Pregenerated sensors for IL36B (Homo sapiens)
Ensembl gene IDs: ENSG00000136696Ensembl transcript IDs: ENST00000259213.9, ENST00000327407.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTaGCTTTTGGATAGTAAGAATGAGGTAAGCTATGGATGGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SSEGLGTEMDVWRRR*LLDSKNEVSYGWAE Trigger: TTCAGCCCATCCATAGCTTACCTCATTCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTATGACTCTGACAGCTTaGTTCTCTATCCTGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: HSSEGLGTEMDVWRRRWLMTLTA*FSILEP Trigger: TGGTTCCAGGATAGAGAATCAAGCTGTCAGAGTCAT...AAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAACTGGGCATGGCAGCTaGGTGGATGGTGGGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: CHESTSLHHGLAKGIGMETGHGS*VDGGVR Trigger: TCTTACCCCACCATCCACTCAGCTGCCATGCCCAGT...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR CAA 90 bp | GAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTaGGATAGTAAGAATGAGGTAAGCTATGGATGGGCTGAACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: EGLGTEMDVWRRRWL*DSKNEVSYGWAELL Trigger: TAGCAGTTCAGCCCATCCATAGCTTACCTCATTCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGATAGTAAGAATGAGGTAAGCTATGGATGGGCTGAACTGCTAGTGAACTCACTTGATTCTCTATCCTaGAACCAGCCACCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LDSKNEVSYGWAELLVNSLDSLS*NQPPTA Trigger: GGCTGTGGGTGGCTGGTTCCAGGATAGAGAATCAAG...TGAGTTCACTAGCAGTTCAGCCCATCCATAGCTTACCTCATTCTTACTATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR CAA 90 bp | CCCCTGTACATCAGGAAAAGAAATAACAGATTGAGCTCTAGTAGCTaGCTGCTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PLYIRKRNNRLSSSS*LLCGNSGAMLSDLP Trigger: GGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACTAGAGCTCAATCTGTTATTTCTTTTCCTGATGTACAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| 3UTR-3UTR TCA 90 bp | AAATGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGAAGCTATGGATGGGCTaGACTGCTAGTGAACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KCHESTSLHHGLAKGIGMKLWMG*TASELS Trigger: ACTGAGTTCACTAGCAGTTCAGCCCATCCATAGCTT...CATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAGGTAAGCTATGGATaGGCTGAACTGCTAGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: KCHESTSLHHGLAKGIGMEVSYG*AELLVN Trigger: GTTCACTAGCAGTTCAGCCCATCCATAGCTTACCTC...CATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR CAA 90 bp | TTGAGCTCTAGTAGCTTGCTGCTCTGTGGGAATTCAGGAGCAATGTaGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTTTACAATT | + |
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Preference number: 2 (lower is better) Translates to: LSSSSLLLCGNSGAM*SDLPIFHENLDFTI Trigger: AATTGTAAAGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACTAGAGCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| 3UTR CCA 72 bp | GATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATaGATGTTTGGAGGAGGAGGTGGCTTTTGGATAGTA | + |
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Preference number: 3 (lower is better) Translates to: DSDIRVRVLVQK*MFGGGGGFWIV Trigger: TACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR CAA 90 bp | TCATCTTGGGATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGATGACTCTGACAGCTaGATTCTCTATCCTGGAACC | + |
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Preference number: 3 (lower is better) Translates to: SSWDSDIRVRVLVQKWMFDDSDS*ILYPGT Trigger: GGTTCCAGGATAGAGAATCAAGCTGTCAGAGTCATC...AAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR CCA 72 bp | GGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTaGCTTTTGGATAGTAAGAATGAGGTAAGCTATGGA | + |
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Preference number: 3 (lower is better) Translates to: GLGTEMDVWRRR*LLDSKNEVSYG Trigger: TCCATAGCTTACCTCATTCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAAGGAGGAGGTGGCTTTaGGATAGTAAGAATGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: CHESTSLHHGLAKGIGMERRRWL*DSKNEV Trigger: TACCTCATTCTTACTATCCAAAAGCCACCTCCTCCT...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR TCA 72 bp | ATTTTTAGGTTTCATCTTGGGATAGTGACATTCGAGTaGGGGTCTTGGTACAGAAATGGATGTTTGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: IFRFHLGIVTFE*GSWYRNGCLEE Trigger: CTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGAAACCTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAATTCGAGTGAGGGTCTaGGTACAGAAATGGATGTTT | + |
