RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL4I1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104951

Ensembl transcript IDs: ENST00000341114.7, ENST00000391826.7, ENST00000593956.5, ENST00000595948.5, ENST00000596011.1, ENST00000596022.5, ENST00000597295.5, ENST00000601717.5

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTaGCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCGCC +
Preference number: 1 (lower is better)
Translates to: ERQAQRLFPAQAGER*RRVRPRVRGQQQRA
Trigger: GGCGCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp GACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCAATaGCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCT +
Preference number: 1 (lower is better)
Translates to: DAGAVPELAHDRPVQ*RHVVERQAQRLFPA
Trigger: AGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 90 bp TGGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTaGCGCACGACAGGCCCGTGCAATGCCGCCACGTCGTCGAGCGCC +
Preference number: 1 (lower is better)
Translates to: WSSAQRLTTPVPSQS*RTTGPCNAATSSSA
Trigger: GGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp TTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTaGAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: LTTPVPSQSWRTTGP*NAATSSSAKRNASS
Trigger: GGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 90 bp TGCCAGAGCGCCGGCGGCTGTACCACAAAGCCACCCTGGCTGTGCTaGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCGTCCCAGAGC +
Preference number: 1 (lower is better)
Translates to: CQSAGGCTTKPPWLC*SSAQRLTTPVPSQS
Trigger: GCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGCGCTCTGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR TCA 90 bp GTACCACAAAGCCACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTTaGCGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGT +
Preference number: 1 (lower is better)
Translates to: VPQSHPGCAGPPPNA*RRRCRPRAGARQAR
Trigger: ACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp GTTTGCCAGAGCGCCGGCGGCTGTACCACAAAGCCACCCTGGCTGTaGTGGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCGTCCCAG +
Preference number: 1 (lower is better)
Translates to: VCQSAGGCTTKPPWL*WSSAQRLTTPVPSQ
Trigger: CTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGCGCTCTGGCAAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 90 bp GCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCCCTaGGTCATCGCCACCACGGGCGCGTTCAACAGCACAAGCCCGGAC +
Preference number: 1 (lower is better)
Translates to: AGGEVSICTCTSCGP*VIATTGAFNSTSPD
Trigger: GTCCGGGCTTGTGCTGTTGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 90 bp GCTCCTCGCGCCAGAAGGGCCTGCGGAAGCTTAGGAACACCTTGGTaGCCGGCACGTAGTGCAGCCTCCGCAGCGCCTCCTGCATGTGGC +
Preference number: 1 (lower is better)
Translates to: APRARRACGSLGTPW*PARSAASAAPPACG
Trigger: GCCACATGCAGGAGGCGCTGCGGAGGCTGCACTACGTGCCGGCCACCAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR TCA 90 bp GCGCGGCGGCGGGTAGAAAATCATGCGCGACGGGCGATCGGTGTTTaGGTGGCCGCCTTCAATGTGCTCCTCGCGCCAGAAGGGCCTGCG +
Preference number: 1 (lower is better)
Translates to: ARRRVENHARRAIGV*VAAFNVLLAPEGPA
Trigger: CGCAGGCCCTTCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGCCGCCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp AGCACCTTCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACGTaGACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTTC +
Preference number: 1 (lower is better)
Translates to: STFRFRAGGEVSICT*TSCGPWVIATTGAF
Trigger: GAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGAAGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp GCCTTCAGCACCTTCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTaGACGTGCACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGC +
Preference number: 1 (lower is better)
Translates to: AFSTFRFRAGGEVSI*TCTSCGPWVIATTG
Trigger: GCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGAAGGTGCTGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp AGGCCAGCAGCAGCGCGCCCTCGCGCGGCGGCGGGTAGAAAATCATaGGCGACGGGCGATCGGTGTTTGAGTGGCCGCCTTCAATGTGCT +
Preference number: 1 (lower is better)
Translates to: RPAAARPRAAAGRKS*ATGDRCLSGRLQCA
Trigger: AGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGCCGCCGCGCGAGGGCGCGCTGCTGCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 90 bp TTTTCGGTTTGCCAGAGCGCCGGCGGCTGTACCACAAAGCCACCCTaGCTGTGCTGGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCG +
Preference number: 1 (lower is better)
Translates to: FSVCQSAGGCTTKPP*LCWSSAQRLTTPVP
Trigger: CGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp AGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTaGGGTCCCTGGGTCATCGCCACCACGGGCGCGTTCAACAGCACA +
Preference number: 1 (lower is better)
Translates to: RFRAGGEVSICTCTS*GPWVIATTGAFNST
Trigger: TGTGCTGTTGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp TGTTTGAGTGGCCGCCTTCAATGTGCTCCTCGCGCCAGAAGGGCCTaGGGAAGCTTAGGAACACCTTGGTGGCCGGCACGTAGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: CLSGRLQCAPRARRA*GSLGTPWWPARSAA
Trigger: GGCTGCACTACGTGCCGGCCACCAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp CCACCCAGCCGTGCGGGTAGGCGGTGTGCTCGCCGGCAAAGTAGATaGGGCCATAAGGGACCGTCCAGTCATCCTTTTCGGTTTGCCAGA +
Preference number: 1 (lower is better)
Translates to: PPSRAGRRCARRQSR*GHKGPSSHPFRFAR
Trigger: TCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTTATGGCCGCATCTACTTTGCCGGCGAGCACACCGCCTACCCGCACGGCTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp ATCATGCGCGACGGGCGATCGGTGTTTGAGTGGCCGCCTTCAATGTaGTCCTCGCGCCAGAAGGGCCTGCGGAAGCTTAGGAACACCTTG +
Preference number: 1 (lower is better)
Translates to: IMRDGRSVFEWPPSM*SSRQKGLRKLRNTL
Trigger: CAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp GGGTCGTGTTTTGGAGAGATAACTGGCCTTGGACTGGAGGGTGGCTaGCTTCTTCCTTTGCCAGGTCATGCGAGGGGCTGCTGGCCACCC +
Preference number: 1 (lower is better)
Translates to: GSCFGEITGLGLEGG*LLPLPGHARGCWPP
Trigger: GGGTGGCCAGCAGCCCCTCGCATGACCTGGCAAAGGAAGAAGGCAGCCACCCTCCAGTCCAAGGCCAGTTATCTCTCCAAAACACGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 90 bp CGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTCGTACTaGGTGAACTTGGTCAGGTTGAGCCCCAGGCCCTGGCAGAGCTTG +
Preference number: 1 (lower is better)
Translates to: RSFTSCTSVHVFLSY*VNLVRLSPRPWQSL
Trigger: CAAGCTCTGCCAGGGCCTGGGGCTCAACCTGACCAAGTTCACCCAGTACGACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 90 bp GCAAGGCGTAGCCCAGCTTCTCGGGCACCTTCTCCACCACATAGTTaGGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTCGT +
Preference number: 1 (lower is better)
Translates to: ARRSPASRAPSPPHS*AASLRAPPSTCSCR
Trigger: ACGACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTATGTGGTGGAGAAGGTGCCCGAGAAGCTGGGCTACGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR GCA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTACGTCTCCCAGAAGCTaGACGGCCGGCCGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCTSPRS*TAGRLR
Trigger: CCTGAGCCGGCCGGCCGTGCAGCTTCTGGGAGACGT...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR GCA 90 bp CGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCGCCCTCGCGGTCTCGATCTGCACGTaGACATCGTGCGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RCRRVRPRVRGQQQRALAVSICT*TSCGPW
Trigger: CCAGGGACCGCACGATGTGCACGTGCAGATCGAGAC...CGCGAGGGCGCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 90 bp TCGGGGCTGGCCGTGTCCGATGCAGGCCCCTTCCGGCTGTTGATCTaGATGGCGGCGCGCAGCGCCGACTTGACCGCCGTCTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: SGLAVSDAGPFRLLI*MAARSADLTAVSTQ
