RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL24 (Homo sapiens)

Ensembl gene IDs: ENSG00000162892

Ensembl transcript IDs: ENST00000294984.7, ENST00000367093.3, ENST00000367095.7, ENST00000391929.7, ENST00000480741.1, ENST00000491169.1, ENST00000611909.4

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGTGCCAGGGGGAGGGAGGTCCTGGTC +
Preference number: 1 (lower is better)
Translates to: REVSSEQHRKGDCLK*HREQTSARGREVLV
Trigger: GACCAGGACCTCCCTCCCCCTGGCACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR TCA 90 bp AAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAACCAGTGCCAGGGGGAGGGAGGTCC +
Preference number: 1 (lower is better)
Translates to: KGVKCPVNSIGRETV*NDTGNKPVPGGGRS
Trigger: GGACCTCCCTCCCCCTGGCACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR TCA 90 bp TTCCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTaGTATCCCACCTCCTACATATACTCTTTGCCTAGGTTTTTGGAA +
Preference number: 1 (lower is better)
Translates to: FLGGHGSAIALMSWK*YPTSYIYSLPRFLE
Trigger: TTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR GCA 90 bp TTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCAGGTaGAATGTCACCATCAGCAAGGTCAGCTTGACACTCAAGTGGAAG +
Preference number: 1 (lower is better)
Translates to: FISRECHHRLDSTSR*NVTISKVSLTLKWK
Trigger: CTTCCACTTGAGTGTCAAGCTGACCTTGCTGATGGTGACATTGCACCTGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CCA 90 bp CTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTaGATAGTACATCCAGGTGCAATGTCACCATCAGCAAGGTCAGCT +
Preference number: 1 (lower is better)
Translates to: LELCCLLLAGNVITD*IVHPGAMSPSARSA
Trigger: AGCTGACCTTGCTGATGGTGACATTGCACCTGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR TCA 90 bp TCACTGGGCATTCATCCAGAAATAGAGAAGAAAGTCTGCCAGACTTaGGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTG +
Preference number: 1 (lower is better)
Translates to: SLGIHPEIEKKVCQT*VMLSFISRECHHRL
Trigger: CAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCTGGCAGACTTTCTTCTCTATTTCTGGATGAATGCCCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR GCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTaGCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTT +
Preference number: 1 (lower is better)
Translates to: HLCHGSDIPPPTYTL*LGFWNKVIVRHCIF
Trigger: AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGACAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: DHKVQPELEARCTALLLGQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: EARCTALLLGRRPFLAVQQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACAAAGGGATGATGGGGTaGGCTGGCGAGTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHKGMMG*AGECGW
Trigger: CCACCCACACTCGCCAGCTCACCCCATCATCCCTTT...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTAACCAAGGGAAAGGGATaGTGGGGTGAGCTGGCGAGT +
Preference number: 2 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLTKGKG*WGELAS
Trigger: ACTCGCCAGCTCACCCCATCATCCCTTTCCCTTGGT...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACTTACCCCCACCCCAATaGTCTGTCCCTGCAGATATC +
Preference number: 2 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHLPPPQ*SVPADI
Trigger: GATATCTGCAGGGACAGAGCATTGGGGTGGGGGTAA...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACGGGTGGCCACGGCTCTaGAATAGCACTTATGTCATG +
Preference number: 2 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHGWPRL*NSTYVM
Trigger: CATGACATAAGTGCTATTGCAGAGCCGTGGCCACCC...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAAGCAGTCAGGAGTTCCTaGGTGGCCACGGCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: EARCTALLLGRRPFLAVQAVRSS*VATALQ
Trigger: TTGCAGAGCCGTGGCCACCCAGGAACTCCTGACTGC...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTACAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGGCCAGAGTAGAGAATaGCTTCAGAGTCCTGACTTC +
Preference number: 2 (lower is better)
Translates to: STTKFSQSLRLDAQPCYWGQSRE*LQSPDF
Trigger: GAAGTCAGGACTCTGAAGTCATTCTCTACTCTGGCC...CCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR GCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGAGCTTGAGGCTAGATaGACAGCCTTGCTATTGGGA +
Preference number: 2 (lower is better)
Translates to: DHKVQPELEARCTALLLGELEAR*TALLLG
Trigger: TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAATTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 2 (lower is better)
Translates to: LSTHPLPHTVARIVRGKEFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACTTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 2 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACGGGGGAGGGAGGTCCTaGTCTAGACATTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHGGGRS*SRHSEL
Trigger: AAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCC...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
3UTR CAA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATaGGGAAGAAGGCCTTTTCTAGCTGTACAACACAGTCTCACTGGG +
Preference number: 2 (lower is better)
Translates to: HKVQPELEARCTALL*GRRPFLAVQHSLTG
Trigger: CCCAGTGAGACTGTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CAA 90 bp GTCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACAGTCTC +
Preference number: 2 (lower is better)
Translates to: VDHKVQPELEARCTA*LLGRRPFLAVQHSL
Trigger: GAGACTGTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGTGAGCTGGCGAGTGTaGGTGGGAAATGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: DHKVQPELEARCTALLLGVSWRV*VGNEMF
Trigger: AAACATTTCATTTCCCACCCACACTCGCCAGCTCAC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 2 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAA +
Preference number: 2 (lower is better)
Translates to: DHKVQPELEARCTALLLGGRETV*NDTGNK
Trigger: TTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTACCAAGGGAAAGGGATaGTGGGGTGAGCTGGCGAGT +
Preference number: 2 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGTKGKG*WGELAS
Trigger: ACTCGCCAGCTCACCCCATCATCCCTTTCCCTTGGT...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGACCAATGCTCTGTCCCTaGAGATATCAGAAGACAGTG +
Preference number: 2 (lower is better)
Translates to: HKVQPELEARCTALLLGRPMLCP*RYQKTV
Trigger: CACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG...TCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTATTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 2 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCTTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 2 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTGCTGGCGAGTGTGGGTaGGAAATGAAATGTTTATTG +
Preference number: 2 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLAGECG*EMKCLL
Trigger: CAATAAACATTTCATTTCCCACCCACACTCGCCAGC...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGGGGGAGGGAGGTCCTaGTCTAGACATTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIGGGRS*SRHSEL
Trigger: AAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 2 (lower is better)
Translates to: LSTHPLPHTVARIVRGKEGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACAGGGGTAAAGAAGCATaGGGCACAATATTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHRGKEA*GTIFCC
Trigger: GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCT...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTAGTGAGCTGGCGAGTGTaGGTGGGAAATGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: LEARCTALLLGRRPFLAVVSWRV*VGNEMF
Trigger: AAACATTTCATTTCCCACCCACACTCGCCAGCTCAC...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CAA 90 bp CACTGTATCTTTAGATTGATGTCGACCACAAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: HCIFRLMSTTKFSQS*RLDAQPCYWEEGLF
Trigger: GAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGACATCAATCTAAAGATACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACACTGTATCTTTAGATTaGTGTCGACCACAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHTVSLD*CRPQSS
Trigger: TGAACTTTGTGGTCGACATCAATCTAAAGATACAGT...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTATGACTTCAGAGTCCTaGCTTCAACTGTTCTATTGT +
Preference number: 2 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCMTSES*LQLFYC
Trigger: ACAATAGAACAGTTGAAGTCAGGACTCTGAAGTCAT...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR TCA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAATGTGTGCACTGTCTCTaGTGGAAAACATCTCATTTT +
Preference number: 2 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKCVHCL*WKTSHF
Trigger: AAAATGAGATGTTTTCCATCAGAGACAGTGCACACA...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR TCA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTAGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 2 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp AATGTCACCATCAGCAAGGTCAGCTTGACACTCAAGTGGAAGATTAGGGAAGAAGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 2 (lower is better)
Translates to: NVTISKVSLTLKWKIREEGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...TTCTTCCCTAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGATGGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTTTACCCCCACCCCAATaGTCTGTCCCTGCAGATATC +
Preference number: 2 (lower is better)
Translates to: CNSTYVMEVISHLLHILFLPPPQ*SVPADI
Trigger: GATATCTGCAGGGACAGAGCATTGGGGTGGGGGTAA...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAAAATGTCATCACAGATTaGATAGTACATCCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: EARCTALLLGRRPFLAVQNVITD*IVHPGA
Trigger: TGCACCTGGATGTACTATCCAATCTGTGATGACATT...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACTATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHYQKTV*FSCSEV
Trigger: AACTTCAGAGCATGAAAATCACACTGTCTTCTGATA...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACGCAGTTGTGACACGATaGGAACAAAGTTGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHAVVTR*EQSCWP
Trigger: TGGCCAACAACTTTGTTCTCATCGTGTCACAACTGC...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR GCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 2 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR CAA 90 bp CTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGATaGATGTCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCA +
Preference number: 2 (lower is better)
Translates to: LGFWNKVIVRHCIFR*MSTTKFSQSLRLDA
Trigger: TGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGACATCAATCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTAACATCTCATTTTCTTaGCTGGGTTGCAGTTGTGAC +
