RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL27RA (Homo sapiens)

Ensembl gene IDs: ENSG00000104998

Ensembl transcript IDs: ENST00000263379.4, ENST00000672064.1

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCAGTGTCTTCATCCATCAAGAGGGCTAATCCAGGACTGGGGTaGAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: SSVSSSIKRANPGLG*NLHEHPSSLAGSPQ
Trigger: CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGATGAAGACACTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR CCA 90 bp CTGAGTCCTCAGTGTCTTCATCCATCAAGAGGGCTAATCCAGGACTaGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: LSPQCLHPSRGLIQD*GATCMSIPLAWLAA
Trigger: GGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGATGAAGACACTGAGGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR CCA 90 bp CCTTTTCATTTCTTGCTCCACCTTCCCCTTGGGTATGACCAAAGCTaGATCATAGGCATGTGTTATGTTCCAGCTCATAGGCAAGGAAAG +
Preference number: 1 (lower is better)
Translates to: PFHFLLHLPLGYDQS*IIGMCYVPAHRQGK
Trigger: CTTTCCTTGCCTATGAGCTGGAACATAACACATGCCTATGATCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCAAGAAATGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR GCA 90 bp TCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTaGCACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATC +
Preference number: 1 (lower is better)
Translates to: SKFSSVTAEQILAGS*HSQFHVFSFAPPSI
Trigger: GATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGACTGGGGTGCAACCTaGATGAGCATCCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRDWGAT*MSIPLA
Trigger: GGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR TCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGTGTCCTCAGGTAAGTaGCTCAGCCTCTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPVSSGK*LSLSES
Trigger: GGACTCAGAGAGGCTGAGTCACTTACCTGAGGACAC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCTTGGCCTGCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPLGLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGCAGGCCAAG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACCTTCAATCCCAGCTCTaGCTGGCTGGGTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHLQSQL*LAGCPQ
Trigger: CTGAGGACACCCAGCCAGGCAGAGCTGGGATTGAAG...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCGACTGGGGTGCAACCTaGATGAGCATCCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLDWGAT*MSIPLA
Trigger: GGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTC...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAGAACTCAGTCCATGCTaGACCTGGATGCAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQELSPC*TWMQGS
Trigger: GCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTC...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGGGCTAATCCAGGACTaGGGTGCAACCTGCATGAGC +
Preference number: 2 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGGLIQD*GATCMS
Trigger: GCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCTCCGTGTCTTCCCCATaGGGGCCAAGCCCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGSVSSP*GPSPSL
Trigger: TAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGA...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAGTGATCCTTCCACCTTaGCCTGCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQVILPP*PAKVLG
Trigger: TCCCAGCACTTTGGCAGGCCAAGGTGGAAGGATCAC...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR TCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTACTCCTAGCTCTAAGTaGTCCTTCCACCTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGATPSSK*SFHLGL
Trigger: CAGGCCAAGGTGGAAGGATCACTTAGAGCTAGGAGT...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAATCCAGGACTGGGGTaGAACCTGCATGAGCATCCC +
Preference number: 2 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGNPGLG*NLHEHP
Trigger: GGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATT...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR TCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGTGACTCAGCCTCTCTaGGTCCTCAGTGTCTTCATC +
Preference number: 2 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMVTQPL*VLSVFI
Trigger: GATGAAGACACTGAGGACTCAGAGAGGCTGAGTCAC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR GCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCATGTATTTTCCTTTaGTCCACCTTCCATCCGTGT +
Preference number: 2 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHSCIFL*STFHPC
Trigger: ACACGGATGGAAGGTGGAGCAAAGGAAAATACATGA...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR CAA 90 bp TTCTATCCATGCAGTCATTCAGGGATTCAGGTTCCTTTTCATTTCTaGCTCCACCTTCCCCTTGGGTATGACCAAAGCTGGATCATAGGC +
Preference number: 2 (lower is better)
Translates to: FYPCSHSGIQVPFHF*LHLPLGYDQSWIIG
Trigger: GCCTATGATCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCAAGAAATGAAAAGGAACCTGAATCCCTGAATGACTGCATGGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR GCA 72 bp CCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTaGATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: PSRGLIQDWGAT*MSIPLAWLAAP
Trigger: GGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR GCA 72 bp TCTTCATCCATCAAGAGGGCTAATCCAGGACTGGGGTaGAACCTGCATGAGCATCCCTCTAGCCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: SSSIKRANPGLG*NLHEHPSSLAG
Trigger: GCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGATGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR CCA 72 bp CAGTGTCTTCATCCATCAAGAGGGCTAATCCAGGACTaGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGG +
Preference number: 3 (lower is better)
Translates to: QCLHPSRGLIQD*GATCMSIPLAW
Trigger: CCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGATGAAGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR TCA 72 bp CCCCCACCCAGACCCCGTGTTGGCATATGTCACTTCTaGCCACATTCTGTTGTCAAGAACTCAGTCCATGCT +
Preference number: 3 (lower is better)
Translates to: PPPRPRVGICHF*PHSVVKNSVHA
Trigger: AGCATGGACTGAGTTCTTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR CAA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCTTCATGTATTTTCCTTaGCTCCACCTTCCATCCGTG +
Preference number: 3 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPFMYFP*LHLPSV
Trigger: CACGGATGGAAGGTGGAGCAAAGGAAAATACATGAA...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR GCA 72 bp GCAGTCATTCAGGGATTCAGGTTCCTTTTCATTTCTTaGTCCACCTTCCCCTTGGGTATGACCAAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: AVIQGFRFLFIS*STFPLGMTKAG
Trigger: TCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCAAGAAATGAAAAGGAACCTGAATCCCTGAATGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR CCA 72 bp TTCTTGCTCCACCTTCCCCTTGGGTATGACCAAAGCTaGATCATAGGCATGTGTTATGTTCCAGCTCATAGG +
Preference number: 3 (lower is better)
Translates to: FLLHLPLGYDQS*IIGMCYVPAHR
Trigger: CCTATGAGCTGGAACATAACACATGCCTATGATCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR-3UTR CAA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCTTCATGTATTTTCCTTaGCTCCACCTTCCATCCGTG +
Preference number: 3 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGFMYFP*LHLPSV
