RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL2RA (Homo sapiens)

Ensembl gene IDs: ENSG00000134460

Ensembl transcript IDs: ENST00000256876.10, ENST00000379954.5, ENST00000379959.8, ENST00000447847.1, ENST00000644262.1, ENST00000649218.1

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGAGAGTTCTAGTGGTTTTGCCCTTCCTCTTCAACGGCGAAATTaGTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATGGGACTGAGC +
Preference number: 1 (lower is better)
Translates to: MESSSGFALPLQRRN*YLEVGSARSLMGLS
Trigger: GCTCAGTCCCATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGCAAAACCACTAGAACTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CCA 90 bp TGGGACCTCATTCATCCTTCTGTTCCTGACATTGCCTCATGGGTTTaGCTGCCCCGTTTTGAAGTTACCCAAAGATTATTCTGCCATGGC +
Preference number: 1 (lower is better)
Translates to: WDLIHPSVPDIASWV*LPRFEVTQRLFCHG
Trigger: GCCATGGCAGAATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAGGATGAATGAGGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR GCA 90 bp ACCTCATTCATCCTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTaGCCCGTTTTGAAGTTACCCAAAGATTATTCTGCCATGGCCTCT +
Preference number: 1 (lower is better)
Translates to: TSFILLFLTLPHGFG*PVLKLPKDYSAMAS
Trigger: AGAGGCCATGGCAGAATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAGGATGAATGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CCA 90 bp GTGGGCGTGCAGAGCAATAACACAATGGTTCTCAAAGTGTGTTCCTaGAATAGTAGCAGCAGCAACAGCACCTGGGAATTGTTAGACACA +
Preference number: 1 (lower is better)
Translates to: VGVQSNNTMVLKVCS*NSSSSNSTWELLDT
Trigger: TGTGTCTAACAATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTTATTGCTCTGCACGCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR TCA 90 bp TCTCCTGGGCGACCATTTAGCACCTTTGATTTCACTTGGGCTTCATaGCTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGT +
Preference number: 1 (lower is better)
Translates to: SPGRPFSTFDFTWAS*LLLSVPGFLPRNSC
Trigger: ACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAATCAAAGGTGCTAAATGGTCGCCCAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CCA 90 bp GTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTaGGAATTGTTAGACACACAAAACATTTGGCTCTATTCCAGACCA +
Preference number: 1 (lower is better)
Translates to: VLKVCSWNSSSSNST*ELLDTQNIWLYSRP
Trigger: TGGTCTGGAATAGAGCCAAATGTTTTGTGTGTCTAACAATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR GCA 90 bp CCTCCATCCCTTCTCCCTCTTCACTTCCTTCTTTCTTTCCTTCCTTaGATAAACATTGAATGTACGGATCCCTTTTTGGTGTTTTTAGAC +
Preference number: 1 (lower is better)
Translates to: PPSLLPLHFLLSFLP*INIECTDPFLVFLD
Trigger: GTCTAAAAACACCAAAAAGGGATCCGTACATTCAATGTTTATGCAAGGAAGGAAAGAAAGAAGGAAGTGAAGAGGGAGAAGGGATGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR TCA 90 bp TGTATGTGGTTGGTCACAGAAATGACAGAAAATAGTTATTTAATCTaGATCTGGACCCTGCTGAAAACTGCCGTGATTTCTCATAACACT +
Preference number: 1 (lower is better)
Translates to: CMWLVTEMTENSYLI*IWTLLKTAVISHNT
Trigger: AGTGTTATGAGAAATCACGGCAGTTTTCAGCAGGGTCCAGATTCAGATTAAATAACTATTTTCTGTCATTTCTGTGACCAACCACATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR TCA 90 bp CAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGCTGCCCCGTGTCCTGTaGTGTGACTTCAGAGCTTCC +
Preference number: 2 (lower is better)
Translates to: QRERENQQSEAAEKGTTQLPRVL*CDFRAS
Trigger: GGAAGCTCTGAAGTCACATCACAGGACACGGGGCAG...CTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CAA 90 bp GCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCACCTTaGATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCT +
Preference number: 2 (lower is better)
Translates to: AGKHNGCLLGDHLAP*ISLGLHDFCCLFPA
Trigger: AGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAATCAAAGGTGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR TCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTCCGTGTCCTGTGATGTaGCTTCAGAGCTTCCAAAAC +
Preference number: 2 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSPCPVM*LQSFQN
Trigger: GTTTTGGAAGCTCTGAAGTCACATCACAGGACACGG...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR CCA 90 bp TGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATCTGGTCTCAAACTCCTaGCCTCAAGAGATGCTCCCG +
Preference number: 2 (lower is better)
Translates to: WFSKCVPGIVAAATAPGNLVSNS*PQEMLP
Trigger: CGGGAGCATCTCTTGAGGCCAGGAGTTTGAGACCAG...ATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR TCA 90 bp CAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACTGGGAAGTTGGAATaGGATGAATGTAAACCTACT +
Preference number: 2 (lower is better)
Translates to: QRERENQQSEAAEKGTTQTGKLE*DECKPT
Trigger: AGTAGGTTTACATTCATCTCATTCCAACTTCCCAGT...CTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR TCA 90 bp AACACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTCATCCTTCTGTTCCTaGCATTGCCTCATGGGTTTG +
Preference number: 2 (lower is better)
Translates to: NTMVLKVCSWNSSSSNSTSSFCS*HCLMGL
Trigger: CAAACCCATGAGGCAATGTCAGGAACAGAAGGATGA...GGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR GCA 90 bp TGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATCTTCAACGGCGAAATTaGTATTTAGAAGTGGGTAGC +
Preference number: 2 (lower is better)
Translates to: WFSKCVPGIVAAATAPGNLQRRN*YLEVGS
Trigger: GCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG...ATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR CCA 90 bp TCCCTTTTTGGTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCCTGACATTGCCTCATaGGTTTGGCTGCCCCGTTTT +
Preference number: 2 (lower is better)
Translates to: SLFGVFRHFSGNVRIDLHPDIAS*VWLPRF
Trigger: AAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGG...GTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACACCAAAAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR TCA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACTGGGAAGTTGGAATaGGATGAATGTAAACCTACT +
Preference number: 2 (lower is better)
Translates to: FIRQRERENQQSEAAEKGTGKLE*DECKPT
Trigger: AGTAGGTTTACATTCATCTCATTCCAACTTCCCAGT...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR GCA 90 bp CCTGTAAACATCAAATTAGTGCAGGCCAAATTCAGGGTATCATTCATAGCAATCCCTCATGGGTTTGGCTaGCCCGTTTTGAAGTTACCC +
Preference number: 2 (lower is better)
Translates to: PVNIKLVQAKFRVSFIAIPHGFG*PVLKLP
Trigger: GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGG...GATTGCTATGAATGATACCCTGAATTTGGCCTGCACTAATTTGATGTTTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR CAA 90 bp AAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATaGTTAGACACACAAAACATTTGGCTCTATTCCAGACCAACAACT +
Preference number: 2 (lower is better)
Translates to: KVCSWNSSSSNSTWE*LDTQNIWLYSRPTT
Trigger: AGTTGTTGGTCTGGAATAGAGCCAAATGTTTTGTGTGTCTAACAATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR CCA 90 bp TTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTATACTACATATAGGGTaGAGAGAGTTCCATACCATT +
Preference number: 2 (lower is better)
Translates to: LCIYVSAGAFLGTPELGSILHIG*REFHTI
Trigger: AATGGTATGGAACTCTCTCCACCCTATATGTAGTAT...ACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CAA 90 bp CTTTTTGGTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTaGCACCTTGTGTGTCCACCTGTAAACATCAAATTAGTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: LFGVFRHFSGNVRID*HLVCPPVNIKLVQA
Trigger: GGCCTGCACTAATTTGATGTTTACAGGTGGACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACACCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR CCA 90 bp TTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCATACTACATATAGGGTaGAGAGAGTTCCATACCATT +
Preference number: 2 (lower is better)
Translates to: LYRVECVCCVFTLVLGLSILHIG*REFHTI
Trigger: AATGGTATGGAACTCTCTCCACCCTATATGTAGTAT...GGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTACCCTATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR TCA 72 bp GGCATAGAGACAAGGTTGCCACTGCCCCGTGTCCTGTaGTGTGACTTCAGAGCTTCCAAAACGCAGGCAAGC +
Preference number: 3 (lower is better)
Translates to: GIETRLPLPRVL*CDFRASKTQAS
Trigger: GCTTGCCTGCGTTTTGGAAGCTCTGAAGTCACATCACAGGACACGGGGCAGTGGCAACCTTGTCTCTATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR CAA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAGGCATAGAGACAAGGTaGCCACTGCCCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: FIRQRERENQQSEAAEKGGIETR*PLPRVL
Trigger: CAGGACACGGGGCAGTGGCAACCTTGTCTCTATGCC...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR CAA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTAGAGTTCTAGTGGTTTaGCCCTTCCTCTTCAACGGC +
Preference number: 3 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSRVLVV*PFLFNG
Trigger: GCCGTTGAAGAGGAAGGGCAAAACCACTAGAACTCT...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR-3UTR CAA 90 bp TGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATAGAGTTCTAGTGGTTTaGCCCTTCCTCTTCAACGGC +
Preference number: 3 (lower is better)
Translates to: WFSKCVPGIVAAATAPGNRVLVV*PFLFNG
Trigger: GCCGTTGAAGAGGAAGGGCAAAACCACTAGAACTCT...ATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR GCA 72 bp TCTAGTGGTTTTGCCCTTCCTCTTCAACGGCGAAATTaGTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: SSGFALPLQRRN*YLEVGSARSLM
Trigger: CATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGCAAAACCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR GCA 72 bp ATCCTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTaGCCCGTTTTGAAGTTACCCAAAGATTATTCTGCC +
Preference number: 3 (lower is better)
Translates to: ILLFLTLPHGFG*PVLKLPKDYSA
Trigger: GGCAGAATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR GCA 72 bp AGAATGTTGACTCAACTGATTCGTGAGGGGAGATCTTaGACCAGATATGGAACCAGGACTTCCACCGAAATC +
Preference number: 3 (lower is better)
Translates to: RMLTQLIREGRS*TRYGTRTSTEI
Trigger: GATTTCGGTGGAAGTCCTGGTTCCATATCTGGTGCAAGATCTCCCCTCACGAATCAGTTGAGTCAACATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR CAA 90 bp CTTTATACTACATATAGGGTGGAGAGAGTTCCATACCATTCATGCTTTAATGAAGGCATAGAGACAAGGTaGCCACTGCCCCGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: LYTTYRVERVPYHSCFNEGIETR*PLPRVL
Trigger: CAGGACACGGGGCAGTGGCAACCTTGTCTCTATGCC...TTCATTAAAGCATGAATGGTATGGAACTCTCTCCACCCTATATGTAGTATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR TCA 72 bp CGACCATTTAGCACCTTTGATTTCACTTGGGCTTCATaGCTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGA +
Preference number: 3 (lower is better)
Translates to: RPFSTFDFTWAS*LLLSVPGFLPR
Trigger: TCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAATCAAAGGTGCTAAATGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CCA 72 bp CAGAGCAATAACACAATGGTTCTCAAAGTGTGTTCCTaGAATAGTAGCAGCAGCAACAGCACCTGGGAATTG +
Preference number: 3 (lower is better)
Translates to: QSNNTMVLKVCS*NSSSSNSTWEL
Trigger: CAATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTTATTGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR CAA 90 bp GGCGTGCAGAGCAATAACACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCTTTGGCTGCCCCGTTTaGAAGTTACCCAAAGATTAT +
Preference number: 3 (lower is better)
Translates to: GVQSNNTMVLKVCSWNSSFGCPV*KLPKDY