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Preference number: 3 (lower is better) Translates to: CHESTSLHHGLAKGIGMEIRVRV*VQKWMF Trigger: AAACATCCATTTCTGTACCAAGACCCTCACTCGAAT...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGACTGGGCATGGCAGCTaGGTGGATGGTGGGGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWTGHGS*VDGGVR Trigger: TCTTACCCCACCATCCACTCAGCTGCCATGCCCAGT...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | CATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTCCCGTTGTGGGTTCATaGTGTCTTCAGAGCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HSSEGLGTEMDVWRRRWLPVVGS*CLQSLL Trigger: CAAAAGGCTCTGAAGACATCATGAACCCACAACGGG...AAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | GTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGATAGTAAGATGGTGGAGGTGGCTATaGACCAGCCAGGGTAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VLVQKWMFGGGGGFWIVRWWRWL*TSQGKR Trigger: TCTCTTACCCTGGCTGGTTCATAGCCACCTCCACCA...TCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGATAGTGACATTCGAGTaGGGGTCTTGGTACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWIVTFE*GSWYRN Trigger: ATTTCTGTACCAAGACCCTCACTCGAATGTCACTAT...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR GCA 90 bp | CATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTCTTGCCCTGAATTTCTaGACAGAAGAGACAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: HSSEGLGTEMDVWRRRWLLALNF*TEETEI Trigger: GATCTCTGTCTCTTCTGTGCAGAAATTCAGGGCAAG...AAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | CATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTACCCACAGCCTAGGCTaGATTTATTCCACAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: HSSEGLGTEMDVWRRRWLTHSLG*IYSTES Trigger: AGATTCTGTGGAATAAATCCAGCCTAGGCTGTGGGT...AAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | CATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTCAGCTGAGTGGATGGTaGGGTAAGATCAAGAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HSSEGLGTEMDVWRRRWLQLSGW*GKIKKE Trigger: TTCTTTCTTGATCTTACCCCACCATCCACTCAGCTG...AAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | TCATCTTGGGATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTAAAGATGGGCTGTCCTaGTGTGGTGGAGGTGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SSWDSDIRVRVLVQKWMFKDGLS*CGGGGY Trigger: ATAGCCACCTCCACCACATCAGGACAGCCCATCTTT...AAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR GCA 90 bp | TCATCTTGGGATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTAGCATAGGATTTGGGTaGTGCCTCCCGTTGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSWDSDIRVRVLVQKWMFSIGFG*CLPLWV Trigger: AACCCACAACGGGAGGCAGCACCCAAATCCTATGCT...AAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | AGTAGCTTGCTGCTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTCTTTGTCCTTCTTCCTaGGATGGTGATGTTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLLCGNSGAMLSDLPILCPSS*DGDVER Trigger: CCTTTCAACATCACCATCTCAGGAAGAAGGACAAAG...AATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR GCA 90 bp | CTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACAGCATAGGATTTGGGTaGTGCCTCCCGTTGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LCGNSGAMLSDLPIFHENSIGFG*CLPLWV Trigger: AACCCACAACGGGAGGCAGCACCCAAATCCTATGCT...GTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CCA 90 bp | CATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAGGTTGCTGCCTCCCGTTGTaGGTTCATGATGTCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HESTSLHHGLAKGIGMEGCCLPL*VHDVFR Trigger: TCTGAAGACATCATGAACCCACAACGGGAGGCAGCA...ACCTTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | AGTAGCTTGCTGCTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCTACATCCTTCCTaGCATTCCTATGTTGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SSLLLCGNSGAMLSDLPIFLHPS*HSYVGP Trigger: CGGACCAACATAGGAATGCCAGGAAGGATGTAGAAA...AATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CCA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAACTTGATTCTCTATCCTaGAACCAGCCACCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: CHESTSLHHGLAKGIGMELDSLS*NQPPTA Trigger: GGCTGTGGGTGGCTGGTTCCAGGATAGAGAATCAAG...