Preference number: 2 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGNISFS*LGCSCD
Trigger: GTCACAACTGCAACCCAGTCAAGAAAATGAGATGTT...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR GCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCATTACCCCCACCCCAATaGTCTGTCCCTGCAGATATC +
Preference number: 2 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPLPPPQ*SVPADI
Trigger: GATATCTGCAGGGACAGAGCATTGGGGTGGGGGTAA...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGACTACGTCCAACTGTTTaGATGCTCTCCGGAATAGCA +
Preference number: 2 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRLRPTV*MLSGIA
Trigger: TGCTATTCCGGAGAGCATTCAAACAGTTGGACGTAG...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR GCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTT +
Preference number: 2 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRGFGQS*FYVQLF
Trigger: AAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCC...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR TCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGATCAGCAAGGTCAGCTTaGCACTCAAGTGGAAGATTA +
Preference number: 2 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRSARSA*HSSGRL
Trigger: TAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGA...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 2 (lower is better)
Translates to: VPADIRRQCDFHALKFSFGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCACCAATGCTCTGTCCCTaGAGATATCAGAAGACAGTG +
Preference number: 2 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPPMLCP*RYQKTV
Trigger: CACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTCTTTGCCTAGGTTTTTaGAACAAGGTTATAGTCAGA +
Preference number: 2 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGLCLGF*NKVIVR
Trigger: TCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAG...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCAGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 2 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTGCTGGCGAGTGTGGGTaGGAAATGAAATGTTTATTG +
Preference number: 2 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLAGECG*EMKCLL
Trigger: CAATAAACATTTCATTTCCCACCCACACTCGCCAGC...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTTATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: CNSTYVMEVISHLLHILFYQKTV*FSCSEV
Trigger: AACTTCAGAGCATGAAAATCACACTGTCTTCTGATA...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR TCA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTCTTATGTCATGGAAGTaGTATCCCACCTCCTACATA +
Preference number: 2 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFLMSWK*YPTSYI
Trigger: TATGTAGGAGGTGGGATATCACTTCCATGACATAAG...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 2 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR GCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCAGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 2 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCATCTCATTTTCTTGACTaGGTTGCAGTTGTGACACGA +
Preference number: 2 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPSHFLD*VAVVTR
Trigger: TCGTGTCACAACTGCAACCCAGTCAAGAAAATGAGA...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR CCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTCTTTGCCTAGGTTTTTaGAACAAGGTTATAGTCAGA +
Preference number: 2 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLLCLGF*NKVIVR
Trigger: TCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAG...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR TCA 72 bp TCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGTGCCAGGGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: SSEQHRKGDCLK*HREQTSARGRE
Trigger: CTCCCTCCCCCTGGCACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCT +
Preference number: 3 (lower is better)
Translates to: DHKVQPELEARCTALLLGARCTA*LLGRRP
Trigger: AGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAAGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCT +
Preference number: 3 (lower is better)
Translates to: EARCTALLLGRRPFLAVQARCTA*LLGRRP
Trigger: AGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR TCA 72 bp AAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAACCAGTGCCAGGGGGA +
Preference number: 3 (lower is better)
Translates to: KCPVNSIGRETV*NDTGNKPVPGG
Trigger: TCCCCCTGGCACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR GCA 72 bp GTCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATaGACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTA +
Preference number: 3 (lower is better)
Translates to: VDHKVQPELEAR*TALLLGRRPFL
Trigger: TAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR GCA 72 bp AAGAATGTCCACTTCCCCAAGGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTTGAATGCTCTCCGGAA +
Preference number: 3 (lower is better)
Translates to: KNVHFPKGFGQS*FYVQLFECSPE
Trigger: TTCCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAGTGGACATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR CAA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTATCAGCAAGGTCAGCTaGACACTCAAGTGGAAGATT +
Preference number: 3 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLISKVS*TLKWKI
Trigger: AATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGAT...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR TCA 72 bp GGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTaGTATCCCACCTCCTACATATACTCTTTGCCTAGG +
Preference number: 3 (lower is better)
Translates to: GHGSAIALMSWK*YPTSYIYSLPR
Trigger: CCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAATCAGCAAGGTCAGCTaGACACTCAAGTGGAAGATT +
Preference number: 3 (lower is better)
Translates to: HKVQPELEARCTALLLGRISKVS*TLKWKI
Trigger: AATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGAT...TCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCT +
Preference number: 3 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGKFSQS*RLDAQP
Trigger: AGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTT...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CCA 72 bp CACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATaGGGCACAATATTCTGCTGCCTTCATGTAACTTAC +
Preference number: 3 (lower is better)
Translates to: HTVARIVRGKEA*GTIFCCLHVTY
Trigger: GTAAGTTACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: DHKVQPELEARCTALLLGEMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTAGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LEARCTALLLGRRPFLAVEMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACGAAAGTCTGCCAGACTaGAGTTATGTTGTCTTTTAT +
Preference number: 3 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHESLPD*SYVVFY
Trigger: ATAAAAGACAACATAACTCAAGTCTGGCAGACTTTC...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR TCA 72 bp CACGATGAGAACAAAGTTGTTGGCCAGAGTAGAGAATaGCTTCAGAGTCCTGACTTCAACTGTTCTATTGTG +
Preference number: 3 (lower is better)
Translates to: HDENKVVGQSRE*LQSPDFNCSIV
Trigger: CACAATAGAACAGTTGAAGTCAGGACTCTGAAGTCATTCTCTACTCTGGCCAACAACTTTGTTCTCATCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR TCA 72 bp CCAATGCTCTGTCCCTGCAGATATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTTCAGTTTTACATCCAA +
Preference number: 3 (lower is better)
Translates to: PMLCPCRYQKTV*FSCSEVQFYIQ
Trigger: TTGGATGTAAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTTCTACGTCCAACTGTTaGAATGCTCTCCGGAATAGC +
Preference number: 3 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFSTSNC*NALRNS
Trigger: GCTATTCCGGAGAGCATTCAAACAGTTGGACGTAGA...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR CAA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTGAATGTCATCACAGATaGGATAGTACATCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFECHHR*DSTSRC
Trigger: GCACCTGGATGTACTATCCAATCTGTGATGACATTC...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAATGAGAACAAAGTTGTaGGCCAGAGTAGAGAATGAC +
Preference number: 3 (lower is better)
Translates to: RLELCCLLLAGNVITDWIMRTKL*ARVEND
Trigger: GTCATTCTCTACTCTGGCCAACAACTTTGTTCTCAT...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367095.7
3UTR-3UTR CAA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATATCTTTGCCTAGGTTTTaGGAACAAGGTTATAGTCAG +
Preference number: 3 (lower is better)
Translates to: RLELCCLLLAGNVITDWISLPRF*EQGYSQ
Trigger: CTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGA...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR-3UTR CAA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFEMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTTCTGCAGAACCTCCTaGTGCAGCAGCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDFCRTS*CSSRAL
Trigger: GAGTGCCCGGCTGCTGCAGCAGGAGGTTCTGCAGAA...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACGCAGCCGGGCACTCGTaGTGTTATCCTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDAAGHS*CYPELA
Trigger: TGCAAGCTCAGGATAACATCACGAGTGCCCGGCTGC...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR GCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTTTCTGCAGAACCTCCTaGTGCAGCAGCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETFCRTS*CSSRAL
Trigger: GAGTGCCCGGCTGCTGCAGCAGGAGGTTCTGCAGAA...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETRHSCG*KVPVPA
Trigger: GGCTGGGACGGGAACCTTCCACCCACAGCTATGCCT...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCRHSCG*KVPVPA
Trigger: GGCTGGGACGGGAACCTTCCACCCACAGCTATGCCT...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGGGCCCCTGATACCTaGCTCCAGAGAAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDWAPDT*LQRSRV
Trigger: TACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCA...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR CCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGCAGTCAGGAGTTCCTaGGTGGCCACGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETAVRSS*VATALQ
Trigger: TTGCAGAGCCGTGGCCACCCAGGAACTCCTGACTGC...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAATTGGCCCTGGGCCCCTaGTACCTGGCTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSTHPLPHTVARIVRGKELALGP*YLAPEK
Trigger: CTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAA...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTACCAAGGGAAAGGGATaGTGGGGTGAGCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETTKGKG*WGELAS