Trigger: ATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAA...GCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTTATTGCTCTGCACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR-3UTR CAA 90 bp GGCGTGCAGAGCAATAACACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGACACACAAAACATTaGGCTCTATTCCAGACCAAC +
Preference number: 3 (lower is better)
Translates to: GVQSNNTMVLKVCSWNSSRHTKH*ALFQTN
Trigger: GTTGGTCTGGAATAGAGCCAAATGTTTTGTGTGTCT...GCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTTATTGCTCTGCACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR CCA 72 bp GTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTaGGAATTGTTAGACACACAAAACATTTGGCTCTAT +
Preference number: 3 (lower is better)
Translates to: VCSWNSSSSNST*ELLDTQNIWLY
Trigger: ATAGAGCCAAATGTTTTGTGTGTCTAACAATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR GCA 72 bp CTTCTCCCTCTTCACTTCCTTCTTTCTTTCCTTCCTTaGATAAACATTGAATGTACGGATCCCTTTTTGGTG +
Preference number: 3 (lower is better)
Translates to: LLPLHFLLSFLP*INIECTDPFLV
Trigger: CACCAAAAAGGGATCCGTACATTCAATGTTTATGCAAGGAAGGAAAGAAAGAAGGAAGTGAAGAGGGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR CCA 72 bp GGAGGGGGAGAGTGCACAGATGAGTCTGTTTGTATGTaGTTGGTCACAGAAATGACAGAAAATAGTTATTTA +
Preference number: 3 (lower is better)
Translates to: GGGECTDESVCM*LVTEMTENSYL
Trigger: TAAATAACTATTTTCTGTCATTTCTGTGACCAACCACATACAAACAGACTCATCTGTGCACTCTCCCCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GGTAGCGCTCGCTCTCTGATGGGACTGAGCTGGCATAGAGACAAGGTTGCCACTGAAGATCGGTCCGCCTaGGCTGTCACCCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSARSLMGLSWHRDKVATEDRSA*AVTLVG
Trigger: ACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTC...AGTGGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAGAGAGCGAGCGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTGACCAGCCGGGGCAGTaGAGCGGAGGTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSDQPGQ*SGGLSL
Trigger: CAGAGAAAGACCTCCGCTTCACTGCCCCGGCTGGTC...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCCCTGCCTCAGCCTCCTaGGTGGCTAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPPASAS*VARTTG
Trigger: GCCTGTAGTCCTAGCCACTCAGGAGGCTGAGGCAGG...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GGTAGCGCTCGCTCTCTGATGGGACTGAGCTGGCATAGAGACAAGGTTGCCACTTGCAGAAGGCCCAGTTaGCGTCAGCCTCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GSARSLMGLSWHRDKVATCRRPS*RQPLFG
Trigger: GCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCA...AGTGGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAGAGAGCGAGCGCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp ATGCGCTCTTTTCCGTGGTTACGTTCTACCAGTGTGACCTCCATCCCTTCTCCCATCGTCACAGAGCTCTaGCTGGCAGCCAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: MRSFPWLRSTSVTSIPSPIVTEL*LAARHH
Trigger: ATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGACGAT...GGGAGAAGGGATGGAGGTCACACTGGTAGAACGTAACCACGGAAAAGAGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTGGCGTGTGGGATCTCTaGCGGGTCATCGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCGVWDL*RVIVTE
Trigger: CTCTGTGACGATGACCCGCCAGAGATCCCACACGCC...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGGCAGAGCTTGTGCATTaGCATTGGTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QRERENQQSEAAEKGTTQAELVH*HWLSQD
Trigger: GTCCTGGGACAACCAATGTCAATGCACAAGCTCTGC...CTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCGTCTCCGCTGCCAGGTaGGCCCACTCAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFVSAAR*AHSGGG
Trigger: TCCTCCTCCTGAGTGGGCTCACCTGGCAGCGGAGAC...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATGGGACCTTCGGGGCTTGCCTaGGGCTTCTCTTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LQRRNCYLEVGSARSLMGPSGLA*GFSSPG
Trigger: TCCAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGG...TCCCATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAACTCAGAGACTCTaGAGATGGGCCCAGCGAACT +
Preference number: 4 (lower is better)
Translates to: QRERENQQSEAAEKGTTQTTQRL*RWAQRT
Trigger: AGTTCGCTGGGCCCATCTTCAGAGTCTCTGAGTTGT...CTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTGCGGAGGTCTTTCTCTaGAGAAGGCCCAGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSAEVFL*RRPSCR
Trigger: ACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCGC...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTCCGTCAGCCTCTTTTTaGCATCGCGCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSPSASF*HRAGGC
Trigger: ACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGG...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp AGCTTCCAAAACGCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCATGTAGGCCATGGCTTTaGATGTGGCGTGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SFQNAGKHNGCLLGDHLACRPWL*MWRVGS
Trigger: AGATCCCACACGCCACATTCAAAGCCATGGCCTACA...TGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGCGTTTTGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCTCAGGAGGAGGACGCTaGTCAGCAGGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPSGGGR*SAGKHS
Trigger: GCTGTGTTTTCCTGCTGATCAGCGTCCTCCTCCTGA...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGACCTTCGGGGCTTGCCTaGGGCTTCTCTTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: FIRQRERENQQSEAAEKGPSGLA*GFSSPG
Trigger: TCCAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGG...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATCTTGCACCAGATATGGAACCAGGACTTCCACCGAAATCTTAGCTCTGGAAGTCCGGAGGATGTGGGATaGGAAGATCGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILHQIWNQDFHRNLSSGSPEDVG*EDRSAW
Trigger: CCAGGCGGACCGATCTTCCCATCCCACATCCTCCGG...ACTTCCAGAGCTAAGATTTCGGTGGAAGTCCTGGTTCCATATCTGGTGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTGGGCTGTCACCCTTGTaGGTCCATCCAGTCTCTATC +
Preference number: 4 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSGLSPL*VHPVSI
Trigger: GATAGAGACTGGATGGACCCACAAGGGTGACAGCCC...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTGACCAGCCGGGGCAGTaGAGCGGAGGTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLHDFCCLFPASYQEILVDQPGQ*SGGLSL
Trigger: CAGAGAAAGACCTCCGCTTCACTGCCCCGGCTGGTC...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTGACCAGCCGGGGCAGTaGAGCGGAGGTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIDQPGQ*SGGLSL
Trigger: CAGAGAAAGACCTCCGCTTCACTGCCCCGGCTGGTC...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTGGAGGTTCCCTGCAGTaGCCTGGAAGGCTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIGGSLQ*PGRLAW
Trigger: CCAAGCGAGCCTTCCAGGTCACTGCAGGGAACCTCC...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR TCA 90 bp CAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGTTCACTTGGGCTTCATaGCTTCTGTTGTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QRERENQQSEAAEKGTTQFTWAS*LLLSVP
Trigger: GGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAA...CTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp AGCTTCCAAAACGCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCACCGTGTCCTGTGATGTaGCTTCAGAGCTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: SFQNAGKHNGCLLGDHLAPCPVM*LQSFQN
Trigger: GTTTTGGAAGCTCTGAAGTCACATCACAGGACACGG...TGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGCGTTTTGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGCCCCGTGTCCTGTaGTGTGACTTCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VECVCCVFTLVLGLSLGLLPRVL*CDFRAS
Trigger: GGAAGCTCTGAAGTCACATCACAGGACACGGGGCAG...GAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTCCTCTGTCTCCGCTaGCAGGTGAGCCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFFLCLR*QVSPLR
Trigger: CCTGAGTGGGCTCACCTGGCAGCGGAGACAGAGGAA...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAACCGGAGGATGTGGGATaGGAAGATCGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEPEDVG*EDRSAW
Trigger: CCAGGCGGACCGATCTTCCCATCCCACATCCTCCGG...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTCGCGCCGGAGGATGTaGGATGGGAAGATCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLSRRRM*DGKIGP
Trigger: CGGACCGATCTTCCCATCCCACATCCTCCGGCGCGA...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTTCGCGCCGGAGGATGTaGGATGGGAAGATCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LGLHDFCCLFPASYQEILSRRRM*DGKIGP
Trigger: CGGACCGATCTTCCCATCCCACATCCTCCGGCGCGA...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp AACGCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCACCTTTGATTTTTGAATGTGGCGTGTaGGATCTCTGGCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: NAGKHNGCLLGDHLAPLIFECGV*DLWRVI
Trigger: GATGACCCGCCAGAGATCCCACACGCCACATTCAAA...AATCAAAGGTGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCCTGGAAGGCTCGCTTaGTCCACTGGCTGCATTGGA +
Preference number: 4 (lower is better)
Translates to: VECVCCVFTLVLGLSLGLPGRLA*STGCIG
Trigger: TCCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGG...GAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCCCTGACATTGCCTCATaGGTTTGGCTGCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPPDIAS*VWLPRF
Trigger: AAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGG...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCAAAGATTATTCTGCCGGTCTCCTAGGGAGCTaGGGTTATAGGCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPHGFGCPVLKLPKDYSAGLLGS*GYRPEP
Trigger: TGGCTCAGGCCTATAACCCCAGCTCCCTAGGAGACC...GGCAGAATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTGGAGTTGAGAGTGGGTaGGCGTGCAGAGCAATAACA +
Preference number: 4 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSGVESG*ACRAIT
Trigger: TGTTATTGCTCTGCACGCCCACCCACTCTCAACTCC...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCCCTTCGGGGCTTGCCTaGGGCTTCTCTTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFPSGLA*GFSSPV
Trigger: CACAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGG...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256876.10
CDS-3UTR TCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTGTCTCCGCTGCCAGGTaGGCCCACTCAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVVSAAR*AHSGGG
Trigger: TCCTCCTCCTGAGTGGGCTCACCTGGCAGCGGAGAC...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGGTCTCCGCTGCCAGGTaGGCCCACTCAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: MTSVVCSRLLTKKFLFFWVSAAR*AHSGGG
Trigger: TCCTCCTCCTGAGTGGGCTCACCTGGCAGCGGAGAC...CCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCGCAGTCAGAAGCGGCTaGGAAAGGAACCACGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFAVRSG*ERNHAD
Trigger: GTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGC...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTGAGCCAAGGGTAAAATaGTTTCTGGGTAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSEPRVK*FLGSSP
Trigger: TGGGCTGCTACCCAGAAATCATTTTACCCTTGGCTC...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGATGCAGAAGGCCCAGTTaGCGTCAGCCTCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: FIRQRERENQQSEAAEKGCRRPS*RQPLFG
Trigger: GCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCA...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTACGGCCTTCGGGGCTTaGCTGAGGCTTCTCTTCACC +
Preference number: 4 (lower is better)
Translates to: LGLHDFCCLFPASYQEILTAFGA*LRLLFT
Trigger: GGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGT...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAATTCCTCTGTCTCCGCTaGCAGGTGAGCCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEFLCLR*QVSPLR