Trigger: CTGGGTGGAGACGGCGGTCAAGTCGGCGCTGCGCGCCGCCATCAAGATCAACAGCCGGAAGGGGCCTGCATCGGACACGGCCAGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp CCAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGACTGGAGTCTGTCGCTaGGGCAGCTGTGGGCCCGGA +
Preference number: 2 (lower is better)
Translates to: PTLDDAGAVPELAHDRPVTGVCR*GSCGPG
Trigger: TCCGGGCCCACAGCTGCCTCAGCGACAGACTCCAGT...CACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp GCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCCGGGCGATCGGTGTTTaGGTGGCCGCCTTCAATGTG +
Preference number: 2 (lower is better)
Translates to: AGERCRRVRPRVRGQQQRRAIGV*VAAFNV
Trigger: CACATTGAAGGCGGCCACTCAAACACCGATCGCCCG...GCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp CCTCGCGCCAGAAGGGCCTGCGGAAGCTTAGGAACACCTTGGTGGCCGGCACGTTCGCTGAGGCAGCTGTaGGCCCGGAGGGCCTCGGCG +
Preference number: 2 (lower is better)
Translates to: PRARRACGSLGTPWWPARSLRQL*ARRASA
Trigger: CGCCGAGGCCCTCCGGGCCCACAGCTGCCTCAGCGA...ACGTGCCGGCCACCAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 90 bp TGTACCACAAAGCCACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTaGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: CTTKPPWLCWSSAQR*TTPVPSQSWRTTGP
Trigger: CGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp ACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCGTCCCAACATCGTGCGGTCCCTaGGTCATCGCCACCACGGGC +
Preference number: 2 (lower is better)
Translates to: TLAVLVLRPTLDDAGAVPTSCGP*VIATTG
Trigger: GCCCGTGGTGGCGATGACCCAGGGACCGCACGATGT...TGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp GCGAACGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCGCCCTTAGGAACACCTTGGTaGCCGGCACGTAGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: ANAAAASDHVYEASSSAPLGTPW*PARSAA
Trigger: GGCTGCACTACGTGCCGGCCACCAAGGTGTTCCTAA...GGGCGCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp CGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCAATTGTGTCCAGCATCGCTaGGCACCTTGGCGGCCACCA +
Preference number: 2 (lower is better)
Translates to: RLTTPVPSQSWRTTGPCNCVQHR*APWRPP
Trigger: TGGTGGCCGCCAAGGTGCTCAGCGATGCTGGACACA...ATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 90 bp CGCGCGGCGGCGGGTAGAAAATCATGCGCGACGGGCGATCGGTGTTaGAGTGGCCGCCTTCAATGTGCTCCTCGCGCCAGAAGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: RAAAGRKSCATGDRC*SGRLQCAPRARRAC
Trigger: GCAGGCCCTTCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGCCGCCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp AACAGCACAAGCCCGGACAGCGAGCTCAGCAGCGCGCGCGGCAGCAGGTCCCAGTTGAGCCCCAGGCCCTaGCAGAGCTTGTGGAGGATC +
Preference number: 2 (lower is better)
Translates to: NSTSPDSELSSARGSRSQLSPRP*QSLWRI
Trigger: GATCCTCCACAAGCTCTGCCAGGGCCTGGGGCTCAA...CTGGGACCTGCTGCCGCGCGCGCTGCTGAGCTCGCTGTCCGGGCTTGTGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp TTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCAATGCCGGGCCTCGGCGAAGCTaGGATAGAAGAAGCCATCCT +
Preference number: 2 (lower is better)
Translates to: LTTPVPSQSWRTTGPCNAGPRRS*DRRSHP
Trigger: AGGATGGCTTCTTCTATCTCAGCTTCGCCGAGGCCC...GGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp CGCCGGTCCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCTGCCTCCAGGATGGTaGCCTTGTGTCCAGCATCGC +
Preference number: 2 (lower is better)
Translates to: RRSARRQQHHVGLQHLQILPPGW*PCVQHR
Trigger: GCGATGCTGGACACAAGGTCACCATCCTGGAGGCAG...AATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGGACCGGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp CCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCCGCGCCTTGTGGAGGATCCTGTaGGAGCTGGGCATGCGCATG +
Preference number: 2 (lower is better)
Translates to: PLAVSSTTSAFSTFRFRALWRIL*ELGMRM
Trigger: CATGCGCATGCCCAGCTCTCACAGGATCCTCCACAA...GGCGCGGAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR GCA 90 bp AGCGGCGGCGAGAAGGTGATGCGCTTCACCGCCGGTCCGCTCGCCGTCAGCAGCCCCGATCCTGTTATCTaGCTCCAGGATGGTGACCTT +
Preference number: 2 (lower is better)
Translates to: SGGEKVMRFTAGPLAVSSPDPVI*LQDGDL
Trigger: AAGGTCACCATCCTGGAGGCAGATAACAGGATCGGG...GCTGCTGACGGCGAGCGGACCGGCGGTGAAGCGCATCACCTTCTCGCCGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp TCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTTCAATGTCTTCGGGCGAGTaGCCCTTTTCCTGGGGACGC +
Preference number: 2 (lower is better)
Translates to: SARAHRAVPGSSPPRARSMSSGE*PFSWGR
Trigger: GCGTCCCCAGGAAAAGGGCCACTCGCCCGAAGACAT...TGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR GCA 90 bp TCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCCCCAGCCACCCACGATaGGGCTGTACTGGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: SDSAPGERSRSARAHRAVPSHPR*GCTGVC
Trigger: ACAGACTCCAGTACAGCCGCATCGTGGGTGGCTGGG...GACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp GTCCGATGCAGGCCCCTTCCGGCTGTTGATCTTGATGGCGGCGCGCAGCGCCGACGATCGGTGTTTGAGTaGCCGCCTTCAATGTGCTCC +
Preference number: 2 (lower is better)
Translates to: VRCRPLPAVDLDGGAQRRRSVFE*PPSMCS
Trigger: GGAGCACATTGAAGGCGGCCACTCAAACACCGATCG...TCGGCGCTGCGCGCCGCCATCAAGATCAACAGCCGGAAGGGGCCTGCATCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp ATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTTCAACAGCACAAGCCCACCACAATCACCCTCTaGGGCTTCAGGGTCCGATTG +
Preference number: 2 (lower is better)
Translates to: IVRSLGHRHHGRVQQHKPTTITL*GFRVRL
Trigger: CAATCGGACCCTGAAGCCCCAGAGGGTGATTGTGGT...GGGCTTGTGCTGTTGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp TCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCACGATGCGGCTGTACTaGAGTCTGTCGCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SDSAPGERSRSARAHRAVTMRLY*SLSLRQ
Trigger: CTGCCTCAGCGACAGACTCCAGTACAGCCGCATCGT...GACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR GCA 90 bp GCGGGTAGAAAATCATGCGCGACGGGCGATCGGTGTTTGAGTGGCCGCCTTCAATGTGAGAGCTGGGCATaGGCATGGCTCCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: AGRKSCATGDRCLSGRLQCESWA*AWLPAP
Trigger: GGGAGCTGGGAGCCATGCGCATGCCCAGCTCTCACA...TTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 90 bp AAAGTAGATGCGGCCATAAGGGACCGTCCAGTCATCCTTTTCGGTTaGCCAGAGCGCCGGCGGCTGTACCACAAAGCCACCCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: KVDAAIRDRPVILFG*PERRRLYHKATLAV
Trigger: CACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTTATGGCCGCATCTACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR TCA 90 bp CCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACTTCTTCATCGCTCTGGTCCCGGTAGGTaGAGATGCGGCCCCCGATCC +
Preference number: 2 (lower is better)
Translates to: PLPEKIFQERVPFKLLHRSGPGR*RCGPRS
Trigger: GGATCGGGGGCCGCATCTTCACCTACCGGGACCAGA...GCGATGAAGAAGTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp AATGCGAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATAACTGGCCTTGGACTGAGCTGGGCATGCGCATaGCTCCCAGCTCCCCAATCC +
Preference number: 2 (lower is better)
Translates to: NARSSCGSCFGEITGLGLSWACA*LPAPQS
Trigger: GGATTGGGGAGCTGGGAGCCATGCGCATGCCCAGCT...CAGTCCAAGGCCAGTTATCTCTCCAAAACACGACCCACACGAGGACCTCGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR GCA 90 bp CGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACCGCAGCTTCACTTCGTaGACCTCCGTCCACGTGTTC +
Preference number: 2 (lower is better)
Translates to: RLRFPSPRRYSKSVCLSNRSFTS*TSVHVF
Trigger: GAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCG...GTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CCA 90 bp AATGCGAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATAACTGGCCTTGGACTGGTGTTCTTGTCGTACTaGGTGAACTTGGTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: NARSSCGSCFGEITGLGLVFLSY*VNLVRL
Trigger: CAACCTGACCAAGTTCACCCAGTACGACAAGAACAC...CAGTCCAAGGCCAGTTATCTCTCCAAAACACGACCCACACGAGGACCTCGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp GCGCAACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTaGCGCCGCGTCCGACCACGTGTACGAGGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: AQRLFPAQAGER*RRVRPRVRGQQ