Trigger: CACGGATGGAAGGTGGAGCAAAGGAAAATACATGAA...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR TCA 72 bp TCCTTTTCATTTCTTGCTCCACCTTCCCCTTGGGTATaGCCAAAGCTGGATCATAGGCATGTGTTATGTTCC +
Preference number: 3 (lower is better)
Translates to: SFSFLAPPSPWV*PKLDHRHVLCS
Trigger: GGAACATAACACATGCCTATGATCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCAAGAAATGAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGGTGGCCTGGGCGGGCTaGGAGGACTCCATAACCGGC +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQVAWAG*EDSITG
Trigger: GCCGGTTATGGAGTCCTCCCAGCCCGCCCAGGCCAC...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGGCCCGGCGCTGCCCTaGGGACGCGTCCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRGPALP*GRVRWK
Trigger: TTTCCAGCGGACGCGTCCCCAGGGCAGCGCCGGGCC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGTATGGCGGGGGTCCCTaGAGGGGCATCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQYGGGP*RGILES
Trigger: CGACTCCAAGATGCCCCTCCAGGGACCCCCGCCATA...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTCCGCGCGGCCGCGCTaGTCCTCTTCGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRSARPR*SSSSSG
Trigger: CCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGCCTGGAGGGGCATCTTaGAGTCGCCAAAGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQPGGAS*SRQSVG
Trigger: GCCAACGCTTTGGCGACTCCAAGATGCCCCTCCAGG...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGGGGGCTGGCCTGAACTaGTGTTGGCAGGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQGAGLN*CWQDQE
Trigger: TTCCTGATCCTGCCAACAGCAGTTCAGGCCAGCCCC...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGCTTCAATCCCAGCTCTaGCTGGCTGGGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQLQSQL*LAGCPQ
Trigger: CTGAGGACACCCAGCCAGGCAGAGCTGGGATTGAAG...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGCAGCAGCGCCAGCTTaGGCAGCGGCCACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRAAAPA*AAATAR
Trigger: TCTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTGC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGGGGGCCAGAGAGGCTaGCCTGCCTTAGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAGGQRG*PALVPQ
Trigger: CTGGGGCACTAAGGCAGGCCAGCCTCTCTGGCCCCC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGTGCAGACGGAGGGGCTaGTTCCACTCTGTGCACACA +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQCRRRG*FHSVHT
Trigger: TGTGTGCACAGAGTGGAACCAGCCCCTCCGTCTGCA...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGCGGTACTTTTGGCTCTaGAGGTGTAACTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQRYFWL*RCNSEG
Trigger: CCCCTCCGAGTTACACCTCCAGAGCCAAAAGTACCG...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGGCAGAAGGCGGTGTCTaGAAGGACAAAATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQAEGGV*KDKMGL
Trigger: GAGCCCCATTTTGTCCTTCCAGACACCGCCTTCTGC...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTGGCCTCGAAGCTGGTaGCTTGGGACCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRWPRSW*LGTSPH
Trigger: GTGGGGAGAGGTCCCAAGGCACCAGCTTCGAGGCCA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGGCAGGTAATTCCTTCTaGACTCAGCTCACGACCTCC +
Preference number: 4 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQAGNSF*TQLTTS
Trigger: GGAGGTCGTGAGCTGAGTCCAGAAGGAATTACCTGC...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTATGGCGGGGGTCCCTaGAGGGGCATCTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRYGGGP*RGILES
Trigger: CGACTCCAAGATGCCCCTCCAGGGACCCCCGCCATA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGAGGTGGCCTCGAAGCTaGTGCCTTGGGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRRWPRS*CLGTSP
Trigger: GGGAGAGGTCCCAAGGCACCAGCTTCGAGGCCACCT...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACAGTCAAGCGGGGCGGTaGCCTGGGCGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHSQAGR*PGRAGR
Trigger: CCTCCCAGCCCGCCCAGGCCACCGCCCCGCTTGACT...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGGCAAGGAAAGGATGTaGGGGAGCCCCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAGKERM*GSPHPD
Trigger: GTCTGGGTGGGGGCTCCCCCACATCCTTTCCTTGCC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCACTGGTAACAGAGCACTaGGGTTCCCAGGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLALVTEH*GSQGEA
Trigger: GGCTTCCCCCTGGGAACCTCAGTGCTCTGTTACCAG...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCACATGTGGGGCTGGCCTaGACTGCTGTTGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAHVGLA*TAVGRI
Trigger: GATCCTGCCAACAGCAGTTCAGGCCAGCCCCACATG...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCCGCGCGGCCGCGCTaGTCCTCTTCGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHSARPR*SSSSSG
Trigger: CCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGA...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCAGTCCACTACATaGTCCAGTGGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAAQSTT*SSGSPG
Trigger: GCCTGGGGAACCACTGGAGCATGTAGTGGACTGGGC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTGGGCCTCAGGTACTTaGTCCATGTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRWASGT*SMWGWP
Trigger: AGGCCAGCCCCACATGGAGCAAGTACCTGAGGCCCA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTCTCCTCTTCGAGCTCTaGGTACAGCGCCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSLLFEL*VQRPRR
Trigger: CCGCCTCGGGCGCTGTACCCAGAGCTCGAAGAGGAG...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGGCCCGGCGCTGCCCTaGGGACGCGTCCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGGPALP*GRVRWK
Trigger: TTTCCAGCGGACGCGTCCCCAGGGCAGCGCCGGGCC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCAGTCAAGCGGGGCGGTaGCCTGGGCGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLSQAGR*PGRAGR
Trigger: CCTCCCAGCCCGCCCAGGCCACCGCCCCGCTTGACT...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCACCCCAGCCAGACGTGTaGTTCAGGCCAGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAPQPDV*FRPEPV
Trigger: CACAGGTTCTGGCCTGAACCACACGTCTGGCTGGGG...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACCCCAGCTTGTGGCGTTaGCAGCGGACACCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHPSLWR*QRTPWP
Trigger: GGGCCAGGGTGTCCGCTGTCAACGCCACAAGCTGGG...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCACCGTCCGGCTGCCACTaGCACAGTCTGGGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAPSGCH*HSLGFV
Trigger: AACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGG...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGGGGCTGGCCTGAACTaGTGTTGGCAGGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRGAGLN*CWQDQE
Trigger: TTCCTGATCCTGCCAACAGCAGTTCAGGCCAGCCCC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGACTGGGGTGCAACCTaGATGAGCATCCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLADWGAT*MSIPLA
Trigger: GGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGGGCCCAATGGACAGTaGCCTCCAGGGGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPGPNGQ*PPGGHP
Trigger: AGGATGACCCCCTGGAGGCCACTGTCCATTGGGCCC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAAGATGGCCATGTAGGTaGGGCCCAATGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLARWPCR*GPMDSG