Trigger: CCTGAGTGGGCTCACCTGGCAGCGGAGACAGAGGAA...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTTTGTCCCAGGACGAGTaGCTAGAGTTTCCTGTACAG +
Preference number: 4 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCLSQDE*LEFPVQ
Trigger: CTGTACAGGAAACTCTAGCCACTCGTCCTGGGACAA...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAGAAGATCGGTCCGCCTaGGCTGTCACCCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEEDRSA*AVTLVG
Trigger: ACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTC...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGATGAATCCATCTTCCTaGCCCTTGGGACCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLMNPSS*PLGPAG
Trigger: CCCGGCTGGTCCCAAGGGTCAGGAAGATGGATTCAT...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAAATGAATCCATCTTCCTaGCCCTTGGGACCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: FHLGFMTSVVCSRLLTKKMNPSS*PLGPAG
Trigger: CCCGGCTGGTCCCAAGGGTCAGGAAGATGGATTCAT...TTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGTGTAGGCCATGGCTTTaGATGTGGCGTGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: TMVLKVCSWNSSSSNSTWCRPWL*MWRVGS
Trigger: AGATCCCACACGCCACATTCAAAGCCATGGCCTACA...CCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAGCAGTCAGAAGCGGCTaGGAAAGGAACCACGCAGAC +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEAVRSG*ERNHAD
Trigger: GTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGC...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTTCATCCTTCTGTTCCTaGCATTGCCTCATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSSSFCS*HCLMGL
Trigger: CAAACCCATGAGGCAATGTCAGGAACAGAAGGATGA...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTTCTTCACCTGGAAACTaGCTGGTCTCCATTTCACCT +
Preference number: 4 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCSSPGN*LVSISP
Trigger: AGGTGAAATGGAGACCAGTCAGTTTCCAGGTGAAGA...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTGGTGCCATCATGACTaGCTGCAGCCTCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFWCHHD*LQPRTP
Trigger: AGGAGTTCGAGGCTGCAGTCAGTCATGATGGCACCA...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTATCGTCACAGAGCTCTaGCTGGCAGCCAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GLHDFCCLFPASYQEILVIVTEL*LAARHH
Trigger: ATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGACGAT...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp AACGCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCACCTTTGATTGCTTGGTCCACTGGCTaGATTGGACTTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: NAGKHNGCLLGDHLAPLIAWSTG*IGLCIS
Trigger: AGAAATGCAAAGTCCAATGCAGCCAGTGGACCAAGC...AATCAAAGGTGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp TTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAAATGGTGGAGGTTCCCTaGAGTGACCTGGAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: FHLGFMTSVVCSRLLTKKMVEVP*SDLEGS
Trigger: CGAGCCTTCCAGGTCACTGCAGGGAACCTCCACCAT...TTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR GCA 90 bp GGCGTGCAGAGCAATAACACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGACAAGGTTGCCACTaGCCCGTGTCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: GVQSNNTMVLKVCSWNSSRQGCH*PVSCDV
Trigger: CACATCACAGGACACGGGGCAGTGGCAACCTTGTCT...GCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTTATTGCTCTGCACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp ATCTTGCACCAGATATGGAACCAGGACTTCCACCGAAATCTTAGCTCTGGAAGTGGGGGAGGGGGAGAGTaGACAGATGAGTCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: ILHQIWNQDFHRNLSSGSGGGGE*TDESVC
Trigger: ACAAACAGACTCATCTGTGCACTCTCCCCCTCCCCC...ACTTCCAGAGCTAAGATTTCGGTGGAAGTCCTGGTTCCATATCTGGTGCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCCGTCAGCCTCTTTTTaGCATCGCGCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GLHDFCCLFPASYQEILVPSASF*HRAGGC
Trigger: ACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGG...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCCCGTCAGCCTCTTTTTaGCATCGCGCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFPSASF*HRAGGC
Trigger: ACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGG...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTCACAGAGCTCTGCCTaGCAGCCAGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLSQSSA*QPGTMM
Trigger: CATCATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGA...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp AACGCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCACCTTTGATTGTCCACTGGCTGCATTaGACTTTGCATTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: NAGKHNGCLLGDHLAPLIVHWLH*TLHFCG
Trigger: ACCACAGAAATGCAAAGTCCAATGCAGCCAGTGGAC...AATCAAAGGTGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTGCTCGCTTGGTCCACTaGCTGCATTGGACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LCIYVSAGAFLGTPELGSARLVH*LHWTLH
Trigger: ATGCAAAGTCCAATGCAGCCAGTGGACCAAGCGAGC...ACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAAGCTCGCTTGGTCCACTaGCTGCATTGGACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: VCVLCIYVSAGAFLGTPEARLVH*LHWTLH
Trigger: ATGCAAAGTCCAATGCAGCCAGTGGACCAAGCGAGC...TTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCCCTGGAAGGCTCGCTTaGTCCACTGGCTGCATTGGA +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFPGRLA*STGCIG
Trigger: TCCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGG...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTTTCCCTGCAGTGACCTaGAAGGCTCGCTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GLHDFCCLFPASYQEILVFPAVT*KARLVH
Trigger: GTGGACCAAGCGAGCCTTCCAGGTCACTGCAGGGAA...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTCCCTGCAGTGACCTaGAAGGCTCGCTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFFPAVT*KARLVH
Trigger: GTGGACCAAGCGAGCCTTCCAGGTCACTGCAGGGAA...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp TTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAACCTGTGCATATGAGCTaGGGCTGGGTCCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: FHLGFMTSVVCSRLLTKKPVHMS*GWVHLV
Trigger: GACAAGGTGGACCCAGCCCCAGCTCATATGCACAGG...TTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTCCGGCCACTGCTACCTaGTACTCTGTTGTAAATATG +
Preference number: 4 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSPATAT*YSVVNM
Trigger: CATATTTACAACAGAGTACCAGGTAGCAGTGGCCGG...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTCTGATGGGACTGAGCTaGCATAGAGACAAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LCIYVSAGAFLGTPELGSLMGLS*HRDKVA
Trigger: GGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAG...ACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTATTGCCTCATGGGTTTaGCTGCCCCGTTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSIASWV*LPRFEV
Trigger: AACTTCAAAACGGGGCAGCCAAACCCATGAGGCAAT...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATCTTGCACCAGATATGGAACCAGGACTTCCACCGAAATCTTAGCTCTGGAAGTCTGGTCTCAAACTCCTaGCCTCAAGAGATGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ILHQIWNQDFHRNLSSGSLVSNS*PQEMLP
Trigger: CGGGAGCATCTCTTGAGGCCAGGAGTTTGAGACCAG...ACTTCCAGAGCTAAGATTTCGGTGGAAGTCCTGGTTCCATATCTGGTGCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp GTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCCACATCAGCAGGTATaGATCCATCTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: VECVCCVFTLVLGLSLGLPHQQV*IHLPDP
Trigger: AGGGTCAGGAAGATGGATTCATACCTGCTGATGTGG...GAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTGGAGGTTCCCTGCAGTaGCCTGGAAGGCTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFGGSLQ*PGRLAW
Trigger: CCAAGCGAGCCTTCCAGGTCACTGCAGGGAACCTCC...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATGGGATTCACTTGGGCTTCATaGCTTCTGTTGTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LQRRNCYLEVGSARSLMGFTWAS*LLLSVP
Trigger: GGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAA...TCCCATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTTGGAATCCGTGTCCTGTGATGTaGCTTCAGAGCTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: IYVSAGAFLGTPELGSWNPCPVM*LQSFQN
Trigger: GTTTTGGAAGCTCTGAAGTCACATCACAGGACACGG...ATTCCAACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTTGCGGAAACCTCTCTTaGATTCACAGTTCAACATGG +
Preference number: 4 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCCGNLS*IHSSTW
Trigger: CCATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCA...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTTCCCGTGGGTCATTTTaGAGACGCTCTCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGLHDFCCLFPASYQEILSRGSF*RRSQQD
Trigger: GTCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGA...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTCCGGAGGATGTGGGATaGGAAGATCGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFPEDVG*EDRSAW
Trigger: CCAGGCGGACCGATCTTCCCATCCCACATCCTCCGG...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCTTGTGTGTCTCACAGAGCTCTGCCTaGCAGCCAGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: VFLDTSQETYALICTLCVSQSSA*QPGTMM
Trigger: CATCATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGA...GACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTGGCGTGTGGGATCTCTaGCGGGTCATCGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LHDFCCLFPASYQEILVLGVWDL*RVIVTE
Trigger: CTCTGTGACGATGACCCGCCAGAGATCCCACACGCC...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATTTCATTTTCCCATGGTaGAGGTTCCCTGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: WFSKCVPGIVAAATAPGNFIFPW*RFPAVT
Trigger: GGTCACTGCAGGGAACCTCCACCATGGGAAAATGAA...ATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCTTGTGTGTCCATATGAGCTGGGGCTaGGTCCACCTTGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VFLDTSQETYALICTLCVHMSWG*VHLVFP
Trigger: CGGGAAGACAAGGTGGACCCAGCCCCAGCTCATATG...GACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTATATGGACGTCTCCATaGTTGCAGCCATTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCIWTSP*LQPFLS
Trigger: AGACAGAAATGGCTGCAACCATGGAGACGTCCATAT...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTCACCTGGAAACTGACTaGTCTCCATTTCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: LCIYVSAGAFLGTPELGSHLETD*SPFHLC
Trigger: GCACAGGTGAAATGGAGACCAGTCAGTTTCCAGGTG...ACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGATGCGCTCTTTTCCGTaGTTACGTTCTACCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ECVCCVFTLVLGLSLGLLMRSFP*LRSTSV
Trigger: CACACTGGTAGAACGTAACCACGGAAAAGAGCGCAT...CAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp TTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAAGCAGAGCTTGTGCATTaGCATTGGTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FHLGFMTSVVCSRLLTKKAELVH*HWLSQD
Trigger: GTCCTGGGACAACCAATGTCAATGCACAAGCTCTGC...TTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTGCAGAGCTTGTGCATTaGCATTGGTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIAELVH*HWLSQD
Trigger: GTCCTGGGACAACCAATGTCAATGCACAAGCTCTGC...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCCAGTTTCTGTTCTTCAGGTTaGGGTGTCACTTGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: ENQQSEAAEKGTTQTMSSFCSSG*GVTCFV