Trigger: CTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGTTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp GCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCAATaGCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTC +
Preference number: 3 (lower is better)
Translates to: AVPELAHDRPVQ*RHVVERQAQRL
Trigger: GAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp CCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTaGAATGCCGCCACGTCGTCGAGCGCCAAGCGCAAC +
Preference number: 3 (lower is better)
Translates to: PVPSQSWRTTGP*NAATSSSAKRN
Trigger: GTTGCGCTTGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp GCCCAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTaGCGCACGACAGGCCCGTGCAATGCCGCCACGTCG +
Preference number: 3 (lower is better)
Translates to: AQRLTTPVPSQS*RTTGPCNAATS
Trigger: CGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR TCA 72 bp AGCCACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTTaGCGACGCCGGTGCCGTCCCAGAGCTGGCGCACGA +
Preference number: 3 (lower is better)
Translates to: SHPGCAGPPPNA*RRRCRPRAGAR
Trigger: TCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp GCCGGCGGCTGTACCACAAAGCCACCCTGGCTGTGCTaGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCG +
Preference number: 3 (lower is better)
Translates to: AGGCTTKPPWLC*SSAQRLTTPVP
Trigger: CGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CAA 90 bp GTCCGATGCAGGCCCCTTCCGGCTGTTGATCTTGATGGCGGCGCGCAGCGCCGATCCTCCGCCCAACGCTaGACGACGCCGGTGCCGTCC +
Preference number: 3 (lower is better)
Translates to: VRCRPLPAVDLDGGAQRRSSAQR*TTPVPS
Trigger: GGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGA...TCGGCGCTGCGCGCCGCCATCAAGATCAACAGCCGGAAGGGGCCTGCATCGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR TCA 72 bp AGCCACCCACGATGCGGCTGTACTGGAGTCTGTCGCTaGGGCAGCTGTGGGCCCGGAGGGCCTCGGCGAAGC +
Preference number: 3 (lower is better)
Translates to: SHPRCGCTGVCR*GSCGPGGPRRS
Trigger: GCTTCGCCGAGGCCCTCCGGGCCCACAGCTGCCTCAGCGACAGACTCCAGTACAGCCGCATCGTGGGTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp GCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTaGGGTCCCTGGGTCATCGCCACCACGGGCGCGTTC +
Preference number: 3 (lower is better)
Translates to: AGGEVSICTCTS*GPWVIATTGAF
Trigger: GAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp GCAGCGCGCCCTCGCGCGGCGGCGGGTAGAAAATCATaGGCGACGGGCGATCGGTGTTTGAGTGGCCGCCTT +
Preference number: 3 (lower is better)
Translates to: AARPRAAAGRKS*ATGDRCLSGRL
Trigger: AAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGCCGCCGCGCGAGGGCGCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp AGCGCCGGCGGCTGTACCACAAAGCCACCCTGGCTGTaGTGGTCCTCCGCCCAACGCTTGACGACGCCGGTG +
Preference number: 3 (lower is better)
Translates to: SAGGCTTKPPWL*WSSAQRLTTPV
Trigger: CACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp TGCCAGAGCGCCGGCGGCTGTACCACAAAGCCACCCTaGCTGTGCTGGTCCTCCGCCCAACGCTTGACGACG +
Preference number: 3 (lower is better)
Translates to: CQSAGGCTTKPP*LCWSSAQRLTT
Trigger: CGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGTACAGCCGCCGGCGCTCTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CAA 90 bp CGATCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTGTGAACTTGGTCAGGTaGAGCCCCAGGCCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: RSARAHRAVPGSSPPRARVNLVR*SPRPWQ
Trigger: CTGCCAGGGCCTGGGGCTCAACCTGACCAAGTTCAC...ACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp AGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACGTaGACATCGTGCGGTCCCTGGGTCATCGCCACCACG +
Preference number: 3 (lower is better)
Translates to: RFRAGGEVSICT*TSCGPWVIATT
Trigger: CGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp GCCAGAAGGGCCTGCGGAAGCTTAGGAACACCTTGGTaGCCGGCACGTAGTGCAGCCTCCGCAGCGCCTCCT +
Preference number: 3 (lower is better)
Translates to: ARRACGSLGTPW*PARSAASAAPP
Trigger: AGGAGGCGCTGCGGAGGCTGCACTACGTGCCGGCCACCAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp AAGAAGCCATCCTCGGACATCACGTCTCCCAGAAGCTaGACGGCCGGCCGGCTCAGGTTCCCCTCCCCGAGA +
Preference number: 3 (lower is better)
Translates to: KKPSSDITSPRS*TAGRLRFPSPR
Trigger: TCTCGGGGAGGGGAACCTGAGCCGGCCGGCCGTGCAGCTTCTGGGAGACGTGATGTCCGAGGATGGCTTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp ACCTTCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTaGACGTGCACATCGTGCGGTCCCTGGGTCATCGCC +
Preference number: 3 (lower is better)
Translates to: TFRFRAGGEVSI*TCTSCGPWVIA
Trigger: GGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGAAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp CTGGCCTTGGACTGGAGGGTGGCTGCCTTCTTCCTTTaGCAGGTCATGCGAGGGGCTGCTGGCCACCCCATG +
Preference number: 3 (lower is better)
Translates to: LALDWRVAAFFL*QVMRGAAGHPM
Trigger: CATGGGGTGGCCAGCAGCCCCTCGCATGACCTGGCAAAGGAAGAAGGCAGCCACCCTCCAGTCCAAGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CAA 90 bp CAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCTCCAGGATGGTGACCTaGTGTCCAGCATCGCTGAGC +
Preference number: 3 (lower is better)
Translates to: QCRHVVERQAQRLFPAQASRMVT*CPASLS
Trigger: GCTCAGCGATGCTGGACACAAGGTCACCATCCTGGA...GGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp GACGGGCGATCGGTGTTTGAGTGGCCGCCTTCAATGTaGTCCTCGCGCCAGAAGGGCCTGCGGAAGCTTAGG +
Preference number: 3 (lower is better)
Translates to: DGRSVFEWPPSM*SSRQKGLRKLR
Trigger: CCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp GAGGTCTCGATCTGCACGTGCACATCGTGCGGTCCCTaGGTCATCGCCACCACGGGCGCGTTCAACAGCACA +
Preference number: 3 (lower is better)
Translates to: EVSICTCTSCGP*VIATTGAFNST
Trigger: TGTGCTGTTGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CAA 90 bp CCACCACATAGTTGCGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTGCATCGCTGAGCACCTaGGCGGCCACCAGCCCGGCC +
Preference number: 3 (lower is better)
Translates to: PPHSCAASLRAPPSTCSCASLST*AATSPA
Trigger: GGCCGGGCTGGTGGCCGCCAAGGTGCTCAGCGATGC...ACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTATGTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CAA 90 bp TCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTTCATCGTACTGGGTGAACTaGGTCAGGTTGAGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: SARAHRAVPGSSPPRARSSYWVN*VRLSPR
Trigger: CCTGGGGCTCAACCTGACCAAGTTCACCCAGTACGA...TGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR TCA 72 bp GCTCCCCAATCCAGCCCGTGTTCTGGTCCCGGTAGGTaGAGATGCGGCCCCCGATCCTGTTATCTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: APQSSPCSGPGR*RCGPRSCYLPP
Trigger: TGGAGGCAGATAACAGGATCGGGGGCCGCATCTTCACCTACCGGGACCAGAACACGGGCTGGATTGGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp CGTGCGGGTAGGCGGTGTGCTCGCCGGCAAAGTAGATaGGGCCATAAGGGACCGTCCAGTCATCCTTTTCGG +
Preference number: 3 (lower is better)
Translates to: RAGRRCARRQSR*GHKGPSSHPFR
Trigger: CCGAAAAGGATGACTGGACGGTCCCTTATGGCCGCATCTACTTTGCCGGCGAGCACACCGCCTACCCGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR TCA 72 bp CGGGTAGAAAATCATGCGCGACGGGCGATCGGTGTTTaGGTGGCCGCCTTCAATGTGCTCCTCGCGCCAGAA +
Preference number: 3 (lower is better)
Translates to: RVENHARRAIGV*VAAFNVLLAPE
Trigger: TTCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR GCA 72 bp AGCCCAGCTTCTCGGGCACCTTCTCCACCACATAGTTaGGCAGCTTCACTTCGTGCACCTCCGTCCACGTGT +
Preference number: 3 (lower is better)
Translates to: SPASRAPSPPHS*AASLRAPPSTC
Trigger: ACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTATGTGGTGGAGAAGGTGCCCGAGAAGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp ACTTCGTGCACCTCCGTCCACGTGTTCTTGTCGTACTaGGTGAACTTGGTCAGGTTGAGCCCCAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: TSCTSVHVFLSY*VNLVRLSPRPW
