCCTGGTaGCTTCTAACTAACCGCATT +
Preference number: 5 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKTCVSW*LLTNRI
Trigger: AATGCGGTTAGTTAGAAGCAACCAGGAGACACATGT...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCCTACAGACGATCCTCTaGTTCCGACCAGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVALQTIL*FRPVLN
Trigger: GTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAG...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: SRRVGANEKPRHLKTSLAGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGAAGTTAAATTCACAATaGAGGTTCCAGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLKLNSQ*RFQETL
Trigger: CAGGGTCTCCTGGAACCTCAATTGTGAATTTAACTT...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRLIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: FTGFMANLFLIEKAVDRELIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCTCCCACATAAATAGGTaGGCTCCACTCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVASHINR*APLTPE
Trigger: CTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGA...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCCACTCTCTCAAGGGCTaGTGTTCATCATTTCCCACA +
Preference number: 5 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSHSLKG*CSSFPT
Trigger: TGTGGGAAATGATGAACACAAGCCCTTGAGAGAGTG...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCAACATGGCAAAATGCTaGGATGAGTCAACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLNMAKC*DESTSL
Trigger: CAGGGAAGTTGACTCATCCAAGCATTTTGCCATGTT...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCGGTGAGTCAAGCAAATaGCAAAGATTGGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSGESSK*QRLAGE
Trigger: CTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TGGTTGCTTCTAACTAACCGCATTCTCATTAGATACCCAGCTTCCTCCCCCTGTTGTCTGGGTTGTGGTTaGAAAGAGATCAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: WLLLTNRILIRYPASSPCCLGCG*KEIRQG
Trigger: ACCCTGTCTGATCTCTTTCAAACCACAACCCAGACA...ACAGGGGGAGGAAGCTGGGTATCTAATGAGAATGCGGTTAGTTAGAAGCAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CTCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTACATGTGTCTCCTGGTaGCTTCTAACTAACCGCATT +
Preference number: 5 (lower is better)
Translates to: LQKAFKECARWGFWALLPTCVSW*LLTNRI
Trigger: AATGCGGTTAGTTAGAAGCAACCAGGAGACACATGT...AGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCCAGGTGGTCGGGCTGTaGGCAAATGTGACCTTCACC +
Preference number: 5 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFQVVGL*ANVTFT
Trigger: GGTGAAGGTCACATTTGCCAACAGCCCGACCACCTG...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTCTGGGATTACCTTTTTaGATCACAAGGAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTLGLPF*ITRKAA
Trigger: GGCAGCCTTCCTTGTGATCAAAAAAGGTAATCCCAG...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGCCAGGTCTAGGAGAGTaGGCGCTAATGAGAAGCCTA +
Preference number: 5 (lower is better)
Translates to: FTGFMANLFLIEKAVDREPGLGE*ALMRSL
Trigger: TAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGG...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp TCCCACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: SHHARVSRDQVLESVNLGNIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...CCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp CAAGTGCTAGAGTCAGTTAATCTGGGGTTAGAGCCCCATCCCTGCCACTTGTTGAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QVLESVNLGLEPHPCHLLRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...CAACAAGTGGCAGGGATGGGGCTCTAACCCCAGATTAACTGACTCTAGCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TARSKYSWTLALKAVCCESQSRP*LRIKVL
Trigger: CAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTCACTGGTTTCTCCCATaGGATAGAGAGACGAGTTCC +
Preference number: 5 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVHWFLP*DRETSS
Trigger: GGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACAGCAAATTGCAAAGATaGGCAGGTGAGGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNSKLQR*AGEEVL
Trigger: TAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCT...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCGGTGAGTCAAGCAAATaGCAAAGATTGGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVAGESSK*QRLAGE