Trigger: ACTCGCCAGCTCACCCCATCATCCCTTTCCCTTGGT...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTGCTTGAGGGCTGGCTaGCTGGAGGCAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCCLRAG*LEAAGS
Trigger: AGAACCAGCTGCCTCCAGGCAGCCAGCCCTCAAGCA...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGTTCTGCAGAACCTCCTaGTGCAGCAGCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PRALVRAASTSNCLNALRFCRTS*CSSRAL
Trigger: GAGTGCCCGGCTGCTGCAGCAGGAGGTTCTGCAGAA...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR CCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSTHPLPHTVARIVRGKERHSCG*KVPVPA
Trigger: GGCTGGGACGGGAACCTTCCACCCACAGCTATGCCT...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACGTCTCGTGTTCCTCCTaGCCTTCCTCCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHVSCSS*PSSQAA
Trigger: GGCTGCTTGGGAGGAAGGCCAGGAGGAACACGAGAC...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTGGAATTCTTGGCCCTaGGCCCCTGATACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCWNSWP*APDTWL
Trigger: GAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCA...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR CCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAATGGCAGGGCCCAAAGTaGAATTCTTGGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSTHPLPHTVARIVRGKEWQGPK*NSWPWA
Trigger: GGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGCCA...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCTTGGCCCTGGGCCCCTaGTACCTGGCTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCLALGP*YLAPEK
Trigger: CTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAA...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGAAAGGGATGATGGGGTaGGCTGGCGAGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: STTKFSQSLRLDAQPCYWKGMMG*AGECGW
Trigger: CCACCCACACTCGCCAGCTCACCCCATCATCCCTTT...CCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTTGCTTGAGGGCTGGCTaGCTGGAGGCAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCCLRAG*LEAAGS
Trigger: AGAACCAGCTGCCTCCAGGCAGCCAGCCCTCAAGCA...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGTGCTTGAGGGCTGGCTaGCTGGAGGCAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KYLLSTHPLPHTVARIVRCLRAG*LEAAGS
Trigger: AGAACCAGCTGCCTCCAGGCAGCCAGCCCTCAAGCA...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGATTCTGCAGAACCTCCTaGTGCAGCAGCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: DHKVQPELEARCTALLLGFCRTS*CSSRAL
Trigger: GAGTGCCCGGCTGCTGCAGCAGGAGGTTCTGCAGAA...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAAAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKRHSCG*KVPVPA
Trigger: GGCTGGGACGGGAACCTTCCACCCACAGCTATGCCT...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAAGTCTCGTGTTCCTCCTaGCCTTCCTCCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKVSCSS*PSSQAA
Trigger: GGCTGCTTGGGAGGAAGGCCAGGAGGAACACGAGAC...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTACAACCCCCTTCACTTaGCAGGGCCCAAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETTTPFT*QGPKWN
Trigger: ATTCCACTTTGGGCCCTGCCAAGTGAAGGGGGTTGT...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTGCAGCCGGGCACTCGTaGTGTTATCCTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCAAGHS*CYPELA
Trigger: TGCAAGCTCAGGATAACATCACGAGTGCCCGGCTGC...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACGCAGTTGTGACACGATaGGAACAAAGTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDAVVTR*EQSCWP
Trigger: TGGCCAACAACTTTGTTCTCATCGTGTCACAACTGC...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAACCAAGGGAAAGGGATaGTGGGGTGAGCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: DHKVQPELEARCTALLLGTKGKG*WGELAS
Trigger: ACTCGCCAGCTCACCCCATCATCCCTTTCCCTTGGT...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAAACCAAGGGAAAGGGATaGTGGGGTGAGCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKTKGKG*WGELAS
Trigger: ACTCGCCAGCTCACCCCATCATCCCTTTCCCTTGGT...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTATTCTGCAGAACCTCCTaGTGCAGCAGCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLFCRTS*CSSRAL
Trigger: GAGTGCCCGGCTGCTGCAGCAGGAGGTTCTGCAGAA...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAAGCATCCGAGACGTTCTaGAGAACCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKASETF*RTSCCS
Trigger: GCTGCAGCAGGAGGTTCTGCAGAACGTCTCGGATGC...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR GCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDGFGQS*FYVQLF
Trigger: AAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCC...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTACCCCCACCCCAATaGTCTGTCCCTGCAGATATC +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCLPPPQ*SVPADI
Trigger: GATATCTGCAGGGACAGAGCATTGGGGTGGGGGTAA...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTGGTCAGAGGTCTCGTGTTCCTCCTaGCCTTCCTCCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISASRSEECPLPQGLWSEVSCSS*PSSQAA
Trigger: GGCTGCTTGGGAGGAAGGCCAGGAGGAACACGAGAC...CTCTGACCAAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCTGGCAGGGCCCAAAGTaGAATTCTTGGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCWQGPK*NSWPWA
Trigger: GGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGCCA...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR CCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTCTTCCCCAAGGGCTTTaGTCAGAGCTGCTTCTACGT +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCLPQGL*SELLLR
Trigger: ACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAG...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AATGGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGACTTCCCCAAGGGCTTTaGTCAGAGCTGCTTCTACGT +
Preference number: 4 (lower is better)
Translates to: NGTHGQGREVSSEQHRKGLPQGL*SELLLR
Trigger: ACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAG...TCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTATTGGCCCTGGGCCCCTaGTACCTGGCTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVLALGP*YLAPEK
Trigger: CTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAA...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCGCAGCCGGGCACTCGTaGTGTTATCCTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCAAGHS*CYPELA
Trigger: TGCAAGCTCAGGATAACATCACGAGTGCCCGGCTGC...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCCTACGTCCAACTGTTTaGATGCTCTCCGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCLRPTV*MLSGIA
Trigger: TGCTATTCCGGAGAGCATTCAAACAGTTGGACGTAG...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTAGCAGCCGGGCACTCGTaGTGTTATCCTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLAAGHS*CYPELA
Trigger: AGCAAGCTCAGGATAACATCACGAGTGCCCGGCTGC...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCCAGAAACCGCCTGTGTaGACTGTCTCTGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCQKPPV*TVSDGK
Trigger: TTTTCCATCAGAGACAGTGCACACAGGCGGTTTCTG...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCGFGQS*FYVQLF
Trigger: AAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCC...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTCCAATGCTCTGTCCCTaGAGATATCAGAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETPMLCP*RYQKTV
Trigger: CACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGTCTTGCGAGACGTTCTaGAGAACCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: STTKFSQSLRLDAQPCYWSCETF*RTSCCS
Trigger: GCTGCAGCAGGAGGTTCTGCAGAACGTCTCGCAAGA...CCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000611909.4
CDS-3UTR CCA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGATGGAATTCTTGGCCCTaGGCCCCTGATACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HKVQPELEARCTALLLGRWNSWP*APDTWL
Trigger: GAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCA...TCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACACAACCCCCTTCACTTaGCAGGGCCCAAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHTTPFT*QGPKWN
Trigger: ATTCCACTTTGGGCCCTGCCAAGTGAAGGGGGTTGT...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CCA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTGGGGGAGGGAGGTCCTaGTCTAGACATTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLGGGRS*SRHSEL
Trigger: AAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCC...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGGGGAGGGAGGTCCTaGTCTAGACATTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KYLLSTHPLPHTVARIVRGGGRS*SRHSEL
Trigger: AAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCC...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTTTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCGTGAGCTGGCGAGTGTaGGTGGGAAATGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCVSWRV*VGNEMF
Trigger: AAACATTTCATTTCCCACCCACACTCGCCAGCTCAC...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACAACATCTCATTTTCTTaGCTGGGTTGCAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDNISFS*LGCSCD
Trigger: GTCACAACTGCAACCCAGTCAAGAAAATGAGATGTT...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR GCA 90 bp AATGGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGACCAATGCTCTGTCCCTaGAGATATCAGAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: NGTHGQGREVSSEQHRKGPMLCP*RYQKTV
Trigger: CACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG...TCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAATTACCCCCACCCCAATaGTCTGTCCCTGCAGATATC +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKLPPPQ*SVPADI
Trigger: GATATCTGCAGGGACAGAGCATTGGGGTGGGGGTAA...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGGGTGGCCACGGCTCTaGAATAGCACTTATGTCATG +
Preference number: 4 (lower is better)
Translates to: DHKVQPELEARCTALLLGGWPRL*NSTYVM
Trigger: CATGACATAAGTGCTATTGCAGAGCCGTGGCCACCC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGAGGGCAGAAGGGTCTaGTGGCTAAAGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPREGRRV*WLKSTG
Trigger: GCCTGTGGACTTTAGCCAGCAGACCCTTCTGCCCTC...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTGGCCAGAGTAGAGAATaGCTTCAGAGTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCGQSRE*LQSPDF
Trigger: GAAGTCAGGACTCTGAAGTCATTCTCTACTCTGGCC...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp AATGGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: NGTHGQGREVSSEQHRKGGRETV*NDTGNK