Trigger: CCAGGGCCTGGGGCTCAACCTGACCAAGTTCACCCAGTACGACAAGAACACGTGGACGGAGGTGCACGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CCA 72 bp GAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATAACTaGCCTTGGACTGGAGGGTGGCTGCCTTCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: EVLVWVVFWRDN*PWTGGWLPSSF
Trigger: AAAGGAAGAAGGCAGCCACCCTCCAGTCCAAGGCCAGTTATCTCTCCAAAACACGACCCACACGAGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR-3UTR CAA 90 bp CGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACTCCGTCCACGTGTTCTaGTCGTACTGGGTGAACTTG +
Preference number: 3 (lower is better)
Translates to: RLRFPSPRRYSKSVCLSNSVHVF*SYWVNL
Trigger: CAAGTTCACCCAGTACGACAAGAACACGTGGACGGA...GTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTTCGCTGAGGCAGCTGTaGGCCCGGAGGGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCSLRQL*ARRASA
Trigger: CGCCGAGGCCCTCCGGGCCCACAGCTGCCTCAGCGA...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp GCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCAAGCCACCCTGGCTGTaGTGGTCCTCCGCCCAACGC +
Preference number: 4 (lower is better)
Translates to: AGERCRRVRPRVRGQQQRKPPWL*WSSAQR
Trigger: GCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTT...GCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp GCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCCCACCCTGGCTGTGCTaGTCCTCCGCCCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: AGERCRRVRPRVRGQQQRPPWLC*SSAQRL
Trigger: CAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGG...GCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp GCGAACGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCGCCCGCTTCAGGGTCCGATTaGGCCCCCAGGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: ANAAAASDHVYEASSSAPASGSD*APRSPP
Trigger: AGGTGGTGACCTGGGGGCTCAATCGGACCCTGAAGC...GGGCGCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCGCCCTCGCGCGCGCCAGAAGGGCCTaGGGAAGCTTAGGAACACCT +
Preference number: 4 (lower is better)
Translates to: RCRRVRPRVRGQQQRALARARRA*GSLGTP
Trigger: AGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCG...CGCGAGGGCGCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CTTGGTGGCCGGCACGTAGTGCAGCCTCCGCAGCGCCTCCTGCATGTGGCGGGGGACAGGCCCGTGCAATaGCGCCACGTCGTCGAGCGC +
Preference number: 4 (lower is better)
Translates to: LGGRHVVQPPQRLLHVAGDRPVQ*RHVVER
Trigger: GCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTC...CCCCGCCACATGCAGGAGGCGCTGCGGAGGCTGCACTACGTGCCGGCCACCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 72 bp AAGCCACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTaGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACG +
Preference number: 4 (lower is better)
Translates to: KPPWLCWSSAQR*TTPVPSQSWRT
Trigger: CGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGTGGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTTCTGGTCCCGGTAGGTaGAGATGCGGCCCCCGATCC +
Preference number: 4 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCSGPGR*RCGPRS
Trigger: GGATCGGGGGCCGCATCTTCACCTACCGGGACCAGA...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp CGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGCGCAGCGCCGACTTaGCCGCCGTCTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RRGRGLDLHVHIVRSLGHRAAPT*PPSPPS
Trigger: GCTGGGTGGAGACGGCGGTCAAGTCGGCGCTGCGCG...ATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CTTGGTGGCCGGCACGTAGTGCAGCCTCCGCAGCGCCTCCTGCATGTGGCGGGGGCTGGCCGTGTCCGATaGAGGCCCCTTCCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGGRHVVQPPQRLLHVAGAGRVR*RPLPAV
Trigger: AACAGCCGGAAGGGGCCTGCATCGGACACGGCCAGC...CCCCGCCACATGCAGGAGGCGCTGCGGAGGCTGCACTACGTGCCGGCCACCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp ATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTTCAACAGCACAAGCCCCGTGCCCCTCGGGGCTaGCCGTGTCCGATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IVRSLGHRHHGRVQQHKPRAPRG*PCPMQA
Trigger: GGCCTGCATCGGACACGGCCAGCCCCGAGGGGCACG...GGGCTTGTGCTGTTGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp GTGGCGGGGCAGCGGCGGCGAGAAGGTGATGCGCTTCACCGCCGGTCCGCTCGCCCCAGGTCACCACCTTaGGCAGCTGCTCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: VAGQRRREGDALHRRSARPRSPP*AAAHSQ
Trigger: CTGACTATGAGCAGCTGCTCAAGGTGGTGACCTGGG...GCGAGCGGACCGGCGGTGAAGCGCATCACCTTCTCGCCGCCGCTGCCCCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp CGTCGGCCTTCAGCACCTTCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACCTCCGCCCAACGCTTaGCGACGCCGGTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RRPSAPSDSAPGERSRSAPPPNA*RRRCRP
Trigger: GGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGG...TGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGAAGGTGCTGAAGGCCGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp GCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTACGAGGCCAGCAGCAGCGCCGCAGCTTCACTTCGTaGACCTCCGTCCACGTGTTC +
Preference number: 4 (lower is better)
Translates to: AGERCRRVRPRVRGQQQRRSFTS*TSVHVF
Trigger: GAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCG...GCGCTGCTGCTGGCCTCGTACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCGTCTCCACCCAGCCGTGCGGGTAGGCGGTGTGCTCGCCGGCAAAGTAGATGCACGTCTCCCAGAAGCTaGACGGCCGGCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSPPSRAGRRCARRQSRCTSPRS*TAGRLR
Trigger: CCTGAGCCGGCCGGCCGTGCAGCTTCTGGGAGACGT...GCATCTACTTTGCCGGCGAGCACACCGCCTACCCGCACGGCTGGGTGGAGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTTGGCCGCCTTCAATGTaGTCCTCGCGCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCWPPSM*SSRQKG
Trigger: GCCCTTCTGGCGCGAGGAGCACATTGAAGGCGGCCA...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCCGCGCCCGCACGACAGGCCCGTaGAATGCCGCCACGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PLAVSSTTSAFSTFRFRARTTGP*NAATSS
Trigger: CGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCG...GGCGCGGAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CTTGGTGGCCGGCACGTAGTGCAGCCTCCGCAGCGCCTCCTGCATGTGGCGGGGTTGCATGGCTGCCTCTaGGGGGCTCTCTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LGGRHVVQPPQRLLHVAGLHGCL*GALSAP
Trigger: GGGTGCTGAGAGAGCCCCCCAGAGGCAGCCATGCAA...CCCCGCCACATGCAGGAGGCGCTGCGGAGGCTGCACTACGTGCCGGCCACCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 72 bp GCCGTGTCCGATGCAGGCCCCTTCCGGCTGTTGATCTaGATGGCGGCGCGCAGCGCCGACTTGACCGCCGTC +
Preference number: 4 (lower is better)
Translates to: AVSDAGPFRLLI*MAARSADLTAV
Trigger: GACGGCGGTCAAGTCGGCGCTGCGCGCCGCCATCAAGATCAACAGCCGGAAGGGGCCTGCATCGGACACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 72 bp GGGCTGGCCGTGTCCGATGCAGGCCCCTTCCGGCTGTaGATCTTGATGGCGGCGCGCAGCGCCGACTTGACC +
Preference number: 4 (lower is better)
Translates to: GLAVSDAGPFRL*ILMAARSADLT
Trigger: GGTCAAGTCGGCGCTGCGCGCCGCCATCAAGATCAACAGCCGGAAGGGGCCTGCATCGGACACGGCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp AACAGCACAAGCCCGGACAGCGAGCTCAGCAGCGCGCGCGGCAGCAGGTCCCAGGGGCCAATGGGGCCATaGCTCTCGGTGGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: NSTSPDSELSSARGSRSQGPMGP*LSVGDG
Trigger: ACCATCTCCCACCGAGAGTCATGGCCCCATTGGCCC...CTGGGACCTGCTGCCGCGCGCGCTGCTGAGCTCGCTGTCCGGGCTTGTGCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCCAGAGCTGGCGCACGACAGGCCCGTGCAATGCCGCCACGTCGTCGAGCGCCACCCAGCCACCCACGATaGGGCTGTACTGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRAGARQARAMPPRRRAPPSHPR*GCTGVC
Trigger: ACAGACTCCAGTACAGCCGCATCGTGGGTGGCTGGG...TGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp GGCCACCAGCCCGGCCACACCAGCGCCAACCACAATCACCCTCTGGGGCTTCAGCATGCGAGGGGCTGCTaGCCACCCCATGCACATGCC +
