Pregenerated sensors for IL37 (Homo sapiens)
Ensembl gene IDs: ENSG00000125571Ensembl transcript IDs: ENST00000263326.8, ENST00000311328.2, ENST00000349806.7, ENST00000352179.7, ENST00000353225.7
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCGGGGAGGCTTGGGCCTaGTTCCAGGGGGCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFGEAWA*FQGASS Trigger: GCTGGAAGCCCCCTGGAACCAGGCCCAAGCCTCCCC...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTATGAACCATCCGGGGTaGGCCGCCGACTCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSMNHPG*AADSSM Trigger: CATGCTGGAGTCGGCGGCTCACCCCGGATGGTTCAT...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTGCAGGAGGTGCAGATaGACCATCCGGGGTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSCRRCR*TIRGEP Trigger: CGGCTCACCCCGGATGGTTCATCTGCACCTCCTGCA...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCATGAACCATCCGGGGTaGGCCGCCGACTCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFMNHPG*AADSSM Trigger: CATGCTGGAGTCGGCGGCTCACCCCGGATGGTTCAT...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCTGCAGGAGGTGCAGATaGACCATCCGGGGTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFCRRCR*TIRGEP Trigger: CGGCTCACCCCGGATGGTTCATCTGCACCTCCTGCA...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTGCCCATTTTCACTCCTaGGTTCTCCCCCACAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSAHFHS*VLPHKG Trigger: TCCTTTGTGGGGGAGAACTCAGGAGTGAAAATGGGC...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCGCCCATTTTCACTCCTaGGTTCTCCCCCACAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFAHFHS*VLPHKG Trigger: TCCTTTGTGGGGGAGAACTCAGGAGTGAAAATGGGC...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTCAGTTTCCTAATCGCTaGCCTCACTGGGGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSQFPNR*PHWGSF Trigger: AAATGAGCCCCAGTGAGGTCAGCGATTAGGAAACTG...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTCGTGCTGATTCCTTTTaGGCAGCCAGCTTCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSRADSF*AASFIS Trigger: ACTGATGAAGCTGGCTGCCCAAAAGGAATCAGCACG...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTGAGGAAGGCGTTCAATaGGGCAGTTTCCTAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSEEGVQ*GSFLIA Trigger: AGCGATTAGGAAACTGCCCCATTGAACGCCTTCCTC...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTATCTGGAACTGCTATaGGATTCCCAGAGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSYLELL*DSQSPG Trigger: TCCTGGACTCTGGGAATCTCATAGCAGTTCCAGATA...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311328.2 ENST00000352179.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCTGTGAACAAAATTCATaGTGGGGAGGCTTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFCEQNS*WGGLGL Trigger: CAGGCCCAAGCCTCCCCACCATGAATTTTGTTCACA...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000353225.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCCGTGCTGATTCCTTTTaGGCAGCCAGCTTCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFRADSF*AASFIS Trigger: ACTGATGAAGCTGGCTGCCCAAAAGGAATCAGCACG...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCGAGGAAGGCGTTCAATaGGGCAGTTTCCTAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFEEGVQ*GSFLIA Trigger: AGCGATTAGGAAACTGCCCCATTGAACGCCTTCCTC...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCCCTTCTAAGCAGCACTaGGGTTCATCTTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFPSKQH*GSSFSQ Trigger: CTGGGAAAAAGATGAACCCCAGTGCTGCTTAGAAGG...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000352179.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTCCTGGTCATGAATGCTaGATTTCTTCGGGTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSPGHEC*ISSGLS Trigger: ACTTAAACCCGAAGAAATTCAGCATTCATGACCAGG...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311328.2 ENST00000352179.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCTCTTCTAAGCAGCACTaGGGTTCATCTTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFSSKQH*GSSFSQ Trigger: CTGGGAAAAAGATGAACCCCAGTGCTGCTTAGAAGA...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000349806.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCCCTGGTCATGAATGCTaGATTTCTTCGGGTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFPGHEC*ISSGLS Trigger: ACTTAAACCCGAAGAAATTCAGCATTCATGACCAGG...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311328.2 ENST00000352179.7 |