Trigger: CTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCACTCTCTTTCAGAGTaGGTTTGCTCTCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQHSLSE*VCSLQE
Trigger: CTCCTGAAGAGAGCAAACCAACTCTGAAAGAGAGTG...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCAGCAGCGGCAGGGCATaGAGAACGAACCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFSSGRA*RTNLIS
Trigger: AGAGATAAGGTTCGTTCTCAATGCCCTGCCGCTGCT...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCAGAAAGCATTTAAAGAGTGTGCCAGGTGGGGATTCTGGGCACTGTTACCTCGTTGTTCTGAAGTCTTaGGCAGCAAACATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SRKHLKSVPGGDSGHCYLVVLKS*AANISS
Trigger: TGAAGAGATGTTTGCTGCCAAAGACTTCAGAACAAC...GAGGTAACAGTGCCCAGAATCCCCACCTGGCACACTCTTTAAATGCTTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTGATGCAAAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGGCCTGCATGAATAGCTaGAGGTCTGAGGCATTTCAA +
Preference number: 5 (lower is better)
Translates to: ADAKCFLPQMVAECYNWQACMNS*RSEAFQ
Trigger: TTGAAATGCCTCAGACCTCAAGCTATTCATGCAGGC...CTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTTTGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTACCCACATAAATAGGTaGGCTCCACTCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SRRVGANEKPRHLKTSLATHINR*APLTPE
Trigger: CTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGT...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS GCA 90 bp AAGTCCTGGGAAACCAGCATGCGATATTTCTCCCCAGTGTGTCTTTaGTGTATTCTTGGCATTCTTCAGTCCAAGAGCCATACCTATAGT +
Preference number: 5 (lower is better)
Translates to: KSWETSMRYFSPVCL*CILGILQSKSHTYS
Trigger: ACTATAGGTATGGCTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGACACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 90 bp AATATGGAGGAGGATTTGTACAGAGCAACTGTGCAGGAGCTGAACTaGAACTCCCAACAACCAAACTGCTGTCAAACGAAAGAATCTCTC +
Preference number: 5 (lower is better)
Translates to: NMEEDLYRATVQELN*NSQQPNCCQTKESL
Trigger: GAGAGATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTGCTCTGTACAAATCCTCCTCCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS-3UTR CAA 90 bp AGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCTACAGACGATCCTCTaGTTCCGACCAGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: SIHTFKRYKTGVSGCIASLQTIL*FRPVLN
Trigger: GTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAG...CGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTCTACAGACGATCCTCTaGTTCCGACCAGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: ETILRPTSERVRFWDYLFLQTIL*FRPVLN
Trigger: GTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAG...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPNIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTGAGGTGAGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SEVSQANCKDWQVRRCYPRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...AGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACTCACCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCAAGTTAAATTCACAATaGAGGTTCCAGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSKLNSQ*RFQETL
Trigger: CAGGGTCTCCTGGAACCTCAATTGTGAATTTAACTT...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GATGAAAGAGACACAGGATCTCTATTATTTCTTCCCACAGCTTGTGAGTGTGATCTGATAGCAGAGTGCTaGCTGGAGCCGTTAACAAGC +
Preference number: 5 (lower is better)
Translates to: DERDTGSLLFLPTACECDLIAEC*LEPLTS
Trigger: GCTTGTTAACGGCTCCAGCAAGCACTCTGCTATCAG...ATCACACTCACAAGCTGTGGGAAGAAATAATAGAGATCCTGTGTCTCTTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp TTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATGGGGAGAAAAATATCTGATAACTGTCTaGTCTGCATTTTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LQRLAGEEVLPCTAWGEKYLITV*SAFSLS
Trigger: AGAGAGTGAAAATGCAGACAAGACAGTTATCAGATA...TTTTTCTCCCCATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCAATATGGAGGAGGATTaGTACAGAGCAACTGTGCAG +
Preference number: 5 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVANMEED*YRATVQ
Trigger: CTGCACAGTTGCTCTGTACAAATCCTCCTCCATATT...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGCCAAACGGGCACTGTATATTGGGATATTaGATGGAATGGCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: PQMVAECYNWQLKQPNGHCILGY*MEWPCR