Trigger: GCCACTGTCCATTGGGCCCCACCTACATGGCCATCT...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCCCTCTCCCCACGCTATaGCGGGGGTCCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGPLPTL*RGSLEG
Trigger: CCCCTCCAGGGACCCCCGCCATAGCGTGGGGAGAGG...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTCGAAGCTGGTGCCTTaGGACCTCTCCCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRSKLVP*DLSPRY
Trigger: ATAGCGTGGGGAGAGGTCCCAAGGCACCAGCTTCGA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCATCGAAGCTGGTGCCTTaGGACCTCTCCCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLASKLVP*DLSPRY
Trigger: ATAGCGTGGGGAGAGGTCCCAAGGCACCAGCTTCGA...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCATGCAGACGGAGGGGCTaGTTCCACTCTGTGCACACA +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLACRRRG*FHSVHT
Trigger: TGTGTGCACAGAGTGGAACCAGCCCCTCCGTCTGCA...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCATGCTCCATGTGGGGCTaGCCTGAACTGCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLACSMWG*PELLLA
Trigger: TGCCAACAGCAGTTCAGGCCAGCCCCACATGGAGCA...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGGGCTAATCCAGGACTaGGGTGCAACCTGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAGLIQD*GATCMS
Trigger: GCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGGCAAGGAAAGGATGTaGGGGAGCCCCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPGKERM*GSPHPD
Trigger: GTCTGGGTGGGGGCTCCCCCACATCCTTTCCTTGCC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCCCCAGCTTGTGGCGTTaGCAGCGGACACCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGPSLWR*QRTPWP
Trigger: GGGCCAGGGTGTCCGCTGTCAACGCCACAAGCTGGG...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCTGGTAACAGAGCACTaGGGTTCCCAGGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPLVTEH*GSQGEA
Trigger: GGCTTCCCCCTGGGAACCTCAGTGCTCTGTTACCAG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGAGGGGACCCCGACAGTaGAATTCCCTGGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRRGPRQ*NSLVTE
Trigger: CTCTGTTACCAGGGAATTTCACTGTCGGGGTCCCCT...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCATGTGGGGCTGGCCTaGACTGCTGTTGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPHVGLA*TAVGRI
Trigger: GATCCTGCCAACAGCAGTTCAGGCCAGCCCCACATG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGTGTCCTCAGGTAAGTaGCTCAGCCTCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRVSSGK*LSLSES
Trigger: GGACTCAGAGAGGCTGAGTCACTTACCTGAGGACAC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAACCAGCTCCGTCCGGCTaGCACTGCCACAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQPAPSG*HCHSLG
Trigger: ACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGG...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAATCCCCAGGCCCCGGTTaGCAGGTCACCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQSPGPG*QVTSSS
Trigger: GGAGCTACTGGTGACCTGGCAACCGGGGCCTGGGGA...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCATGCCACTCACATTCATaGAGACGGAGGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLACHSHS*RRRGWF
Trigger: GAACCAGCCCCTCCGTCTGCATGAATGTGAGTGGCA...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCTGGGCCTCAGGTACTTaGTCCATGTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPWASGT*SMWGWP
Trigger: AGGCCAGCCCCACATGGAGCAAGTACCTGAGGCCCA...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCGCAGCAGCGCCAGCTTaGGCAGCGGCCACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLAAAPA*AAATAR
Trigger: TCTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTGC...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACGCTGTTCCCGAGGAATaGCCACCCAGCTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHAVPEE*PPSSVR
Trigger: CCGGACGGAGCTGGGTGGCCATTCCTCGGGAACAGC...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAGTAGGTGGGGCCCAATaGACAGTGGCCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQVGGAQ*TVASRG
Trigger: CCCCCTGGAGGCCACTGTCCATTGGGCCCCACCTAC...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGTGGCCTGGGCGGGCTaGGAGGACTCCATAACCGGC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGVAWAG*EDSITG
Trigger: GCCGGTTATGGAGTCCTCCCAGCCCGCCCAGGCCAC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGTGATCCTTCCACCTTaGCCTGCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAVILPP*PAKVLG
Trigger: TCCCAGCACTTTGGCAGGCCAAGGTGGAAGGATCAC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGACTGCGGTCACAGTaGTTCGATAGGGGACCCCGA +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSRLRSQ*FDRGPR
Trigger: TCGGGGTCCCCTATCGAATCACTGTGACCGCAGTCT...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGTGTTATCTGGTAGATaGAGCCGGAGGATGGGACCA +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRVLSGR*SRRMGP
Trigger: TGGTCCCATCCTCCGGCTTCATCTACCAGATAACAC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGTGTTATCTGGTAGATaGAGCCGGAGGATGGGACCA +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAVLSGR*SRRMGP
Trigger: TGGTCCCATCCTCCGGCTTCATCTACCAGATAACAC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTCCGTCCGGCTGCCACTaGCACAGTCTGGGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSPSGCH*HSLGFV
Trigger: AACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGG...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCTCCCCAGGCCCCGGTTaGCAGGTCACCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGSPGPG*QVTSSS
Trigger: GGAGCTACTGGTGACCTGGCAACCGGGGCCTGGGGA...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCTGGTTCCACTCTGTaGACACAAGGTGTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAAGSTL*TQGVVG
Trigger: ACCCACTACACCTTGTGTGCACAGAGTGGAACCAGC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTCTTCAATCCCAGCTCTaGCTGGCTGGGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSLQSQL*LAGCPQ
Trigger: CTGAGGACACCCAGCCAGGCAGAGCTGGGATTGAAG...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCCTCCTCTTCGAGCTCTaGGTACAGCGCCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGLLFEL*VQRPRR
Trigger: CCGCCTCGGGCGCTGTACCCAGAGCTCGAAGAGGAG...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACGGGCCCAATGGACAGTaGCCTCCAGGGGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHGPNGQ*PPGGHP
Trigger: AGGATGACCCCCTGGAGGCCACTGTCCATTGGGCCC...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGATGGCCATGTAGGTaGGGCCCAATGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSRWPCR*GPMDSG
Trigger: GCCACTGTCCATTGGGCCCCACCTACATGGCCATCT...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAACCCACTCCGCCCCACTaGGAATTAGGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQPTPPH*ELGSSS
Trigger: GCTGCTGCTCCCTAATTCCCAGTGGGGCGGAGTGGG...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCTGCTCCATGTGGGGCTaGCCTGAACTGCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPCSMWG*PELLLA
Trigger: TGCCAACAGCAGTTCAGGCCAGCCCCACATGGAGCA...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGGTACTTGCTCCATGTaGGGCTGGCCTGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPGTCSM*GWPELL
Trigger: CAGCAGTTCAGGCCAGCCCCACATGGAGCAAGTACC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTTCCGTGTCTTCCCCATaGGGGCCAAGCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSSVSSP*GPSPSL