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR CAA 72 bp | GGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTaGGATAGTAAGAATGAGGTAAGCTATGGATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GTEMDVWRRRWL*DSKNEVSYGWA Trigger: AGCCCATCCATAGCTTACCTCATTCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | TGTAGTCCAAATCTACTCCTAAAAAGACTCCGACCTTCTCTAGCTTTACAGGTACCCGTTGTGGGTTCATaGTGTCTTCAGAGCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: CSPNLLLKRLRPSLALQVPVVGS*CLQSLL Trigger: CAAAAGGCTCTGAAGACATCATGAACCCACAACGGG...TACCTGTAAAGCTAGAGAAGGTCGGAGTCTTTTTAGGAGTAGATTTGGACTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR TCA 90 bp | CATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAGGTAAGCTATGGATGGGCTaGACTGCTAGTGAACTCAGT | + |
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Preference number: 4 (lower is better) Translates to: HESTSLHHGLAKGIGMEGKLWMG*TASELS Trigger: ACTGAGTTCACTAGCAGTTCAGCCCATCCATAGCTT...ACCTTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | GGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTGCTGCCTCCCGTTGTaGGTTCATGATGTCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GNSGAMLSDLPIFHENLDCCLPL*VHDVFR Trigger: TCTGAAGACATCATGAACCCACAACGGGAGGCAGCA...GTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CCA 90 bp | TCATCTTGGGATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTTGGCAGCTGAGTGGATaGTGGGGTAAGATCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSWDSDIRVRVLVQKWMFWQLSG*WGKIKK Trigger: TTTCTTGATCTTACCCCACCATCCACTCAGCTGCCA...AAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | AGTAGCTTGCTGCTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTAGAGATCTTTTCCCTTaGTTCCCAGGTAAACCATAT | + |
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Preference number: 4 (lower is better) Translates to: SSLLLCGNSGAMLSDLPIRDLFP*FPGKPY Trigger: ATATGGTTTACCTGGGAATCAAGGGAAAAGATCTCT...AATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR TCA 90 bp | TCATCTTGGGATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTAAAGTAGGCTTGCCCTaGATTTCTGCACAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSWDSDIRVRVLVQKWMFKVGLP*ISAQKR Trigger: TCTCTTCTGTGCAGAAATTCAGGGCAAGCCTACTTT...AAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAGAGGTAAGCTATGGATaGGCTGAACTGCTAGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CHESTSLHHGLAKGIGMEEVSYG*AELLVN Trigger: GTTCACTAGCAGTTCAGCCCATCCATAGCTTACCTC...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | GTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGATAGTAAGACTTCAGAGCCTTTTGTaGAGAGAACAAGATAGATCA | + |
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Preference number: 4 (lower is better) Translates to: VLVQKWMFGGGGGFWIVRLQSLL*REQDRS Trigger: TGATCTATCTTGTTCTCTTCACAAAAGGCTCTGAAG...TCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAATGACTCTGACAGCTTaGTTCTCTATCCTGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: CHESTSLHHGLAKGIGMEMTLTA*FSILEP Trigger: TGGTTCCAGGATAGAGAATCAAGCTGTCAGAGTCAT...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | AGTAGCTTGCTGCTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTAAACACTCTAAGGACTaGACAAAACACATTTACAGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLLCGNSGAMLSDLPIKHSKD*TKHIYR Trigger: CCTGTAAATGTGTTTTGTCCAGTCCTTAGAGTGTTT...AATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CCA 90 bp | TCATCTTGGGATAGTGACATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGTTTGGAGGAGGAGGTaGCTTTTGGATAGTAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SSWDSDIRVRVLVQKWMFVWRRR*LLDSKN Trigger: ATTCTTACTATCCAAAAGCCACCTCCTCCTCCAAAC...AAACATCCATTTCTGTACCAAGACCCTCACTCGAATGTCACTATCCCAAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| 3UTR CAA 72 bp | ATCAGGAAAAGAAATAACAGATTGAGCTCTAGTAGCTaGCTGCTCTGTGGGAATTCAGGAGCAATGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: IRKRNNRLSSSS*LLCGNSGAMLS Trigger: AGACAACATTGCTCCTGAATTCCCACAGAGCAGCAAGCTACTAGAGCTCAATCTGTTATTTCTTTTCCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR TCA 90 bp | CATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAGGTAGAGATCTTTTCCCTTaGTTCCCAGGTAAACCATAT | + |
