Pregenerated sensors for IL27 (Homo sapiens)
Ensembl gene IDs: ENSG00000197272Ensembl transcript IDs: ENST00000356897.1, ENST00000568075.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AGTTACTGGGTAGAGCCTGGGGCAGGGGGCTGGAAGAGCCCTCCCTaGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTC | + |
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Preference number: 2 (lower is better) Translates to: SYWVEPGAGGWKSPP*SKADDAKAALMPRL Trigger: GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTGCCCCAGGCTCTACCCAGTAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| 3UTR TCA 72 bp | CTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTaGTGCCAAGACTCCAGTCCTAAAGTTCTAAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LPCPRLMMRRLP*CQDSSPKVLKG Trigger: ACCCTTTAGAACTTTAGGACTGGAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCAGGTCGCCTGCCGTCTaGCCCATGGCGGGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLRSPAV*PMAGPS Trigger: GCTGGGCCCCGCCATGGGCCAGACGGCAGGCGACCT...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCGATTCCGCAAAGCGGTaGGCCTGGCCCCGAACCTCG | + |
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Preference number: 4 (lower is better) Translates to: QGAGRALPCPRLMMRRLPDSAKR*AWPRTS Trigger: CGAGGTTCGGGGCCAGGCCCACCGCTTTGCGGAATC...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | GGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGCCTCCTCCGGGAGGTTaGATCCTGCAGCCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: GGWKSPPLSKADDAKAALPPPGG*ILQPAP Trigger: AGGTGCTGGCTGCAGGATTCAACCTCCCGGAGGAGG...CAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR GCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCCCAGCCAAGGTCGCCTaGCGTCTGGCCCATGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLPAKVA*RLAHGG Trigger: CCCGCCATGGGCCAGACGGCAGGCGACCTTGGCTGG...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCGCATCCTCTCCATGTTaGTCCAGCGGCCCTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QGAGRALPCPRLMMRRLPASSPC*SSGPGS Trigger: GGACCCAGGGCCGCTGGACCAACATGGAGAGGATGC...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | GGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGGAAGCGTGGTGGAGATaGAGCAGAGACGCTCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GGWKSPPLSKADDAKAALEAWWR*SRDAPG Trigger: ACCCGGAGCGTCTCTGCTTCATCTCCACCACGCTTC...CAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR GCA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCAAGGGCCAGACTGAGTaGCCAGCCTTGGACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGAGRALPCPRLMMRRLPKGQTE*PALDSS Trigger: GCTGCTGTCCAAGGCTGGGCACTCAGTCTGGCCCTT...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | GGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGAGGGCATGGAAGGGCTaGAGCGTGGTGGAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GGWKSPPLSKADDAKAALRAWKG*SVVEMK Trigger: CTTCATCTCCACCACGCTTCAGCCCTTCCATGCCCT...CAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCCCCCAAGGGCCAGACTaGGTGCCCAGCCTTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLPQGPD*VPSLGQ Trigger: CTGTCCAAGGCTGGGCACTCAGTCTGGCCCTTGGGG...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR GCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCACCTGGAAGCGGAGGTaGCGCTGCAGATCGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLTWKRR*RCRSRR Trigger: CCTCCGCGATCTGCAGCGGCACCTCCGCTTCCAGGT...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGAGCAAAGCGGTGGGCCTaGCCCCGAACCTCGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KSPPLSKADDAKAALMPRAKRWA*PRTSES Trigger: GCTCTCCGAGGTTCGGGGCCAGGCCCACCGCTTTGC...TCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACCCAGCATGGGGGCTTaGCCCGAGGAGGACCATCGG | + |