Trigger: TCTACAAGGCCATTCCATCAAATATCCCAATATACA...GTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCAAGCAAATTGCAAAGATTGGCAGGTGAGGAGGTGCTACCCTGTACGGCATTTGTGCCATCAGAGATaGTTTTCAGTTCTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SQANCKDWQVRRCYPVRHLCHQR*FSVLCS
Trigger: AGAACAGAGAACTGAAAACAATCTCTGATGGCACAA...ATGCCGTACAGGGTAGCACCTCCTCACCTGCCAATCTTTGCAATTTGCTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS TCA 90 bp AAGCAAATATGGAGGAGGATTTGTACAGAGCAACTGTGCAGGAGCTaGACTGGAACTCCCAACAACCAAACTGCTGTCAAACGAAAGAAT +
Preference number: 5 (lower is better)
Translates to: KQIWRRICTEQLCRS*TGTPNNQTAVKRKN
Trigger: ATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTGCTCTGTACAAATCCTCCTCCATATTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS GCA 90 bp CACTGGTTTCTCCCATTGGATAGAGAGACGAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGGATTTATTTGATCAATGGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: HWFLPLDRETSSFNL*CDIQWRIYLINGVK
Trigger: CTTCACGCCATTGATCAAATAAATCCTCCACTGAATGTCACAGCAGAGATTGAAGGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS-3UTR CAA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTAACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: HHARVSRDQVLESVNLGLTLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp AAACATTTTGCCAACTATTGCAGCACCTCCATGGGTGTTGCCTTCTCAGCCACAACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: KHFANYCSTSMGVAFSATTLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...TGTGGCTGAGAAGGCAACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GCTACAATTGGCAGCTTAAACAGCCAAACGGGCACAGCCAGAAGTAAATACAGCACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: ATIGSLNSQTGTARSKYSTLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...GCTGTATTTACTTCTGGCTGTGCCCGTTTGGCTGTTTAAGCTGCCAATTGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CTTCCTCCCCCTGTCATTATTGTAGGCCTTGAGGATCTCTGCCAAATACTGTTCACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LPPPVIIVGLEDLCQILFTLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...GAACAGTATTTGGCAGAGATCCTCAAGGCCTACAATAATGACAGGGGGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GGCACCAGGTCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: GTRSRRVGANEKPRHLKTNIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...AGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGACCTGGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGCACTGCTGCTCTCACTaGAACATCGTACTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRHCCSH*NIVLRK
Trigger: CTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTG...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTCACTGCTGCTCTCACTaGAACATCGTACTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: SRRVGANEKPRHLKTSLAHCCSH*NIVLRK
Trigger: CTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTG...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTCACTGCTGCTCTCACTaGAACATCGTACTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVHCCSH*NIVLRK
Trigger: CTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTG...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAATCCCACATAAATAGGTaGGCTCCACTCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQSHINR*APLTPE
Trigger: CTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGA...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCCACTCTCTCAAGGGCTaGTGTTCATCATTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFHSLKG*CSSFPT
Trigger: TGTGGGAAATGATGAACACAAGCCCTTGAGAGAGTG...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCACTCTCTCAAGGGCTaGTGTTCATCATTTCCCACA +
Preference number: 5 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMHSLKG*CSSFPT
Trigger: TGTGGGAAATGATGAACACAAGCCCTTGAGAGAGTG...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGAATATGGAGGAGGATTaGTACAGAGCAACTGTGCAG +
Preference number: 5 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRNMEED*YRATVQ
Trigger: CTGCACAGTTGCTCTGTACAAATCCTCCTCCATATT...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TGCTATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGACATTTTGCCAACTATaGCAGCACCTCCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: CYRKDSLESKFMVHSRLMTFCQL*QHLHGC