Trigger: TTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCC...TCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCGRETV*NDTGNK
Trigger: TTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCC...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTACCAAGGGAAAGGGATaGTGGGGTGAGCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LVEFLHPGQKNVHFPKGFTKGKG*WGELAS
Trigger: ACTCGCCAGCTCACCCCATCATCCCTTTCCCTTGGT...AAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TTCAGAGCTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAATGCTTGAGGGCTGGCTaGCTGGAGGCAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FRACRISASRSEECPLPQCLRAG*LEAAGS
Trigger: AGAACCAGCTGCCTCCAGGCAGCCAGCCCTCAAGCA...TTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAGCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LSTHPLPHTVARIVRGKEGFGQS*FYVQLF
Trigger: AAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCC...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGCCAATGCTCTGTCCCTaGAGATATCAGAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: PRALVRAASTSNCLNALRPMLCP*RYQKTV
Trigger: CACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR GCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTAGGGTGGCCACGGCTCTaGAATAGCACTTATGTCATG +
Preference number: 4 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLGWPRL*NSTYVM
Trigger: CATGACATAAGTGCTATTGCAGAGCCGTGGCCACCC...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAGGGTGGCCACGGCTCTaGAATAGCACTTATGTCATG +
Preference number: 4 (lower is better)
Translates to: HKVQPELEARCTALLLGRGWPRL*NSTYVM
Trigger: CATGACATAAGTGCTATTGCAGAGCCGTGGCCACCC...TCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AATGGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGACTGCCTGGAGGCAGCTaGTTCTTTTTACAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: NGTHGQGREVSSEQHRKGLPGGS*FFLQKS
Trigger: ACTTTTCTGTAAAAAGAACCAGCTGCCTCCAGGCAG...TCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACAGGGGTAAAGAAGCATaGGGCACAATATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHRGKEA*GTIFCC
Trigger: GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCT...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTGCTGGCGAGTGTGGGTaGGAAATGAAATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCAGECG*EMKCLL
Trigger: CAATAAACATTTCATTTCCCACCCACACTCGCCAGC...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTCTTTGCAGCCTCTGTTaGAAATTCATCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCLCSLC*KFISQS
Trigger: AGACTGAGAGATGAATTTTCAACAGAGGCTGCAAAG...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCATGACTTCAGAGTCCTaGCTTCAACTGTTCTATTGT +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCMTSES*LQLFYC
Trigger: ACAATAGAACAGTTGAAGTCAGGACTCTGAAGTCAT...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTTGTGTGCACTGTCTCTaGTGGAAAACATCTCATTTT +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETCVHCL*WKTSHF
Trigger: AAAATGAGATGTTTTCCATCAGAGACAGTGCACACA...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDYQKTV*FSCSEV
Trigger: AACTTCAGAGCATGAAAATCACACTGTCTTCTGATA...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACTCAGCAAGGTCAGCTTaGCACTCAAGTGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHSARSA*HSSGRL
Trigger: TAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGA...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGCAGCCGGGCACTCGTaGTGTTATCCTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIAAGHS*CYPELA
Trigger: AGCAAGCTCAGGATAACATCACGAGTGCCCGGCTGC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGCAGAACCTCCTGCTaGAGCAGCCGGGCACTCGTG +
Preference number: 4 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHCRTSC*SSRALV
Trigger: CACGAGTGCCCGGCTGCTGCAGCAGGAGGTTCTGCA...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTCAGAAACCGCCTGTGTaGACTGTCTCTGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCQKPPV*TVSDGK
Trigger: TTTTCCATCAGAGACAGTGCACACAGGCGGTTTCTG...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: THGQGREVSSEQHRKGDCDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGACAACCCCCTTCACTTaGCAGGGCCCAAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRTTPFT*QGPKWN
Trigger: ATTCCACTTTGGGCCCTGCCAAGTGAAGGGGGTTGT...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR CCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACCTTCCCCAAGGGCTTTaGTCAGAGCTGCTTCTACGT +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHLPQGL*SELLLR
Trigger: ACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAG...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTGGGGGAGGGAGGTCCTaGTCTAGACATTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LVEFLHPGQKNVHFPKGFGGGRS*SRHSEL
Trigger: AAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCC...AAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGAGGGGTAAAGAAGCATaGGGCACAATATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KYLLSTHPLPHTVARIVRRGKEA*GTIFCC
Trigger: GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCT...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAAGTGAGCTGGCGAGTGTaGGTGGGAAATGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKVSWRV*VGNEMF
Trigger: AAACATTTCATTTCCCACCCACACTCGCCAGCTCAC...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGTAGACTCTTCACAGCATCCAGAGGCACCTTCCCTGACTGTCACTGGCGCTGCAATGTCATCACAGATTaGATAGTACATCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: CRLFTASRGTFPDCHWRCNVITD*IVHPGA
Trigger: TGCACCTGGATGTACTATCCAATCTGTGATGACATT...GCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTGGATGCTGTGAAGAGTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACCTTTGCCTAGGTTTTTaGAACAAGGTTATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDLCLGF*NKVIVR
Trigger: TCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAG...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTGCAGTCAGGAGTTCCTaGGTGGCCACGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGAVRSS*VATALQ
Trigger: TTGCAGAGCCGTGGCCACCCAGGAACTCCTGACTGC...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTCTCGTGATGTTATCCTaGGCTTGCATAGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLLVMLS*ACIVSF
Trigger: GAAAGACACTATGCAAGCTCAGGATAACATCACGAG...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR TCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGGCCAGAGTAGAGAATaGCTTCAGAGTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRGQSRE*LQSPDF
Trigger: GAAGTCAGGACTCTGAAGTCATTCTCTACTCTGGCC...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLGRETV*NDTGNK
Trigger: TTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCC...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGAACAAACCAGTGCCAGGGGGAGGGAGGTCCTGGTCTAGACATTCAGAGCTTGTATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GTNQCQGEGGPGLDIQSLYQKTV*FSCSEV
Trigger: AACTTCAGAGCATGAAAATCACACTGTCTTCTGATA...CAAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCCTGGCACTGGTTTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAATCAGCAAGGTCAGCTTaGCACTCAAGTGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKSARSA*HSSGRL
Trigger: TAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGA...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTACTGTATCTTTAGATTaGTGTCGACCACAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETTVSLD*CRPQSS
Trigger: TGAACTTTGTGGTCGACATCAATCTAAAGATACAGT...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACTCGTGATGTTATCCTaGGCTTGCTGGCTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LEARCTALLLGRRPFLAVLVMLS*ACWLKS
Trigger: GGACTTTAGCCAGCAAGCTCAGGATAACATCACGAG...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTGCATCCGAGACGTTCTaGAGAACCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGASETF*RTSCCS
Trigger: GCTGCAGCAGGAGGTTCTGCAGAACGTCTCGGATGC...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR GCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACGAGCTTGAGGCTAGATaGACAGCCTTGCTATTGGGA +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHELEAR*TALLLG
Trigger: TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTC...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTGAGGGCAGAAGGGTCTaGTGGCTAAAGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGEGRRV*WLKSTG
Trigger: GCCTGTGGACTTTAGCCAGCAGACCCTTCTGCCCTC...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367093.3
CDS-3UTR GCA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAAACATCTCATTTTCTTaGGAGACGTTCTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: LSTHPLPHTVARIVRGKENISFS*ETFCRT
Trigger: GGTTCTGCAGAACGTCTCGCAAGAAAATGAGATGTT...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000611909.4
CDS-3UTR CCA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAACTGCCTGGAGGCAGCTaGTTCTTTTTACAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKLPGGS*FFLQKS
Trigger: ACTTTTCTGTAAAAAGAACCAGCTGCCTCCAGGCAG...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTTGGGCCCCTGATACCTaGCTCCAGAGAAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGWAPDT*LQRSRV
Trigger: TACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCA...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CCA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGTCTCATTTTCTTGACTaGGTTGCAGTTGTGACACGA +
Preference number: 4 (lower is better)
Translates to: PRALVRAASTSNCLNALRSHFLD*VAVVTR
Trigger: TCGTGTCACAACTGCAACCCAGTCAAGAAAATGAGA...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR CCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTGCTGGCGAGTGTGGGTaGGAAATGAAATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCAGECG*EMKCLL
Trigger: CAATAAACATTTCATTTCCCACCCACACTCGCCAGC...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTCTTTGCAGCCTCTGTTaGAAATTCATCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FSQSLRLDAQPCYWEEGLLCSLC*KFISQS
Trigger: AGACTGAGAGATGAATTTTCAACAGAGGCTGCAAAG...AAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTAGGCCAGAGTAGAGAATaGCTTCAGAGTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVGQSRE*LQSPDF
Trigger: GAAGTCAGGACTCTGAAGTCATTCTCTACTCTGGCC...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTAGCAGTTGTGACACGATaGGAACAAAGTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEARCTALLLGRRPFLAVAVVTR*EQSCWP