Trigger: TAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGA...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGCGTGAGCCACTGTGCTaGGGTCCAAATTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRREPLC*GPNSVL
Trigger: CAGAACTGAATTTGGACCCCAGCACAGTGGCTCACG...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCTGGCCTCGAAGCTGGTaGCTTGGGACCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLWPRSW*LGTSPH
Trigger: GTGGGGAGAGGTCCCAAGGCACCAGCTTCGAGGCCA...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTGAACTCAGTCCATGCTaGACCTGGATGCAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSELSPC*TWMQGS
Trigger: GCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTC...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGCAGAACTTTATGAGATaGCCATGTAGGTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRQNFMR*PCRWGP
Trigger: TGGGCCCCACCTACATGGCCATCTCATAAAGTTCTG...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGGCTAGCTCCAAATCTTaGATCTCAACAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRASSKS*ISTGVR
Trigger: CCTGACCCCTGTTGAGATCCAAGATTTGGAGCTAGC...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCTAGCTCCAAATCTTaGATCTCAACAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAASSKS*ISTGVR
Trigger: CCTGACCCCTGTTGAGATCCAAGATTTGGAGCTAGC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTTCTGGAAGGACAAAATaGGGCTCCACTCGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSSGRTK*GSTRPT
Trigger: TGTGGGGCGAGTGGAGCCCCATTTTGTCCTTCCAGA...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCCCCACTCCGCCCCACTaGGAATTAGGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGPTPPH*ELGSSS
Trigger: GCTGCTGCTCCCTAATTCCCAGTGGGGCGGAGTGGG...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACCACTACATGCTCCAGTaGTTCCCCAGGCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHHYMLQ*FPRPRL
Trigger: CAACCGGGGCCTGGGGAACCACTGGAGCATGTAGTG...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGGTGGCCTCGAAGCTaGTGCCTTGGGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGRWPRS*CLGTSP
Trigger: GGGAGAGGTCCCAAGGCACCAGCTTCGAGGCCACCT...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCCAGCTCCTCAGGTGTaGGCAGGAAGTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPPAPQV*AGSASH
Trigger: ATGAGAAGCACTTCCTGCCCACACCTGAGGAGCTGG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTGTTTGTCAGACATGGTaGGCTGTTCCCGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSVCQTW*AVPEEW
Trigger: CCATTCCTCGGGAACAGCTCACCATGTCTGACAAAC...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCCCACAGAGGTTCCCTaGTACCCACACATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPPTEVP*YPHIFW
Trigger: CCAAAAGATGTGTGGGTATCAGGGAACCTCTGTGGG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACCCAAAGAGAGGTTGGTaGGAGGCTCCCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHPKRGW*EAPSLW
Trigger: CCACAAGCTGGGAGCCTCTCACCAACCTCTCTTTGG...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTAGACTGCGGTCACAGTaGTTCGATAGGGGACCCCGA +
Preference number: 4 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGARLRSQ*FDRGPR
Trigger: TCGGGGTCCCCTATCGAATCACTGTGACCGCAGTCT...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACACAAGGTGTAGTGGGTaGGGTGGCCTCGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHTRCSG*GGLEAG
Trigger: ACCAGCTTCGAGGCCACCTCACCCACTACACCTTGT...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTACTCCTAGCTCTAAGTaGTCCTTCCACCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSTPSSK*SFHLGL
Trigger: CAGGCCAAGGTGGAAGGATCACTTAGAGCTAGGAGT...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGCTGGTTCCACTCTGTaGACACAAGGTGTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPAGSTL*TQGVVG
Trigger: ACCCACTACACCTTGTGTGCACAGAGTGGAACCAGC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTCCCACAAGAATAGGATaGCCGGCAGAACTTTCCACC +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSPTRIG*PAELST
Trigger: GGTGGAAAGTTCTGCCGGGCATCCTATTCTTGTGGG...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGGTGTGGGCAGGAAGTaGTTCTCATACCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPGVGRK*FSYPES
Trigger: TGACTCTGGGTATGAGAAGCACTTCCTGCCCACACC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTTGGGGACGCGTCCGCTaGAAAAGCACCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGAWGRVR*KSTHNR
Trigger: TCTGTTGTGGGTGCTTTTCCAGCGGACGCGTCCCCA...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCAGGGGGCCAGAGAGGCTaGCCTGCCTTAGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPGGQRG*PALVPQ
Trigger: CTGGGGCACTAAGGCAGGCCAGCCTCTCTGGCCCCC...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCCACTACATGCTCCAGTaGTTCCCCAGGCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLHYMLQ*FPRPRL
Trigger: CAACCGGGGCCTGGGGAACCACTGGAGCATGTAGTG...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCCCTGGAGGGGCATCTTaGAGTCGCCAAAGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGPGGAS*SRQSVG
Trigger: GCCAACGCTTTGGCGACTCCAAGATGCCCCTCCAGG...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTTCCGTGTCTTCCCCATaGGGGCCAAGCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGASVSSP*GPSPSL
Trigger: TAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGA...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTACCCAGACCCCGTGTTaGCATATGTCACTTCTGACC +
Preference number: 4 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSTQTPC*HMSLLT
Trigger: GGTCAGAAGTGACATATGCCAACACGGGGTCTGGGT...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACGTGTCCTCAGGTAAGTaGCTCAGCCTCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHVSSGK*LSLSES
Trigger: GGACTCAGAGAGGCTGAGTCACTTACCTGAGGACAC...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTGCCACTCACATTCATaGAGACGGAGGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHCHSHS*RRRGWF
Trigger: GAACCAGCCCCTCCGTCTGCATGAATGTGAGTGGCA...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGACTGGGGTGCAACCTaGATGAGCATCCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGDWGAT*MSIPLA
Trigger: GGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAAATCCAGGACTGGGGTaGAACCTGCATGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQNPGLG*NLHEHP
Trigger: GGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATT...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCATTCCTTTTCATTTCTTaGTCCACCTTCCCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAFLFIS*STFPLG
Trigger: ACCCAAGGGGAAGGTGGAGCAAGAAATGAAAAGGAA...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTTCCTTTTCATTTCTTaGTCCACCTTCCCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRFLFIS*STFPLG
Trigger: ACCCAAGGGGAAGGTGGAGCAAGAAATGAAAAGGAA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACCGGTACTTTTGGCTCTaGAGGTGTAACTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHRYFWL*RCNSEG
Trigger: CCCCTCCGAGTTACACCTCCAGAGCCAAAAGTACCG...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGCTGTTCCCGAGGAATaGCCACCCAGCTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMAVPEE*PPSSVR
