Pregenerated sensors for IL4 (Homo sapiens)
Ensembl gene IDs: ENSG00000113520Ensembl transcript IDs: ENST00000231449.7, ENST00000350025.2, ENST00000495905.1, ENST00000622422.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ATATTCAGCTCGAACACTTTGAATATTTCTCTCTCATaGTCGTCTTTAGCCTTTCCAAGAAGTTTTCCAACG | + |
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Preference number: 3 (lower is better) Translates to: IFSSNTLNISLS*SSLAFPRSFPT Trigger: CGTTGGAAAACTTCTTGGAAAGGCTAAAGACGATCATGAGAGAGAAATATTCAAAGTGTTCGAGCTGAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | CTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGCCTGTGGAACTGCTGTaGAGTCGCACCCAGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LHRTGIQARQAPEVPVEPPVELL*SRTQAA Trigger: CGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGG...CGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | CTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGGGAGGTGGGCAGACATaGATGCTGCTTGGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LHRTGIQARQAPEVPVEPGGGQT*MLLGGS Trigger: GCTGCCTCCAAGCAGCATGCATGTCTGCCCACCTCC...CGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | TCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGGGGGGCGGCAGATGGTaGCTGTGTGTCTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SNVLWLASFTGQEFKPARGGGRW*LCVWRW Trigger: CCACCTCCAGACACACAGGCACCATCTGCCGCCCCC...CCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | AACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCGTAGGCGAGTCGAGGTaGAAGGGACACGGGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: NVLWLASFTGQEFKPARPVGESR*KGHGLM Trigger: CATCAGCCCGTGTCCCTTCCACCTCGACTCGCCTAC...GGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | TTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGGTCCGTGGACAAAGTTaGCGGCACATGCTAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FLHRTGIQARQAPEVPVEVRGQS*RHMLAG Trigger: TCCTGCTAGCATGTGCCGGCAACTTTGTCCACGGAC...CTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | GAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAATCGGAGGAATCGGATCAGCTaGTTGTGCCTGTGGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: EFKPARPQRFLSSRFRNRRNRIS*LCLWNC Trigger: GCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCT...CCGATTCCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | TTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTGGCAGACATGCATGCTaGTTGGAGGCAGCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: FTGQEFKPARPQRFLSSRGRHAC*LEAAKM Trigger: CATCTTTGCTGCCTCCAAGCAGCATGCATGTCTGCC...ACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | AGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAATCGTGGGCAGACATGCATaGTGCTTGGAGGCAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RNSSPPGPRGSCRAVSGIVGRHA*CLEAAK Trigger: CTTTGCTGCCTCCAAGCAGCATGCATGTCTGCCCAC...GATTCCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | GGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGGTGCACAGAGTCTTCTaGTCTGTGAGGCTGTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: GQEFKPARPQRFLSSRFRVHRVF*SVRLFK Trigger: TTTGAACAGCCTCACAGAGCAGAAGACTCTGTGCAC...CCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | TCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGTTGTGCCTGTGGAACTaGTGTGCAGTCGCACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SNVLWLASFTGQEFKPARLCLWN*CAVAPR Trigger: CCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAA...CCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | AGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGAGAGGGGGAAGCAGTTaGGAGGTGAGACCCATTAAT | + |
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Preference number: 4 (lower is better) Translates to: RTGIQARQAPEVPVEPFQRGGSS*EVRPIN Trigger: ATTAATGGGTCTCACCTCCCAACTGCTTCCCCCTCT...CTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | TTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCAACGTACTCTGGTTaGCTTCCTTCACAGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: FLHRTGIQARQAPEVPVEPTYSG*LPSQDR Trigger: CCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGG...CTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR GCA 90 bp | AGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAATCTTACGGTCAACTCGGTaGACAGAGTCTTCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RNSSPPGPRGSCRAVSGILRSTR*TESSAL Trigger: CAGAGCAGAAGACTCTGTGCACCGAGTTGACCGTAA...GATTCCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | TCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGAGCTGCTTGTGCCTGTaGAACTGCTGTGCAGTCGCA | + |