Trigger: TGGCCAACAACTTTGTTCTCATCGTGTCACAACTGC...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR TCA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTAACATCTCATTTTCTTaGCTGGGTTGCAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCNISFS*LGCSCD
Trigger: GTCACAACTGCAACCCAGTCAAGAAAATGAGATGTT...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACTGTGTGCACTGTCTCTaGTGGAAAACATCTCATTTT +
Preference number: 4 (lower is better)
Translates to: PGWPRLCNSTYVMEVISHCVHCL*WKTSHF
Trigger: AAAATGAGATGTTTTCCATCAGAGACAGTGCACACA...GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTATCAGCAAGGTCAGCTTaGCACTCAAGTGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLSARSA*HSSGRL
Trigger: TAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGA...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAACTTATGTCATGGAAGTaGTATCCCACCTCCTACATA +
Preference number: 4 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKLMSWK*YPTSYI
Trigger: TATGTAGGAGGTGGGATATCACTTCCATGACATAAG...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGCAGAAACCGCCTGTGTaGACTGTCTCTGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRQKPPV*TVSDGK
Trigger: TTTTCCATCAGAGACAGTGCACACAGGCGGTTTCTG...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHGFGQS*FYVQLF
Trigger: AAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCC...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp AATGTCACCATCAGCAAGGTCAGCTTGACACTCAAGTGGAAGATTAGGGAAGAATTACCCCCACCCCAATaGTCTGTCCCTGCAGATATC +
Preference number: 4 (lower is better)
Translates to: NVTISKVSLTLKWKIREELPPPQ*SVPADI
Trigger: GATATCTGCAGGGACAGAGCATTGGGGTGGGGGTAA...TTCTTCCCTAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGATGGTGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTAGAGCTTGAGGCTAGATaGACAGCCTTGCTATTGGGA +
Preference number: 4 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVELEAR*TALLLG
Trigger: TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTC...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTGAGCTTGAGGCTAGATaGACAGCCTTGCTATTGGGA +
Preference number: 4 (lower is better)
Translates to: LVEFLHPGQKNVHFPKGFELEAR*TALLLG
Trigger: TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTC...AAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGGGTGGCCACGGCTCTaGAATAGCACTTATGTCATG +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIGWPRL*NSTYVM
Trigger: CATGACATAAGTGCTATTGCAGAGCCGTGGCCACCC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAACATCTCATTTTCTTaGGAGACGTTCTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: DHKVQPELEARCTALLLGNISFS*ETFCRT
Trigger: GGTTCTGCAGAACGTCTCGCAAGAAAATGAGATGTT...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000611909.4
CDS-3UTR CCA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGACTGCCTGGAGGCAGCTaGTTCTTTTTACAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: HKVQPELEARCTALLLGRLPGGS*FFLQKS
Trigger: ACTTTTCTGTAAAAAGAACCAGCTGCCTCCAGGCAG...TCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAATTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKFLVLN*RKQLLI
Trigger: GATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAA...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGTCTCGTGTTCCTCCTaGCCTTCCTCCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFVSCSS*PSSQAA
Trigger: GGCTGCTTGGGAGGAAGGCCAGGAGGAACACGAGAC...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGGAATTCTTGGCCCTaGGCCCCTGATACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHWNSWP*APDTWL
Trigger: GAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCA...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CCA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGTCTCATTTTCTTGACTaGGTTGCAGTTGTGACACGA +
Preference number: 4 (lower is better)
Translates to: KYLLSTHPLPHTVARIVRSHFLD*VAVVTR
Trigger: TCGTGTCACAACTGCAACCCAGTCAAGAAAATGAGA...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR CCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGTTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACGTGAGCTGGCGAGTGTaGGTGGGAAATGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHVSWRV*VGNEMF
Trigger: AAACATTTCATTTCCCACCCACACTCGCCAGCTCAC...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGTGAGCTGGCGAGTGTaGGTGGGAAATGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRVSWRV*VGNEMF
Trigger: AAACATTTCATTTCCCACCCACACTCGCCAGCTCAC...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCAGTCAGGAGTTCCTaGGTGGCCACGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFAVRSS*VATALQ
Trigger: TTGCAGAGCCGTGGCCACCCAGGAACTCCTGACTGC...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGATGACTTCAGAGTCCTaGCTTCAACTGTTCTATTGT +
Preference number: 4 (lower is better)
Translates to: KYLLSTHPLPHTVARIVRMTSES*LQLFYC
Trigger: ACAATAGAACAGTTGAAGTCAGGACTCTGAAGTCAT...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR TCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAAAAGGGATGATGGGGTaGGCTGGCGAGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRKGMMG*AGECGW
Trigger: CCACCCACACTCGCCAGCTCACCCCATCATCCCTTT...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGACTGTATCTTTAGATTaGTGTCGACCACAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PRALVRAASTSNCLNALRTVSLD*CRPQSS
Trigger: TGAACTTTGTGGTCGACATCAATCTAAAGATACAGT...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR TCA 90 bp ATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTGGTCAGAGCTTATGTCATGGAAGTaGTATCCCACCTCCTACATA +
Preference number: 4 (lower is better)
Translates to: ISASRSEECPLPQGLWSELMSWK*YPTSYI
Trigger: TATGTAGGAGGTGGGATATCACTTCCATGACATAAG...CTCTGACCAAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 4 (lower is better)
Translates to: DHKVQPELEARCTALLLGGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRRHSCG*KVPVPA
Trigger: GGCTGGGACGGGAACCTTCCACCCACAGCTATGCCT...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGATCTCATTTTCTTGACTaGGTTGCAGTTGTGACACGA +
Preference number: 4 (lower is better)
Translates to: HKVQPELEARCTALLLGRSHFLD*VAVVTR
Trigger: TCGTGTCACAACTGCAACCCAGTCAAGAAAATGAGA...TCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR CCA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAAGCTGGCGAGTGTGGGTaGGAAATGAAATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: EARCTALLLGRRPFLAVQAGECG*EMKCLL
Trigger: CAATAAACATTTCATTTCCCACCCACACTCGCCAGC...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACGCTGGCGAGTGTGGGTaGGAAATGAAATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHAGECG*EMKCLL
Trigger: CAATAAACATTTCATTTCCCACCCACACTCGCCAGC...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CAA 72 bp AAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAA +
Preference number: 4 (lower is better)
Translates to: KVQPELEARCTA*LLGRRPFLAVQ
Trigger: TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTACTCGTGATGTTATCCTaGGCTTGCATAGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVLVMLS*ACIVSF
Trigger: GAAAGACACTATGCAAGCTCAGGATAACATCACGAG...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR TCA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCTGTGTGCACTGTCTCTaGTGGAAAACATCTCATTTT +
Preference number: 4 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCCVHCL*WKTSHF
Trigger: AAAATGAGATGTTTTCCATCAGAGACAGTGCACACA...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AATGTCACCATCAGCAAGGTCAGCTTGACACTCAAGTGGAAGATTAGGGAAGAACTACGTCCAACTGTTTaGATGCTCTCCGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: NVTISKVSLTLKWKIREELRPTV*MLSGIA
Trigger: TGCTATTCCGGAGAGCATTCAAACAGTTGGACGTAG...TTCTTCCCTAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGATGGTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTCTACGTCCAACTGTTTaGATGCTCTCCGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARILRPTV*MLSGIA
Trigger: TGCTATTCCGGAGAGCATTCAAACAGTTGGACGTAG...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTCAGAGGCACCTTCCCTaGCTGTCACTGGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLQRHLP*LSLALL
Trigger: AAGCAGCGCCAGTGACAGTCAGGGAAGGTGCCTCTG...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAATATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKYQKTV*FSCSEV
Trigger: AACTTCAGAGCATGAAAATCACACTGTCTTCTGATA...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCAAAAGGGATGATGGGGTaGGCTGGCGAGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPKGMMG*AGECGW
Trigger: CCACCCACACTCGCCAGCTCACCCCATCATCCCTTT...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAGCATCCGAGACGTTCTaGAGAACCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRASETF*RTSCCS
Trigger: GCTGCAGCAGGAGGTTCTGCAGAACGTCTCGGATGC...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR GCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTCAGAAACCGCCTGTGTaGACTGTCTCTGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIQKPPV*TVSDGK
Trigger: TTTTCCATCAGAGACAGTGCACACAGGCGGTTTCTG...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTAGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LEARCTALLLGRRPFLAVDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAAGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: EARCTALLLGRRPFLAVQDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTAGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 4 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCATGGCAGGGCCCAAAGTaGAATTCTTGGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPWQGPK*NSWPWA
Trigger: GGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGCCA...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTCTTCCCCAAGGGCTTTaGTCAGAGCTGCTTCTACGT +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFLPQGL*SELLLR
Trigger: ACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAG...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGGGGGAGGGAGGTCCTaGTCTAGACATTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFGGGRS*SRHSEL
Trigger: AAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCC...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAACTTTGCCTAGGTTTTTaGAACAAGGTTATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKLCLGF*NKVIVR
Trigger: TCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAG...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CAA 72 bp TTTAGATTGATGTCGACCACAAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FRLMSTTKFSQS*RLDAQPCYWEE