Trigger: CCGGACGGAGCTGGGTGGCCATTCCTCGGGAACAGC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCAGTAGGTGGGGCCCAATaGACAGTGGCCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPVGGAQ*TVASRG
Trigger: CCCCCTGGAGGCCACTGTCCATTGGGCCCCACCTAC...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCTACCCACACATCTTTTaGAGCAGAAGGCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPYPHIF*SRRRCL
Trigger: CAGACACCGCCTTCTGCTCCAAAAGATGTGTGGGTA...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCGGTACTTGCTCCATGTaGGGCTGGCCTGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLGTCSM*GWPELL
Trigger: CAGCAGTTCAGGCCAGCCCCACATGGAGCAAGTACC...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACGTTTGTCAGACATGGTaGGCTGTTCCCGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHVCQTW*AVPEEW
Trigger: CCATTCCTCGGGAACAGCTCACCATGTCTGACAAAC...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTCCCACAAGAATAGGATaGCCGGCAGAACTTTCCACC +
Preference number: 4 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGAPTRIG*PAELST
Trigger: GGTGGAAAGTTCTGCCGGGCATCCTATTCTTGTGGG...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACGGTGTGGGCAGGAAGTaGTTCTCATACCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHGVGRK*FSYPES
Trigger: TGACTCTGGGTATGAGAAGCACTTCCTGCCCACACC...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTCATGTATTTTCCTTTaGTCCACCTTCCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRSCIFL*STFHPC
Trigger: ACACGGATGGAAGGTGGAGCAAAGGAAAATACATGA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCATCATGTATTTTCCTTTaGTCCACCTTCCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: LIQDWGATCMSIPLAWLASCIFL*STFHPC
Trigger: ACACGGATGGAAGGTGGAGCAAAGGAAAATACATGA...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGAGGTGTGTGCCATCATaGCCAGCTAATTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRRCVPS*PANCFC
Trigger: ACAAAAACAATTAGCTGGGCATGATGGCACACACCT...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAATTACCCAGCCTGGAGTaGAGTGGTGCAATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQLPSLE*SGAIRG
Trigger: ACCTCTGATTGCACCACTGCACTCCAGGCTGGGTAA...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTGCCACTGCCACAGTCTaGGTTTTGTTGGAACGGTAC +
Preference number: 4 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGAATATV*VLLERY
Trigger: GTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGC...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCTCTGGAAGGACAAAATaGGGCTCCACTCGCCCCACA +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLSGRTK*GSTRPT
Trigger: TGTGGGGCGAGTGGAGCCCCATTTTGTCCTTCCAGA...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGCAGAAGGCGGTGTCTaGAAGGACAAAATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGAEGGV*KDKMGL
Trigger: GAGCCCCATTTTGTCCTTCCAGACACCGCCTTCTGC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTACCCAGACCCCGTGTTaGCATATGTCACTTCTGACC +
Preference number: 4 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGATQTPC*HMSLLT
Trigger: GGTCAGAAGTGACATATGCCAACACGGGGTCTGGGT...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGTGACTCAGCCTCTCTaGGTCCTCAGTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGVTQPL*VLSVFI
Trigger: GATGAAGACACTGAGGACTCAGAGAGGCTGAGTCAC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCAGCCCAGTCCACTACATaGTCCAGTGGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPAQSTT*SSGSPG
Trigger: GCCTGGGGAACCACTGGAGCATGTAGTGGACTGGGC...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCTCCAGCGATGGTAGATaGTGTCACCCACAGCTCACA +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLSSDGR*CHPQLT
Trigger: TGTGAGCTGTGGGTGACAGCATCTACCATCGCTGGA...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCTCCAGCGATGGTAGATaGTGTCACCCACAGCTCACA +
Preference number: 4 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGSSDGR*CHPQLT
Trigger: TGTGAGCTGTGGGTGACAGCATCTACCATCGCTGGA...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCGCGTTTGGCTTCATTTaGGTTTCTAGGTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPAFGFI*VSRFTK
Trigger: CTTCGTGAACCTAGAAACCCAAATGAAGCCAAACGC...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACCAGAACTTTATGAGATaGCCATGTAGGTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHQNFMR*PCRWGP
Trigger: TGGGCCCCACCTACATGGCCATCTCATAAAGTTCTG...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAATACCCACACATCTTTTaGAGCAGAAGGCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQYPHIF*SRRRCL
Trigger: CAGACACCGCCTTCTGCTCCAAAAGATGTGTGGGTA...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGACAAGGTGTAGTGGGTaGGGTGGCCTCGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMTRCSG*GGLEAG
Trigger: ACCAGCTTCGAGGCCACCTCACCCACTACACCTTGT...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAATTGGAACGGTACTTTTaGCTCTGGAGGTGTAACTCG +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQLERYF*LWRCNS
Trigger: CGAGTTACACCTCCAGAGCCAAAAGTACCGTTCCAA...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGCTAATCCAGGACTaGGGTGCAACCTGCATGAGC +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMGLIQD*GATCMS
Trigger: GCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCGCAAGGGAGCTGAGATaGTGCCCAAATGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLARELR*CPNAVF
Trigger: AAACACTGCATTTGGGCACCATCTCAGCTCCCTTGC...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
3UTR CAA 72 bp CCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTaGTCAAGAACTCAGTCCATGCTGCACCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: PVLAYVTSDHIL*SRTQSMLHLDA
Trigger: TGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCCAGATCAGAACTTTATaGGATGGCCATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLQIRTL*DGHVGG
Trigger: CCCACCTACATGGCCATCTCATAAAGTTCTGATCTG...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCAAATCCAGGACTGGGGTaGAACCTGCATGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPNPGLG*NLHEHP
Trigger: GGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATT...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCTTGGAACGGTACTTTTaGCTCTGGAGGTGTAACTCG +
Preference number: 4 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLLERYF*LWRCNS
Trigger: CGAGTTACACCTCCAGAGCCAAAAGTACCGTTCCAA...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAACAGTCTGGGTTTTGTTaGAACGGTACTTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQQSGFC*NGTFGS
Trigger: AGAGCCAAAAGTACCGTTCCAACAAAACCCAGACTG...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAGCGTTTGGCTTCATTTaGGTTTCTAGGTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQAFGFI*VSRFTK
Trigger: CTTCGTGAACCTAGAAACCCAAATGAAGCCAAACGC...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp GGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACACACTTTGTAGCCAGTaGCTAGCTCCAAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSKFSSVTAEQILAGSCHTLCSQ*LAPNLG
Trigger: TCCAAGATTTGGAGCTAGCCACTGGCTACAAAGTGT...GTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGTGATCCTTCCACCTTaGCCTGCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMVILPP*PAKVLG