Trigger: ACACCCATGGAGGTGCTGCAATAGTTGGCAAAATGT...CATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GTGCAGGCTTGTCAAGATTCAAGATGTTTCTGTGCCTATTACCCAGGGTTCAACATGGGCTACTTTGTGTaGCTCCTGAAACACATATAC +
Preference number: 5 (lower is better)
Translates to: VQACQDSRCFCAYYPGFNMGYFV*LLKHIY
Trigger: GTATATGTGTTTCAGGAGCAACACAAAGTAGCCCAT...GTTGAACCCTGGGTAATAGGCACAGAAACATCTTGAATCTTGACAAGCCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS TCA 90 bp CAGAATCCTCCAGGGTCTCAACTCCAGGCTTCTCTATATAACAGATaGCTTCAATTTCCGTCTCACTGGACCCAGCTTTATTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: QNPPGSQLQASLYNR*LQFPSHWTQLYFTD
Trigger: ATCTGTAAAATAAAGCTGGGTCCAGTGAGACGGAAATTGAAGTCATCTGTTATATAGAGAAGCCTGGAGTTGAGACCCTGGAGGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438560.5
CDS-3UTR CAA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: FLIEKAVDREKISHNRDMGWSAH*LKSLCG
Trigger: TCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCC...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp GAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTAAGTTAAATTCACAATaGAGGTTCCAGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: EIQDWCVWVYCFAGKLSVKLNSQ*RFQETL
Trigger: CAGGGTCTCCTGGAACCTCAATTGTGAATTTAACTT...AACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TCTAGGAGAGTTGGCGCTAATGAGAAGCCTAGACACTTAAAAACTTCACTGGCTAAGTTAAATTCACAATaGAGGTTCCAGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: SRRVGANEKPRHLKTSLAKLNSQ*RFQETL
Trigger: CAGGGTCTCCTGGAACCTCAATTGTGAATTTAACTT...AGCCAGTGAAGTTTTTAAGTGTCTAGGCTTCTCATTAGCGCCAACTCTCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430514.6
CDS-3UTR CAA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFSQSRP*LRIKVL
Trigger: CAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCT...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGGTGAGTCAAGCAAATaGCAAAGATTGGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNGESSK*QRLAGE
Trigger: CTCACCTGCCAATCTTTGCAATTTGCTTGACTCACC...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAACACTCTCTTTCAGAGTaGGTTTGCTCTCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQHSLSE*VCSLQE
Trigger: CTCCTGAAGAGAGCAAACCAACTCTGAAAGAGAGTG...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CACCATGCCAGAGTGTCCAGAGATCAAGTGCTAGAGTCAGTTAATCTGGGGTTATATCTGATAACTGTCTaGTCTGCATTTTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: HHARVSRDQVLESVNLGLYLITV*SAFSLS
Trigger: AGAGAGTGAAAATGCAGACAAGACAGTTATCAGATA...TAACCCCAGATTAACTGACTCTAGCACTTGATCTCTGGACACTCTGGCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAATGCCAACTGTCTGGGTaGTGGTTTGAAAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQCQLSG*WFERDQ
Trigger: CTGATCTCTTTCAAACCACAACCCAGACAGTTGGCA...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp ATTTCAAACTCTTTGACTTGCTATGACAAGGCTGGTGAGAACAGTATAGACCACTGCCAACTGTCTGGGTaGTGGTTTGAAAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: ISNSLTCYDKAGENSIDHCQLSG*WFERDQ
Trigger: CTGATCTCTTTCAAACCACAACCCAGACAGTTGGCA...GTGGTCTATACTGTTCTCACCAGCCTTGTCATAGCAAGTCAAAGAGTTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTAAGAATGACTATGAGTaGCACAGGGCAAGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: DLDEASILLRDTRLVCLGKNDYE*HRARRE
Trigger: CTCCCTTCTTGCCCTGTGCAACTCATAGTCATTCTT...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGCCTGCATGAATAGCTaGAGGTCTGAGGCATTTCAA +
Preference number: 5 (lower is better)
Translates to: DLDEASILLRDTRLVCLGACMNS*RSEAFQ
Trigger: TTGAAATGCCTCAGACCTCAAGCTATTCATGCAGGC...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS TCA 90 bp GTTGGTTTGCTCTCTTCAGGAGTGGGAATTAACTTTTACTCATGGTaGCAAGGTAAACAAGTTTTCCGTGGGTACTCTAAAGCGTTGCAT +
Preference number: 5 (lower is better)
Translates to: VGLLSSGVGINFYSW*QGKQVFRGYSKALH
Trigger: ATGCAACGCTTTAGAGTACCCACGGAAAACTTGTTTACCTTGTCACCATGAGTAAAAGTTAATTCCCACTCCTGAAGAGAGCAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS-3UTR CAA 90 bp TTCACTGGCTTCATGGCAAATCTATTCCTGATTGAAAAGGCAGTAGACCGAGAGACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: FTGFMANLFLIEKAVDRETLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...CTCTCGGTCTACTGCCTTTTCAATCAGGAATAGATTTGCCATGAAGCCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAAAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LIEKAVDREKISHNRDMKSQSRP*LRIKVL