Trigger: TTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGACATCAATCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACTGTGTGCACTGTCTCTaGTGGAAAACATCTCATTTT +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHCVHCL*WKTSHF
Trigger: AAAATGAGATGTTTTCCATCAGAGACAGTGCACACA...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACCTCGTGATGTTATCCTaGGCTTGCTGGCTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHLVMLS*ACWLKS
Trigger: GGACTTTAGCCAGCAAGCTCAGGATAACATCACGAG...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTGAGCTTGAGGCTAGATaGACAGCCTTGCTATTGGGA +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFELEAR*TALLLG
Trigger: TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTC...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGATCTTGCGAGACGTTCTaGAGAACCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRSCETF*RTSCCS
Trigger: GCTGCAGCAGGAGGTTCTGCAGAACGTCTCGCAAGA...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000611909.4
CDS-3UTR CCA 90 bp CTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTTTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LVEFLHPGQKNVHFPKGFFLVLN*RKQLLI
Trigger: GATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAA...AAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTGGGCCCCTGATACCTaGCTCCAGAGAAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLWAPDT*LQRSRV
Trigger: TACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCA...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR TCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTCTTTGCAGCCTCTGTTaGAAATTCATCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARILCSLC*KFISQS
Trigger: AGACTGAGAGATGAATTTTCAACAGAGGCTGCAAAG...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTCTCGTGATGTTATCCTaGGCTTGCATAGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGLVMLS*ACIVSF
Trigger: GAAAGACACTATGCAAGCTCAGGATAACATCACGAG...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR TCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACACTGTATCTTTAGATTaGTGTCGACCACAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHTVSLD*CRPQSS
Trigger: TGAACTTTGTGGTCGACATCAATCTAAAGATACAGT...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACCCAATGCTCTGTCCCTaGAGATATCAGAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHPMLCP*RYQKTV
Trigger: CACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTCTGCCTGGAGGCAGCTaGTTCTTTTTACAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGLPGGS*FFLQKS
Trigger: ACTTTTCTGTAAAAAGAACCAGCTGCCTCCAGGCAG...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTTTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIFLVLN*RKQLLI
Trigger: GATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAA...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGACTTCCCCAAGGGCTTTaGTCAGAGCTGCTTCTACGT +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRLPQGL*SELLLR
Trigger: ACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAG...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCAGTTGTGACACGATaGGAACAAAGTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFAVVTR*EQSCWP
Trigger: TGGCCAACAACTTTGTTCTCATCGTGTCACAACTGC...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR TCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTCTACGTCCAACTGTTTaGATGCTCTCCGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFLRPTV*MLSGIA
Trigger: TGCTATTCCGGAGAGCATTCAAACAGTTGGACGTAG...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTTCAGCAAGGTCAGCTTaGCACTCAAGTGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFSARSA*HSSGRL
Trigger: TAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGA...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGCCTAGGTCTTATGTCATGGAAGTaGTATCCCACCTCCTACATA +
Preference number: 4 (lower is better)
Translates to: HLCHGSDIPPPTYTLCLGLMSWK*YPTSYI
Trigger: TATGTAGGAGGTGGGATATCACTTCCATGACATAAG...ACCTAGGCAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTCTGCCTGGAGGCAGCTaGTTCTTTTTACAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFLPGGS*FFLQKS
Trigger: ACTTTTCTGTAAAAAGAACCAGCTGCCTCCAGGCAG...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTAGGGGTAAAGAAGCATaGGGCACAATATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFRGKEA*GTIFCC
Trigger: GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCT...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTAATGTCATCACAGATTaGATAGTACATCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FIKYLLSTHPLPHTVARINVITD*IVHPGA
Trigger: TGCACCTGGATGTACTATCCAATCTGTGATGACATT...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
3UTR CAA 72 bp ATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATaGGATAGTACATCCAGGTGCAATGTCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: MLSFISRECHHR*DSTSRCNVTIS
Trigger: GCTGATGGTGACATTGCACCTGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAACAACCATCTGCATTTaGGAGGCTGTCGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RLELCCLLLAGNVITDWITTICI*EAVASK
Trigger: TTTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGT...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR TCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTAACATCTCATTTTCTTaGCTGGGTTGCAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFNISFS*LGCSCD
Trigger: GTCACAACTGCAACCCAGTCAAGAAAATGAGATGTT...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR GCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTGACTGTCACTGGCGCTaGTTAAAGAATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFDCHWR*LKNDFF
Trigger: AAAGAAGTCATTCTTTAAGCAGCGCCAGTGACAGTC...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACATGACTTCAGAGTCCTaGCTTCAACTGTTCTATTGT +
Preference number: 4 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHMTSES*LQLFYC
Trigger: ACAATAGAACAGTTGAAGTCAGGACTCTGAAGTCAT...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS-3UTR TCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTCTACGTCCAACTGTTTaGATGCTCTCCGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLLRPTV*MLSGIA
Trigger: TGCTATTCCGGAGAGCATTCAAACAGTTGGACGTAG...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAGGAGACTGTTTGAAATaGCACAGGGAACAAACCAGT +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRGDCLK*HREQTS
Trigger: ACTGGTTTGTTCCCTGTGTCATTTCAAACAGTCTCC...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTCTTATGTCATGGAAGTaGTATCCCACCTCCTACATA +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFLMSWK*YPTSYI
Trigger: TATGTAGGAGGTGGGATATCACTTCCATGACATAAG...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTCAGAAACCGCCTGTGTaGACTGTCTCTGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFQKPPV*TVSDGK
Trigger: TTTTCCATCAGAGACAGTGCACACAGGCGGTTTCTG...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCAGGCTTTGGTCAGAGCTaGTTCTACGTCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPGFGQS*FYVQLF
Trigger: AAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCC...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTTTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFFLVLN*RKQLLI
Trigger: GATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAA...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATATTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 4 (lower is better)
Translates to: RLELCCLLLAGNVITDWIFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTTCCCTGACTGTCACTaGCGCTGCTTAAAGAATGAC +
Preference number: 4 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLFPDCH*RCLKND
Trigger: GTCATTCTTTAAGCAGCGCCAGTGACAGTCAGGGAA...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGGGGTAAAGAAGCATaGGGCACAATATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFRGKEA*GTIFCC
Trigger: GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCT...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTAATGTCATCACAGATTaGATAGTACATCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VPADIRRQCDFHALKFSFNVITD*IVHPGA
Trigger: TGCACCTGGATGTACTATCCAATCTGTGATGACATT...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: RLELCCLLLAGNVITDWIGRETV*NDTGNK
Trigger: TTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCC...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTGGAAGGGAGACTGTTTaGAATGACACAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFGRETV*NDTGNK
Trigger: TTTGTTCCCTGTGTCATTTCAAACAGTCTCCCTTCC...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 4 (lower is better)
Translates to: CNSTYVMEVISHLLHILFGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCACTTTGCAGCCTCTGTTaGAAATTCATCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPLCSLC*KFISQS
Trigger: AGACTGAGAGATGAATTTTCAACAGAGGCTGCAAAG...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLFLVLN*RKQLLI
Trigger: GATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAA...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR GCA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGGCACAATATTCTGCTaGCTTCATGTAACTTACAGT +
Preference number: 4 (lower is better)
Translates to: RLELCCLLLAGNVITDWIGTIFC*LHVTYS
Trigger: ACTGTAAGTTACATGAAGGCAGCAGAATATTGTGCC...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp TTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACATCCAAATGTCATCACAGATTaGATAGTACATCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LCCLLLAGNVITDWIVHPNVITD*IVHPGA
Trigger: TGCACCTGGATGTACTATCCAATCTGTGATGACATT...TGGATGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CCA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGACTTTGCCTAGGTTTTTaGAACAAGGTTATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRLCLGF*NKVIVR
Trigger: TCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAG...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR TCA 90 bp AGACTTGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATATATCAGAAGACAGTGTaGTTTTCATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RLELCCLLLAGNVITDWIYQKTV*FSCSEV
Trigger: AACTTCAGAGCATGAAAATCACACTGTCTTCTGATA...TATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS CCA 90 bp TGGCAGGGCCCAAAGTGGAATTCTTGGCCCTGGGCCCCTGATACCTaGCTCCAGAGAAGCAGGGTAAAACCCAGGCAAGGGAGCACAACC +