Trigger: AACGAAACAAGTGACACCTCAACCTGAAGAACAGAA...ACTGGACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GACAATGTCCAGTTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGCCCCGTGTCCTGTaGTGTGACTTCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DNVQLYRVECVCCVFTLVLPRVL*CDFRAS
Trigger: GGAAGCTCTGAAGTCACATCACAGGACACGGGGCAG...CACTAACGTAAATACACAACACACACACTCTACCCTATACAACTGGACATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAAAGGAAACGTACGCATTaGTTTGCACCTTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VCVLCIYVSAGAFLGTPERKRTH*FAPCVS
Trigger: GGACACACAAGGTGCAAATCAATGCGTACGTTTCCT...TTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp TTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTACGTTCTACCAGTGTaGCCTCCATCCCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LYRVECVCCVFTLVLGLSYVLPV*PPSLLP
Trigger: AGGGAGAAGGGATGGAGGTCACACTGGTAGAACGTA...GGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTACCCTATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp CATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGATCGTCACAGAGCTCTaGCTGGCAGCCAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: HDFCCLFPASYQEILVLLIVTEL*LAARHH
Trigger: ATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGACGAT...CAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTCCTGGCCTCAAGAGATaGTCCCGCCTTGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVPGLKR*SRLGLL
Trigger: TAGGAGACCAAGGCGGGAGCATCTCTTGAGGCCAGG...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp TTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCCGTGAGGGGAGATCTTaGACCAGATATGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: LYRVECVCCVFTLVLGLSREGRS*TRYGTR
Trigger: CCTGGTTCCATATCTGGTGCAAGATCTCCCCTCACG...GGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTACCCTATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTGGCGTGTGGGATCTCTaGCGGGTCATCGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFGVWDL*RVIVTE
Trigger: CTCTGTGACGATGACCCGCCAGAGATCCCACACGCC...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAGCTCGCTTGGTCCACTaGCTGCATTGGACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEARLVH*LHWTLH
Trigger: ATGCAAAGTCCAATGCAGCCAGTGGACCAAGCGAGC...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTGGCTTCATTTTCCCATaGTGGAGGTTCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIGFIFP*WRFPAV
Trigger: CACTGCAGGGAACCTCCACCATGGGAAAATGAAGCC...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTCATATGAGCTGGGGCTaGGTCCACCTTGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVHMSWG*VHLVFP
Trigger: CGGGAAGACAAGGTGGACCCAGCCCCAGCTCATATG...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAACTGATGGGACTGAGCTaGCATAGAGACAAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQELMGLS*HRDKVA
Trigger: GGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAG...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCCACATCAGCAGGTATaGATCCATCTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIPHQQV*IHLPDP
Trigger: AGGGTCAGGAAGATGGATTCATACCTGCTGATGTGG...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACAGAGCATATAGAGTaGCCCGCTTTTTATTCTGCG +
Preference number: 4 (lower is better)
Translates to: FIRQRERENQQSEAAEKGTEHIE*PAFYSA
Trigger: CGCAGAATAAAAAGCGGGTCACTCTATATGCTCTGT...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTCAGGAGGAGGACGCTaGTCAGCAGGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: MTSVVCSRLLTKKFLFFWSGGGR*SAGKHS
Trigger: GCTGTGTTTTCCTGCTGATCAGCGTCCTCCTCCTGA...CCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGCAGCCCAGAGTTCTTaGAGGATGTTTATTAGGCAA +
Preference number: 4 (lower is better)
Translates to: TMVLKVCSWNSSSSNSTWAAQSS*RMFIRQ
Trigger: TTGCCTAATAAACATCCTTCAAGAACTCTGGGCTGC...CCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTGCAGAAGGCCCAGTTaGCGTCAGCCTCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVCRRPS*RQPLFG
Trigger: GCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCA...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGCGGAGGTCTTTCTCTaGAGAAGGCCCAGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFAEVFL*RRPSCR
Trigger: ACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCGC...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTATGGTGGAGGTTCCCTaGAGTGACCTGGAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFMVEVP*SDLEGS
Trigger: CGAGCCTTCCAGGTCACTGCAGGGAACCTCCACCAT...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTCCCGTGGGTCATTTTaGAGACGCTCTCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LHDFCCLFPASYQEILVLSRGSF*RRSQQD
Trigger: GTCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGA...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR GCA 90 bp GTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCTTGTGTGTCCCTCATGGGTTTGGCTaGCCCGTTTTGAAGTTACCC +
Preference number: 4 (lower is better)
Translates to: VFLDTSQETYALICTLCVPHGFG*PVLKLP
Trigger: GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGG...GACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GGCGTGCAGAGCAATAACACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCACGTACGCATTGATTTaGACCTTGTGTGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GVQSNNTMVLKVCSWNSSTYALI*TLCVHL
Trigger: CAGGTGGACACACAAGGTGCAAATCAATGCGTACGT...GCTACTATTCCAGGAACACACTTTGAGAACCATTGTGTTATTGCTCTGCACGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTTGTGTCTTGCTATGCTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEICVLLC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAGCATAGCAAGACACA...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTTCACAGAGCTCTGCCTaGCAGCCAGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFSQSSA*QPGTMM
Trigger: CATCATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGA...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCTTGTGTGTCTTTGAATGTGGCGTGTaGGATCTCTGGCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: VFLDTSQETYALICTLCVFECGV*DLWRVI
Trigger: GATGACCCGCCAGAGATCCCACACGCCACATTCAAA...GACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATGGGAATTCACAGTTCAACATaGTTCCTTCCTTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LQRRNCYLEVGSARSLMGIHSST*FLPCRP
Trigger: TGGCCTACAAGGAAGGAACCATGTTGAACTGTGAAT...TCCCATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTTTGTCCCAGGACGAGTaGCTAGAGTTTCCTGTACAG +
Preference number: 4 (lower is better)
Translates to: LGLHDFCCLFPASYQEILLSQDE*LEFPVQ
Trigger: CTGTACAGGAAACTCTAGCCACTCGTCCTGGGACAA...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTGTCCCAGGACGAGTaGCTAGAGTTTCCTGTACAG +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLLSQDE*LEFPVQ
Trigger: CTGTACAGGAAACTCTAGCCACTCGTCCTGGGACAA...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCGTCCACTGGCTGCATTaGACTTTGCATTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFVHWLH*TLHFCG
Trigger: ACCACAGAAATGCAAAGTCCAATGCAGCCAGTGGAC...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTCCTGGAAGGCTCGCTTaGTCCACTGGCTGCATTGGA +
Preference number: 4 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFPGRLA*STGCIG
Trigger: TCCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGG...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCATTTTCCCATGGTaGAGGTTCCCTGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: FHLGFMTSVVCSRLLTKKFIFPW*RFPAVT
Trigger: GGTCACTGCAGGGAACCTCCACCATGGGAAAATGAA...TTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp GTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCTTGTGTGTCGGCTTCATTTTCCCATaGTGGAGGTTCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VFLDTSQETYALICTLCVGFIFP*WRFPAV
Trigger: CACTGCAGGGAACCTCCACCATGGGAAAATGAAGCC...GACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTGAGTCTGTTTGTATGTaGTTGGTCACAGAAATGACA +
Preference number: 4 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCESVCM*LVTEMT
Trigger: TGTCATTTCTGTGACCAACCACATACAAACAGACTC...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp GAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGACTGGGAAGTTGGAATaGGATGAATGTAAACCTACT +
Preference number: 4 (lower is better)
Translates to: ECVCCVFTLVLGLSLGLLTGKLE*DECKPT
Trigger: AGTAGGTTTACATTCATCTCATTCCAACTTCCCAGT...CAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTTTGGCTGCCCCGTTTTaGAGTTACCCAAAGATTATT +
Preference number: 4 (lower is better)
Translates to: LCIYVSAGAFLGTPELGSLAAPF*SYPKII
Trigger: AATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAA...ACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAATCATCCTTCTGTTCCTaGCATTGCCTCATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQESSFCS*HCLMGL
Trigger: CAAACCCATGAGGCAATGTCAGGAACAGAAGGATGA...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCCGCTTTTTATTCTaGGGAAACCTCTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: FIRQRERENQQSEAAEKGTRFLF*GNLSCI
Trigger: AATGCAAGAGAGGTTTCCGCAGAATAAAAAGCGGGT...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCGCTTGGTCCACTGGCTaGATTGGACTTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFAWSTG*IGLCIS
Trigger: AGAAATGCAAAGTCCAATGCAGCCAGTGGACCAAGC...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACACGGCCTTCGGGGCTTaGCTGAGGCTTCTCTTCACC +
Preference number: 4 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYTAFGA*LRLLFT
Trigger: GGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGT...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp GTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTTCAACGGCGAAATTaGTATTTAGAAGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VECVCCVFTLVLGLSLGLLQRRN*YLEVGS
Trigger: GCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG...GAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTCCTCATGGGTTTGGCTaGCCCGTTTTGAAGTTACCC +
Preference number: 4 (lower is better)
Translates to: LHDFCCLFPASYQEILVLPHGFG*PVLKLP
Trigger: GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGG...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp TCCCTTTTTGGTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACGAGAGTGGGTGGGCGTaGAGAGCAATAACACAATGG +
Preference number: 4 (lower is better)
Translates to: SLFGVFRHFSGNVRIDLHESGWA*RAITQW
Trigger: CCATTGTGTTATTGCTCTGCACGCCCACCCACTCTC...GTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACACCAAAAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGTTTGAATGTGGCGTGTaGGATCTCTGGCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: HDFCCLFPASYQEILVLLFECGV*DLWRVI
Trigger: GATGACCCGCCAGAGATCCCACACGCCACATTCAAA...CAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTAGGCTTCTCTTCACCTaGAAGGCTCGCTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFRLLFT*KARLVH
Trigger: GTGGACCAAGCGAGCCTTCCAGGTGAAGAGAAGCCT...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379954.5
CDS-3UTR CCA 90 bp TTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCAGGCTTCTCTTCACCTaGAAACTGACTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LYRVECVCCVFTLVLGLSRLLFT*KLTGLH
Trigger: ATGGAGACCAGTCAGTTTCCAGGTGAAGAGAAGCCT...GGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTACCCTATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCATCTTGCACCAGATATaGAACCAGGACTTCCACCGA +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFILHQI*NQDFHR