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Preference number: 4 (lower is better) Translates to: HESTSLHHGLAKGIGMEGRDLFP*FPGKPY Trigger: ATATGGTTTACCTGGGAATCAAGGGAAAAGATCTCT...ACCTTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | GGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTAAAGTAGGCTTGCCCTaGATTTCTGCACAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GIQEQCCLIFPFFMKTLTKVGLP*ISAQKR Trigger: TCTCTTCTGTGCAGAAATTCAGGGCAAGCCTACTTT...AGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR TCA 90 bp | GGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTTTATCTTGGGAGCCCTaGAGCTTAAGCTGCAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: GIQEQCCLIFPFFMKTLTLSWEP*SLSCKV Trigger: TACTTTGCAGCTTAAGCTTCAGGGCTCCCAAGATAA...AGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR GCA 90 bp | TGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTCTTGCCCTGAATTTCTaGACAGAAGAGACAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: CGNSGAMLSDLPIFHENLLALNF*TEETEI Trigger: GATCTCTGTCTCTTCTGTGCAGAAATTCAGGGCAAG...AAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR GCA 90 bp | AAATGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAGAAAGGGCTTCTGTaGTTTCTTCTCCACATACAG | + |
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Preference number: 4 (lower is better) Translates to: KCHESTSLHHGLAKGIGMEKGLL*FLLHIQ Trigger: CTGTATGTGGAGAAGAAAGCACAGAAGCCCTTTCTC...CATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CCA 90 bp | TGTAGTCCAAATCTACTCCTAAAAAGACTCCGACCTTCTCTAGCTTTACAGGTACTATGTTGGTCCGCATaGATGAGAAATCTTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CSPNLLLKRLRPSLALQVLCWSA*MRNLCP Trigger: AGGACAAAGATTTCTCATCCATGCGGACCAACATAG...TACCTGTAAAGCTAGAGAAGGTCGGAGTCTTTTTAGGAGTAGATTTGGACTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CCA 90 bp | GGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTCTGGCATTCCTATGTTaGTCCGCATGGATGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GIQEQCCLIFPFFMKTLTLAFLC*SAWMRN Trigger: ATTTCTCATCCATGCGGACCAACATAGGAATGCCAG...AGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CCA 90 bp | CATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAGGTACTGAAAGACAGAAGTaGAGCCTTCTTTATTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: HESTSLHHGLAKGIGMEGTERQK*SLLYCG Trigger: TCCACAATAAAGAAGGCTCCACTTCTGTCTTTCAGT...ACCTTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTACAGGCTATTAAATaGAGAGTGACAGGCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: LCGNSGAMLSDLPIFHENLQAIK*RVTGLM Trigger: CATTAAGCCTGTCACTCTTCATTTAATAGCCTGTAG...GTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR TCA 90 bp | AGGAAAAGAAATAACAGATTGAGCTCTAGTAGCTTGCTGCTCTGTGGGAATTCAAAAGAAATAACAGATTaGGCTCTAGTAGCTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RKRNNRLSSSSLLLCGNSKEITD*ALVACC Trigger: GCAGCAAGCTACTAGAGCTCAATCTGTTATTTCTTT...TGAATTCCCACAGAGCAGCAAGCTACTAGAGCTCAATCTGTTATTTCTTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR TCA 90 bp | TGTAGCATTTCATTGATAGCAAACCCACTCAAAGATTGTAGAGATGGGAATCTTCTTCAGAGCCTTTTGTaGAGAGAACAAGATAGATCA | + |
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Preference number: 4 (lower is better) Translates to: CSISLIANPLKDCRDGNLLQSLL*REQDRS Trigger: TGATCTATCTTGTTCTCTTCACAAAAGGCTCTGAAG...AAGATTCCCATCTCTACAATCTTTGAGTGGGTTTGCTATCAATGAAATGCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR GCA 90 bp | TGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTTCACATCCAGGTTTATaGATGTGTGAATTCCAACTA | + |