Preference number: 5 (lower is better)
Translates to: WQGPKWNSWPWAPDT*LQRSRVKPRQGSTT
Trigger: GGTTGTGCTCCCTTGCCTGGGTTTTACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS TCA 90 bp CTTCACTTGGCAGGGCCCAAAGTGGAATTCTTGGCCCTGGGCCCCTaGTACCTGGCTCCAGAGAAGCAGGGTAAAACCCAGGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LHLAGPKVEFLALGP*YLAPEKQGKTQARE
Trigger: CTCCCTTGCCTGGGTTTTACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGCCAAGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS TCA 90 bp AGAAGCAGGGTAAAACCCAGGCAAGGGAGCACAACCATCTGCATTTaGGAGGCTGTCGCCAGCAAAGGAGGGCAGAAGGGTCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RSRVKPRQGSTTICI*EAVASKGGQKGLLA
Trigger: AGCCAGCAGACCCTTCTGCCCTCCTTTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGTGCTCCCTTGCCTGGGTTTTACCCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000391929.7
CDS-3UTR CAA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACCATCACAGTCATGTCTaGTCCCTCTGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDHHSHV*SLWSCK
Trigger: CTTACAGGACCAGAGGGACAAGACATGACTGTGATG...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTCACAACCATCTGCATTaGAGAGGCTGTCGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETHNHLH*RGCRQQ
Trigger: TTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGTG...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS TCA 90 bp AGAAGCAGGGTAAAACCCAGGCAAGGGAGCACAACCATCTGCATTTaGGAGGCTGTCGCCAGCAAAGGAGGGCAGAAGGGTCTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: RSRVKPRQGSTTICI*EAVASKGGQKGLAK
Trigger: TTTAGCCAGACCCTTCTGCCCTCCTTTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGTGCTCCCTTGCCTGGGTTTTACCCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294984.7
CDS-3UTR CAA 90 bp GGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGCACAGCCTTGCTATaGGGAAGAAGGCCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: GTHGQGREVSSEQHRKGDCTALL*GRRPFL
Trigger: TAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCA...GTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: THGQGREVSSEQHRKGDCARCTA*LLGRRP
Trigger: AGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AATGGGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGACATCACAGTCATGTCTaGTCCCTCTGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: NGTHGQGREVSSEQHRKGHHSHV*SLWSCK
Trigger: CTTACAGGACCAGAGGGACAAGACATGACTGTGATG...TCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GGAACAAACCAGTGCCAGGGGGAGGGAGGTCCTGGTCTAGACATTCAGAGCTTGTGCACAGCCTTGCTATaGGGAAGAAGGCCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: GTNQCQGEGGPGLDIQSLCTALL*GRRPFL
Trigger: TAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCA...CAAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCCTGGCACTGGTTTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS CCA 90 bp AGACAGGCACCTTCACCATTCACCAATCAGAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCCGTGGAAGTCATTTCAGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: RQAPSPFTNQRHSCG*KVPVPAVEVISEVK
Trigger: CTTTACTTCTGAAATGACTTCCACGGCTGGGACGGGAACCTTCCACCCACAGCTATGCCTCTGATTGGTGAATGGTGAAGGTGCCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GGAACAAACCAGTGCCAGGGGGAGGGAGGTCCTGGTCTAGACATTCAGAGCTTGCTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GTNQCQGEGGPGLDIQSLLLGVK*AKAAPH
Trigger: ATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAG...CAAGCTCTGAATGTCTAGACCAGGACCTCCCTCCCCCTGGCACTGGTTTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTATCAGCAAGGTCAGCTaGACACTCAAGTGGAAGATT +
Preference number: 5 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETISKVS*TLKWKI
Trigger: AATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGAT...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCARCTA*LLGRRP
Trigger: AGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS CCA 90 bp CCTGGCCTTCCTCCCAAGCAGCCTCAATTCTTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATCACAGTCATGTCTTGTCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PGLPPKQPQFFLVLN*RKQLLITVMSCPSG
Trigger: ACCAGAGGGACAAGACATGACTGTGATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAGAATTGAGGCTGCTTGGGAGGAAGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAACATCACAGTCATGTCTaGTCCCTCTGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKHHSHV*SLWSCK
Trigger: CTTACAGGACCAGAGGGACAAGACATGACTGTGATG...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTCTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: THGQGREVSSEQHRKGDCLLGVK*AKAAPH
Trigger: ATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAG...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTGCTTTGCAGCCTCTGTaGAAAATTCATCTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: THGQGREVSSEQHRKGDCALQPL*KIHLSV
Trigger: GACTGAGAGATGAATTTTCAACAGAGGCTGCAAAGC...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTGATGTTATCCTGAGCTaGCATAGTGTCTTTCACAGC +
Preference number: 5 (lower is better)
Translates to: THGQGREVSSEQHRKGDCDVILS*HSVFHS
Trigger: GCTGTGAAAGACACTATGCAAGCTCAGGATAACATC...ACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS-3UTR CAA 90 bp GGACCCATGGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTATGAGAACAAAGTTGTaGGCCAGAGTAGAGAATGAC +
Preference number: 5 (lower is better)
Translates to: GPMAKGVKCPVNSIGRETMRTKL*ARVEND
Trigger: GTCATTCTCTACTCTGGCCAACAACTTTGTTCTCAT...AGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCCATGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR CAA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGTCTACGTCCAACTGTTaGAATGCTCTCCGGAATAGC +
Preference number: 5 (lower is better)
Translates to: PRALVRAASTSNCLNALRSTSNC*NALRNS
Trigger: GCTATTCCGGAGAGCATTCAAACAGTTGGACGTAGA...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR CAA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTAAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLKFSQS*RLDAQP
Trigger: AGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTT...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCTTTGCAGCCTCTGTaGAAAATTCATCTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: LSTHPLPHTVARIVRGKEALQPL*KIHLSV
Trigger: GACTGAGAGATGAATTTTCAACAGAGGCTGCAAAGC...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACCACAACCATCTGCATTaGAGAGGCTGTCGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHHNHLH*RGCRQQ
Trigger: TTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGTG...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CAA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGATCAGCAAGGTCAGCTaGACACTCAAGTGGAAGATT +
Preference number: 5 (lower is better)
Translates to: PRALVRAASTSNCLNALRISKVS*TLKWKI
Trigger: AATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGAT...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR CAA 90 bp TCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGTGCACAGCCTTGCTATaGGGAAGAAGGCCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: STTKFSQSLRLDAQPCYWCTALL*GRRPFL
Trigger: TAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCA...CCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGCTTTGCAGCCTCTGTaGAAAATTCATCTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKALQPL*KIHLSV
Trigger: GACTGAGAGATGAATTTTCAACAGAGGCTGCAAAGC...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGATCAGCAAGGTCAGCTaGACACTCAAGTGGAAGATT +
Preference number: 5 (lower is better)
Translates to: STTKFSQSLRLDAQPCYWISKVS*TLKWKI
Trigger: AATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGAT...CCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTGAATGTCATCACAGATaGGATAGTACATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCECHHR*DSTSRC
Trigger: GCACCTGGATGTACTATCCAATCTGTGATGACATTC...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTACATCACAGTCATGTCTaGTCCCTCTGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVHHSHV*SLWSCK
Trigger: CTTACAGGACCAGAGGGACAAGACATGACTGTGATG...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLLLGVK*AKAAPH
Trigger: ATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAG...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GGCCAAGGGCGTGAAGTGTCCAGTGAACAGCATAGGAAGGGAGACTGTTTGAAAATGAGAACAAAGTTGTaGGCCAGAGTAGAGAATGAC +
Preference number: 5 (lower is better)
Translates to: GQGREVSSEQHRKGDCLKMRTKL*ARVEND
Trigger: GTCATTCTCTACTCTGGCCAACAACTTTGTTCTCAT...TTTCAAACAGTCTCCCTTCCTATGCTGTTCACTGGACACTTCACGCCCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367095.7
ENST00000391929.7
CDS-3UTR CAA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAATCTACGTCCAACTGTTaGAATGCTCTCCGGAATAGC +
Preference number: 5 (lower is better)
Translates to: EARCTALLLGRRPFLAVQSTSNC*NALRNS
Trigger: GCTATTCCGGAGAGCATTCAAACAGTTGGACGTAGA...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGTCTACGTCCAACTGTTaGAATGCTCTCCGGAATAGC +
Preference number: 5 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRSTSNC*NALRNS
Trigger: GCTATTCCGGAGAGCATTCAAACAGTTGGACGTAGA...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCGAATGTCATCACAGATaGGATAGTACATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCECHHR*DSTSRC
Trigger: GCACCTGGATGTACTATCCAATCTGTGATGACATTC...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAACACTGCACAGCCTTGCTATaGGGAAGAAGGCCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: ARCTALLLGRRPFLAVQHCTALL*GRRPFL
Trigger: TAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCA...GTGTTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIARCTA*LLGRRP
Trigger: AGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTCAGAGCTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: FRACRISASRSEECPLPQKFSQS*RLDAQP
Trigger: AGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTT...TTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAGCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGCACTGTATCTTTAGATaGATGTCGACCACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: PRALVRAASTSNCLNALRHCIFR*MSTTKF
Trigger: GAACTTTGTGGTCGACATCAATCTAAAGATACAGTG...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR CAA 90 bp GACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAAACATCTCATTTTCTaGCGAGACGTTCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: DHKVQPELEARCTALLLGKHLIF*RDVLQN