Trigger: TCGGTGGAAGTCCTGGTTCCATATCTGGTGCAAGAT...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTCCACATCAGCAGGTATaGATCCATCTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVPHQQV*IHLPDP
Trigger: AGGGTCAGGAAGATGGATTCATACCTGCTGATGTGG...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGTAGGCCATGGCTTTaGATGTGGCGTGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: TSVVCSRLLTKKFLFFWFCRPWL*MWRVGS
Trigger: AGATCCCACACGCCACATTCAAAGCCATGGCCTACA...AAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTGCAGCCCAGAGTTCTTaGAGGATGTTTATTAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIAAQSS*RMFIRQ
Trigger: TTGCCTAATAAACATCCTTCAAGAACTCTGGGCTGC...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp TCCCTTTTTGGTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACGAGCCAAGGGTAAAATaGTTTCTGGGTAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLFGVFRHFSGNVRIDLHEPRVK*FLGSSP
Trigger: TGGGCTGCTACCCAGAAATCATTTTACCCTTGGCTC...GTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACACCAAAAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp CCTGTAAACATCAAATTAGTGCAGGCCAAATTCAGGGTATCATTCATAGCAATCGACTCAACTGATTCGTaGGGGGAGATCTTGCACCAG +
Preference number: 4 (lower is better)
Translates to: PVNIKLVQAKFRVSFIAIDSTDS*GEILHQ
Trigger: CTGGTGCAAGATCTCCCCTCACGAATCAGTTGAGTC...GATTGCTATGAATGATACCCTGAATTTGGCCTGCACTAATTTGATGTTTACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTGCGGAAACCTCTCTTaGATTCACAGTTCAACATGG +
Preference number: 4 (lower is better)
Translates to: GFMTSVVCSRLLTKKFLFCGNLS*IHSSTW
Trigger: CCATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCA...GAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAATGCGGAAACCTCTCTTaGATTCACAGTTCAACATGG +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQECGNLS*IHSSTW
Trigger: CCATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCA...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTCACCTTGTCTTCCCGTaGGTCATTTTGCAGACGCTC +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFHLVFP*VILQTL
Trigger: GAGCGTCTGCAAAATGACCCACGGGAAGACAAGGTG...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CCA 90 bp TCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTATATGGACGTCTCCATaGTTGCAGCCATTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLGLHDFCCLFPASYQEIIWTSP*LQPFLS
Trigger: AGACAGAAATGGCTGCAACCATGGAGACGTCCATAT...AATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACCTTGTGTGTCATTGCCTCATGGGTTTaGCTGCCCCGTTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: VFLDTSQETYALICTLCVIASWV*LPRFEV
Trigger: AACTTCAAAACGGGGCAGCCAAACCCATGAGGCAAT...GACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp ACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTCCTGACATTGCCTCATaGGTTTGGCTGCCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: TSVVCSRLLTKKFLFFWFPDIAS*VWLPRF
Trigger: AAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGG...AAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTGCTCTCTTTAAGTATTaGGCTGGCGTGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LHDFCCLFPASYQEILVLALFKY*AGVFSQ
Trigger: CTGGCTGAACACGCCAGCCCAATACTTAAAGAGAGC...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
3UTR CAA 72 bp CAACAGCACCTGGGAATTGTTAGACACACAAAACATTaGGCTCTATTCCAGACCAACAACTCAGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: QQHLGIVRHTKH*ALFQTNNSETL
Trigger: CAGAGTCTCTGAGTTGTTGGTCTGGAATAGAGCCAAATGTTTTGTGTGTCTAACAATTCCCAGGTGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTTTCTGTTCTTCAGGTTaGGGTGTCACTTGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: LGLHDFCCLFPASYQEILFCSSG*GVTCFV
Trigger: AACGAAACAAGTGACACCTCAACCTGAAGAACAGAA...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACTCAGGAGGAGGACGCTaGTCAGCAGGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYSGGGR*SAGKHS
Trigger: GCTGTGTTTTCCTGCTGATCAGCGTCCTCCTCCTGA...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAATTGGCTGCCCCGTTTTaGAGTTACCCAAAGATTATT +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQELAAPF*SYPKII
Trigger: AATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAA...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAATCCTTGCATAAACATTaGATGTACGGATCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VCVLCIYVSAGAFLGTPESLHKH*MYGSLF
Trigger: AAAAAGGGATCCGTACATTCAATGTTTATGCAAGGA...TTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAACCCGCTTTTTATTCTaGGGAAACCTCTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQETRFLF*GNLSCI
Trigger: AATGCAAGAGAGGTTTCCGCAGAATAAAAAGCGGGT...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGACCCGCTTTTTATTCTaGGGAAACCTCTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLTRFLF*GNLSCI
Trigger: AATGCAAGAGAGGTTTCCGCAGAATAAAAAGCGGGT...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTTATACTACATATAGGGTGGAGAGAGTTCCATACCATTCATGCTTTAATGAAAGACAAGGTTGCCACTaGCCCGTGTCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: LYTTYRVERVPYHSCFNERQGCH*PVSCDV
Trigger: CACATCACAGGACACGGGGCAGTGGCAACCTTGTCT...TTCATTAAAGCATGAATGGTATGGAACTCTCTCCACCCTATATGTAGTATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATGGGACTTTCTTTCCTTCCTTaGATAAACATTGAATGTACG +
Preference number: 4 (lower is better)
Translates to: LQRRNCYLEVGSARSLMGLSFLP*INIECT
Trigger: CGTACATTCAATGTTTATGCAAGGAAGGAAAGAAAG...TCCCATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTATTCACAGTTCAACATaGTTCCTTCCTTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGLHDFCCLFPASYQEILIHSST*FLPCRP
Trigger: TGGCCTACAAGGAAGGAACCATGTTGAACTGTGAAT...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGATTCACAGTTCAACATaGTTCCTTCCTTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLIHSST*FLPCRP
Trigger: TGGCCTACAAGGAAGGAACCATGTTGAACTGTGAAT...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGCCGGCCACTGCTACCTaGTACTCTGTTGTAAATATG +
Preference number: 4 (lower is better)
Translates to: MTSVVCSRLLTKKFLFFWPATAT*YSVVNM
Trigger: CATATTTACAACAGAGTACCAGGTAGCAGTGGCCGG...CCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTACAGAGCATATAGAGTaGCCCGCTTTTTATTCTGCG +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVTEHIE*PAFYSA
Trigger: CGCAGAATAAAAAGCGGGTCACTCTATATGCTCTGT...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTTTCACTTGGGCTTCATaGCTTCTGTTGTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFFTWAS*LLLSVP
Trigger: GGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAA...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAGTTAGCTTAGAGGATTaGGCCAAGGGTAAAATGATT +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEVSLED*AKGKMI
Trigger: AATCATTTTACCCTTGGCTCAATCCTCTAAGCTAAC...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGGGAGAGTGCACAGATaGGTCTGTTTGTATGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFGRVHR*VCLYVV
Trigger: AACCACATACAAACAGACTCATCTGTGCACTCTCCC...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGCTTGGTCCACTGGCTaGATTGGACTTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFAWSTG*IGLCIS
Trigger: AGAAATGCAAAGTCCAATGCAGCCAGTGGACCAAGC...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGTCCACTGGCTGCATTaGACTTTGCATTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFVHWLH*TLHFCG
Trigger: ACCACAGAAATGCAAAGTCCAATGCAGCCAGTGGAC...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACCACCTTGTCTTCCCGTaGGTCATTTTGCAGACGCTC +
Preference number: 4 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYHLVFP*VILQTL
Trigger: GAGCGTCTGCAAAATGACCCACGGGAAGACAAGGTG...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTATATGGACGTCTCCATaGTTGCAGCCATTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: DFCCLFPASYQEILVLLVIWTSP*LQPFLS
Trigger: AGACAGAAATGGCTGCAACCATGGAGACGTCCATAT...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTCCGGCCACTGCTACCTaGTACTCTGTTGTAAATATG +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFPATAT*YSVVNM
Trigger: CATATTTACAACAGAGTACCAGGTAGCAGTGGCCGG...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGATGTTCAAGGACTGCTaGTATGCTCATCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLMFKDC*YAHLVF
Trigger: AAAGACAAGATGAGCATACCAGCAGTCCTTGAACAT...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp TCCCTTTTTGGTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACAGCAGCAACAGCACCTaGGAATTGTTAGACACACAA +
Preference number: 4 (lower is better)
Translates to: SLFGVFRHFSGNVRIDLHSSNST*ELLDTQ
Trigger: TTGTGTGTCTAACAATTCCCAGGTGCTGTTGCTGCT...GTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACACCAAAAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGCTCAAAGTGTGTTCCTaGAATAGTAGCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HDFCCLFPASYQEILVLLLKVCS*NSSSSN
Trigger: GTTGCTGCTGCTACTATTCCAGGAACACACTTTGAG...CAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp ATCTTGCACCAGATATGGAACCAGGACTTCCACCGAAATCTTAGCTCTGGAAGTAGAGCAATAACACAATaGTTCTCAAAGTGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ILHQIWNQDFHRNLSSGSRAITQ*FSKCVP
Trigger: AGGAACACACTTTGAGAACCATTGTGTTATTGCTCT...ACTTCCAGAGCTAAGATTTCGGTGGAAGTCCTGGTTCCATATCTGGTGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATACTACATATAGGGTaGAGAGAGTTCCATACCATT +
Preference number: 4 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEILHIG*REFHTI
Trigger: AATGGTATGGAACTCTCTCCACCCTATATGTAGTAT...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR TCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTTTCTGTTCTTCAGGTTaGGGTGTCACTTGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFFCSSG*GVTCFV
Trigger: AACGAAACAAGTGACACCTCAACCTGAAGAACAGAA...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR GCA 90 bp GACAATGTCCAGTTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGATAATGTTCAAGGACTaGTGGTATGCTCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: DNVQLYRVECVCCVFTLVIMFKD*WYAHLV
Trigger: GACAAGATGAGCATACCAGCAGTCCTTGAACATTAT...CACTAACGTAAATACACAACACACACACTCTACCCTATACAACTGGACATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp TCCCTTTTTGGTGTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTTGCACGACACACAAAACATTTaGCTCTATTCCAGACCAACA +
Preference number: 4 (lower is better)
Translates to: SLFGVFRHFSGNVRIDLHDTQNI*LYSRPT
Trigger: TGTTGGTCTGGAATAGAGCCAAATGTTTTGTGTGTC...GTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAACACCAAAAAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTGTTAGCTTAGAGGATTaGGCCAAGGGTAAAATGATT +
Preference number: 4 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFVSLED*AKGKMI
Trigger: AATCATTTTACCCTTGGCTCAATCCTCTAAGCTAAC...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGATACTACATATAGGGTaGAGAGAGTTCCATACCATT +
Preference number: 4 (lower is better)
Translates to: MTSVVCSRLLTKKFLFFWILHIG*REFHTI
Trigger: AATGGTATGGAACTCTCTCCACCCTATATGTAGTAT...CCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
3UTR CAA 72 bp GTTTTTAGACACTTCTCAGGAAACGTACGCATTGATTaGCACCTTGTGTGTCCACCTGTAAACATCAAATTA +
Preference number: 4 (lower is better)
Translates to: VFRHFSGNVRID*HLVCPPVNIKL