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Preference number: 4 (lower is better) Translates to: KSPPLSKADDAKAALMPRPSMGA*PEEDHR Trigger: CCGATGGTCCTCCTCGGGCCAAGCCCCCATGCTGGG...TCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR GCA 90 bp | AAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGAAAGCGGAGGTGCCGCTaGAGATCGCGGAGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KSPPLSKADDAKAALMPRKRRCR*RSRRSS Trigger: GCTGGACCTCCGCGATCTGCAGCGGCACCTCCGCTT...TCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | TGGATGAGAGTGCTTTATTGGGCACCCAGCATGGGGGCTTGGCCCGAGGAGGACGCCACCGATCAGGGCTaGGGGCTCAATGTTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: WMRVLYWAPSMGAWPEEDATDQG*GLNVGN Trigger: GTTCCCAACATTGAGCCCCCAGCCCTGATCGGTGGC...GTCCTCCTCGGGCCAAGCCCCCATGCTGGGTGCCCAATAAAGCACTCTCATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGAATTGGGCACCCAGCATaGGGGCTTGGCCCGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KSPPLSKADDAKAALMPRIGHPA*GLGPRR Trigger: CCTCCTCGGGCCAAGCCCCCATGCTGGGTGCCCAAT...TCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | TGGATGAGAGTGCTTTATTGGGCACCCAGCATGGGGGCTTGGCCCGAGGAGGACTTCACTCCTGGCAGGTaGGATTCCGCAAAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WMRVLYWAPSMGAWPEEDFTPGR*DSAKRW Trigger: CCACCGCTTTGCGGAATCTCACCTGCCAGGAGTGAA...GTCCTCCTCGGGCCAAGCCCCCATGCTGGGTGCCCAATAAAGCACTCTCATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCAGGCGGCGCCAGGCCTaGAAGGTCAGGGAAACATCA | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLRRRQA*KVRETS Trigger: TGATGTTTCCCTGACCTTCCAGGCCTGGCGCCGCCT...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | GGCTTGGCCCGAGGAGGACCATCGGGCCCCAAGACAATAAATAAACCATCATCTCCTGCAGCCAGCACCTaGAAGCGGAGGTGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GLARGGPSGPKTINKPSSPAAST*KRRCRC Trigger: GCAGCGGCACCTCCGCTTCCAGGTGCTGGCTGCAGG...AGATGATGGTTTATTTATTGTCTTGGGGCCCGATGGTCCTCCTCGGGCCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCCTGAGTGCCCAGCCTTaGACAGCAGCAGCAACTCCC | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLLSAQP*TAAATP Trigger: GGGAGTTGCTGCTGCTGTCCAAGGCTGGGCACTCAG...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCATGAGAGTGCTTTATTaGGCACCCAGCATGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QGAGRALPCPRLMMRRLPMRVLY*APSMGA Trigger: AGCCCCCATGCTGGGTGCCCAATAAAGCACTCTCAT...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| 3UTR CAA 72 bp | GATGAGAGTGCTTTATTGGGCACCCAGCATGGGGGCTaGGCCCGAGGAGGACCATCGGGCCCCAAGACAATA | + |
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Preference number: 4 (lower is better) Translates to: DESALLGTQHGG*ARGGPSGPKTI Trigger: TATTGTCTTGGGGCCCGATGGTCCTCCTCGGGCCAAGCCCCCATGCTGGGTGCCCAATAAAGCACTCTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | GGCTTGGCCCGAGGAGGACCATCGGGCCCCAAGACAATAAATAAACCATCATCTGAAGCAGCAACAGGCTaGGCCGCCAGCCAAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GLARGGPSGPKTINKPSSEAATG*AASQGR Trigger: GCGACCTTGGCTGGCGGCTCAGCCTGTTGCTGCTTC...AGATGATGGTTTATTTATTGTCTTGGGGCCCGATGGTCCTCCTCGGGCCAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR GCA 90 bp | TGGATGAGAGTGCTTTATTGGGCACCCAGCATGGGGGCTTGGCCCGAGGAGGACAGCTTCCTGGCGAGATaGAGGCTGACTGTGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: WMRVLYWAPSMGAWPEEDSFLAR*RLTVNS Trigger: GGAGTTCACAGTCAGCCTGCATCTCGCCAGGAAGCT...GTCCTCCTCGGGCCAAGCCCCCATGCTGGGTGCCCAATAAAGCACTCTCATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCCAAGAAATAAATAGCTaGCGAGGACCAGAGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QGAGRALPCPRLMMRRLPQEINS*RGPEGL Trigger: AAGCCCCTCTGGTCCTCGCCAGCTATTTATTTCTTG...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | GGCTTGGCCCGAGGAGGACCATCGGGCCCCAAGACAATAAATAAACCATCATCTCCCCAGACACCAGCTTaGACCAGGAGCAAGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GLARGGPSGPKTINKPSSPQTPA*TRSKGS Trigger: GCTTCCCTTGCTCCTGGTTCAAGCTGGTGTCTGGGG...AGATGATGGTTTATTTATTGTCTTGGGGCCCGATGGTCCTCCTCGGGCCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR GCA 90 bp | GGCTTGGCCCGAGGAGGACCATCGGGCCCCAAGACAATAAATAAACCATCATCTCGGGAGGTTGAATCCTaGAGCCAGCACCTGGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: GLARGGPSGPKTINKPSSREVES*SQHLEA Trigger: CGCTTCCAGGTGCTGGCTGCAGGATTCAACCTCCCG...AGATGATGGTTTATTTATTGTCTTGGGGCCCGATGGTCCTCCTCGGGCCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | GGCTTGGCCCGAGGAGGACCATCGGGCCCCAAGACAATAAATAAACCATCATCTCTGGGGGCTCAATGTTaGGAACCCCAAGGGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: GLARGGPSGPKTINKPSSLGAQC*EPQGPD Trigger: GTCTGGCCCTTGGGGTTCCCAACATTGAGCCCCCAG...AGATGATGGTTTATTTATTGTCTTGGGGCCCGATGGTCCTCCTCGGGCCAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCGTACAGGTTCACTCCTaGCAGGTGAGATTCCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SPPLSKADDAKAALMPRLVQVHS*QVRFRK Trigger: TTTGCGGAATCTCACCTGCCAGGAGTGAACCTGTAC...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AATATCCAAGAAATAAATAGCTGGCGAGGACCAGAGGGGCTTTCAGTTACTGGGGGAGGTCCAGCCTCATaGCCCACAGCTGCATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: NIQEINSWRGPEGLSVTGGGPAS*PTAASS Trigger: AGAGGATGCAGCTGTGGGCCATGAGGCTGGACCTCC...CCCAGTAACTGAAAGCCCCTCTGGTCCTCGCCAGCTATTTATTTCTTGGATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AATATCCAAGAAATAAATAGCTGGCGAGGACCAGAGGGGCTTTCAGTTACTGGGTTACTGGGTAGAGCCTaGGGCAGGGGGCTGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: NIQEINSWRGPEGLSVTGLLGRA*GRGLEE Trigger: CTCTTCCAGCCCCCTGCCCCAGGCTCTACCCAGTAA...CCCAGTAACTGAAAGCCCCTCTGGTCCTCGCCAGCTATTTATTTCTTGGATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CCA 90 bp | AATATCCAAGAAATAAATAGCTGGCGAGGACCAGAGGGGCTTTCAGTTACTGGGGGGGCTTTCAGTTACTaGGTAGAGCCTGGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NIQEINSWRGPEGLSVTGGAFSY*VEPGAG Trigger: CCCTGCCCCAGGCTCTACCCAGTAACTGAAAGCCCC...CCCAGTAACTGAAAGCCCCTCTGGTCCTCGCCAGCTATTTATTTCTTGGATATT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR TCA 90 bp | AATATCCAAGAAATAAATAGCTGGCGAGGACCAGAGGGGCTTTCAGTTACTGGGATGCGAAGGCTGCCCTaGTGCCAAGACTCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: NIQEINSWRGPEGLSVTGMRRLP*CQDSSP Trigger: AGGACTGGAGTCTTGGCATCAGGGCAGCCTTCGCAT...CCCAGTAACTGAAAGCCCCTCTGGTCCTCGCCAGCTATTTATTTCTTGGATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS TCA 90 bp | CCAGCCCTCCCAGCAGGGCATGGAAGGGCTGAAGCGTGGTGGAGATaGAGCAGAGACGCTCCGGGTCAGAGAGGCGGCGCCAGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PALPAGHGRAEAWWR*SRDAPGQRGGARPG Trigger: TCCAGGCCTGGCGCCGCCTCTCTGACCCGGAGCGTCTCTGCTTCATCTCCACCACGCTTCAGCCCTTCCATGCCCTGCTGGGAGGGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS GCA 90 bp | CGGTGGGCCTGGCCCCGAACCTCGGAGAGCAGCTTCCTGGCGAGATaGAGGCTGACTGTGAACTCCCTCCGCAGCTCCTGCAGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RWAWPRTSESSFLAR*RLTVNSLRSSCRLS Trigger: GCTGAGCCTGCAGGAGCTGCGGAGGGAGTTCACAGTCAGCCTGCATCTCGCCAGGAAGCTGCTCTCCGAGGTTCGGGGCCAGGCCCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS GCA 90 bp | AGGTGCCGCTGCAGATCGCGGAGGTCCAGCCTCATGGCCCACAGCTaGATCCTCTCCATGTTGGTCCAGCGGCCCTGGGTCCCCAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RCRCRSRRSSLMAHS*ILSMLVQRPWVPSP Trigger: AGGGCTGGGGACCCAGGGCCGCTGGACCAACATGGAGAGGATGCAGCTGTGGGCCATGAGGCTGGACCTCCGCGATCTGCAGCGGCACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS CCA 90 bp | CCTGGAAGCGGAGGTGCCGCTGCAGATCGCGGAGGTCCAGCCTCATaGCCCACAGCTGCATCCTCTCCATGTTGGTCCAGCGGCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PGSGGAAADRGGPAS*PTAASSPCWSSGPG Trigger: CCCAGGGCCGCTGGACCAACATGGAGAGGATGCAGCTGTGGGCCATGAGGCTGGACCTCCGCGATCTGCAGCGGCACCTCCGCTTCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS-3UTR CAA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTCCTCCTCCGGGAGGTaGAATCCTGCAGCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: QGAGRALPCPRLMMRRLPSSSGR*NPAAST Trigger: GGTGCTGGCTGCAGGATTCAACCTCCCGGAGGAGGA...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CAA 90 bp | CAGGGGGCTGGAAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCGCTGGGGGCTCAATGTaGGGAACCCCAAGGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QGAGRALPCPRLMMRRLPAGGSM*GTPRAR Trigger: TCTGGCCCTTGGGGTTCCCAACATTGAGCCCCCAGC...GGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCAGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CAA 90 bp | AAGAGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGAACCCAGCATGGGGGCTaGGCCCGAGGAGGACCATCG | + |
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Preference number: 5 (lower is better) Translates to: KSPPLSKADDAKAALMPRTQHGG*ARGGPS Trigger: CGATGGTCCTCCTCGGGCCAAGCCCCCATGCTGGGT...TCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CAA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCTGCATCCTCTCCATGTaGGTCCAGCGGCCCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SPPLSKADDAKAALMPRLCILSM*VQRPWV Trigger: GACCCAGGGCCGCTGGACCAACATGGAGAGGATGCA...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CAA 90 bp | TGGATGAGAGTGCTTTATTGGGCACCCAGCATGGGGGCTTGGCCCGAGGAGGACTGGAAGAGCCCTCCCTaGTCCAAGGCTGATGATGCG | + |
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Preference number: 5 (lower is better) Translates to: WMRVLYWAPSMGAWPEEDWKSPP*SKADDA Trigger: CGCATCATCAGCCTTGGACAAGGGAGGGCTCTTCCA...GTCCTCCTCGGGCCAAGCCCCCATGCTGGGTGCCCAATAAAGCACTCTCATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS GCA 90 bp | CCAAGTCCTGTTACGGCTCTGACCCTGTGGGGCACTCCGTGGGCTTaGCTGGGAATCCTGAGCTCAGTGACAGAAGTTGGAGGCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSPVTALTLWGTPWA*LGILSSVTEVGGFR Trigger: TCTGAAGCCTCCAACTTCTGTCACTGAGCTCAGGATTCCCAGGCAAGCCCACGGAGTGCCCCACAGGGTCAGAGCCGTAACAGGACTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568075.1 |