Trigger: TCCCAGCACTTTGGCAGGCCAAGGTGGAAGGATCAC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCAGTGACTCAGCCTCTCTaGGTCCTCAGTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPVTQPL*VLSVFI
Trigger: GATGAAGACACTGAGGACTCAGAGAGGCTGAGTCAC...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATTACCCAGCCTGGAGTaGAGTGGTGCAATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPLPSLE*SGAIRG
Trigger: ACCTCTGATTGCACCACTGCACTCCAGGCTGGGTAA...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGCCACTGCCACAGTCTaGGTTTTGTTGGAACGGTAC +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMATATV*VLLERY
Trigger: GTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCAGCAGGTAATTCCTTCTaGACTCAGCTCACGACCTCC +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPAGNSF*TQLTTS
Trigger: GGAGGTCGTGAGCTGAGTCCAGAAGGAATTACCTGC...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCACGTGAGCCACTGTGCTaGGGTCCAAATTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPREPLC*GPNSVL
Trigger: CAGAACTGAATTTGGACCCCAGCACAGTGGCTCACG...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAGGGTATGACCAAAGCTaGATCATAGGCATGTGTTAT +
Preference number: 4 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQGYDQS*IIGMCY
Trigger: ATAACACATGCCTATGATCCAGCTTTGGTCATACCC...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGCAAGGGAGCTGAGATaGTGCCCAAATGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMARELR*CPNAVF
Trigger: AAACACTGCATTTGGGCACCATCTCAGCTCCCTTGC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR TCA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCACAGATCAGAACTTTATaGGATGGCCATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPQIRTL*DGHVGG
Trigger: CCCACCTACATGGCCATCTCATAAAGTTCTGATCTG...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR GCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGAGGTGTGTGCCATCATaGCCAGCTAATTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMRCVPS*PANCFC
Trigger: ACAAAAACAATTAGCTGGGCATGATGGCACACACCT...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CCA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGTATGACCAAAGCTaGATCATAGGCATGTGTTAT +
Preference number: 4 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMGYDQS*IIGMCY
Trigger: ATAACACATGCCTATGATCCAGCTTTGGTCATACCC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp GAGCCCCGAGTCCGGCCCAGCCTTGCCGGGTCCGCGCGGCCGCGCTaGTCCTCTTCGAGCTCTGGGTACAGCGCCCGAGGCGGCAACGGG +
Preference number: 5 (lower is better)
Translates to: EPRVRPSLAGSARPR*SSSSSGYSARGGNG
Trigger: CCCGTTGCCGCCTCGGGCGCTGTACCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGACCCGGCAAGGCTGGGCCGGACTCGGGGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp CTCCCCGCATGGCGTCCCTCGGGAGCCCCGAGTCCGGCCCAGCCTTaGCGGGTCCGCGCGGCCGCGCTGCTCCTCTTCGAGCTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LPAWRPSGAPSPAQP*RVRAAALLLFELWV
Trigger: TACCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGACCCGGCAAGGCTGGGCCGGACTCGGGGCTCCCGAGGGACGCCATGCGGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 90 bp GGCAGGAAGTGCTTCTCATACCCAGAGTCAAGCGGGGCGGTGGCCTaGGCGGGCTGGGAGGACTCCATAACCGGCGGGGGCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: GRKCFSYPESSGAVA*AGWEDSITGGGSIS
Trigger: GGAGATGGAGCCCCCGCCGGTTATGGAGTCCTCCCAGCCCGCCCAGGCCACCGCCCCGCTTGACTCTGGGTATGAGAAGCACTTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGTCCCAGCTTGTGGCGTaGACAGCGGACACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQSQLVA*TADTLA
Trigger: GGCCAGGGTGTCCGCTGTCAACGCCACAAGCTGGGA...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGGCAGCAGCGCCAGCTaGGGCAGCGGCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAGSSAS*GSGHSQ
Trigger: CTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTGCC...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp CGAGCCCAGTCCACTACATGCTCCAGTGGTTCCCCAGGCCCCGGTTaGCAGGTCACCAGTAGCTCCGTGCTCCCAGCGATGCTGCTGACT +
Preference number: 5 (lower is better)
Translates to: RAQSTTCSSGSPGPG*QVTSSSVLPAMLLT
Trigger: AGTCAGCAGCATCGCTGGGAGCACGGAGCTACTGGTGACCTGGCAACCGGGGCCTGGGGAACCACTGGAGCATGTAGTGGACTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp AAGCCGGAGGATGGGACCAGGAGGGCCCTGTCCAGCGATGGTAGATaGTGTCACCCACAGCTCACAGGGACCCCAAGGAAGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KPEDGTRRALSSDGR*CHPQLTGTPRKVRQ
Trigger: CTGCCTGACCTTCCTTGGGGTCCCTGTGAGCTGTGGGTGACAGCATCTACCATCGCTGGACAGGGCCCTCCTGGTCCCATCCTCCGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS TCA 90 bp AGACGGAGGGGCTGGTTCCACTCTGTGCACACAAGGTGTAGTGGGTaGGGTGGCCTCGAAGCTGGTGCCTTGGGACCTCTCCCCACGCTA +
Preference number: 5 (lower is better)
Translates to: RRRGWFHSVHTRCSG*GGLEAGALGPLPTL
Trigger: TAGCGTGGGGAGAGGTCCCAAGGCACCAGCTTCGAGGCCACCTCACCCACTACACCTTGTGTGCACAGAGTGGAACCAGCCCCTCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGCTCGAAGCTGGTGCCTaGGGACCTCTCCCCACGCTA +
Preference number: 5 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRLEAGA*GPLPTL
Trigger: TAGCGTGGGGAGAGGTCCCAAGGCACCAGCTTCGAG...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp GAGCTGTTCCCGAGGAATGGCCACCCAGCTCCGTCCGGCTGCCACTaGCACAGTCTGGGTTTTGTTGGAACGGTACTTTTGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: ELFPRNGHPAPSGCH*HSLGFVGTVLLALE
Trigger: CTCCAGAGCCAAAAGTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGGGTGGCCATTCCTCGGGAACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGGCAGCAGCGCCAGCTaGGGCAGCGGCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGGSSAS*GSGHSQ
Trigger: CTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTGCC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAGCCCCCAGGTGACACTCTGTGTGTaGCCACTCACATTCATGCAG +
Preference number: 5 (lower is better)
Translates to: GLGCNLHEHPSSLAGSPQVTLCV*PLTFMQ
Trigger: CTGCATGAATGTGAGTGGCAACACACAGAGTGTCAC...CTGGGGGCTGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTCTGGGCCTCAGGTACTaGCTCCATGTGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSLGLRY*LHVGLA
Trigger: GGCCAGCCCCACATGGAGCAAGTACCTGAGGCCCAG...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp CATGGTGAGCTGTTCCCGAGGAATGGCCACCCAGCTCCGTCCGGCTaGCACTGCCACAGTCTGGGTTTTGTTGGAACGGTACTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: HGELFPRNGHPAPSG*HCHSLGFVGTVLLA
Trigger: AGCCAAAAGTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGGGTGGCCATTCCTCGGGAACAGCTCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp GTTGCCACTCACATTCATGCAGACGGAGGGGCTGGTTCCACTCTGTaGACACAAGGTGTAGTGGGTGAGGTGGCCTCGAAGCTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: VATHIHADGGAGSTL*TQGVVGEVASKLVP
Trigger: AGGCACCAGCTTCGAGGCCACCTCACCCACTACACCTTGTGTGCACAGAGTGGAACCAGCCCCTCCGTCTGCATGAATGTGAGTGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCCCTGGAGGGGCATCTaGGAGTCGCCAAAGCGTTGG +
Preference number: 5 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPPWRGI*ESPKRW
Trigger: CCAACGCTTTGGCGACTCCAAGATGCCCCTCCAGGG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp ATGTGTTATGTTCCAGCTCATAGGCAAGGAAAGGATGTGGGGGAGCCCCCACCCCTCGAAGCTGGTGCCTaGGGACCTCTCCCCACGCTA +