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Preference number: 4 (lower is better) Translates to: CGNSGAMLSDLPIFHENLSHPGL*MCEFQL Trigger: TAGTTGGAATTCACACATGCATAAACCTGGATGTGA...AAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGGGGTGCTGCCTCCCGTaGTGGGTTCATGATGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWGCCLP*WVHDVF Trigger: GAAGACATCATGAACCCACAACGGGAGGCAGCACCC...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CAA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGGTGGAGCCTTCTTTATaGTGGAAAAAGAGAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWVEPSL*WKKRKG Trigger: GCCCTTTCTCTTTTTCCACAATAAAGAAGGCTCCAC...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CAA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGAGGAGGAGGTGGCTTTaGGATAGTAAGAATGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWRRRWL*DSKNEV Trigger: TACCTCATTCTTACTATCCAAAAGCCACCTCCTCCT...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS GCA 90 bp | GGAGCCCTGAAGCTTAAGCTGCAAAGTAGGCTTGCCCTGAATTTCTaGACAGAAGAGACAGAGATCTTTTCCCTTGATTCCCAGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: GALKLKLQSRLALNF*TEETEIFSLDSQVN Trigger: GTTTACCTGGGAATCAAGGGAAAAGATCTCTGTCTCTTCTGTGCAGAAATTCAGGGCAAGCCTACTTTGCAGCTTAAGCTTCAGGGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACGGGTGCTGCCTCCCGTaGTGGGTTCATGATGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LCGNSGAMLSDLPIFHENGCCLP*WVHDVF Trigger: GAAGACATCATGAACCCACAACGGGAGGCAGCACCC...GTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | CATTCGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTACAGAAATGGATGTTaGGAGGAGGAGGTGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: HSSEGLGTEMDVWRRRWLYRNGC*EEEVAF Trigger: AAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTA...AAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CAA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGATTCGAGTGAGGGTCTaGGTACAGAAATGGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWIRVRV*VQKWMF Trigger: AAACATCCATTTCTGTACCAAGACCCTCACTCGAAT...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS TCA 90 bp | ACTTCTTTCTACCCACTCCTATTCCCCATTGGTCAAGGGTTCCCATaGAGCAGCTCTCTCTCACATCCAGGTTTATGCATGTGTGAATTC | + |
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Preference number: 5 (lower is better) Translates to: TSFYPLLFPIGQGFP*SSSLSHPGLCMCEF Trigger: GAATTCACACATGCATAAACCTGGATGTGAGAGAGAGCTGCTTCATGGGAACCCTTGACCAATGGGGAATAGGAGTGGGTAGAAAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | CGAGTGAGGGTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGATATTACCCTTTTCCTaGTCACTGAATTCTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: RVRVLVQKWMFGGGGGFWILPFS*SLNSVS Trigger: AGACACAGAATTCAGTGACAAGGAAAAGGGTAATAT...CCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGACCCTCACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CAA 90 bp | TTGATAGCAAACCCACTCAAAGATTGTAGAGATGGGAATCTTCCTCCCCTTATTCCTGGCATTCCTATGTaGGTCCGCATGGATGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LIANPLKDCRDGNLPPLIPGIPM*VRMDEK Trigger: TTTCTCATCCATGCGGACCAACATAGGAATGCCAGG...AATAAGGGGAGGAAGATTCCCATCTCTACAATCTTTGAGTGGGTTTGCTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | TGTCATGAATCCACATCTCTACATCATGGGTTGGCAAAAGGAATAGGAATGGAAGTTATGCCTCTCTCCTaGGTGAGAAAGATGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CHESTSLHHGLAKGIGMEVMPLS*VRKMGC Trigger: ACAGCCCATCTTTCTCACCAAGGAGAGAGGCATAAC...TTCCATTCCTATTCCTTTTGCCAACCCATGATGTAGAGATGTGGATTCATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS TCA 90 bp | TTCCTATGTTGGTCCGCATGGATGAGAAATCTTTGTCCTTCTTCCTaGGATGGTGATGTTGAAAGGAACTCTTCCACTTCTTTCTACCCA | + |