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| CDS-3UTR CAA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCTCCCCAGACACCAGCTaGAACCAGGAGCAAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SPPLSKADDAKAALMPRLSPDTS*NQEQGK Trigger: CTTCCCTTGCTCCTGGTTCAAGCTGGTGTCTGGGGA...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS-3UTR CAA 90 bp | AGCCCTCCCTTGTCCAAGGCTGATGATGCGAAGGCTGCCCTGATGCCAAGACTCGATGAGAGTGCTTTATaGGGCACCCAGCATGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SPPLSKADDAKAALMPRLDESAL*GTQHGG Trigger: GCCCCCATGCTGGGTGCCCAATAAAGCACTCTCATC...GAGTCTTGGCATCAGGGCAGCCTTCGCATCATCAGCCTTGGACAAGGGAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS CCA 72 bp | CACAGCTGCATCCTCTCCATGTTGGTCCAGCGGCCCTaGGTCCCCAGCCCTCCCAGCAGGGCATGGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: HSCILSMLVQRP*VPSPPSRAWKG Trigger: GCCCTTCCATGCCCTGCTGGGAGGGCTGGGGACCCAGGGCCGCTGGACCAACATGGAGAGGATGCAGCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS TCA 72 bp | CCAGCAGGGCATGGAAGGGCTGAAGCGTGGTGGAGATaGAGCAGAGACGCTCCGGGTCAGAGAGGCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PAGHGRAEAWWR*SRDAPGQRGGA Trigger: GGCGCCGCCTCTCTGACCCGGAGCGTCTCTGCTTCATCTCCACCACGCTTCAGCCCTTCCATGCCCTGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS GCA 72 bp | AATCCTGCAGCCAGCACCTGGAAGCGGAGGTGCCGCTaGAGATCGCGGAGGTCCAGCCTCATGGCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: NPAASTWKRRCR*RSRRSSLMAHS Trigger: GCTGTGGGCCATGAGGCTGGACCTCCGCGATCTGCAGCGGCACCTCCGCTTCCAGGTGCTGGCTGCAGGATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS TCA 72 bp | CCTCCTCCTCTTCCTCCTCCTCCTCCTCCGGGAGGTTaGATCCTGCAGCCAGCACCTGGAAGCGGAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PPPLPPPPPPGG*ILQPAPGSGGA Trigger: GGCACCTCCGCTTCCAGGTGCTGGCTGCAGGATTCAACCTCCCGGAGGAGGAGGAGGAGGAAGAGGAGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS GCA 72 bp | TGGCCCCGAACCTCGGAGAGCAGCTTCCTGGCGAGATaGAGGCTGACTGTGAACTCCCTCCGCAGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: WPRTSESSFLAR*RLTVNSLRSSC Trigger: GCAGGAGCTGCGGAGGGAGTTCACAGTCAGCCTGCATCTCGCCAGGAAGCTGCTCTCCGAGGTTCGGGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS CAA 72 bp | TCCTCCTCCTCTTCCTCCTCCTCCTCCTCCGGGAGGTaGAATCCTGCAGCCAGCACCTGGAAGCGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSSSGR*NPAASTWKRRC Trigger: GCACCTCCGCTTCCAGGTGCTGGCTGCAGGATTCAACCTCCCGGAGGAGGAGGAGGAGGAAGAGGAGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356897.1 |
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| CDS TCA 72 bp | CTCCCTGGGGGCCTTGGGAATCCCCAGACACCAGCTTaGACCAGGAGCAAGGGAAGCAGCAACAGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LPGGLGNPQTPA*TRSKGSSNRLS Trigger: GCTCAGCCTGTTGCTGCTTCCCTTGCTCCTGGTTCAAGCTGGTGTCTGGGGATTCCCAAGGCCCCCAGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356897.1 ENST00000568075.1 |
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| CDS CAA 72 bp | TGTTACGGCTCTGACCCTGTGGGGCACTCCGTGGGCTaGCCTGGGAATCCTGAGCTCAGTGACAGAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CYGSDPVGHSVG*PGNPELSDRSW Trigger: CCAACTTCTGTCACTGAGCTCAGGATTCCCAGGCAAGCCCACGGAGTGCCCCACAGGGTCAGAGCCGTAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568075.1 |
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| CDS CCA 72 bp | GGTTATTTTCCAAGTCCTGTTACGGCTCTGACCCTGTaGGGCACTCCGTGGGCTTGCCTGGGAATCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GYFPSPVTALTL*GTPWACLGILS Trigger: GCTCAGGATTCCCAGGCAAGCCCACGGAGTGCCCCACAGGGTCAGAGCCGTAACAGGACTTGGAAAATAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568075.1 |
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