Preference number: 4 (lower is better)
Translates to: GHQPGHTSANHNHPLGLQHARGC*PPHAHA
Trigger: GGCATGTGCATGGGGTGGCCAGCAGCCCCTCGCATG...CTGAAGCCCCAGAGGGTGATTGTGGTTGGCGCTGGTGTGGCCGGGCTGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp CCCAGAGCTGGCGCACGACAGGCCCGTGCAATGCCGCCACGTCGTCGAGCGCCATTGTGGAGGATCCTGTaGGAGCTGGGCATGCGCATG +
Preference number: 4 (lower is better)
Translates to: PRAGARQARAMPPRRRAPLWRIL*ELGMRM
Trigger: CATGCGCATGCCCAGCTCTCACAGGATCCTCCACAA...TGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp CCAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGGGGCCTCGGCGAAGCTaGGATAGAAGAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: PTLDDAGAVPELAHDRPVGPRRS*DRRSHP
Trigger: AGGATGGCTTCTTCTATCTCAGCTTCGCCGAGGCCC...CACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp AACAGCACAAGCCCGGACAGCGAGCTCAGCAGCGCGCGCGGCAGCAGGTCCCAGGTCTCGATCTGCACGTaGACATCGTGCGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NSTSPDSELSSARGSRSQVSICT*TSCGPW
Trigger: CCAGGGACCGCACGATGTGCACGTGCAGATCGAGAC...CTGGGACCTGCTGCCGCGCGCGCTGCTGAGCTCGCTGTCCGGGCTTGTGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCCAGAGCTGGCGCACGACAGGCCCGTGCAATGCCGCCACGTCGTCGAGCGCCAGGAGAGGTCTCGATCTaGACGTGCACATCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PRAGARQARAMPPRRRAPGEVSI*TCTSCG
Trigger: ACCGCACGATGTGCACGTGCAGATCGAGACCTCTCC...TGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCGTGGATGGGACAAGGTaGGTTTCACGCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: QRLTTPVPSQSWRTTGPCVDGTR*VSRLRS
Trigger: AGAGCGCAGGCGTGAAACCCACCTTGTCCCATCCAC...GCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp GGCCACCAGCCCGGCCACACCAGCGCCAACCACAATCACCCTCTGGGGCTTCAGAGCTGGGCATGCGCATaGCTCCCAGCTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: GHQPGHTSANHNHPLGLQSWACA*LPAPQS
Trigger: GGATTGGGGAGCTGGGAGCCATGCGCATGCCCAGCT...CTGAAGCCCCAGAGGGTGATTGTGGTTGGCGCTGGTGTGGCCGGGCTGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp ACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCGTCCCATTGAGCCCCAGGCCCTaGCAGAGCTTGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: TLAVLVLRPTLDDAGAVPLSPRP*QSLWRI
Trigger: GATCCTCCACAAGCTCTGCCAGGGCCTGGGGCTCAA...TGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CGGCCGGCCGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCACATCGTGCGGTCCCTaGGTCATCGCCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: RPAGSGSPPREDIPRACATSCGP*VIATTG
Trigger: GCCCGTGGTGGCGATGACCCAGGGACCGCACGATGT...GGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCGGCCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp CAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCCTGCCTCCAGGATGGTaGCCTTGTGTCCAGCATCGC +
Preference number: 4 (lower is better)
Translates to: QCRHVVERQAQRLFPAQALPPGW*PCVQHR
Trigger: GCGATGCTGGACACAAGGTCACCATCCTGGAGGCAG...GGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp GCCGGTCCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCTGTGAGAGCTGGGCATaGGCATGGCTCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGPLAVSSTTSAFSTFRFCESWA*AWLPAP
Trigger: GGGAGCTGGGAGCCATGCGCATGCCCAGCTCTCACA...GAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGGACCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCTCGCGCCAGAAGGGCCTGCGGAAGCTTAGGAACACCTTGGTGGCCGGCACGTTGCACGTGCACATCGTaGGGTCCCTGGGTCATCGCC +
Preference number: 4 (lower is better)
Translates to: PRARRACGSLGTPWWPARCTCTS*GPWVIA
Trigger: GGCGATGACCCAGGGACCGCACGATGTGCACGTGCA...ACGTGCCGGCCACCAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp GGCCACCAGCCCGGCCACACCAGCGCCAACCACAATCACCCTCTGGGGCTTCAGCGCCGGCAAAGTAGATaGGGCCATAAGGGACCGTCC +
Preference number: 4 (lower is better)
Translates to: GHQPGHTSANHNHPLGLQRRQSR*GHKGPS
Trigger: GGACGGTCCCTTATGGCCGCATCTACTTTGCCGGCG...CTGAAGCCCCAGAGGGTGATTGTGGTTGGCGCTGGTGTGGCCGGGCTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCCCATGCACATGCCCCTaGCCCTCCATGTCAGATGCG +
Preference number: 4 (lower is better)
Translates to: QCRHVVERQAQRLFPAQAPCTCP*PSMSDA
Trigger: CGCATCTGACATGGAGGGGCAGGGGCATGTGCATGG...GGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CGGCCGGCCGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCGCCACCCCATGCACATaGCCCTGCCCCTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: RPAGSGSPPREDIPRACAATPCT*PCPSMS
Trigger: TGACATGGAGGGGCAGGGGCATGTGCATGGGGTGGC...GGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCGGCCGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp GGCGCACGACAGGCCCGTGCAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGACCACAATCACCCTCTaGGGCTTCAGGGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: GARQARAMPPRRRAPSATTTITL*GFRVRL
Trigger: CAATCGGACCCTGAAGCCCCAGAGGGTGATTGTGGT...CGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTGCACGGGCCTGTCGTGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp GCCGGTCCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCCGGGCGATCGGTGTTTaGGTGGCCGCCTTCAATGTG +
Preference number: 4 (lower is better)
Translates to: AGPLAVSSTTSAFSTFRFRAIGV*VAAFNV
Trigger: CACATTGAAGGCGGCCACTCAAACACCGATCGCCCG...GAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGGACCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCCCCGATCCTGTTATCTaGCTCCAGGATGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: QRLTTPVPSQSWRTTGPCPDPVI*LQDGDL
Trigger: AAGGTCACCATCCTGGAGGCAGATAACAGGATCGGG...GCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp TCAGATTCCGCGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCTCCTTTGCCAGGTCATaGGAGGGGCTGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SDSAPGERSRSARAHRAVSFARS*EGLLAT
Trigger: GGTGGCCAGCAGCCCCTCGCATGACCTGGCAAAGGA...GACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCGCGGAATCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CCTCGCGCCAGAAGGGCCTGCGGAAGCTTAGGAACACCTTGGTGGCCGGCACGTATGTCTTCGGGCGAGTaGCCCTTTTCCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: PRARRACGSLGTPWWPARMSSGE*PFSWGR
Trigger: GCGTCCCCAGGAAAAGGGCCACTCGCCCGAAGACAT...ACGTGCCGGCCACCAAGGTGTTCCTAAGCTTCCGCAGGCCCTTCTGGCGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CCAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGTGCGAGGTCCTCGTGTaGGTCGTGTTTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PTLDDAGAVPELAHDRPVCEVLV*VVFWRD
Trigger: ATCTCTCCAAAACACGACCCACACGAGGACCTCGCA...CACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CGATCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTCTTTCTGCAGCCCAGTaGCTTGAGGTCTTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RSARAHRAVPGSSPPRARLSAAQ*LEVFEG
Trigger: GCCCTCAAAGACCTCAAGGCACTGGGCTGCAGAAAG...ACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp TTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCAATGCCTGGGGTCAGAGCAGCTaGGAGGCTTTAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTTPVPSQSWRTTGPCNAWGQSS*EALKAS
Trigger: AGAGGCTTTTAAAGCCTCCCAGCTGCTCTGACCCCA...GGCATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCAGAGATAACTGGCCTTaGACTGGAGGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QCRHVVERQAQRLFPAQARDNWP*TGGWLP
Trigger: AGGCAGCCACCCTCCAGTCCAAGGCCAGTTATCTCT...GGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTCGGAATCAAGGTGAATaGTGGTGGCTTTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCRNQGE*WWLCPC
Trigger: ACAAGGACAAAGCCACCATCATTCACCTTGATTCCG...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp AAGGGACCGTCCAGTCATCCTTTTCGGTTTGCCAGAGCGCCGGCGGCTGTACCATGTGTCCAGCATCGCTaGGCACCTTGGCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KGPSSHPFRFARAPAAVPCVQHR*APWRPP