Trigger: TAATTTGATGTTTACAGGTGGACACACAAGGTGCAAATCAATGCGTACGTTTCCTGAGAAGTGTCTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR GCA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACCTTCAACGGCGAAATTaGTATTTAGAAGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYLQRRN*YLEVGS
Trigger: GCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CCA 90 bp ACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTTCAGAAGTGAAAACTaGCTGATAGTTTCCCAAATG +
Preference number: 4 (lower is better)
Translates to: TSVVCSRLLTKKFLFFWFFRSEN*LIVSQM
Trigger: CATTTGGGAAACTATCAGCCAGTTTTCACTTCTGAA...AAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CCA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGTATCACATAGCTTCTaGAAAATTCCACCATACACT +
Preference number: 4 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFVSHSF*KIPPYT
Trigger: AGTGTATGGTGGAATTTTCCAGAAGCTATGTGATAC...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR TCA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACACTGGGAAGTTGGAATaGGATGAATGTAAACCTACT +
Preference number: 4 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYTGKLE*DECKPT
Trigger: AGTAGGTTTACATTCATCTCATTCCAACTTCCCAGT...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS CCA 90 bp GGCCCAGTTGCCGTCAGCCTCTTTTTGGCATCGCGCCGGAGGATGTaGGATGGGAAGATCGGTCCGCCTGGGCTGTCACCCTTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: GPVAVSLFLASRRRM*DGKIGPPGLSPLWV
Trigger: GACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGCAACTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS GCA 90 bp CTGACCCTTGGGACCAGCCGGGGCAGTGAAGCGGAGGTCTTTCTCTaGAGAAGGCCCAGTTGCCGTCAGCCTCTTTTTGGCATCGCGCCG +
Preference number: 5 (lower is better)
Translates to: LTLGTSRGSEAEVFL*RRPSCRQPLFGIAP
Trigger: CGGCGCGATGCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCGCTTCACTGCCCCGGCTGGTCCCAAGGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS GCA 90 bp AGCCGGGGCAGTGAAGCGGAGGTCTTTCTCTGCAGAAGGCCCAGTTaGCGTCAGCCTCTTTTTGGCATCGCGCCGGAGGATGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: SRGSEAEVFLCRRPS*RQPLFGIAPEDVGW
Trigger: CCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCGCTTCACTGCCCCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS CCA 90 bp AGTTGCCGTCAGCCTCTTTTTGGCATCGCGCCGGAGGATGTGGGATaGGAAGATCGGTCCGCCTGGGCTGTCACCCTTGTGGGTCCATCC +
Preference number: 5 (lower is better)
Translates to: SCRQPLFGIAPEDVG*EDRSAWAVTLVGPS
Trigger: GGATGGACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS CCA 90 bp TTTGGCATCGCGCCGGAGGATGTGGGATGGGAAGATCGGTCCGCCTaGGCTGTCACCCTTGTGGGTCCATCCAGTCTCTATCGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: FGIAPEDVGWEDRSA*AVTLVGPSSLYRSQ
Trigger: CTGACTCCGATAGAGACTGGATGGACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379959.8
ENST00000644262.1
CDS CCA 90 bp TCCTTCCTTGTAGGCCATGGCTTTGAATGTGGCGTGTGGGATCTCTaGCGGGTCATCGTCACAGAGCTCTGCCTGGCAGCCAGGCACCAT +
Preference number: 5 (lower is better)
Translates to: SFLVGHGFECGVWDL*RVIVTELCLAARHH
Trigger: ATGGTGCCTGGCTGCCAGGCAGAGCTCTGTGACGATGACCCGCCAGAGATCCCACACGCCACATTCAAAGCCATGGCCTACAAGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GGTAGCGCTCGCTCTCTGATGGGACTGAGCTGGCATAGAGACAAGGTTGCCACTACCTGGAAGGCTCGCTaGGTCCACTGGCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: GSARSLMGLSWHRDKVATTWKAR*VHWLHW
Trigger: CCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGGT...AGTGGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAGAGAGCGAGCGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GGTAGCGCTCGCTCTCTGATGGGACTGAGCTGGCATAGAGACAAGGTTGCCACTCCTGGGCTGTCACCCTaGTGGGTCCATCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: GSARSLMGLSWHRDKVATPGLSP*WVHPVS
Trigger: AGAGACTGGATGGACCCACAAGGGTGACAGCCCAGG...AGTGGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAGAGAGCGAGCGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS CCA 90 bp CAACATGGTTCCTTCCTTGTAGGCCATGGCTTTGAATGTGGCGTGTaGGATCTCTGGCGGGTCATCGTCACAGAGCTCTGCCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: QHGSFLVGHGFECGV*DLWRVIVTELCLAA
Trigger: GGCTGCCAGGCAGAGCTCTGTGACGATGACCCGCCAGAGATCCCACACGCCACATTCAAAGCCATGGCCTACAAGGAAGGAACCATGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS CCA 90 bp TCACCTGTGCATATGAGCTGGGGCTGGGTCCACCTTGTCTTCCCGTaGGTCATTTTGCAGACGCTCTCAGCAGGACCTCTGTGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPVHMSWGWVHLVFP*VILQTLSAGPLCRA
Trigger: GGCTCTACACAGAGGTCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGAAGACAAGGTGGACCCAGCCCCAGCTCATATGCACAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CAA 90 bp AGCTTCCAAAACGCAGGCAAGCACAACGGATGTCTCCTGGGCGACCATTTAGCAGACGGCCTTCGGGGCTaGCCTGAGGCTTCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SFQNAGKHNGCLLGDHLADGLRG*PEASLH
Trigger: GTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTC...TGCTAAATGGTCGCCCAGGAGACATCCGTTGTGCTTGCCTGCGTTTTGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTCTGATGGGAGCCGTCAGCCTCTTTTaGGCATCGCGCCGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LQRRNCYLEVGSARSLMGAVSLF*ASRRRM
Trigger: CATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGC...TCCCATCAGAGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS TCA 90 bp GGGCACTGGGAAGCGGTGAAGTGGTCTCAGCAGAGCAGACGAGGCTaGATTCTAACTCTGACCCTAGCTGTCCCCAAAACTCTGAGCAAT +
Preference number: 5 (lower is better)
Translates to: GHWEAVKWSQQSRRG*ILTLTLAVPKTLSN
Trigger: ATTGCTCAGAGTTTTGGGGACAGCTAGGGTCAGAGTTAGAATTCAGCCTCGTCTGCTCTGCTGAGACCACTTCACCGCTTCCCAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS-3UTR CAA 90 bp TTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCAAAGATTATTCTGCCGACGGCCTTCGGGGCTaGCCTGAGGCTTCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: LPHGFGCPVLKLPKDYSADGLRG*PEASLH
Trigger: GTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTC...GGCAGAATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCAAAGATTATTCTGCCGGCATAGAGACAAGGTaGCCACTGCCCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LPHGFGCPVLKLPKDYSAGIETR*PLPRVL
Trigger: CAGGACACGGGGCAGTGGCAACCTTGTCTCTATGCC...GGCAGAATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GGTAGCGCTCGCTCTCTGATGGGACTGAGCTGGCATAGAGACAAGGTTGCCACTAACGTACGCATTGATTaGCACCTTGTGTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: GSARSLMGLSWHRDKVATNVRID*HLVCPP
Trigger: AGGTGGACACACAAGGTGCAAATCAATGCGTACGTT...AGTGGCAACCTTGTCTCTATGCCAGCTCAGTCCCATCAGAGAGCGAGCGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS TCA 90 bp TGCATTCACAGTTCAACATGGTTCCTTCCTTGTAGGCCATGGCTTTaGATGTGGCGTGTGGGATCTCTGGCGGGTCATCGTCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: CIHSSTWFLPCRPWL*MWRVGSLAGHRHRA
Trigger: AGCTCTGTGACGATGACCCGCCAGAGATCCCACACGCCACATTCAAAGCCATGGCCTACAAGGAAGGAACCATGTTGAACTGTGAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGGCCGTCAGCCTCTTTTaGGCATCGCGCCGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLAVSLF*ASRRRM
Trigger: CATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGC...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCGCTTGTGCATTGACATaGGTTGTCCCAGGACGAGTG +
Preference number: 5 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPACALT*VVPGRV
Trigger: CACTCGTCCTGGGACAACCAATGTCAATGCACAAGC...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTGGTCCACTGGCTGCATaGGACTTTGCATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSGPLAA*DFAFLW
Trigger: CCACAGAAATGCAAAGTCCAATGCAGCCAGTGGACC...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCAGAGTTCTAGTGGTTTaGCCCTTCCTCTTCAACGGC +
Preference number: 5 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPRVLVV*PFLFNG
Trigger: GCCGTTGAAGAGGAAGGGCAAAACCACTAGAACTCT...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTGCAGAAGGCCCAGTaGCCGTCAGCCTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: GLHDFCCLFPASYQEILVLQKAQ*PSASFW
Trigger: CCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAG...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp AACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGACAATGTCTGCGGAAACCTCTCTaGCATTCACAGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: NGRISSQKRLRKEPRRQCLRKPL*HSQFNM
Trigger: CATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCAG...ACATTGTCTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp ATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAACTGGGAAGTTGGAATGGCAGAGCTTGTGCATaGACATTGGTTGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: IYVSAGAFLGTPELGSWNGRACA*TLVVPG
Trigger: TCCTGGGACAACCAATGTCAATGCACAAGCTCTGCC...ATTCCAACTTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAAGTGTCACTTGTTTCGTaGTGTTCCGAGTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LLGNVNGRISSQKRLRKEVSLVS*CSEWQS
Trigger: GCTCTGCCACTCGGAACACAACGAAACAAGTGACAC...TTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp ACAATGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGGTCCACTGGCTGCATaGGACTTTGCATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: TMVLKVCSWNSSSSNSTWGPLAA*DFAFLW
Trigger: CCACAGAAATGCAAAGTCCAATGCAGCCAGTGGACC...CCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp ATGCGCTCTTTTCCGTGGTTACGTTCTACCAGTGTGACCTCCATCCCTTCTCCCTATCGGAGTCAGGAGTaGCTCTCTTTAAGTATTGGG +
Preference number: 5 (lower is better)
Translates to: MRSFPWLRSTSVTSIPSPYRSQE*LSLSIG
Trigger: CCCAATACTTAAAGAGAGCAACTCCTGACTCCGATA...GGGAGAAGGGATGGAGGTCACACTGGTAGAACGTAACCACGGAAAAGAGCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCCAGGAAACGTACGCATaGATTTGCACCTTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPQETYA*ICTLCV
Trigger: GACACACAAGGTGCAAATCAATGCGTACGTTTCCTG...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp CAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAACCACGCAGAGACACACAAAACATTaGGCTCTATTCCAGACCAAC +
Preference number: 5 (lower is better)
Translates to: QRERENQQSEAAEKGTTQRHTKH*ALFQTN
Trigger: GTTGGTCTGGAATAGAGCCAAATGTTTTGTGTGTCT...CTGCGTGGTTCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp GTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAATCCGAGTGGCAGAGCTaGTGCATTGACATTGGTTGT +
Preference number: 5 (lower is better)
Translates to: VCVLCIYVSAGAFLGTPESEWQS*CIDIGC
Trigger: ACAACCAATGTCAATGCACAAGCTCTGCCACTCGGA...TTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCTCCGAGTGGCAGAGCTaGTGCATTGACATTGGTTGT +
Preference number: 5 (lower is better)
Translates to: VECVCCVFTLVLGLSLGLSEWQS*CIDIGC
Trigger: ACAACCAATGTCAATGCACAAGCTCTGCCACTCGGA...GAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCGTGTCACTTGTTTCGTaGTGTTCCGAGTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFVSLVS*CSEWQS
Trigger: GCTCTGCCACTCGGAACACAACGAAACAAGTGACAC...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTCCTGACATTGCCTCATGGGTTTGGCTGCCCCGTTTTGAAGTTACCCTGGCTGCATTGGACTTaGCATTTCTGTGGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLFLTLPHGFGCPVLKLPWLHWT*HFCGFP
Trigger: AGGAAAACCACAGAAATGCAAAGTCCAATGCAGCCA...GGGTAACTTCAAAACGGGGCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTGACGGCCTTCGGGGCTaGCCTGAGGCTTCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFDGLRG*PEASLH