Trigger: CAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCT...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTCACTGGTTTCTCCCATaGGATAGAGAGACGAGTTCC +
Preference number: 5 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFHWFLP*DRETSS
Trigger: GGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGCACTGGTTTCTCCCATaGGATAGAGAGACGAGTTCC +
Preference number: 5 (lower is better)
Translates to: FLIEKAVDREKISHNRDMHWFLP*DRETSS
Trigger: GGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp GATTTGGATGAAGCATCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTCACTGCTGCTCTCACTaGAACATCGTACTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: DLDEASILLRDTRLVCLGHCCSH*NIVLRK
Trigger: CTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTG...ACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGATGCTTCATCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256452.7
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp ATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGTAAATTGAGTGTTGCCTATCTGATAACTGTCTaGTCTGCATTTTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: IQDWCVWVYCFAGKLSVAYLITV*SAFSLS
Trigger: AGAGAGTGAAAATGCAGACAAGACAGTTATCAGATA...GGCAACACTCAATTTACCTGCGAAGCAATACACCCAGACACACCAGTCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTCACTCTCTCAAGGGCTaGTGTTCATCATTTCCAATG +
Preference number: 5 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVHSLKG*CSSFPM
Trigger: CATTGGAAATGATGAACACAAGCCCTTGAGAGAGTG...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418488.6
CDS-3UTR CAA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCCTTGAGAGACTAGGATaGATCTGGCATTACTTGACC +
Preference number: 5 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFLERLG*IWHYLT
Trigger: GGTCAAGTAATGCCAGATCAATCCTAGTCTCTCAAG...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTCTTGAGAGACTAGGATaGATCTGGCATTACTTGACC +
Preference number: 5 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVLERLG*IWHYLT
Trigger: GGTCAAGTAATGCCAGATCAATCCTAGTCTCTCAAG...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp AGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATGCTTTCTTCACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SLESKFMVHSRLMQNAFFTLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...GAAGAAAGCATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTACTTTAATGGTGAAATaGACAGGTGGGAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: ETILRPTSERVRFWDYLFTLMVK*TGGRSE
Trigger: TTCACTTCTCCCACCTGTCAATTTCACCATTAAAGT...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp ACAGCCAGAAGTAAATACAGCTGGACGTTAGCCTTAAAAGCTGTCTGTTGTGAAAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TARSKYSWTLALKAVCCENIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...TTCACAACAGACAGCTTTTAAGGCTAACGTCCAGCTGTATTTACTTCTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp GAAACCATTTTAAGACCCACGAGTGAACGGGTACGTTTCTGGGATTACCTTTTTAACATTCCTTTGCTCTaGATCAGGATTTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: ETILRPTSERVRFWDYLFNIPLL*IRIWFP
Trigger: TGGAAACCAAATCCTGATCAAGAGCAAAGGAATGTT...AAAAAGGTAATCCCAGAAACGTACCCGTTCACTCGTGGGTCTTAAAATGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCAAGTTAAATTCACAATaGAGGTTCCAGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFKLNSQ*RFQETL
Trigger: CAGGGTCTCCTGGAACCTCAATTGTGAATTTAACTT...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTCACTGGTTTCTCCCATaGGATAGAGAGACGAGTTCC +
Preference number: 5 (lower is better)
Translates to: EKAVDREKISHNRDMKPFHWFLP*DRETSS
Trigger: GGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTG...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp GCCAATATCATGACTTTACCTTACATCAACCTGCTGCTGATGGTGTTTACTGTTGTTGTTCTGAAGTCTTaGGCAGCAAACATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ANIMTLPYINLLLMVFTVVVLKS*AANISS
Trigger: TGAAGAGATGTTTGCTGCCAAAGACTTCAGAACAAC...AACAGTAAACACCATCAGCAGCAGGTTGATGTAAGGTAAAGTCATGATATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCCATACTTTTAAGAGATACAAGACTGGTGTGTCTGGGTGTATTGCTTCGCAGGATTGGAACGGATATCTaGGAAAAGCATGTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SILLRDTRLVCLGVLLRRIGTDI*EKHVCS