Trigger: TGGTGGCCGCCAAGGTGCTCAGCGATGCTGGACACA...TGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp GCGGGTAGAAAATCATGCGCGACGGGCGATCGGTGTTTGAGTGGCCGCCTTCAAACTGGAGTCTGTCGCTaGGGCAGCTGTGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: AGRKSCATGDRCLSGRLQTGVCR*GSCGPG
Trigger: TCCGGGCCCACAGCTGCCTCAGCGACAGACTCCAGT...TTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCAATTCTCCACCACATAGTTaGGCAGCTTCACTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: RLTTPVPSQSWRTTGPCNSPPHS*AASLRA
Trigger: TGCACGAAGTGAAGCTGCGCAACTATGTGGTGGAGA...ATTGCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCACCACATAGTTGCGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTCAAGCCGGCGAACGCTaGCGCCGCGTCCGACCACGT +
Preference number: 4 (lower is better)
Translates to: PPHSCAASLRAPPSTCSCQAGER*RRVRPR
Trigger: ACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTG...ACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTATGTGGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp AACAGCACAAGCCCGGACAGCGAGCTCAGCAGCGCGCGCGGCAGCAGGTCCCAGGACAGAAGTCATCGTTaGGCATGTGCGGAATCAAGG +
Preference number: 4 (lower is better)
Translates to: NSTSPDSELSSARGSRSQDRSHR*ACAESR
Trigger: CCTTGATTCCGCACATGCCCAACGATGACTTCTGTC...CTGGGACCTGCTGCCGCGCGCGCTGCTGAGCTCGCTGTCCGGGCTTGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCCTCTCTCAGCACCCATaGCCTTTATGGTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QCRHVVERQAQRLFPAQALSQHP*PLWLAQ
Trigger: CTGGGCTAACCATAAAGGCCATGGGTGCTGAGAGAG...GGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 72 bp GCGGCCATAAGGGACCGTCCAGTCATCCTTTTCGGTTaGCCAGAGCGCCGGCGGCTGTACCACAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: AAIRDRPVILFG*PERRRLYHKAT
Trigger: GGTGGCTTTGTGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTTATGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR TCA 90 bp ATAGTTGCGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTCGTACTGGCGGCGGCGAGAAGGTaGTGCGCTTCACCGCCGGTC +
Preference number: 4 (lower is better)
Translates to: IVAQLHFVHLRPRVLVVLAAARR*CASPPV
Trigger: GACCGGCGGTGAAGCGCATCACCTTCTCGCCGCCGC...CAGTACGACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTTCATCGTTGGGCATGTaGGGAATCAAGGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCSSLGM*GIKVND
Trigger: ATCATTCACCTTGATTCCGCACATGCCCAACGATGA...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp GGGGACGCAAGGCGTAGCCCAGCTTCTCGGGCACCTTCTCCACCACATAGTTGCGCTGCCTTCTTCCTTTaGCAGGTCATGCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GDARRSPASRAPSPPHSCAAFFL*QVMRGA
Trigger: AGCCCCTCGCATGACCTGGCAAAGGAAGAAGGCAGC...GCAACTATGTGGTGGAGAAGGTGCCCGAGAAGCTGGGCTACGCCTTGCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCCGCGCCAGGTTGAACTCCAGCTaGGATGTCCTGATGTGGATG +
Preference number: 4 (lower is better)
Translates to: PLAVSSTTSAFSTFRFRARLNSS*DVLMWM
Trigger: CATCCACATCAGGACATCCCAGCTGGAGTTCAACCT...GGCGCGGAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CCGTCTCCACCCAGCCGTGCGGGTAGGCGGTGTGCTCGCCGGCAAAGTAGATGCTTTTGGAGAGATAACTaGCCTTGGACTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPPSRAGRRCARRQSRCFWRDN*PWTGGW
Trigger: CCACCCTCCAGTCCAAGGCCAGTTATCTCTCCAAAA...GCATCTACTTTGCCGGCGAGCACACCGCCTACCCGCACGGCTGGGTGGAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp GGGGACGCAAGGCGTAGCCCAGCTTCTCGGGCACCTTCTCCACCACATAGTTGCGGCCATGACTCTCGGTaGGAGATGGTGTTGCATGGC +
Preference number: 4 (lower is better)
Translates to: GDARRSPASRAPSPPHSCGHDSR*EMVLHG
Trigger: GCCATGCAACACCATCTCCCACCGAGAGTCATGGCC...GCAACTATGTGGTGGAGAAGGTGCCCGAGAAGCTGGGCTACGCCTTGCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 72 bp GCGGGTAGAAAATCATGCGCGACGGGCGATCGGTGTTaGAGTGGCCGCCTTCAATGTGCTCCTCGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGRKSCATGDRC*SGRLQCAPRAR
Trigger: TCTGGCGCGAGGAGCACATTGAAGGCGGCCACTCAAACACCGATCGCCCGTCGCGCATGATTTTCTACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp AAGGGACCGTCCAGTCATCCTTTTCGGTTTGCCAGAGCGCCGGCGGCTGTACCAGCGGGTAGAAAATCATaGGCGACGGGCGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: KGPSSHPFRFARAPAAVPAGRKS*ATGDRC
Trigger: ACACCGATCGCCCGTCGCGCATGATTTTCTACCCGC...TGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp AAGGGACCGTCCAGTCATCCTTTTCGGTTTGCCAGAGCGCCGGCGGCTGTACCATCATCCTTTTCGGTTTaGCAGAGCGCCGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGPSSHPFRFARAPAAVPSSFSV*QSAGGC
Trigger: ACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGA...TGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCCGCGCCGTGTTCTTGTCGTACTaGGTGAACTTGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLAVSSTTSAFSTFRFRAVFLSY*VNLVRL
Trigger: CAACCTGACCAAGTTCACCCAGTACGACAAGAACAC...GGCGCGGAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp AAGGGACCGTCCAGTCATCCTTTTCGGTTTGCCAGAGCGCCGGCGGCTGTACCATTAGGAACACCTTGGTaGCCGGCACGTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KGPSSHPFRFARAPAAVPLGTPW*PARSAA
Trigger: GGCTGCACTACGTGCCGGCCACCAAGGTGTTCCTAA...TGGTACAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACTTCTTCATCGCGTGCCGTCCCAGAGCTaGCGCACGACAGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PLPEKIFQERVPFKLLHRVPSQS*RTTGPC
Trigger: GCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCAC...GCGATGAAGAAGTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp TCCGTCCACGTGTTCTTGTCGTACTGGGTGAACTTGGTCAGGTTGAGCCCCAGGGAGGTGCAGGGCCAATaGGGCCATGACTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SVHVFLSYWVNLVRLSPREVQGQ*GHDSRW
Trigger: CCACCGAGAGTCATGGCCCCATTGGCCCTGCACCTC...CCTGGGGCTCAACCTGACCAAGTTCACCCAGTACGACAAGAACACGTGGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CGGCCGGCCGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTCCTCCACCTTCTCTaGACCTTGATTCAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RPAGSGSPPREDIPRACAFLHLL*TLIQSP
Trigger: AGGAGACTGAATCAAGGTCCAGAGAAGGTGGAGGAA...GGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCGGCCGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
3UTR CAA 72 bp CGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTaGTCGTACTGGGTGAACTTGGTCAGGTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSFTSCTSVHVF*SYWVNLVRLSP
Trigger: GGGGCTCAACCTGACCAAGTTCACCCAGTACGACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTCAAGCCTTGTTAGATCAGAGATaGCAAGTTCCTGATATTGGG +
Preference number: 4 (lower is better)
Translates to: QCRHVVERQAQRLFPAQALLDQR*QVPDIG
Trigger: CCCAATATCAGGAACTTGGCATCTCTGATCTAACAA...GGCTTGAGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp AGTGGCCCTTTTCCTGGGGACGCAAGGCGTAGCCCAGCTTCTCGGGCACCTTCTAGTCAGGATCCTGCATaGATTTCTCGAAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGPFPGDARRSPASRAPSSQDPA*ISRRGL
Trigger: AAGACCCCTTCGAGAAATGCATGCAGGATCCTGACT...AGAAGGTGCCCGAGAAGCTGGGCTACGCCTTGCGTCCCCAGGAAAAGGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp CGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACACGATGCGGCTGTACTaGAGTCTGTCGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLRFPSPRRYSKSVCLSNTMRLY*SLSLRQ
Trigger: CTGCCTCAGCGACAGACTCCAGTACAGCCGCATCGT...GTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR GCA 90 bp CCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACTTCTTCATCGCCGAAGGGGTCTTGGCTaGGTTCAGCCTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PLPEKIFQERVPFKLLHRRRGLG*VQPSSP
Trigger: AGGACTGGAAGGCTGAACGCAGCCAAGACCCCTTCG...GCGATGAAGAAGTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp AATGCGAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATAACTGGCCTTGGACTGCACCCATGGCCTTTATaGTTAGCCCAGGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: NARSSCGSCFGEITGLGLHPWPL*LAQDRS