Trigger: GTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTC...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GGTTTTGCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTTGGACGTCTCCATGGTaGCAGCCATTTCTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: GFALPLQRRNCYLEVGSAWTSPW*QPFLSV
Trigger: TACAGACAGAAATGGCTGCAACCATGGAGACGTCCA...AGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGCCTGGGCTGTCACCCTaGTGGGTCCATCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: HDFCCLFPASYQEILVLLPGLSP*WVHPVS
Trigger: AGAGACTGGATGGACCCACAAGGGTGACAGCCCAGG...CAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTGGCATAGAGACAAGGTaGCCACTGCCCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LHDFCCLFPASYQEILVLGIETR*PLPRVL
Trigger: CAGGACACGGGGCAGTGGCAACCTTGTCTCTATGCC...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCCTTCTGTTCCTGACATaGCCTCATGGGTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: HLGFMTSVVCSRLLTKKFLLFLT*PHGFGC
Trigger: GCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG...GAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS TCA 90 bp GTCCCAGGACGAGTGGCTAGAGTTTCCTGTACAGAGCATATAGAGTaGCCCGCTTTTTATTCTGCGGAAACCTCTCTTGCATTCACAGTT +
Preference number: 5 (lower is better)
Translates to: VPGRVARVSCTEHIE*PAFYSAETSLAFTV
Trigger: AACTGTGAATGCAAGAGAGGTTTCCGCAGAATAAAAAGCGGGTCACTCTATATGCTCTGTACAGGAAACTCTAGCCACTCGTCCTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS-3UTR CAA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTGCTTGTGCATTGACATaGGTTGTCCCAGGACGAGTG +
Preference number: 5 (lower is better)
Translates to: GLHDFCCLFPASYQEILVACALT*VVPGRV
Trigger: CACTCGTCCTGGGACAACCAATGTCAATGCACAAGC...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTGGCAGAGCTTGTGCATaGACATTGGTTGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GLHDFCCLFPASYQEILVGRACA*TLVVPG
Trigger: TCCTGGGACAACCAATGTCAATGCACAAGCTCTGCC...AACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATAGGTTGAGGTGTCACTaGTTTCGTTGTGTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: WFSKCVPGIVAAATAPGNRLRCH*FRCVPS
Trigger: ACTCGGAACACAACGAAACAAGTGACACCTCAACCT...ATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGGGTCCACTGGCTGCATaGGACTTTGCATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLGPLAA*DFAFLW
Trigger: CCACAGAAATGCAAAGTCCAATGCAGCCAGTGGACC...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTACCTGGAAGGCTCGCTaGGTCCACTGGCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFTWKAR*VHWLHW
Trigger: CCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGGT...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTGTGCTGGGGCTTTCCTaGGGACTCCTGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LHDFCCLFPASYQEILVLVLGLS*GLLNWE
Trigger: TTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCAC...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GACAATGTCCAGTTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGGTGCTGGGGCTTTCCTaGGGACTCCTGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: DNVQLYRVECVCCVFTLVVLGLS*GLLNWE
Trigger: TTCCCAGTTCAGGAGTCCCAAGGAAAGCCCCAGCAC...CACTAACGTAAATACACAACACACACACTCTACCCTATACAACTGGACATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTTATTAGGCAACGTGAACGGGAGAATCAGCAGTCAGAAGCGGCTGAGAAAGGAGCAGACAATGTCCAGTaGTATAGGGTAGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: FIRQRERENQQSEAAEKGADNVQ*YRVECV
Trigger: CACACACTCTACCCTATACAACTGGACATTGTCTGC...TCCTTTCTCAGCCGCTTCTGACTGCTGATTCTCCCGTTCACGTTGCCTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCTTGGGACTCCTGAAGCAGACAATGTCCAGTaGTATAGGGTAGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VCVLCIYVSAGAFLGTPEADNVQ*YRVECV
Trigger: CACACACTCTACCCTATACAACTGGACATTGTCTGC...TTCAGGAGTCCCAAGGAAAGCCCCAGCACTAACGTAAATACACAACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTTTTGGCTGCCCCGTTTaGAAGTTACCCAAAGATTAT +
Preference number: 5 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSFGCPV*KLPKDY
Trigger: ATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAA...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTTATACTACATATAGGGTGGAGAGAGTTCCATACCATTCATGCTTTAATGAAGCCGTCAGCCTCTTTTaGGCATCGCGCCGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LYTTYRVERVPYHSCFNEAVSLF*ASRRRM
Trigger: CATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGC...TTCATTAAAGCATGAATGGTATGGAACTCTCTCCACCCTATATGTAGTATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTCTGCAGAAGGCCCAGTaGCCGTCAGCCTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFLQKAQ*PSASFW
Trigger: CCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAG...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAATCCGAGTGGCAGAGCTaGTGCATTGACATTGGTTGT +
Preference number: 5 (lower is better)
Translates to: ISLGLHDFCCLFPASYQESEWQS*CIDIGC
Trigger: ACAACCAATGTCAATGCACAAGCTCTGCCACTCGGA...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TGGTTCTCAAAGTGTGTTCCTGGAATAGTAGCAGCAGCAACAGCACCTGGGAATTGGCTGCATTGGACTTaGCATTTCTGTGGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: WFSKCVPGIVAAATAPGNWLHWT*HFCGFP
Trigger: AGGAAAACCACAGAAATGCAAAGTCCAATGCAGCCA...ATTCCCAGGTGCTGTTGCTGCTGCTACTATTCCAGGAACACACTTTGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTCCCGTGGGTCATTTaGCAGACGCTCTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: DFCCLFPASYQEILVLLVFPWVI*QTLSAG
Trigger: TCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGAA...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS-3UTR CAA 90 bp GACAATGTCCAGTTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGTTCCCGTGGGTCATTTaGCAGACGCTCTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: DNVQLYRVECVCCVFTLVFPWVI*QTLSAG
Trigger: TCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGAA...CACTAACGTAAATACACAACACACACACTCTACCCTATACAACTGGACATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS GCA 90 bp AGAGCATATAGAGTGACCCGCTTTTTATTCTGCGGAAACCTCTCTTaGATTCACAGTTCAACATGGTTCCTTCCTTGTAGGCCATGGCTT +
Preference number: 5 (lower is better)
Translates to: RAYRVTRFLFCGNLS*IHSSTWFLPCRPWL
Trigger: AAGCCATGGCCTACAAGGAAGGAACCATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCAGAATAAAAAGCGGGTCACTCTATATGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS-3UTR CAA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAACTGCGGAAACCTCTCTaGCATTCACAGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: ISLGLHDFCCLFPASYQELRKPL*HSQFNM
Trigger: CATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCAG...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGAGGTTGAGGTGTCACTaGTTTCGTTGTGTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: LGFMTSVVCSRLLTKKFLRLRCH*FRCVPS
Trigger: ACTCGGAACACAACGAAACAAGTGACACCTCAACCT...CAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACACCTGGAAGGCTCGCTaGGTCCACTGGCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYTWKAR*VHWLHW
Trigger: CCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGGT...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GCCCTTCCTCTTCAACGGCGAAATTGCTATTTAGAAGTGGGTAGCGCTCGCTCTTTCCACCATACACTTTaGAGAGAAGGACAGATAAAT +
Preference number: 5 (lower is better)
Translates to: ALPLQRRNCYLEVGSARSFHHTL*REGQIN
Trigger: ATTTATCTGTCCTTCTCTCAAAAGTGTATGGTGGAA...AGAGCGAGCGCTACCCACTTCTAAATAGCAATTTCGCCGTTGAAGAGGAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGCTTGTGCATTGACATaGGTTGTCCCAGGACGAGTG +
Preference number: 5 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFACALT*VVPGRV
Trigger: CACTCGTCCTGGGACAACCAATGTCAATGCACAAGC...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTGTGTCACTTGTTTCGTaGTGTTCCGAGTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFVSLVS*CSEWQS
Trigger: GCTCTGCCACTCGGAACACAACGAAACAAGTGACAC...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTGGACGTCTCCATGGTaGCAGCCATTTCTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: DFCCLFPASYQEILVLLVWTSPW*QPFLSV
Trigger: TACAGACAGAAATGGCTGCAACCATGGAGACGTCCA...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTAGAGTTCTAGTGGTTTaGCCCTTCCTCTTCAACGGC +
Preference number: 5 (lower is better)
Translates to: LHDFCCLFPASYQEILVLRVLVV*PFLFNG
Trigger: GCCGTTGAAGAGGAAGGGCAAAACCACTAGAACTCT...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CCTGTAAACATCAAATTAGTGCAGGCCAAATTCAGGGTATCATTCATAGCAATCCTTCTGTTCCTGACATaGCCTCATGGGTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PVNIKLVQAKFRVSFIAILLFLT*PHGFGC
Trigger: GCAGCCAAACCCATGAGGCAATGTCAGGAACAGAAG...GATTGCTATGAATGATACCCTGAATTTGGCCTGCACTAATTTGATGTTTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTCTGCGGAAACCTCTCTaGCATTCACAGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: LHDFCCLFPASYQEILVLLRKPL*HSQFNM
Trigger: CATGTTGAACTGTGAATGCAAGAGAGGTTTCCGCAG...AAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTTGGACGTCTCCATGGTaGCAGCCATTTCTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: LLLSVPGFLPRNSCSFGFWTSPW*QPFLSV
Trigger: TACAGACAGAAATGGCTGCAACCATGGAGACGTCCA...AAAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp ATTTCACTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAATTTGGCTGCCCCGTTTaGAAGTTACCCAAAGATTAT +
Preference number: 5 (lower is better)
Translates to: ISLGLHDFCCLFPASYQEFGCPV*KLPKDY
Trigger: ATAATCTTTGGGTAACTTCAAAACGGGGCAGCCAAA...TTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp CTTGGGCTTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTCGCACAGGTAAAACTTaGCTAAGTATGATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGLHDFCCLFPASYQEILRTGKT*LSMILC
Trigger: GCAGAGAATCATACTTAGCAAAGTTTTACCTGTGCG...AAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAAGCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTGTATAGGGTAGAGTGTGTGTGTTGTGTATTTACGTTAGTGCTGGGGCTTTCCCGCACAGGTAAAACTTaGCTAAGTATGATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LYRVECVCCVFTLVLGLSRTGKT*LSMILC
Trigger: GCAGAGAATCATACTTAGCAAAGTTTTACCTGTGCG...GGAAAGCCCCAGCACTAACGTAAATACACAACACACACACTCTACCCTATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GAATGTAAACCTACTTTTCTTTATACTACATATAGGGTGGAGAGAGTTCCATACGGCAGAGCTTGTGCATaGACATTGGTTGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ECKPTFLYTTYRVERVPYGRACA*TLVVPG
Trigger: TCCTGGGACAACCAATGTCAATGCACAAGCTCTGCC...GTATGGAACTCTCTCCACCCTATATGTAGTATAAAGAAAAGTAGGTTTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTAGGTTGAGGTGTCACTaGTTTCGTTGTGTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFRLRCH*FRCVPS
Trigger: ACTCGGAACACAACGAAACAAGTGACACCTCAACCT...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp ACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTTTGGCTGCATTGGACTTaGCATTTCTGTGGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: TSVVCSRLLTKKFLFFWFWLHWT*HFCGFP
Trigger: AGGAAAACCACAGAAATGCAAAGTCCAATGCAGCCA...AAACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp GACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTTGGTTGGTAGAGTGTGTGTGTaGTGTATTTACGTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: DFCCLFPASYQEILVLLVGRVCV*CIYVSA