||
| CDS-3UTR GCA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTGTTTTTATCTGGAACTaGTATGAGATTCCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVFIQLVQISEEGVQWGSVFIWN*YEIPRV Trigger: GACTCTGGGAATCTCATAGCAGTTCCAGATAAAAAC...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000311328.2 ENST00000352179.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCCTTCAGCTGAAGGGATaGATGACTTTGTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFLQLKG*MTLSFI Trigger: GATAAAGGACAAAGTCATCCATCCCTTCAGCTGAAG...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCAAGAAGATCTTTGTGTaGACAAAATTCATGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFKKIFV*TKFMVG Trigger: CCCCACCATGAATTTTGTTCACACAAAGATCTTCTT...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000353225.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCTGCAAAGAAGATCTCTaGGCGTATGTAGTTTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VFIQLVQISEEGVQWGSFCKEDL*AYVVFI Trigger: GATAAAAACTACATACGCCCAGAGATCTTCTTTGCA...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000311328.2 ENST00000352179.7 |
||
| CDS TCA 90 bp | TATCTGTCACCCCAACAGGCTCATTACAATTGCAGGAGGTGCAGATaGACCATCCGGGGTGAGCCGCCGACTCCAGCATGTTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSPQQAHYNCRRCR*TIRGEPPTPACSRS Trigger: GCTCCTGGAACATGCTGGAGTCGGCGGCTCACCCCGGATGGTTCATCTGCACCTCCTGCAATTGTAATGAGCCTGTTGGGGTGACAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CAA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTCATGGTGGGGAGGCTaGGGCCTGGTTCCAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVFIQLVQISEEGVQWGSSWWGG*GLVPGG Trigger: GCCCCCTGGAACCAGGCCCAAGCCTCCCCACCATGA...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000353225.7 |
||
| CDS TCA 90 bp | TCCCAGAGTCCAGGACCAGTACTTTGTGATCCTGGTCATGAATGCTaGATTTCTTCGGGTTTAAGTTCTTCACCTTTGGACCTCTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPGPVLCDPGHEC*ISSGLSSSPLDLLS Trigger: GCTTAAGAGGTCCAAAGGTGAAGAACTTAAACCCGAAGAAATTCAGCATTCATGACCAGGATCACAAAGTACTGGTCCTGGACTCTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311328.2 |
||
| CDS TCA 90 bp | TCCCAGAGTCCAGGACCAGTACTTTGTGATCCTGGTCATGAATGCTaGATTTCTTCGGGTTTAAGTTCTTCACCTTTGGACCTTCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPGPVLCDPGHEC*ISSGLSSSPLDLLS Trigger: GCTTAGAAGGTCCAAAGGTGAAGAACTTAAACCCGAAGAAATTCAGCATTCATGACCAGGATCACAAAGTACTGGTCCTGGACTCTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352179.7 |
||
| CDS TCA 90 bp | TCCCAGAGTCCAGGACCAGTACTTTGTGATCCTGGTCATGAATGCTaGATTTCTTCGGGTTTAAGTTCTTCACCTTTGGACTTGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQSPGPVLCDPGHEC*ISSGLSSSPLDLCE Trigger: TTCACACAAGTCCAAAGGTGAAGAACTTAAACCCGAAGAAATTCAGCATTCATGACCAGGATCACAAAGTACTGGTCCTGGACTCTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263326.8 |
||
| CDS TCA 90 bp | CAAAGAAGATCTCTGGGCGTATGTAGTTTTTATCTGGAACTGCTATaGGATTCCCAGAGTCCAGGACCAGTACTTTGTGATCCTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QRRSLGVCSFYLELL*DSQSPGPVLCDPGH Trigger: ATGACCAGGATCACAAAGTACTGGTCCTGGACTCTGGGAATCTCATAGCAGTTCCAGATAAAAACTACATACGCCCAGAGATCTTCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000352179.7 |
||