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Preference number: 4 (lower is better) Translates to: SNVLWLASFTGQEFKPARSCLCL*NCCAVA Trigger: TGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCT...CCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR TCA 90 bp | AGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGGTGTCGATTTGCAGTaGCAATGTGAGGCAATTAGT | + |
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Preference number: 4 (lower is better) Translates to: RTGIQARQAPEVPVEPFQGVDLQ*QCEAIS Trigger: ACTAATTGCCTCACATTGTCACTGCAAATCGACACC...CTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | TTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTTTCCAACGTACTCTaGTTGGCTTCCTTCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: FTGQEFKPARPQRFLSSRFSNVL*LASFTG Trigger: TCCTGTGAAGGAAGCCAACCAGAGTACGTTGGAAAA...ACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | TCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGGACATGCATGCTGCTTaGAGGCAGCAAAGATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SNVLWLASFTGQEFKPARDMHAA*RQQRCL Trigger: CAGACATCTTTGCTGCCTCCAAGCAGCATGCATGTC...CCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR TCA 90 bp | GGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAATATTTCTCTCTCATaGTCGTCTTTAGCCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GQEFKPARPQRFLSSRFRNISLS*SSLAFP Trigger: TGGAAAGGCTAAAGACGATCATGAGAGAGAAATATT...CCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR TCA 90 bp | GGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGTCAGCTCGAACACTTTaGATATTTCTCTCTCATGAT | + |
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Preference number: 4 (lower is better) Translates to: GQEFKPARPQRFLSSRFRSARTL*IFLSHD Trigger: ATCATGAGAGAGAAATATTCAAAGTGTTCGAGCTGA...CCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR TCA 90 bp | AAGTTTTCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGAAGCAGTTGGGAGGTaGGACCCATTAATAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KFSNVLWLASFTGQEFKPEAVGR*DPLIGV Trigger: GACACCTATTAATGGGTCTCACCTCCCAACTGCTTC...GGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGAAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CCA 90 bp | CCAAGAAGTTTTCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCATCGCACTTGTGTCCGTaGACAAAGTTGCCGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: PRSFPTYSGWLPSQDRNSSHLCP*TKLPAH Trigger: ATGTGCCGGCAACTTTGTCCACGGACACAAGTGCGA...TGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGAAAACTTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS GCA 90 bp | AGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAATCGGATCAGCTaGTTGTGCCTGTGGAACTGCTGTGCAGTCGCACCCAGGCAGCGA | + |
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Preference number: 5 (lower is better) Translates to: RPQRFLSSRFRNRIS*LCLWNCCAVAPRQR Trigger: TCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCTCGACAGGAACCTCTGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS GCA 90 bp | TCGAGCCGTTTCAGGAATCGGATCAGCTGCTTGTGCCTGTGGAACTaGTGTGCAGTCGCACCCAGGCAGCGAGTGTCCTTCTCATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSRFRNRISCLCLWN*CAVAPRQRVSFSWW Trigger: CCACCATGAGAAGGACACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCTCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000495905.1 ENST00000622422.1 |
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| CDS GCA 90 bp | CCGTTTCAGGAATCGGATCAGCTGCTTGTGCCTGTGGAACTGCTGTaGAGTCGCACCCAGGCAGCGAGTGTCCTTCTCATGGTGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: PFQESDQLLVPVELL*SRTQAASVLLMVAV Trigger: TACAGCCACCATGAGAAGGACACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000495905.1 ENST00000622422.1 |