Trigger: AGCACTAACGTAAATACACAACACACACACTCTACC...AACCAAAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS-3UTR CAA 90 bp TTCATGACTTCTGTTGTCTGTTCCCGGCTTCTTACCAAGAAATTCTTGTTCTTTGGTAGAGTGTGTGTGTaGTGTATTTACGTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: FMTSVVCSRLLTKKFLFFGRVCV*CIYVSA
Trigger: AGCACTAACGTAAATACACAACACACACACTCTACC...AAAGAACAAGAATTTCTTGGTAAGAAGCCGGGAACAGACAACAGAAGTCATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379954.5
ENST00000379959.8
CDS GCA 72 bp GAGGCAGGAATCCTGGTGTGGGCACTTCGCCAGGGATaGCACCCCTCATGGTTCCACAGCAGGGGCACTGGG +
Preference number: 6 (lower is better)
Translates to: EAGILVWALRQG*HPSWFHSRGTG
Trigger: CCCAGTGCCCCTGCTGTGGAACCATGAGGGGTGGCATCCCTGGCGAAGTGCCCACACCAGGATTCCTGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS CCA 72 bp GCCGTCAGCCTCTTTTTGGCATCGCGCCGGAGGATGTaGGATGGGAAGATCGGTCCGCCTGGGCTGTCACCC +
Preference number: 6 (lower is better)
Translates to: AVSLFLASRRRM*DGKIGPPGLSP
Trigger: GGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS GCA 72 bp GGGACCAGCCGGGGCAGTGAAGCGGAGGTCTTTCTCTaGAGAAGGCCCAGTTGCCGTCAGCCTCTTTTTGGC +
Preference number: 6 (lower is better)
Translates to: GTSRGSEAEVFL*RRPSCRQPLFG
Trigger: GCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCGCTTCACTGCCCCGGCTGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS CCA 72 bp CAGCCTCTTTTTGGCATCGCGCCGGAGGATGTGGGATaGGAAGATCGGTCCGCCTGGGCTGTCACCCTTGTG +
Preference number: 6 (lower is better)
Translates to: QPLFGIAPEDVG*EDRSAWAVTLV
Trigger: CACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS CCA 72 bp GCGCCGGAGGATGTGGGATGGGAAGATCGGTCCGCCTaGGCTGTCACCCTTGTGGGTCCATCCAGTCTCTAT +
Preference number: 6 (lower is better)
Translates to: APEDVGWEDRSA*AVTLVGPSSLY
Trigger: ATAGAGACTGGATGGACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379959.8
ENST00000644262.1
CDS CCA 72 bp GGGATGCCACCCCTCATGGTTCCACAGCAGGGGCACTaGGAAGCGGTGAAGTGGTCTCAGCAGAGCAGACGA +
Preference number: 6 (lower is better)
Translates to: GMPPLMVPQQGH*EAVKWSQQSRR
Trigger: TCGTCTGCTCTGCTGAGACCACTTCACCGCTTCCCAGTGCCCCTGCTGTGGAACCATGAGGGGTGGCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS CAA 90 bp CGGAGGTCTTTCTCTGCAGAAGGCCCAGTTGCCGTCAGCCTCTTTTaGGCATCGCGCCGGAGGATGTGGGATGGGAAGATCGGTCCGCCT +
Preference number: 6 (lower is better)
Translates to: RRSFSAEGPVAVSLF*ASRRRMWDGKIGPP
Trigger: AGGCGGACCGATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS GCA 72 bp GCAGGAAGTCTCACTCTCAGGACGGCCTTCGGGGCTTaGCTGAGGCTTCTCTTCACCTGGAAGGCTCGCTTG +
Preference number: 6 (lower is better)
Translates to: AGSLTLRTAFGA*LRLLFTWKARL
Trigger: CAAGCGAGCCTTCCAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTCCTGAGAGTGAGACTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379954.5
CDS CCA 72 bp GTAGGCCATGGCTTTGAATGTGGCGTGTGGGATCTCTaGCGGGTCATCGTCACAGAGCTCTGCCTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: VGHGFECGVWDL*RVIVTELCLAA
Trigger: GGCTGCCAGGCAGAGCTCTGTGACGATGACCCGCCAGAGATCCCACACGCCACATTCAAAGCCATGGCCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS CAA 72 bp GGCAGGAAGTCTCACTCTCAGGACGGCCTTCGGGGCTaGCCTGAGGCTTCTCTTCACCTGGAAGGCTCGCTT +
Preference number: 6 (lower is better)
Translates to: GRKSHSQDGLRG*PEASLHLEGSL
Trigger: AAGCGAGCCTTCCAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTCCTGAGAGTGAGACTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379954.5
CDS CAA 72 bp GGCAGGAAGTCTCACTCTCAGGACGGCCTTCGGGGCTaGCCTGAGGCTTCTCTTCACCTGGGGGAGAGAGTA +
Preference number: 6 (lower is better)
Translates to: GRKSHSQDGLRG*PEASLHLGERV
Trigger: TACTCTCTCCCCCAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTCCTGAGAGTGAGACTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS TCA 72 bp ATCCATCTTCCTGACCCTTGGGACCAGCCGGGGCAGTaGAGCGGAGGTCTTTCTCTGCAGAAGGCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: IHLPDPWDQPGQ*SGGLSLQKAQL
Trigger: CAACTGGGCCTTCTGCAGAGAAAGACCTCCGCTTCACTGCCCCGGCTGGTCCCAAGGGTCAGGAAGATGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS TCA 72 bp CCCTCATGGTTCCACAGCAGGGGCACTGGGAAGCGGTaGAGTGGTCTCAGCAGAGCAGACGAGGCTGAATTC +
Preference number: 6 (lower is better)
Translates to: PSWFHSRGTGKR*SGLSRADEAEF
Trigger: GAATTCAGCCTCGTCTGCTCTGCTGAGACCACTTCACCGCTTCCCAGTGCCCCTGCTGTGGAACCATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS CAA 72 bp TGGGATGGGAAGATCGGTCCGCCTGGGCTGTCACCCTaGTGGGTCCATCCAGTCTCTATCGGAGTCAGGAGT +
Preference number: 6 (lower is better)
Translates to: WDGKIGPPGLSP*WVHPVSIGVRS
Trigger: ACTCCTGACTCCGATAGAGACTGGATGGACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379959.8
ENST00000644262.1
CDS CAA 90 bp CGGAGGATGTGGGATGGGAAGATCGGTCCGCCTGGGCTGTCACCCTaGTGGGTCCATCCAGTCTCTATCGGAGTCAGGAGTTGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: RRMWDGKIGPPGLSP*WVHPVSIGVRSCSL
Trigger: AAGAGAGCAACTCCTGACTCCGATAGAGACTGGATGGACCCACAAGGGTGACAGCCCAGGCGGACCGATCTTCCCATCCCACATCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379959.8
ENST00000644262.1
CDS CAA 90 bp CATATGAGCTGGGGCTGGGTCCACCTTGTCTTCCCGTGGGTCATTTaGCAGACGCTCTCAGCAGGACCTCTGTGTAGAGCCCTGTATCCC +
Preference number: 6 (lower is better)
Translates to: HMSWGWVHLVFPWVI*QTLSAGPLCRALYP
Trigger: GGGATACAGGGCTCTACACAGAGGTCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGAAGACAAGGTGGACCCAGCCCCAGCTCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS GCA 72 bp AGTGAAGCGGAGGTCTTTCTCTGCAGAAGGCCCAGTTaGCGTCAGCCTCTTTTTGGCATCGCGCCGGAGGAT +
Preference number: 6 (lower is better)
Translates to: SEAEVFLCRRPS*RQPLFGIAPED
Trigger: ATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAGAGAAAGACCTCCGCTTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS GCA 72 bp GCAGGAAGTCTCACTCTCAGGACGGCCTTCGGGGCTTaGCTGAGGCTTCTCTTCACCTGTGCATATGAGCTG +
Preference number: 6 (lower is better)
Translates to: AGSLTLRTAFGA*LRLLFTCAYEL
Trigger: CAGCTCATATGCACAGGTGAAGAGAAGCCTCAGGCAAGCCCCGAAGGCCGTCCTGAGAGTGAGACTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256876.10
CDS CCA 72 bp CATATGAGCTGGGGCTGGGTCCACCTTGTCTTCCCGTaGGTCATTTTGCAGACGCTCTCAGCAGGACCTCTG +
Preference number: 6 (lower is better)
Translates to: HMSWGWVHLVFP*VILQTLSAGPL
Trigger: CAGAGGTCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGAAGACAAGGTGGACCCAGCCCCAGCTCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256876.10
ENST00000379959.8
CDS CAA 72 bp TTCTCTGCAGAAGGCCCAGTTGCCGTCAGCCTCTTTTaGGCATCGCGCCGGAGGATGTGGGATGGGAAGATC +
Preference number: 6 (lower is better)
Translates to: FSAEGPVAVSLF*ASRRRMWDGKI
Trigger: GATCTTCCCATCCCACATCCTCCGGCGCGATGCCAAAAAGAGGCTGACGGCAACTGGGCCTTCTGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000644262.1
CDS CCA 72 bp TCCTTCCTTGTAGGCCATGGCTTTGAATGTGGCGTGTaGGATCTCTGGCGGGTCATCGTCACAGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SFLVGHGFECGV*DLWRVIVTELC
Trigger: GCAGAGCTCTGTGACGATGACCCGCCAGAGATCCCACACGCCACATTCAAAGCCATGGCCTACAAGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS CAA 90 bp GCTGTCACCCTTGTGGGTCCATCCAGTCTCTATCGGAGTCAGGAGTaGCTCTCTTTAAGTATTGGGCTGGCGTGTTCAGCCAGGAAACTG +
Preference number: 6 (lower is better)
Translates to: AVTLVGPSSLYRSQE*LSLSIGLACSARKL
Trigger: CAGTTTCCTGGCTGAACACGCCAGCCCAATACTTAAAGAGAGCAACTCCTGACTCCGATAGAGACTGGATGGACCCACAAGGGTGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644262.1
CDS TCA 72 bp AGTTCAACATGGTTCCTTCCTTGTAGGCCATGGCTTTaGATGTGGCGTGTGGGATCTCTGGCGGGTCATCGT +
Preference number: 6 (lower is better)
Translates to: SSTWFLPCRPWL*MWRVGSLAGHR
Trigger: ACGATGACCCGCCAGAGATCCCACACGCCACATTCAAAGCCATGGCCTACAAGGAAGGAACCATGTTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
CDS TCA 72 bp GAAGCGGTGAAGTGGTCTCAGCAGAGCAGACGAGGCTaGATTCTAACTCTGACCCTAGCTGTCCCCAAAACT +
Preference number: 6 (lower is better)
Translates to: EAVKWSQQSRRG*ILTLTLAVPKT
Trigger: AGTTTTGGGGACAGCTAGGGTCAGAGTTAGAATTCAGCCTCGTCTGCTCTGCTGAGACCACTTCACCGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS GCA 72 bp ATACGAATGCCATTGAACCACTGGATGGAGCAGAGATaGACTAAGGGACAGCTGCTTCTGTGCCAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: IRMPLNHWMEQR*TKGQLLLCQAL
Trigger: GAGAGCCTGGCACAGAAGCAGCTGTCCCTTAGTGCATCTCTGCTCCATCCAGTGGTTCAATGGCATTCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649218.1
CDS CAA 72 bp CGTTGTGTTCCGAGTGGCAGAGCTTGTGCATTGACATaGGTTGTCCCAGGACGAGTGGCTAGAGTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: RCVPSGRACALT*VVPGRVARVSC
Trigger: ACAGGAAACTCTAGCCACTCGTCCTGGGACAACCAATGTCAATGCACAAGCTCTGCCACTCGGAACACAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS CCA 72 bp AGGCTTCTCTTCACCTGGAAGGCTCGCTTGGTCCACTaGCTGCATTGGACTTTGCATTTCTGTGGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: RLLFTWKARLVH*LHWTLHFCGFP
Trigger: AGGAAAACCACAGAAATGCAAAGTCCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGGTGAAGAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379954.5
CDS TCA 72 bp TGTTTCGTTGTGTTCCGAGTGGCAGAGCTTGTGCATTaGCATTGGTTGTCCCAGGACGAGTGGCTAGAGTTT +
Preference number: 6 (lower is better)
Translates to: CFVVFRVAELVH*HWLSQDEWLEF
Trigger: AAACTCTAGCCACTCGTCCTGGGACAACCAATGTCAATGCACAAGCTCTGCCACTCGGAACACAACGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS CAA 72 bp TTGTTTCGTTGTGTTCCGAGTGGCAGAGCTTGTGCATaGACATTGGTTGTCCCAGGACGAGTGGCTAGAGTT +
Preference number: 6 (lower is better)
Translates to: LFRCVPSGRACA*TLVVPGRVARV
Trigger: AACTCTAGCCACTCGTCCTGGGACAACCAATGTCAATGCACAAGCTCTGCCACTCGGAACACAACGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS GCA 72 bp TTCTCTTCACCTGGAAGGCTCGCTTGGTCCACTGGCTaGATTGGACTTTGCATTTCTGTGGTTTTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: FSSPGRLAWSTG*IGLCISVVFLS
Trigger: AGAAAGGAAAACCACAGAAATGCAAAGTCCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGGTGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379954.5
CDS CCA 72 bp CTGTATTTGAAAATCTGGAAGGCTCGCTTGGTCCACTaGCTGCATTGGACTTTGCATTTCTGTGGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: LYLKIWKARLVH*LHWTLHFCGFP
Trigger: AGGAAAACCACAGAAATGCAAAGTCCAATGCAGCCAGTGGACCAAGCGAGCCTTCCAGATTTTCAAATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447847.1
CDS CAA 72 bp CTTTCTGTTCTTCAGGTTGAGGTGTCACTTGTTTCGTaGTGTTCCGAGTGGCAGAGCTTGTGCATTGACATT +
Preference number: 6 (lower is better)
Translates to: LSVLQVEVSLVS*CSEWQSLCIDI
Trigger: AATGTCAATGCACAAGCTCTGCCACTCGGAACACAACGAAACAAGTGACACCTCAACCTGAAGAACAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS CAA 72 bp TTTCCTTTCTTTCTGTTCTTCAGGTTGAGGTGTCACTaGTTTCGTTGTGTTCCGAGTGGCAGAGCTTGTGCA +
Preference number: 6 (lower is better)
Translates to: FPFFLFFRLRCH*FRCVPSGRACA
Trigger: TGCACAAGCTCTGCCACTCGGAACACAACGAAACAAGTGACACCTCAACCTGAAGAACAGAAAGAAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1
CDS CAA 90 bp TTCTGTGGTTTTCCTTTCTTTCTGTTCTTCAGGTTGAGGTGTCACTaGTTTCGTTGTGTTCCGAGTGGCAGAGCTTGTGCATTGACATTG +
Preference number: 6 (lower is better)
Translates to: FCGFPFFLFFRLRCH*FRCVPSGRACALTL
Trigger: CAATGTCAATGCACAAGCTCTGCCACTCGGAACACAACGAAACAAGTGACACCTCAACCTGAAGAACAGAAAGAAAGGAAAACCACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256876.10
ENST00000379954.5
ENST00000379959.8
ENST00000447847.1