Trigger: AGAACAAACATGCTTTTCCAAGATATCCGTTCCAAT...CCTGCGAAGCAATACACCCAGACACACCAGTCTTGTATCTCTTAAAAGTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTACCCACATAAATAGGTaGGCTCCACTCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: EKAVDREKISHNRDMKPFTHINR*APLTPE
Trigger: CTCTGGAGTGAGTGGAGCCAACCTATTTATGTGGGT...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp TATAGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: YRKDSLESKFMVHSRLMQRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...TTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp TGGCCATGCAGAACAGAGTTAAGCCAATTACCTAAACTTTCCAAACAAGTTTTTCACTGCTGCTCTCACTaGAACATCGTACTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: WPCRTELSQLPKLSKQVFHCCSH*NIVLRK
Trigger: CTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTG...AAAAACTTGTTTGGAAAGTTTAGGTAATTGGCTTAACTCTGTTCTGCATGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383846.5
CDS-3UTR CAA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGTATCTGATAACTGTCTaGTCTGCATTTTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQYLITV*SAFSLS
Trigger: AGAGAGTGAAAATGCAGACAAGACAGTTATCAGATA...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418488.6
ENST00000438560.5
ENST00000446632.7
CDS-3UTR CAA 90 bp CACCATGAAAACGTTTGGATTTTTAATCAGGATGTTCTTTGCCCACGTGGATTCTCAGAAAGTTCATTCTaGATTCAGTGGTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: HHENVWIFNQDVLCPRGFSESSF*IQWSLS
Trigger: TGAAAGGGACCACTGAATCAAGAATGAACTTTCTGA...GAATCCACGTGGGCAAAGAACATCCTGATTAAAAATCCAAACGTTTTCATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCATGGGCTACTTTGTGTaGCTCCTGAAACACATATAC +
Preference number: 5 (lower is better)
Translates to: SHLPSAADFQILVFIRLSMGYFV*LLKHIY
Trigger: GTATATGTGTTTCAGGAGCAACACAAAGTAGCCCAT...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp AAATGCTTTCTTCCTCAGATGGTAGCTGAGTGCTACAATTGGCAGCTTAAACAGATTGGAACGGATATCTaGGAAAAGCATGTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: KCFLPQMVAECYNWQLKQIGTDI*EKHVCS
Trigger: AGAACAAACATGCTTTTCCAAGATATCCGTTCCAAT...CTGTTTAAGCTGCCAATTGTAGCACTCAGCTACCATCTGAGGAAGAAAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS CCA 90 bp TATTTTTACTTCATAATCAAAGCAATGGATTGGAAAAGCAGACACTaGTTTCTCCCATTGGATAGAGAGACGAGTTCCTTCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: YFYFIIKAMDWKSRH*FLPLDRETSSFNLC
Trigger: GCAGAGATTGAAGGAACTCGTCTCTCTATCCAATGGGAGAAACCAGTGTCTGCTTTTCCAATCCATTGCTTTGATTATGAAGTAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS-3UTR CAA 90 bp TTCCTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAGTTAAATTCACAATaGAGGTTCCAGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: FLIEKAVDREKISHNRDMKLNSQ*RFQETL
Trigger: CAGGGTCTCCTGGAACCTCAATTGTGAATTTAACTT...CATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACACTGCTGCTCTCACTaGAACATCGTACTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: LIEKAVDREKISHNRDMKHCCSH*NIVLRK
Trigger: CTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTG...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp AGAAAAGACAGTCTTGAATCCAAGTTCATGGTTCACTCCAGGCTGATGCAAAATTGTATATTGGGATATTaGATGGAATGGCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: RKDSLESKFMVHSRLMQNCILGY*MEWPCR
Trigger: TCTACAAGGCCATTCCATCAAATATCCCAATATACA...ATTTTGCATCAGCCTGGAGTGAACCATGAACTTGGATTCAAGACTGTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp TCACATCTTCCTTCAGCGGCTGATTTTCAAATTTTGGTATTCATAAGACTCTCCTTGTGCCATCAGAGATaGTTTTCAGTTCTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SHLPSAADFQILVFIRLSLCHQR*FSVLCS
Trigger: AGAACAGAGAACTGAAAACAATCTCTGATGGCACAA...GGAGAGTCTTATGAATACCAAAATTTGAAAATCAGCCGCTGAAGGAAGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTACCCTGGTACTCAATTaGAAGGATGTAGAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSTLVLN*KDVEAG
Trigger: TCCTGCTTCTACATCCTTCAAATTGAGTACCAGGGT...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CTAATTAGGTTTTTCACCTTTACTTGTGCCATCAGAGATTGTTTTCAGTTCTCTAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LIRFFTFTCAIRDCFQFSRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...AGAGAACTGAAAACAATCTCTGATGGCACAAGTAAAGGTGAAAAACCTAATTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418488.6