Preference number: 5 (lower is better)
Translates to: MCYVPAHRQGKDVGEPPPLEAGA*GPLPTL
Trigger: TAGCGTGGGGAGAGGTCCCAAGGCACCAGCTTCGAG...GGGTGGGGGCTCCCCCACATCCTTTCCTTGCCTATGAGCTGGAACATAACACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAAGTGATCCTTCCACCTaGGCCTGCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LIQDWGATCMSIPLAWLASDPST*ACQSAG
Trigger: CCCAGCACTTTGGCAGGCCAAGGTGGAAGGATCACT...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTCTGGGCCTCAGGTACTaGCTCCATGTGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGALGLRY*LHVGLA
Trigger: GGCCAGCCCCACATGGAGCAAGTACCTGAGGCCCAG...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCAACAGCGGAACAGATTTaGGCAGGCAGCTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: LIQDWGATCMSIPLAWLATAEQI*AGSCHS
Trigger: AGAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGT...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTAGCCTGGCTGGCACACCCAGACCCCGTGTaGGCATATGTCACTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LIQDWGATCMSIPLAWLAHPDPV*AYVTSD
Trigger: GTCAGAAGTGACATATGCCAACACGGGGTCTGGGTG...TGCCAGCCAGGCTAGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGTGCTCCACCTTCCCCTaGGGTATGACCAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRCSTFP*GMTKAG
Trigger: TCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCA...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCTCCCAGCTTGTGGCGTaGACAGCGGACACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLSQLVA*TADTLA
Trigger: GGCCAGGGTGTCCGCTGTCAACGCCACAAGCTGGGA...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAGGAGTCGCCAAAGCGTaGGCCCCACTAGGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQGVAKA*APLGVL
Trigger: TAGCACCCCTAGTGGGGCCAACGCTTTGGCGACTCC...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 90 bp CTGACATCTTCGGTAGTGGAACTGGCAGATCAGAACTTTATGAGATaGCCATGTAGGTGGGGCCCAATGGACAGTGGCCTCCAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: LTSSVVELADQNFMR*PCRWGPMDSGLQGV
Trigger: GACCCCCTGGAGGCCACTGTCCATTGGGCCCCACCTACATGGCCATCTCATAAAGTTCTGATCTGCCAGTTCCACTACCGAAGATGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGATACCCACACATCTTTaGGAGCAGAAGGCGGTGTCT +
Preference number: 5 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRIPTHL*EQKAVS
Trigger: AGACACCGCCTTCTGCTCCAAAAGATGTGTGGGTAT...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCGGAAGCCGGACCCAGTaGAGTTTCTCCAGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGGSRTQ*SFSRGS
Trigger: GGACCCCCTGGAGAAACTCAACTGGGTCCGGCTTCC...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCGGAAGCCGGACCCAGTaGAGTTTCTCCAGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLGSRTQ*SFSRGS
Trigger: GGACCCCCTGGAGAAACTCAACTGGGTCCGGCTTCC...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCCCCTGGAGGGGCATCTaGGAGTCGCCAAAGCGTTGG +
Preference number: 5 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLPWRGI*ESPKRW
Trigger: CCAACGCTTTGGCGACTCCAAGATGCCCCTCCAGGG...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TCCATCAAGAGGGCTAATCCAGGACTGGGGTGCAACCTGCATGAGCATCCCTCTTGCTCCACCTTCCCCTaGGGTATGACCAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SIKRANPGLGCNLHEHPSCSTFP*GMTKAG
Trigger: TCCAGCTTTGGTCATACCCAAGGGGAAGGTGGAGCA...AGAGGGATGCTCATGCAGGTTGCACCCCAGTCCTGGATTAGCCCTCTTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 90 bp GGCTCAGGCCACACCCCAACAGGAACAAGCCCCACAAGAATAGGATaGCCGGCAGAACTTTCCACCTCAGGGTGTTATCTGGTAGATGAA +
Preference number: 5 (lower is better)
Translates to: GSGHTPTGTSPTRIG*PAELSTSGCYLVDE
Trigger: TTCATCTACCAGATAACACCCTGAGGTGGAAAGTTCTGCCGGGCATCCTATTCTTGTGGGGCTTGTTCCTGTTGGGGTGTGGCCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 90 bp CCTCTTCTTTCTCCATCCGGCAGCGGCCATACACTTTGTAGCCAGTaGCTAGCTCCAAATCTTGGATCTCAACAGGGGTCAGGGGTATGG +
Preference number: 5 (lower is better)
Translates to: PLLSPSGSGHTLCSQ*LAPNLGSQQGSGVW
Trigger: CCATACCCCTGACCCCTGTTGAGATCCAAGATTTGGAGCTAGCCACTGGCTACAAAGTGTATGGCCGCTGCCGGATGGAGAAAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TGCTCCACCTTCCATCCGTGTCTTCCCCATGGGGGCCAAGCCCTTCTCTATAGGACAGTCTGGGTTTTGTaGGAACGGTACTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: CSTFHPCLPHGGQALLYRTVWVL*ERYFWL
Trigger: GAGCCAAAAGTACCGTTCCAACAAAACCCAGACTGT...CCTATAGAGAAGGGCTTGGCCCCCATGGGGAAGACACGGATGGAAGGTGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CCCACCCAGACCCCGTGTTGGCATATGTCACTTCTGACCACATTCTGTTGTCAAACAGCGGAACAGATTTaGGCAGGCAGCTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: PTQTPCWHMSLLTTFCCQTAEQI*AGSCHS
Trigger: AGAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGT...TTGACAACAGAATGTGGTCAGAAGTGACATATGCCAACACGGGGTCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp ACTGTGCTGGGGTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCCACCCAGACCCCGTGTaGGCATATGTCACTTCTGAC +
Preference number: 5 (lower is better)
Translates to: TVLGSKFSSVTAEQILAGHPDPV*AYVTSD
Trigger: GTCAGAAGTGACATATGCCAACACGGGGTCTGGGTG...GCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGACCCCAGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp CCACATTCTGTTGTCAAGAACTCAGTCCATGCTGCACCTGGATGCAAGGGAGCTATACCCACACATCTTTaGGAGCAGAAGGCGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PHSVVKNSVHAAPGCKGAIPTHL*EQKAVS
Trigger: AGACACCGCCTTCTGCTCCAAAAGATGTGTGGGTAT...AGCTCCCTTGCATCCAGGTGCAGCATGGACTGAGTTCTTGACAACAGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCGCCACAGTCTGGGTTTaGTTGGAACGGTACTTTTGG +
Preference number: 5 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLATVWV*LERYFW
Trigger: CCAAAAGTACCGTTCCAACAAAACCCAGACTGTGGC...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCACAGTCTGGGTTTTGTaGGAACGGTACTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLTVWVL*ERYFWL
Trigger: GAGCCAAAAGTACCGTTCCAACAAAACCCAGACTGT...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp ACTCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCACCCCAGACAAGGAGTTaGTCAGACATGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TLNFMYFPLLHLPSVSSPPQTRS*SDMVSC
Trigger: ACAGCTCACCATGTCTGACAAACTCCTTGTCTGGGG...TGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp GTCCAAATTCAGTTCTGTTACAGCGGAACAGATTTTGGCAGGCAGCTGCCACTCTTCATGTATTTTCCTTaGCTCCACCTTCCATCCGTG +
Preference number: 5 (lower is better)
Translates to: VQIQFCYSGTDFGRQLPLFMYFP*LHLPSV
Trigger: CACGGATGGAAGGTGGAGCAAAGGAAAATACATGAA...GAGTGGCAGCTGCCTGCCAAAATCTGTTCCGCTGTAACAGAACTGAATTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGGTGACACTCTGTGTGTaGCCACTCACATTCATGCAG +
Preference number: 5 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMVTLCV*PLTFMQ
Trigger: CTGCATGAATGTGAGTGGCAACACACAGAGTGTCAC...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS-3UTR CAA 90 bp TCTCAATTTCATGTATTTTCCTTTGCTCCACCTTCCATCCGTGTCTTCCCCATGTTCATGTATTTTCCTTaGCTCCACCTTCCATCCGTG +
Preference number: 5 (lower is better)
Translates to: SQFHVFSFAPPSIRVFPMFMYFP*LHLPSV