Trigger: ACTTCTGTCCTGGGCTAACCATAAAGGCCATGGGTG...CAGTCCAAGGCCAGTTATCTCTCCAAAACACGACCCACACGAGGACCTCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp TTCCGAAAATACTTTAATGCGAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATAACCACAAAGCCACCCTaGCTGTGCTGGTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FRKYFNARSSCGSCFGEITTKPP*LCWSSA
Trigger: GGCGGAGGACCAGCACAGCCAGGGTGGCTTTGTGGT...TATCTCTCCAAAACACGACCCACACGAGGACCTCGCATTAAAGTATTTTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CCA 90 bp TTCCGAAAATACTTTAATGCGAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATACCTTGGACTGGAGGGTaGCTGCCTTCTTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: FRKYFNARSSCGSCFGEIPWTGG*LPSSFA
Trigger: GGCAAAGGAAGAAGGCAGCCACCCTCCAGTCCAAGG...TATCTCTCCAAAACACGACCCACACGAGGACCTCGCATTAAAGTATTTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp AACAGCACAAGCCCGGACAGCGAGCTCAGCAGCGCGCGCGGCAGCAGGTCCCAGTCCTCCGCCCAACGCTaGACGACGCCGGTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: NSTSPDSELSSARGSRSQSSAQR*TTPVPS
Trigger: GGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGA...CTGGGACCTGCTGCCGCGCGCGCTGCTGAGCTCGCTGTCCGGGCTTGTGCTGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CCGTCTCCACCCAGCCGTGCGGGTAGGCGGTGTGCTCGCCGGCAAAGTAGATGCGCGCGCAGCGCCGACTaGACCGCCGTCTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: PSPPSRAGRRCARRQSRCARSAD*TAVSTQ
Trigger: CTGGGTGGAGACGGCGGTCAAGTCGGCGCTGCGCGC...GCATCTACTTTGCCGGCGAGCACACCGCCTACCCGCACGGCTGGGTGGAGACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp GCCGGTCCGCTCGCCGTCAGCAGCACCACGTCGGCCTTCAGCACCTTCAGATTCGCATCGCTGAGCACCTaGGCGGCCACCAGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: AGPLAVSSTTSAFSTFRFASLST*AATSPA
Trigger: GGCCGGGCTGGTGGCCGCCAAGGTGCTCAGCGATGC...GAATCTGAAGGTGCTGAAGGCCGACGTGGTGCTGCTGACGGCGAGCGGACCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CGATCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTCGCCGCCGCCTCTCCTaGCTGCAGCCATGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: RSARAHRAVPGSSPPRARRRRLS*LQPWSE
Trigger: CTCACTCCATGGCTGCAGCAAGGAGAGGCGGCGGCG...ACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGATGTGCACGTGCAGATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp ATCGTGCGGTCCCTGGGTCATCGCCACCACGGGCGCGTTCAACAGCACAAGCCCTTCCGGCTGTTGATCTaGATGGCGGCGCGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: IVRSLGHRHHGRVQQHKPFRLLI*MAARSA
Trigger: GGCGCTGCGCGCCGCCATCAAGATCAACAGCCGGAA...GGGCTTGTGCTGTTGAACGCGCCCGTGGTGGCGATGACCCAGGGACCGCACGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCCCTGGGTCATCGGTGGGAGATGGTGTaGCATGGCTGCCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RRGRGLDLHVHIVRSLGHRWEMV*HGCLWG
Trigger: CCCCCAGAGGCAGCCATGCAACACCATCTCCCACCG...ATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CCAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGTTTCTCGAAGGGGTCTaGGCTGCGTTCAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PTLDDAGAVPELAHDRPVFLEGV*AAFSLP
Trigger: TGGAAGGCTGAACGCAGCCAAGACCCCTTCGAGAAA...CACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CGCCGGGGGAGAGGTCTCGATCTGCACGTGCACATCGTGCGGTCCCTGGGTCATGTGAACTTGGTCAGGTaGAGCCCCAGGCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RRGRGLDLHVHIVRSLGHVNLVR*SPRPWQ
Trigger: CTGCCAGGGCCTGGGGCTCAACCTGACCAAGTTCAC...ATGACCCAGGGACCGCACGATGTGCACGTGCAGATCGAGACCTCTCCCCCGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp ACCCTGGCTGTGCTGGTCCTCCGCCCAACGCTTGACGACGCCGGTGCCGTCCCAGCCAAGTTCCTGATATaGGGGTCAGAGCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TLAVLVLRPTLDDAGAVPAKFLI*GSEQLG
Trigger: TCCCAGCTGCTCTGACCCCAATATCAGGAACTTGGC...TGGGACGGCACCGGCGTCGTCAAGCGTTGGGCGGAGGACCAGCACAGCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CAACGCTTGACGACGCCGGTGCCGTCCCAGAGCTGGCGCACGACAGGCCCGTGCTCCGTCCACGTGTTCTaGTCGTACTGGGTGAACTTG +
Preference number: 5 (lower is better)
Translates to: QRLTTPVPSQSWRTTGPCSVHVF*SYWVNL
Trigger: CAAGTTCACCCAGTACGACAAGAACACGTGGACGGA...GCACGGGCCTGTCGTGCGCCAGCTCTGGGACGGCACCGGCGTCGTCAAGCGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CCCGTGCAATGCCGCCACGTCGTCGAGCGCCAAGCGCAACGCCTCTTCCCGGCTGGACAGAAGTCATCGTaGGGCATGTGCGGAATCAAG +
Preference number: 5 (lower is better)
Translates to: PVQCRHVVERQAQRLFPAGQKSS*GMCGIK
Trigger: CTTGATTCCGCACATGCCCAACGATGACTTCTGTCC...AGCCGGGAAGAGGCGTTGCGCTTGGCGCTCGACGACGTGGCGGCATTGCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CGGCCGGCCGGCTCAGGTTCCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTCCAGGATGGTGACCTaGTGTCCAGCATCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RPAGSGSPPREDIPRACASRMVT*CPASLS
Trigger: GCTCAGCGATGCTGGACACAAGGTCACCATCCTGGA...GGCACACGCTCTTGGAATATCTTCTCGGGGAGGGGAACCTGAGCCGGCCGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS CCA 90 bp ATGCATTTCTCGAAGGGGTCTTGGCTGCGTTCAGCCTTCCAGTCCTaGGAGGCCACCAGGCTGAGGAGGATGGGGACGAGGACGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MHFSKGSWLRSAFQS*EATRLRRMGTRTRR
Trigger: CCTCCTCGTCCTCGTCCCCATCCTCCTCAGCCTGGTGGCCTCCCAGGACTGGAAGGCTGAACGCAGCCAAGACCCCTTCGAGAAATGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341114.7
ENST00000391826.7
ENST00000593956.5
ENST00000595948.5
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5
CDS-3UTR CAA 90 bp ACGCCTCTTCCCGGCTCAAGCCGGCGAACGCTGCCGCCGCGTCCGACCACGTGTTTAAGGAAAGGCCATTaGTCAGGACTGGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TPLPGSSRRTLPPRPTTCLRKGH*SGLGRK
Trigger: CTTCCTTCCCAGTCCTGACAAATGGCCTTTCCTTAA...ACACGTGGTCGGACGCGGCGGCAGCGTTCGCCGGCTTGAGCCGGGAAGAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp GCCGGCAAAGTAGATGCGGCCATAAGGGACCGTCCAGTCATCCTTTTCGGTTTGGGCCCCTTCCGGCTGTaGATCTTGATGGCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: AGKVDAAIRDRPVILFGLGPFRL*ILMAAR
Trigger: GCGCGCCGCCATCAAGATCAACAGCCGGAAGGGGCC...CAAACCGAAAAGGATGACTGGACGGTCCCTTATGGCCGCATCTACTTTGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp GGCCACCAGCCCGGCCACACCAGCGCCAACCACAATCACCCTCTGGGGCTTCAGATGGTGGCTTTGTCCTaGTTAGTGGTGCCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: GHQPGHTSANHNHPLGLQMVALS*LVVPLL
Trigger: TAACAAGGGCACCACTAACAAGGACAAAGCCACCAT...CTGAAGCCCCAGAGGGTGATTGTGGTTGGCGCTGGTGTGGCCGGGCTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CCACCACATAGTTGCGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTGGCTTCAGGGTCCGATaGAGCCCCCAGGTCACCACC +
Preference number: 5 (lower is better)
Translates to: PPHSCAASLRAPPSTCSCGFRVR*SPQVTT
Trigger: GGTGGTGACCTGGGGGCTCAATCGGACCCTGAAGCC...ACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTATGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp ATAGTTGCGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTCGTACTGGGCTGCCTTCTTCCTTaGCCAGGTCATGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: IVAQLHFVHLRPRVLVVLGCLLP*PGHARG
Trigger: GCCCCTCGCATGACCTGGCAAAGGAAGAAGGCAGCC...CAGTACGACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CCACCACATAGTTGCGCAGCTTCACTTCGTGCACCTCCGTCCACGTGTTCTTGTTCGTACTGGGTGAACTaGGTCAGGTTGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PPHSCAASLRAPPSTCSCSYWVN*VRLSPR
Trigger: CCTGGGGCTCAACCTGACCAAGTTCACCCAGTACGA...ACAAGAACACGTGGACGGAGGTGCACGAAGTGAAGCTGCGCAACTATGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp CCCCTCCCCGAGAAGATATTCCAAGAGCGTGTGCCTTTCAAACTTCTTCATCGCGTCATCCTTTTCGGTTaGCCAGAGCGCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PLPEKIFQERVPFKLLHRVILFG*PERRRL
Trigger: CAGCCGCCGGCGCTCTGGCAAACCGAAAAGGATGAC...GCGATGAAGAAGTTTGAAAGGCACACGCTCTTGGAATATCTTCTCGGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS-3UTR CAA 90 bp GGGGACGCAAGGCGTAGCCCAGCTTCTCGGGCACCTTCTCCACCACATAGTTGCTTGTTAGTGGTGCCCTaGTTAGATCAGAGATGCCAA +
Preference number: 5 (lower is better)