ENST00000446632.7
CDS-3UTR CAA 90 bp CTGATTGAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAAAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LIEKAVDREKISHNRDMKRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...TTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTCAATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS-3UTR CAA 90 bp GAAAAGGCAGTAGACCGAGAGAAAATTAGTCACAATAGAGATATGAAACCATTTAGGATGGTTACACATTaGCTTTCAGTGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: EKAVDREKISHNRDMKPFRMVTH*LSVILV
Trigger: AACCAGAATCACTGAAAGCAAATGTGTAACCATCCT...AAATGGTTTCATATCTCTATTGTGACTAATTTTCTCTCGGTCTACTGCCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430514.6
ENST00000456302.5
CDS TCA 72 bp CGTCAGGCACAGGACCAATGCTCAATGTGCCTGGCCTaGGAAATGCGGTGGCCATGCGATGAGAAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: RQAQDQCSMCLA*EMRWPCDEKQR
Trigger: CCGCTGCTTCTCATCGCATGGCCACCGCATTTCTCAGGCCAGGCACATTGAGCATTGGTCCTGTGCCTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 72 bp CTGGTGGGGCATGAAGTTCAGCAGAAGCCCAGCTGCTaGCCAGTAGTGAGTGGTCGTTCTGCAGGATGGTCC +
Preference number: 6 (lower is better)
Translates to: LVGHEVQQKPSC*PVVSGRSAGWS
Trigger: GGACCATCCTGCAGAACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTGCTGAACTTCATGCCCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 72 bp CATAGCGTCAGGCACAGGACCAATGCTCAATGTGCCTaGCCCGAACAGTCCGTCCTACCCTGGGGTAGGTTT +
Preference number: 6 (lower is better)
Translates to: HSVRHRTNAQCA*PEQSVLPWGRF
Trigger: AAACCTACCCCAGGGTAGGACGGACTGTTCGGGCCAGGCACATTGAGCATTGGTCCTGTGCCTGACGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445701.5
CDS GCA 72 bp GAAGCCCAGCTGCTGGCCAGTAGTGAGTGGTCGTTCTaGAGGATGGTCCGCACACTTGCTGAAAAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: EAQLLASSEWSF*RMVRTLAEKPL
Trigger: CAAAGGCTTTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACCACTCACTACTGGCCAGCAGCTGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 72 bp AGTTCAGCAGAAGCCCAGCTGCTGGCCAGTAGTGAGTaGTCGTTCTGCAGGATGGTCCGCACACTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: SSAEAQLLASSE*SFCRMVRTLAE
Trigger: TTCAGCAAGTGTGCGGACCATCCTGCAGAACGACCACTCACTACTGGCCAGCAGCTGGGCTTCTGCTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 72 bp ACGATCCTCTTGTTCCGACCAGTACTCAACAGAAGATaGCGAGGACCGTGTCTGTCGTGTCTATGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: TILLFRPVLNRR*RGPCLSCLCSW
Trigger: CCACGAGCATAGACACGACAGACACGGTCCTCGCCATCTTCTGTTGAGTACTGGTCGGAACAAGAGGATCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS CAA 90 bp TGCTTGCTGGAGCCGTTAACAAGCACCGCAAGCCAGTCACGCCCTTaGCTGAGGATAAAAGTCCTGGGAAACCAGCATGCGATATTTCTC +
Preference number: 6 (lower is better)
Translates to: CLLEPLTSTASQSRP*LRIKVLGNQHAIFL
Trigger: GAGAAATATCGCATGCTGGTTTCCCAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCTTGCGGTGCTTGTTAACGGCTCCAGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS CAA 90 bp TGCTGGCCAGTAGTGAGTGGTCGTTCTGCAGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGAGGATGGTTACACATTTGCTTTCAG +
Preference number: 6 (lower is better)
Translates to: CWPVVSGRSAGWSAH*LKSLCGGWLHICFQ
Trigger: CTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACCACTCACTACTGGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS GCA 72 bp ACTCCAGAGCCCTGCCTCTCTGCACATGGAGCTCACTaGTGCTCTCACTTGAACATCGTACTTAGAAAGATC +
Preference number: 6 (lower is better)
Translates to: TPEPCLSAHGAH*CSHLNIVLRKI
Trigger: GATCTTTCTAAGTACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGCAGAGAGGCAGGGCTCTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS GCA 72 bp GTGCAGGAGCTGAACTGGAACTCCCAACAACCAAACTaGTGTCAAACGAAAGAATCTCTCGTCCAGATAGCC +
Preference number: 6 (lower is better)
Translates to: VQELNWNSQQPN*CQTKESLVQIA
Trigger: GGCTATCTGGACGAGAGATTCTTTCGTTTGACAGCAGTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS CCA 72 bp CATAGCGTCAGGCACAGGACCAATGCTCAATGTGCCTaGCCCTTATCTCTGGGTGCACTTTTTAACTTAGAG +
Preference number: 6 (lower is better)
Translates to: HSVRHRTNAQCA*PLSLGALFNLE
Trigger: CTCTAAGTTAAAAAGTGCACCCAGAGATAAGGGCCAGGCACATTGAGCATTGGTCCTGTGCCTGACGCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427088.1