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Preference number: 5 (lower is better) Translates to: FLCWSAWMRNLCPSS*DGDVERNSSTSFYP Trigger: TGGGTAGAAAGAAGTGGAAGAGTTCCTTTCAACATCACCATCTCAGGAAGAAGGACAAAGATTTCTCATCCATGCGGACCAACATAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | GTCTTGGTACAGAAATGGATGTTTGGAGGAGGAGGTGGCTTTTGGATAGTAAGATCTCTACATCATGGGTaGGCAAAAGGAATAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: VLVQKWMFGGGGGFWIVRSLHHG*AKGIGM Trigger: CATTCCTATTCCTTTTGCCAACCCATGATGTAGAGA...TCTTACTATCCAAAAGCCACCTCCTCCTCCAAACATCCATTTCTGTACCAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS-3UTR CAA 90 bp | GGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTTTGAGCTCTAGTAGCTaGCTGCTCTGTGGGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: GIQEQCCLIFPFFMKTLTLSSSS*LLCGNS Trigger: TGAATTCCCACAGAGCAGCAAGCTACTAGAGCTCAA...AGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | GGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTATGGATGAGAAATCTTaGTCCTTCTTCCTGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: GIQEQCCLIFPFFMKTLTMDEKS*SFFLRW Trigger: CCATCTCAGGAAGAAGGACAAAGATTTCTCATCCAT...AGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | AAGGACTGGACAAAACACATTTACAGGTTATGTAGTCCAAATCTACTCCTAAAACCTGAGATGGTGATGTaGAAAGGAACTCTTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: KDWTKHIYRLCSPNLLLKPEMVM*KGTLPL Trigger: AAGTGGAAGAGTTCCTTTCAACATCACCATCTCAGG...TTTTAGGAGTAGATTTGGACTACATAACCTGTAAATGTGTTTTGTCCAGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTGGGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACAAAAGAAATAACAGATaGAGCTCTAGTAGCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LCGNSGAMLSDLPIFHENKRNNR*SSSSLL Trigger: CAGCAAGCTACTAGAGCTCAATCTGTTATTTCTTTT...GTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCCCACAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS-3UTR CAA 90 bp | GGAATTCAGGAGCAATGTTGTCTGATCTTCCCATTTTTCATGAAAACCTTGACTATATTACCCTTTTCCTaGTCACTGAATTCTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GIQEQCCLIFPFFMKTLTILPFS*SLNSVS Trigger: AGACACAGAATTCAGTGACAAGGAAAAGGGTAATAT...AGTCAAGGTTTTCATGAAAAATGGGAAGATCAGACAACATTGCTCCTGAATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS TCA 72 bp | TATGCCTCTCTCCTTGGTGAGAAAGATGGGCTGTCCTaGTGTGGTGGAGGTGGCTATGAACCAGCCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: YASLLGEKDGLS*CGGGGYEPARV Trigger: TACCCTGGCTGGTTCATAGCCACCTCCACCACATCAGGACAGCCCATCTTTCTCACCAAGGAGAGAGGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS TCA 72 bp | GGTGGAGGTGGCTATGAACCAGCCAGGGTAAGAGACTaGCTGAAAGACAGAAGTGGAGCCTTCTTTATTGTG | + |
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Preference number: 6 (lower is better) Translates to: GGGGYEPARVRD*LKDRSGAFFIV Trigger: CACAATAAAGAAGGCTCCACTTCTGTCTTTCAGTCAGTCTCTTACCCTGGCTGGTTCATAGCCACCTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327407.2 |
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| CDS CAA 90 bp | TTGAAAGGAACTCTTCCACTTCTTTCTACCCACTCCTATTCCCCATaGGTCAAGGGTTCCCATGAAGCAGCTCTCTCTCACATCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LKGTLPLLSTHSYSP*VKGSHEAALSHIQV Trigger: AACCTGGATGTGAGAGAGAGCTGCTTCATGGGAACCCTTGACCAATGGGGAATAGGAGTGGGTAGAAAGAAGTGGAAGAGTTCCTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS CCA 72 bp | CCCCTTATTTCTACATCCTTCCTGGCATTCCTATGTTaGTCCGCATGGATGAGAAATCTTTGTCCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLISTSFLAFLC*SAWMRNLCPSS Trigger: GGAAGAAGGACAAAGATTTCTCATCCATGCGGACCAACATAGGAATGCCAGGAAGGATGTAGAAATAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS TCA 72 bp | TGGTCCGCATGGATGAGAAATCTTTGTCCTTCTTCCTaGGATGGTGATGTTGAAAGGAACTCTTCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSAWMRNLCPSS*DGDVERNSSTS Trigger: AGAAGTGGAAGAGTTCCTTTCAACATCACCATCTCAGGAAGAAGGACAAAGATTTCTCATCCATGCGGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS GCA 72 bp | AAGCTTAAGCTGCAAAGTAGGCTTGCCCTGAATTTCTaGACAGAAGAGACAGAGATCTTTTCCCTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: KLKLQSRLALNF*TEETEIFSLDS Trigger: GGAATCAAGGGAAAAGATCTCTGTCTCTTCTGTGCAGAAATTCAGGGCAAGCCTACTTTGCAGCTTAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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| CDS CAA 72 bp | TCCCCTTATTTCTACATCCTTCCTGGCATTCCTATGTaGGTCCGCATGGATGAGAAATCTTTGTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPYFYILPGIPM*VRMDEKSLSFF Trigger: GAAGAAGGACAAAGATTTCTCATCCATGCGGACCAACATAGGAATGCCAGGAAGGATGTAGAAATAAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259213.9 |
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