Translates to: GDARRSPASRAPSPPHSCLLVVP*LDQRCQ
Trigger: TTGGCATCTCTGATCTAACAAGGGCACCACTAACAA...GCAACTATGTGGTGGAGAAGGTGCCCGAGAAGCTGGGCTACGCCTTGCGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS TCA 90 bp GTCCTTGTTAGTGGTGCCCTTGTTAGATCAGAGATGCCAAGTTCCTaGTATTGGGGTCAGAGCAGCTGGGAGGCTGTGAAAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VLVSGALVRSEMPSS*YWGQSSWEAVKGRS
Trigger: GGACCTGCCTTTCACAGCCTCCCAGCTGCTCTGACCCCAATATCAGGAACTTGGCATCTCTGATCTAACAAGGGCACCACTAACAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595948.5
CDS-3UTR CAA 90 bp TTCCGAAAATACTTTAATGCGAGGTCCTCGTGTGGGTCGTGTTTTGGAGAGATAACGGGCGATCGGTGTTaGAGTGGCCGCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: FRKYFNARSSCGSCFGEITGDRC*SGRLQC
Trigger: ACATTGAAGGCGGCCACTCAAACACCGATCGCCCGT...TATCTCTCCAAAACACGACCCACACGAGGACCTCGCATTAAAGTATTTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601717.5
CDS TCA 90 bp GTCCTTGTTAGTGGTGCCCTTGTTAGATCAGAGATGCCAAGTTCCTaGTATTGGGGTCAGAGCAGCTGGGAGGCTTTAAAAGCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: VLVSGALVRSEMPSS*YWGQSSWEALKASD
Trigger: ATCAGAGGCTTTTAAAGCCTCCCAGCTGCTCTGACCCCAATATCAGGAACTTGGCATCTCTGATCTAACAAGGGCACCACTAACAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341114.7
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS TCA 90 bp TTAGCCCAGGACAGAAGTCATCGTTGGGCATGTGCGGAATCAAGGTaGATGATGGTGGCTTTGTCCTTGTTAGTGGTGCCCTTGTTAGAT +
Preference number: 5 (lower is better)
Translates to: LAQDRSHRWACAESR*MMVALSLLVVPLLD
Trigger: ATCTAACAAGGGCACCACTAACAAGGACAAAGCCACCATCATTCACCTTGATTCCGCACATGCCCAACGATGACTTCTGTCCTGGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS GCA 90 bp ATGGCCTTTATGGTTAGCCCAGGACAGAAGTCATCGTTGGGCATGTaGGGAATCAAGGTGAATGATGGTGGCTTTGTCCTTGTTAGTGGT +
Preference number: 5 (lower is better)
Translates to: MAFMVSPGQKSSLGM*GIKVNDGGFVLVSG
Trigger: ACCACTAACAAGGACAAAGCCACCATCATTCACCTTGATTCCGCACATGCCCAACGATGACTTCTGTCCTGGGCTAACCATAAAGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS TCA 90 bp TTTTCTTCCGCTCAGTATCAGGATTCCTCCACCTTCTCTGGACCTTaGTTCAGTCTCCTAACTGCCACAGAAGGGATGAAGGTTGAACTC +
Preference number: 5 (lower is better)
Translates to: FSSAQYQDSSTFSGP*FSLLTATEGMKVEL
Trigger: GAGTTCAACCTTCATCCCTTCTGTGGCAGTTAGGAGACTGAATCAAGGTCCAGAGAAGGTGGAGGAATCCTGATACTGAGCGGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5
CDS CCA 72 bp AGCCCGGCCACACCAGCGCCAACCACAATCACCCTCTaGGGCTTCAGGGTCCGATTGAGCCCCCAGGTCACC +
Preference number: 6 (lower is better)
Translates to: SPATPAPTTITL*GFRVRLSPQVT
Trigger: GGTGACCTGGGGGCTCAATCGGACCCTGAAGCCCCAGAGGGTGATTGTGGTTGGCGCTGGTGTGGCCGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000391826.7
ENST00000595948.5
ENST00000596022.5
ENST00000601717.5
CDS CCA 72 bp GAGGAGGTGCAGGGCCAATGGGGCCATGACTCTCGGTaGGAGATGGTGTCTCCAGCTCTTGGTGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: EEVQGQWGHDSR*EMVSPALGDSR
Trigger: CCTGCTGTCACCAAGAGCTGGAGACACCATCTCCCACCGAGAGTCATGGCCCCATTGGCCCTGCACCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391826.7
ENST00000593956.5
CDS GCA 72 bp CAGGATCCTGCATGCATTTCTCGAAGGGGTCTTGGCTaGGTTCAGCCTTCCAGTCCTGGGAGGCCACCAGGC +
Preference number: 6 (lower is better)
Translates to: QDPACISRRGLG*VQPSSPGRPPG
Trigger: GCCTGGTGGCCTCCCAGGACTGGAAGGCTGAACGCAGCCAAGACCCCTTCGAGAAATGCATGCAGGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341114.7
ENST00000391826.7
ENST00000593956.5
ENST00000595948.5
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5
CDS CCA 72 bp CTCCAGCTGGGATGTCCTGATGTGGATGGGACAAGGTaGGTTTCACGCCTGCGCTCTCCGCTCCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: LQLGCPDVDGTR*VSRLRSPLPPS
Trigger: AGAAGGTGGGAGCGGAGAGCGCAGGCGTGAAACCCACCTTGTCCCATCCACATCAGGACATCCCAGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000597295.5
ENST00000601717.5
CDS CCA 72 bp GACTCTCGGTGGGAGATGGTGTTGCATGGCTGCCTCTaGGGGGCTCTCTCAGCACCCATGGCCTTTATGGTT +
Preference number: 6 (lower is better)
Translates to: DSRWEMVLHGCL*GALSAPMAFMV
Trigger: AACCATAAAGGCCATGGGTGCTGAGAGAGCCCCCCAGAGGCAGCCATGCAACACCATCTCCCACCGAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596011.1
ENST00000601717.5
CDS CAA 90 bp CAGCTGCTCATAGTCAGGATCCTGCATGCATTTCTCGAAGGGGTCTaGGCTGCGTTCAGCCTTCCAGTCCTGGGAGGCCACCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: QLLIVRILHAFLEGV*AAFSLPVLGGHQAE
Trigger: CTCAGCCTGGTGGCCTCCCAGGACTGGAAGGCTGAACGCAGCCAAGACCCCTTCGAGAAATGCATGCAGGATCCTGACTATGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341114.7
ENST00000391826.7
ENST00000593956.5
ENST00000595948.5
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5
CDS GCA 72 bp CCGGTAGGTGAAGATGCGGCCCCCGATCCTGTTATCTaGCTCCAGGATGGTGACCTTGAGCAGCTGCTCATA +
Preference number: 6 (lower is better)
Translates to: PVGEDAAPDPVI*LQDGDLEQLLI
Trigger: TATGAGCAGCTGCTCAAGGTCACCATCCTGGAGGCAGATAACAGGATCGGGGGCCGCATCTTCACCTACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593956.5
CDS CAA 72 bp ATAGTCAGGATCCTGCATGCATTTCTCGAAGGGGTCTaGGCTGCGTTCAGCCTTCCAGTCCTGGGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: IVRILHAFLEGV*AAFSLPVLGGH
Trigger: GTGGCCTCCCAGGACTGGAAGGCTGAACGCAGCCAAGACCCCTTCGAGAAATGCATGCAGGATCCTGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341114.7
ENST00000391826.7
ENST00000593956.5
ENST00000595948.5
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5
CDS CCA 72 bp GAGGAGGTGCAGGGCCAATGGGGCCATGACTCTCGGTaGGAGATGGTGTCTTTAAAAGCCTCTGATTCCAAA +
Preference number: 6 (lower is better)
Translates to: EEVQGQWGHDSR*EMVSLKASDSK
Trigger: TTTGGAATCAGAGGCTTTTAAAGACACCATCTCCCACCGAGAGTCATGGCCCCATTGGCCCTGCACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597295.5
CDS CAA 90 bp TCAGCACCCATGGCCTTTATGGTTAGCCCAGGACAGAAGTCATCGTaGGGCATGTGCGGAATCAAGGTGAATGATGGTGGCTTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: SAPMAFMVSPGQKSS*GMCGIKVNDGGFVL
Trigger: AAGGACAAAGCCACCATCATTCACCTTGATTCCGCACATGCCCAACGATGACTTCTGTCCTGGGCTAACCATAAAGGCCATGGGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS CAA 72 bp ATGGCCTTTATGGTTAGCCCAGGACAGAAGTCATCGTaGGGCATGTGCGGAATCAAGGTGAATGATGGTGGC +
Preference number: 6 (lower is better)
Translates to: MAFMVSPGQKSS*GMCGIKVNDGG
Trigger: GCCACCATCATTCACCTTGATTCCGCACATGCCCAACGATGACTTCTGTCCTGGGCTAACCATAAAGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS TCA 72 bp GCTCAGTATCAGGATTCCTCCACCTTCTCTGGACCTTaGTTCAGTCTCCTAACTGCCACAGAAGGGATGAAG +
Preference number: 6 (lower is better)
Translates to: AQYQDSSTFSGP*FSLLTATEGMK
Trigger: CTTCATCCCTTCTGTGGCAGTTAGGAGACTGAATCAAGGTCCAGAGAAGGTGGAGGAATCCTGATACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5
CDS GCA 72 bp TTGTCCTTGTTAGTGGTGCCCTTGTTAGATCAGAGATaGCAAGTTCCTGATATTGGGGTCAGAGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LSLLVVPLLDQR*QVPDIGVRAAG
Trigger: CCCAGCTGCTCTGACCCCAATATCAGGAACTTGGCATCTCTGATCTAACAAGGGCACCACTAACAAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS GCA 72 bp ATGGTTAGCCCAGGACAGAAGTCATCGTTGGGCATGTaGGGAATCAAGGTGAATGATGGTGGCTTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: MVSPGQKSSLGM*GIKVNDGGFVL
Trigger: AAGGACAAAGCCACCATCATTCACCTTGATTCCGCACATGCCCAACGATGACTTCTGTCCTGGGCTAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000601717.5
CDS CAA 90 bp GTGTTGTCTTCATATGAATTAATGAGGAACTTAAGGAAAGGCCATTaGTCAGGACTGGGAAGGAAGCACATCTGTGTATTTTCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: VLSSYELMRNLRKGH*SGLGRKHICVFSSA
Trigger: AGCGGAAGAAAATACACAGATGTGCTTCCTTCCCAGTCCTGACAAATGGCCTTTCCTTAAGTTCCTCATTAATTCATATGAAGACAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341114.7
ENST00000595948.5
ENST00000596011.1
ENST00000596022.5
ENST00000597295.5
ENST00000601717.5