CDS CAA 72 bp GTAGTGAGTGGTCGTTCTGCAGGATGGTCCGCACACTaGCTGAAAAGCCTTTGTGGAGGATGGTTACACATT +
Preference number: 6 (lower is better)
Translates to: VVSGRSAGWSAH*LKSLCGGWLHI
Trigger: AATGTGTAACCATCCTCCACAAAGGCTTTTCAGCAAGTGTGCGGACCATCCTGCAGAACGACCACTCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS CAA 72 bp GCCACGATGATCATATCCTGTCTACAGACGATCCTCTaGTTCCGACCAGTACTCAACAGAAGATGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: ATMIISCLQTIL*FRPVLNRRWRG
Trigger: TCCTCGCCATCTTCTGTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAGACAGGATATGATCATCGTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000427088.1
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS GCA 72 bp CCCTTTGCTGAGGATAAAAGTCCTGGGAAACCAGCATaGGATATTTCTCCCCAGTGTGTCTTTGCTGTATTC +
Preference number: 6 (lower is better)
Translates to: PFAEDKSPGKPA*DISPQCVFAVF
Trigger: GAATACAGCAAAGACACACTGGGGAGAAATATCGCATGCTGGTTTCCCAGGACTTTTATCCTCAGCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS CCA 72 bp GAGGATTTGTACAGAGCAACTGTGCAGGAGCTGAACTaGAACTCCCAACAACCAAACTGCTGTCAAACGAAA +
Preference number: 6 (lower is better)
Translates to: EDLYRATVQELN*NSQQPNCCQTK
Trigger: TTTCGTTTGACAGCAGTTTGGTTGTTGGGAGTTCCAGTTCAGCTCCTGCACAGTTGCTCTGTACAAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS CAA 72 bp CTAAAACAATCTGTAGCCTGTCTACAGACGATCCTCTaGTTCCGACCAGTACTCAACAGAAGATGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: LKQSVACLQTIL*FRPVLNRRWRG
Trigger: TCCTCGCCATCTTCTGTTGAGTACTGGTCGGAACAAGAGGATCGTCTGTAGACAGGCTACAGATTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000418488.6
ENST00000430514.6
CDS CCA 72 bp ATGATGGGATGGCAACACGTTTTCTCTAAGCAAATATaGAGGAGGATTTGTACAGAGCAACTGTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: MMGWQHVFSKQI*RRICTEQLCRS
Trigger: GCTCCTGCACAGTTGCTCTGTACAAATCCTCCTCCATATTTGCTTAGAGAAAACGTGTTGCCATCCCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS CCA 72 bp GAGACGAGTTCCTTCAATCTCTGCTGTGACATTCAGTaGAGGATTTATTTGATCAATGGCGTGAAGGGCAAA +
Preference number: 6 (lower is better)
Translates to: ETSSFNLCCDIQ*RIYLINGVKGK
Trigger: TTTGCCCTTCACGCCATTGATCAAATAAATCCTCCACTGAATGTCACAGCAGAGATTGAAGGAACTCGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS TCA 72 bp AGCCTTTGTGGAGGATGGTTACACATTTGCTTTCAGTaGTTCTGGTTTCATAGTCATCTTCTTTTGGAGCGT +
Preference number: 6 (lower is better)
Translates to: SLCGGWLHICFQ*FWFHSHLLLER
Trigger: ACGCTCCAAAAGAAGATGACTATGAAACCAGAATCACTGAAAGCAAATGTGTAACCATCCTCCACAAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000430514.6
ENST00000438560.5
ENST00000445701.5
ENST00000446632.7
ENST00000456302.5
CDS GCA 72 bp CTCCCATTGGATAGAGAGACGAGTTCCTTCAATCTCTaGTGTGACATTCAGTGGAGGATTTATTTGATCAAT +
Preference number: 6 (lower is better)
Translates to: LPLDRETSSFNL*CDIQWRIYLIN
Trigger: ATTGATCAAATAAATCCTCCACTGAATGTCACAGCAGAGATTGAAGGAACTCGTCTCTCTATCCAATGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS CAA 90 bp AAACCAGCATGCGATATTTCTCCCCAGTGTGTCTTTGCTGTATTCTaGGCATTCTTCAGTCCAAGAGCCATACCTATAGTAGAGAAAATA +
Preference number: 6 (lower is better)
Translates to: KPACDISPQCVFAVF*AFFSPRAIPIVEKI
Trigger: TATTTTCTCTACTATAGGTATGGCTCTTGGACTGAAGAATGCCAAGAATACAGCAAAGACACACTGGGGAGAAATATCGCATGCTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000256452.7
ENST00000311981.12
ENST00000383846.5
ENST00000418488.6
ENST00000430514.6
ENST00000438560.5
ENST00000446632.7
ENST00000456302.5
CDS CAA 90 bp AACGAAAGAATCTCTCGTCCAGATAGCCATTATCTGATAACTGTCTaGTCTGCATTTTCACTCTCTTTCAGAGTTGGTTTGCTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: NERISRPDSHYLITV*SAFSLSFRVGLLSS
Trigger: TGAAGAGAGCAAACCAACTCTGAAAGAGAGTGAAAATGCAGACAAGACAGTTATCAGATAATGGCTATCTGGACGAGAGATTCTTTCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383846.5
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1
CDS TCA 72 bp CTCTCTTCAGGAGTGGGAATTAACTTTTACTCATGGTaGCAAGGTAAACAAGTTTTCCGTGGGTACTCTAAA +
Preference number: 6 (lower is better)
Translates to: LSSGVGINFYSW*QGKQVFRGYSK
Trigger: TTTAGAGTACCCACGGAAAACTTGTTTACCTTGTCACCATGAGTAAAAGTTAATTCCCACTCCTGAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418488.6
ENST00000427088.1
ENST00000438560.5
ENST00000446632.7
ENST00000466722.1