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| CDS CCA 90 bp | TTCCTGTCGAGCCGTTTCAGGAATCGGATCAGCTGCTTGTGCCTGTaGAACTGCTGTGCAGTCGCACCCAGGCAGCGAGTGTCCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FLSSRFRNRISCLCL*NCCAVAPRQRVSFS Trigger: TGAGAAGGACACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCTCGACAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000495905.1 ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | TTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTCCAACGTACTCTGGTaGGCTTCCTTCACAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: FTGQEFKPARPQRFLSSRSNVLW*ASFTGQ Trigger: CTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGA...ACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | TCCAACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGTGTCCGTGGACAAAGTaGCCGGCACATGCTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SNVLWLASFTGQEFKPARCPWTK*PAHASR Trigger: CCTGCTAGCATGTGCCGGCAACTTTGTCCACGGACA...CCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | GGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAAGGTGATATCGCACTaGTGTCCGTGGACAAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GQEFKPARPQRFLSSRFRKVISH*CPWTKL Trigger: CAACTTTGTCCACGGACACAAGTGCGATATCACCTT...CCTGAAACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | TTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGTAGACATGCATGCTGCTaGGAGGCAGCAAAGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: FTGQEFKPARPQRFLSSRRHACC*EAAKMS Trigger: AGACATCTTTGCTGCCTCCAAGCAGCATGCATGTCT...ACGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | CTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGCCGAGGTTTCCTTCTCAGTaGTGTTCTCTCTGGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LHRTGIQARQAPEVPVEPRFPSQ*CSLWAL Trigger: CAAAGCCCAGAGAGAACACAACTGAGAAGGAAACCT...CGGCTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | AACGTACTCTGGTTGGCTTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCAATCGGATCAGCTGCTaGTGCCTGTGGAACTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: NVLWLASFTGQEFKPARPNRISC*CLWNCC Trigger: ACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATT...GGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAAGCCAACCAGAGTACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS-3UTR CAA 90 bp | TTCCTTCACAGGACAGGAATTCAAGCCCGCCAGGCCCCAGAGGTTCCTGTCGAGAGGCTGTTCAAAGTTTaGATGATCTCCTGTAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: FLHRTGIQARQAPEVPVERLFKV*MISCKV Trigger: CACCTTACAGGAGATCATCAAAACTTTGAACAGCCT...CTCGACAGGAACCTCTGGGGCCTGGCGGGCTTGAATTCCTGTCCTGTGAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS CCA 90 bp | AAAGTTTTGATGATCTCCTGTAAGGTGATATCGCACTTGTGTCCGTaGACAAAGTTGCCGGCACATGCTAGCAGGAAGAACAGAGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: KVLMISCKVISHLCP*TKLPAHASRKNRGG Trigger: TCCCCCTCTGTTCTTCCTGCTAGCATGTGCCGGCAACTTTGTCCACGGACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS CAA 90 bp | CCCCAGAGGTTCCTGTCGAGCCGTTTCAGGAATCGGATCAGCTGCTaGTGCCTGTGGAACTGCTGTGCAGTCGCACCCAGGCAGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PQRFLSSRFRNRISC*CLWNCCAVAPRQRV Trigger: CACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCTCGACAGGAACCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS CCA 72 bp | AGCCGTTTCAGGAATCGGATCAGCTGCTTGTGCCTGTaGAACTGCTGTGCAGTCGCACCCAGGCAGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SRFRNRISCLCL*NCCAVAPRQRV Trigger: CACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000495905.1 ENST00000622422.1 |
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| CDS GCA 72 bp | GAATCGGATCAGCTGCTTGTGCCTGTGGAACTGCTGTaGAGTCGCACCCAGGCAGCGAGTGTCCTTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: ESDQLLVPVELL*SRTQAASVLLM Trigger: CATGAGAAGGACACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000495905.1 ENST00000622422.1 |
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| CDS GCA 72 bp | AGGTTCCTGTCGAGCCGTTTCAGGAATCGGATCAGCTaGTTGTGCCTGTGGAACTGCTGTGCAGTCGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RFLSSRFRNRIS*LCLWNCCAVAP Trigger: GGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCTCGACAGGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS CAA 72 bp | TTCCTGTCGAGCCGTTTCAGGAATCGGATCAGCTGCTaGTGCCTGTGGAACTGCTGTGCAGTCGCACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FLSSRFRNRISC*CLWNCCAVAPR Trigger: CCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCTCGACAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000495905.1 ENST00000622422.1 |