Trigger: CACGGATGGAAGGTGGAGCAAAGGAAAATACATGAA...CATGGGGAAGACACGGATGGAAGGTGGAGCAAAGGAAAATACATGAAATTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp TGGCGTCCCTCGGGAGCCCCGAGTCCGGCCCAGCCTTaGCGGGTCCGCGCGGCCGCGCTGCTCCTCTTCGAG +
Preference number: 6 (lower is better)
Translates to: WRPSGAPSPAQP*RVRAAALLLFE
Trigger: CTCGAAGAGGAGCAGCGCGGCCGCGCGGACCCGGCAAGGCTGGGCCGGACTCGGGGCTCCCGAGGGACGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 90 bp CCTCCCCGCATGGCGTCCCTCGGGAGCCCCGAGTCCGGCCCAGCCTaGCCGGGTCCGCGCGGCCGCGCTGCTCCTCTTCGAGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: PPRMASLGSPESGPA*PGPRGRAAPLRALG
Trigger: ACCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGACCCGGCAAGGCTGGGCCGGACTCGGGGCTCCCGAGGGACGCCATGCGGGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp GTCCGGCCCAGCCTTGCCGGGTCCGCGCGGCCGCGCTaGTCCTCTTCGAGCTCTGGGTACAGCGCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: VRPSLAGSARPR*SSSSSGYSARG
Trigger: GCCTCGGGCGCTGTACCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGACCCGGCAAGGCTGGGCCGGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 72 bp ATGGCGTCCCTCGGGAGCCCCGAGTCCGGCCCAGCCTaGCCGGGTCCGCGCGGCCGCGCTGCTCCTCTTCGA +
Preference number: 6 (lower is better)
Translates to: MASLGSPESGPA*PGPRGRAAPLR
Trigger: TCGAAGAGGAGCAGCGCGGCCGCGCGGACCCGGCAAGGCTGGGCCGGACTCGGGGCTCCCGAGGGACGCCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 72 bp CGGGTCCGCGCGGCCGCGCTGCTCCTCTTCGAGCTCTaGGTACAGCGCCCGAGGCGGCAACGGGAAGCCGAA +
Preference number: 6 (lower is better)
Translates to: RVRAAALLLFEL*VQRPRRQREAE
Trigger: TTCGGCTTCCCGTTGCCGCCTCGGGCGCTGTACCCAGAGCTCGAAGAGGAGCAGCGCGGCCGCGCGGACCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 72 bp TGCAGTGGCCCGGCGCTGCCCTGGGGACGCGTCCGCTaGAAAAGCACCCACAACAGAGGCAGCAGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: CSGPALPWGRVR*KSTHNRGSSAS
Trigger: GCTGGCGCTGCTGCCTCTGTTGTGGGTGCTTTTCCAGCGGACGCGTCCCCAGGGCAGCGCCGGGCCACTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 72 bp GGTGTAGTGGGTGAGGTGGCCTCGAAGCTGGTGCCTTaGGACCTCTCCCCACGCTATGGCGGGGGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: GVVGEVASKLVP*DLSPRYGGGPW
Trigger: CCAGGGACCCCCGCCATAGCGTGGGGAGAGGTCCCAAGGCACCAGCTTCGAGGCCACCTCACCCACTACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp CCCAGAAGGCCCAGCTCCTCAGGTGTGGGCAGGAAGTaGTTCTCATACCCAGAGTCAAGCGGGGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: PRRPSSSGVGRK*FSYPESSGAVA
Trigger: GGCCACCGCCCCGCTTGACTCTGGGTATGAGAAGCACTTCCTGCCCACACCTGAGGAGCTGGGCCTTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp TCCACTACATGCTCCAGTGGTTCCCCAGGCCCCGGTTaGCAGGTCACCAGTAGCTCCGTGCTCCCAGCGATG +
Preference number: 6 (lower is better)
Translates to: STTCSSGSPGPG*QVTSSSVLPAM
Trigger: CATCGCTGGGAGCACGGAGCTACTGGTGACCTGGCAACCGGGGCCTGGGGAACCACTGGAGCATGTAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 90 bp GGGGGCCAGAGAGGCTGGCCTGCCTTAGTGCCCCAGACAAGGAGTTaGTCAGACATGGTGAGCTGTTCCCGAGGAATGGCCACCCAGCTC +
Preference number: 6 (lower is better)
Translates to: GGQRGWPALVPQTRS*SDMVSCSRGMATQL
Trigger: GAGCTGGGTGGCCATTCCTCGGGAACAGCTCACCATGTCTGACAAACTCCTTGTCTGGGGCACTAAGGCAGGCCAGCCTCTCTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp GATGGGACCAGGAGGGCCCTGTCCAGCGATGGTAGATaGTGTCACCCACAGCTCACAGGGACCCCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: DGTRRALSSDGR*CHPQLTGTPRK
Trigger: CTTCCTTGGGGTCCCTGTGAGCTGTGGGTGACAGCATCTACCATCGCTGGACAGGGCCCTCCTGGTCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 90 bp AAGCAGACCAAAGAGAGGTTGGTGAGAGGCTCCCAGCTTGTGGCGTaGACAGCGGACACCCTGGCCCACTCCGCCCCACTGGGAATTAGG +
Preference number: 6 (lower is better)
Translates to: KQTKERLVRGSQLVA*TADTLAHSAPLGIR
Trigger: CCTAATTCCCAGTGGGGCGGAGTGGGCCAGGGTGTCCGCTGTCAACGCCACAAGCTGGGAGCCTCTCACCAACCTCTCTTTGGTCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp CTGTTCCCGAGGAATGGCCACCCAGCTCCGTCCGGCTaGCACTGCCACAGTCTGGGTTTTGTTGGAACGGTA +
Preference number: 6 (lower is better)
Translates to: LFPRNGHPAPSG*HCHSLGFVGTV
Trigger: TACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGGGTGGCCATTCCTCGGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 72 bp GCCACCCAGCTCCGTCCGGCTGCCACTGCCACAGTCTaGGTTTTGTTGGAACGGTACTTTTGGCTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ATQLRPAATATV*VLLERYFWLWR
Trigger: CCTCCAGAGCCAAAAGTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp CCGAGGAATGGCCACCCAGCTCCGTCCGGCTGCCACTaGCACAGTCTGGGTTTTGTTGGAACGGTACTTTTG +
Preference number: 6 (lower is better)
Translates to: PRNGHPAPSGCH*HSLGFVGTVLL
Trigger: CAAAAGTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTGGGTGGCCATTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 72 bp GGTACTTGCTCCATGTGGGGCTGGCCTGAACTGCTGTaGGCAGGATCAGGAACTTTCTCCCAGACCCAGCGG +
Preference number: 6 (lower is better)
Translates to: GTCSMWGWPELL*AGSGTFSQTQR
Trigger: CCGCTGGGTCTGGGAGAAAGTTCCTGATCCTGCCAACAGCAGTTCAGGCCAGCCCCACATGGAGCAAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp CACATTCATGCAGACGGAGGGGCTGGTTCCACTCTGTaGACACAAGGTGTAGTGGGTGAGGTGGCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: HIHADGGAGSTL*TQGVVGEVASK
Trigger: CTTCGAGGCCACCTCACCCACTACACCTTGTGTGCACAGAGTGGAACCAGCCCCTCCGTCTGCATGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp CCTCAGGTACTTGCTCCATGTGGGGCTGGCCTGAACTaGTGTTGGCAGGATCAGGAACTTTCTCCCAGACCC +
Preference number: 6 (lower is better)
Translates to: PQVLAPCGAGLN*CWQDQELSPRP
Trigger: GGGTCTGGGAGAAAGTTCCTGATCCTGCCAACAGCAGTTCAGGCCAGCCCCACATGGAGCAAGTACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 72 bp AGAGGCTGGCCTGCCTTAGTGCCCCAGACAAGGAGTTaGTCAGACATGGTGAGCTGTTCCCGAGGAATGGCC +
Preference number: 6 (lower is better)
Translates to: RGWPALVPQTRS*SDMVSCSRGMA
Trigger: GGCCATTCCTCGGGAACAGCTCACCATGTCTGACAAACTCCTTGTCTGGGGCACTAAGGCAGGCCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CAA 72 bp CAGCTCCGTCCGGCTGCCACTGCCACAGTCTGGGTTTaGTTGGAACGGTACTTTTGGCTCTGGAGGTGTAAC +
Preference number: 6 (lower is better)
Translates to: QLRPAATATVWV*LERYFWLWRCN
Trigger: GTTACACCTCCAGAGCCAAAAGTACCGTTCCAACAAAACCCAGACTGTGGCAGTGGCAGCCGGACGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS GCA 72 bp CACACCCCAACAGGAACAAGCCCCACAAGAATAGGATaGCCGGCAGAACTTTCCACCTCAGGGTGTTATCTG +
Preference number: 6 (lower is better)
Translates to: HTPTGTSPTRIG*PAELSTSGCYL
Trigger: CAGATAACACCCTGAGGTGGAAAGTTCTGCCGGGCATCCTATTCTTGTGGGGCTTGTTCCTGTTGGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 72 bp TCGGTAGTGGAACTGGCAGATCAGAACTTTATGAGATaGCCATGTAGGTGGGGCCCAATGGACAGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SVVELADQNFMR*PCRWGPMDSGL
Trigger: GAGGCCACTGTCCATTGGGCCCCACCTACATGGCCATCTCATAAAGTTCTGATCTGCCAGTTCCACTACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1
CDS CCA 72 bp TCTCCATCCGGCAGCGGCCATACACTTTGTAGCCAGTaGCTAGCTCCAAATCTTGGATCTCAACAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: SPSGSGHTLCSQ*LAPNLGSQQGS
Trigger: TGACCCCTGTTGAGATCCAAGATTTGGAGCTAGCCACTGGCTACAAAGTGTATGGCCGCTGCCGGATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263379.4
ENST00000672064.1