| CDS-3UTR CAA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTACAGGCTCATTACAATaGCAGGAGGTGCAGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVFIQLVQISEEGVQWGSTGSLQ*QEVQMN Trigger: GTTCATCTGCACCTCCTGCAATTGTAATGAGCCTGT...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CAA 90 bp | GGTGTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTAAGGGATGGATGACTTaGTCCTTTATCCTTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVFIQLVQISEEGVQWGSKGWMT*SFILVT Trigger: TGTGACAAGGATAAAGGACAAAGTCATCCATCCCTT...ACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCAAGGGATGGATGACTTaGTCCTTTATCCTTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VFIQLVQISEEGVQWGSFKGWMT*SFILVT Trigger: TGTGACAAGGATAAAGGACAAAGTCATCCATCCCTT...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCTTAAGTTCTTCACCTTaGGACCTCTTAAGCGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFIQLVQISEEGVQWGSFLSSSP*DLLSAS Trigger: AGAAGCGCTTAAGAGGTCCAAAGGTGAAGAACTTAA...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311328.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTTATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATGGGGCAGTTTCTTAAGTTCTTCACCTTaGGACCTTCTAAGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VFIQLVQISEEGVQWGSFLSSSP*DLLSST Trigger: AGTGCTGCTTAGAAGGTCCAAAGGTGAAGAACTTAA...GAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000352179.7 |
||
| CDS TCA 72 bp | TTACAATTGCAGGAGGTGCAGATGAACCATCCGGGGTaGGCCGCCGACTCCAGCATGTTCCAGGAGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LQLQEVQMNHPG*AADSSMFQEPT Trigger: GGTGGGCTCCTGGAACATGCTGGAGTCGGCGGCTCACCCCGGATGGTTCATCTGCACCTCCTGCAATTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS CCA 72 bp | AAGTCCAAGACCTGGGCCAGGGATCCTCGTGGTCTGTaGCTCTGTCTTGGACTCCTGGAGCTCTGTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KSKTWARDPRGL*LCLGLLELCLP Trigger: AGGCAAACAGAGCTCCAGGAGTCCAAGACAGAGCCACAGACCACGAGGATCCCTGGCCCAGGTCTTGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263326.8 |
||
| CDS CCA 72 bp | TGGAATGAAGTCCAAGACCTGGGCCAGGGATCCTCGTaGTCTGTGGCTCTGTCTTGGACTCCTGGAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WNEVQDLGQGSS*SVALSWTPGAL Trigger: CAGAGCTCCAGGAGTCCAAGACAGAGCCACAGACCACGAGGATCCCTGGCCCAGGTCTTGGACTTCATTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263326.8 |
||
| CDS CCA 72 bp | TCCAGGGGGCTTCCAGCCGGGTCTTCTAAGCAGCACTaGGGTTCATCTTTTTCCCAGTCCTCAGAGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SRGLPAGSSKQH*GSSFSQSSEPI Trigger: AATGGGCTCTGAGGACTGGGAAAAAGATGAACCCCAGTGCTGCTTAGAAGACCCGGCTGGAAGCCCCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000263326.8 ENST00000353225.7 |
||
| CDS CCA 72 bp | GGGATCCTCGTGGTCTGTGGCTCTGTCTTGGACTCCTaGAGCTCTGTTTGCCTTCAGTTCTCAGGATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GILVVCGSVLDS*SSVCLQFSGSF Trigger: AAAGGATCCTGAGAACTGAAGGCAAACAGAGCTCCAGGAGTCCAAGACAGAGCCACAGACCACGAGGATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263326.8 |
||
| CDS CCA 72 bp | ATACAATTAGTTCAAATTAGCGAGGAAGGCGTTCAATaGGGCAGTTTCCTAATCGCTGACCTCACTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IQLVQISEEGVQ*GSFLIADLTGA Trigger: AGCCCCAGTGAGGTCAGCGATTAGGAAACTGCCCCATTGAACGCCTTCCTCGCTAATTTGAACTAATTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS CCA 72 bp | TTTAAGTTCTTCACCTTTGGACCTTCTAAGCAGCACTaGGGTTCATCTTTTTCCCAGTCCTCAGAGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: FKFFTFGPSKQH*GSSFSQSSEPI Trigger: AATGGGCTCTGAGGACTGGGAAAAAGATGAACCCCAGTGCTGCTTAGAAGGTCCAAAGGTGAAGAACTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000352179.7 |
||
| CDS TCA 72 bp | CCAGGACCAGTACTTTGTGATCCTGGTCATGAATGCTaGATTTCTTCGGGTTTAAGTTCTTCACCTTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGPVLCDPGHEC*ISSGLSSSPLD Trigger: GTCCAAAGGTGAAGAACTTAAACCCGAAGAAATTCAGCATTCATGACCAGGATCACAAAGTACTGGTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000352179.7 |
||
| CDS CCA 72 bp | CAGCTTCATCAGTTTCTCCTTCTTCAGCTGAAGGGATaGATGACTTTGTCCTTTATCCTTGTCACAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLHQFLLLQLKG*MTLSFILVTVE Trigger: CTCTACTGTGACAAGGATAAAGGACAAAGTCATCCATCCCTTCAGCTGAAGAAGGAGAAACTGATGAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||
| CDS CAA 90 bp | CAGCTTCATCAGTTTCTCCTTCTTCAGCTGAAGGGATGGATGACTTaGTCCTTTATCCTTGTCACAGTAGAGACAAAACTCCCCTTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: QLHQFLLLQLKGWMT*SFILVTVETKLPFR Trigger: TCTAAAGGGGAGTTTTGTCTCTACTGTGACAAGGATAAAGGACAAAGTCATCCATCCCTTCAGCTGAAGAAGGAGAAACTGATGAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000263326.8 ENST00000311328.2 ENST00000349806.7 ENST00000352179.7 ENST00000353225.7 |
||