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| CDS GCA 72 bp | GGTGGCTGTAGAACTGCCGGAGCACAGTCGCAGCCCTaGAGAAGGTTTCCTTCTCAGTTGTGTTCTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GGCRTAGAQSQP*RRFPSQLCSLW Trigger: CCAGAGAGAACACAACTGAGAAGGAAACCTTCTGCAGGGCTGCGACTGTGCTCCGGCAGTTCTACAGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622422.1 |
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| CDS GCA 72 bp | GGTGGCTGTAGAACTGCCGGAGCACAGTCGCAGCCCTaGAGAAGGTTTCCTTCTCAGTTGTGTTCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGCRTAGAQSQP*RRFPSQLCSSA Trigger: AGCAGAAGAACACAACTGAGAAGGAAACCTTCTGCAGGGCTGCGACTGTGCTCCGGCAGTTCTACAGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000350025.2 |
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| CDS CAA 72 bp | GAGACAGAGTTAACCTCCAACCGGACAGAGAAGTCCTaGATGAGCAGCTCTCACTCCCTCCAACTGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: ETELTSNRTEKS*MSSSHSLQLRK Trigger: TTTCCTCAGTTGGAGGGAGTGAGAGCTGCTCATCAAGGACTTCTCTGTCCGGTTGGAGGTTAACTCTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495905.1 |
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| CDS CCA 72 bp | ATGATCTCCTGTAAGGTGATATCGCACTTGTGTCCGTaGACAAAGTTGCCGGCACATGCTAGCAGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: MISCKVISHLCP*TKLPAHASRKN Trigger: GTTCTTCCTGCTAGCATGTGCCGGCAACTTTGTCCACGGACACAAGTGCGATATCACCTTACAGGAGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS CAA 90 bp | AGGCTGTTCAAAGTTTTGATGATCTCCTGTAAGGTGATATCGCACTaGTGTCCGTGGACAAAGTTGCCGGCACATGCTAGCAGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RLFKVLMISCKVISH*CPWTKLPAHASRKN Trigger: GTTCTTCCTGCTAGCATGTGCCGGCAACTTTGTCCACGGACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTTGAACAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS CAA 90 bp | AACTCGGTGCACAGAGTCTTCTGCTCTGTGAGGCTGTTCAAAGTTTaGATGATCTCCTGTAAGGTGATATCGCACTTGTGTCCGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: NSVHRVFCSVRLFKV*MISCKVISHLCPWT Trigger: TGTCCACGGACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTTGAACAGCCTCACAGAGCAGAAGACTCTGTGCACCGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231449.7 ENST00000622422.1 |
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| CDS CAA 72 bp | AAAGTTTTGATGATCTCCTGTAAGGTGATATCGCACTaGTGTCCGTGGACAAAGTTGCCGGCACATGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: KVLMISCKVISH*CPWTKLPAHAS Trigger: GCTAGCATGTGCCGGCAACTTTGTCCACGGACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000231449.7 ENST00000350025.2 ENST00000622422.1 |
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| CDS CAA 90 bp | TCCTTCTCAGTTGTGTTCTTCTGCTCTGTGAGGCTGTTCAAAGTTTaGATGATCTCCTGTAAGGTGATATCGCACTTGTGTCCGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: SFSVVFFCSVRLFKV*MISCKVISHLCPWT Trigger: TGTCCACGGACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTTGAACAGCCTCACAGAGCAGAAGAACACAACTGAGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000350025.2 |
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| CDS CAA 72 bp | CACAGAGTCTTCTGCTCTGTGAGGCTGTTCAAAGTTTaGATGATCTCCTGTAAGGTGATATCGCACTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HRVFCSVRLFKV*MISCKVISHLC Trigger: ACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTTGAACAGCCTCACAGAGCAGAAGACTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231449.7 ENST00000622422.1 |
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| CDS CAA 72 bp | GTTGTGTTCTTCTGCTCTGTGAGGCTGTTCAAAGTTTaGATGATCTCCTGTAAGGTGATATCGCACTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: VVFFCSVRLFKV*MISCKVISHLC Trigger: ACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTTGAACAGCCTCACAGAGCAGAAGAACACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000350025.2 |
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