Trigger: GTTCTGCAGAACGTCTCGCAAGAAAATGAGATGTTT...TCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000611909.4
CDS-3UTR CAA 90 bp AATGTCACCATCAGCAAGGTCAGCTTGACACTCAAGTGGAAGATTAGGGAAGAACATCACAGTCATGTCTaGTCCCTCTGGTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: NVTISKVSLTLKWKIREEHHSHV*SLWSCK
Trigger: CTTACAGGACCAGAGGGACAAGACATGACTGTGATG...TTCTTCCCTAATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGATGGTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGCTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRLLGVK*AKAAPH
Trigger: ATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAG...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AGAATGACTTCTTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCTTTGCAGCCTCTGTaGAAAATTCATCTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: RMTSLTIILGQEWDPWPRALQPL*KIHLSV
Trigger: GACTGAGAGATGAATTTTCAACAGAGGCTGCAAAGC...CCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAAGAAGTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTAGATGTTATCCTGAGCTaGCATAGTGTCTTTCACAGC +
Preference number: 5 (lower is better)
Translates to: LEARCTALLLGRRPFLAVDVILS*HSVFHS
Trigger: GCTGTGAAAGACACTATGCAAGCTCAGGATAACATC...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CAA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTATCTACGTCCAACTGTTaGAATGCTCTCCGGAATAGC +
Preference number: 5 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVSTSNC*NALRNS
Trigger: GCTATTCCGGAGAGCATTCAAACAGTTGGACGTAGA...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CCAAGGGCTTTGGTCAGAGCTGCTTCTACGTCCAACTGTTTGAATGCTCTCCGGGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PRALVRAASTSNCLNALREMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...CCGGAGAGCATTCAAACAGTTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367095.7
CDS-3UTR CAA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGAAAGTCTGCCAGACTaGAGTTATGTTGTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: LSTHPLPHTVARIVRGKEESLPD*SYVVFY
Trigger: ATAAAAGACAACATAACTCAAGTCTGGCAGACTTTC...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGTCTTTGCCTAGGTTTTaGGAACAAGGTTATAGTCAG +
Preference number: 5 (lower is better)
Translates to: KYLLSTHPLPHTVARIVRSLPRF*EQGYSQ
Trigger: CTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGA...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTGACAATAATCCTGGGCCAAGAATGGGACCCATGGCCAAGGGCGTGAAGTGTTCTTTGCCTAGGTTTTaGGAACAAGGTTATAGTCAG +
Preference number: 5 (lower is better)
Translates to: FDNNPGPRMGPMAKGVKCSLPRF*EQGYSQ
Trigger: CTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGA...ACACTTCACGCCCTTGGCCATGGGTCCCATTCTTGGCCCAGGATTATTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAATCCTACATATACTCTTaGCCTAGGTTTTTGGAACAA +
Preference number: 5 (lower is better)
Translates to: LSTHPLPHTVARIVRGKESYIYS*PRFLEQ
Trigger: TTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGA...TTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTTCTACGTCCAACTGTTaGAATGCTCTCCGGAATAGC +
Preference number: 5 (lower is better)
Translates to: FIKYLLSTHPLPHTVARISTSNC*NALRNS
Trigger: GCTATTCCGGAGAGCATTCAAACAGTTGGACGTAGA...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSTHPLPHTVARIVRGKEMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...TTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp AAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: KYLLSTHPLPHTVARIVREMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...CCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAAGTCTGCCAGACTaGAGTTATGTTGTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: STTKFSQSLRLDAQPCYWESLPD*SYVVFY
Trigger: ATAAAAGACAACATAACTCAAGTCTGGCAGACTTTC...CCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTTTGTGGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHKFSQS*RLDAQP
Trigger: AGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTT...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTAAGTTCAGCCAGAGCTaGAGGCTAGATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: VPADIRRQCDFHALKFSFKFSQS*RLDAQP
Trigger: AGGCTGTGCATCTAGCCTCAAGCTCTGGCTGAACTT...AAAACTGAACTTCAGAGCATGAAAATCACACTGTCTTCTGATATCTGCAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACACTGTATCTTTAGATaGATGTCGACCACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: WPRLCNSTYVMEVISHLLHCIFR*MSTTKF
Trigger: GAACTTTGTGGTCGACATCAATCTAAAGATACAGTG...TAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTCTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: FIKYLLSTHPLPHTVARILLGVK*AKAAPH
Trigger: ATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAG...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGAATGTCATCACAGATaGGATAGTACATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIECHHR*DSTSRC
Trigger: GCACCTGGATGTACTATCCAATCTGTGATGACATTC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCGAAAGTCTGCCAGACTaGAGTTATGTTGTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: TVARIVRGKEAWGTIFCCESLPD*SYVVFY
Trigger: ATAAAAGACAACATAACTCAAGTCTGGCAGACTTTC...GCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp GAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTACAATCTTTGCCTAGGTTTTaGGAACAAGGTTATAGTCAG +
Preference number: 5 (lower is better)
Translates to: EARCTALLLGRRPFLAVQSLPRF*EQGYSQ
Trigger: CTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGA...TTGTACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAGCTAGATGCACAGCCTaGCTATTGGGAAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRARCTA*LLGRRP
Trigger: AGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGC...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGTATCCTACATATACTCTTaGCCTAGGTTTTTGGAACAA +
Preference number: 5 (lower is better)
Translates to: LEARCTALLLGRRPFLAVSYIYS*PRFLEQ
Trigger: TTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGA...TACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTAAACATCTCATTTTCTaGCGAGACGTTCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIKHLIF*RDVLQN
Trigger: GTTCTGCAGAACGTCTCGCAAGAAAATGAGATGTTT...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000611909.4
CDS-3UTR CAA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTCACAACCATCTGCATTaGAGAGGCTGTCGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFHNHLH*RGCRQQ
Trigger: TTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGTG...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CAA 90 bp AGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTAGAAAGTCTGCCAGACTaGAGTTATGTTGTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: RIVRGKEAWGTIFCCLHVESLPD*SYVVFY
Trigger: ATAAAAGACAACATAACTCAAGTCTGGCAGACTTTC...TACATGAAGGCAGCAGAATATTGTGCCCCATGCTTCTTTACCCCTCACAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTCAGAGCTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAACACTGTATCTTTAGATaGATGTCGACCACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: FRACRISASRSEECPLPQHCIFR*MSTTKF
Trigger: GAACTTTGTGGTCGACATCAATCTAAAGATACAGTG...TTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAGCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CTTGTAGAATTTCTGCATCCAGGTCAGAAGAATGTCCACTTCCCCAAGGGCTTTTCCTACATATACTCTTaGCCTAGGTTTTTGGAACAA +
Preference number: 5 (lower is better)
Translates to: LVEFLHPGQKNVHFPKGFSYIYS*PRFLEQ
Trigger: TTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGA...AAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGGATGCAGAAATTCTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGAAATGAAATGTTTATaGAGGATCTGCTTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: FIKYLLSTHPLPHTVARIEMKCL*RICFVL
Trigger: CAGCACAAAGCAGATCCTCAATAAACATTTCATTTC...AATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTAGAGCTTTGCAGCCTCTGTaGAAAATTCATCTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: TLCLGFWNKVIVRHCIFRALQPL*KIHLSV
Trigger: GACTGAGAGATGAATTTTCAACAGAGGCTGCAAAGC...TCTAAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp CCTCCTACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACCACTGTATCTTTAGATaGATGTCGACCACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: PPTYTLCLGFWNKVIVRHHCIFR*MSTTKF
Trigger: GAACTTTGTGGTCGACATCAATCTAAAGATACAGTG...GTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTGATGTTATCCTGAGCTaGCATAGTGTCTTTCACAGC +
Preference number: 5 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFDVILS*HSVFHS
Trigger: GCTGTGAAAGACACTATGCAAGCTCAGGATAACATC...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367093.3
CDS-3UTR CAA 90 bp TATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTTATCAGCAAGGTCAGCTaGACACTCAAGTGGAAGATT +
Preference number: 5 (lower is better)
Translates to: YTLCLGFWNKVIVRHCIFISKVS*TLKWKI
Trigger: AATCTTCCACTTGAGTGTCAAGCTGACCTTGCTGAT...AAAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTGAATGTCATCACAGATaGGATAGTACATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLECHHR*DSTSRC
Trigger: GCACCTGGATGTACTATCCAATCTGTGATGACATTC...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp TGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTTCTTTGCCTAGGTTTTaGGAACAAGGTTATAGTCAG +
Preference number: 5 (lower is better)
Translates to: CNSTYVMEVISHLLHILFSLPRF*EQGYSQ
Trigger: CTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGA...AAAGAGTATATGTAGGAGGTGGGATATCACTTCCATGACATAAGTGCTATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000611909.4
CDS-3UTR CAA 90 bp ATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTATCTTATGAGAACAAAGTTGTaGGCCAGAGTAGAGAATGAC +
Preference number: 5 (lower is better)
Translates to: IYSLPRFLEQGYSQTLYLMRTKL*ARVEND
Trigger: GTCATTCTCTACTCTGGCCAACAACTTTGTTCTCAT...AAGATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294984.7
ENST00000367095.7
CDS CCA 72 bp ACCCCCTTCACTTGGCAGGGCCCAAAGTGGAATTCTTaGCCCTGGGCCCCTGATACCTGGCTCCAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: TPFTWQGPKWNS*PWAPDTWLQRS
Trigger: GCTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGCCAAGTGAAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS TCA 72 bp GCAGGGCCCAAAGTGGAATTCTTGGCCCTGGGCCCCTaGTACCTGGCTCCAGAGAAGCAGGGTAAAACCCAG +
Preference number: 6 (lower is better)
Translates to: AGPKVEFLALGP*YLAPEKQGKTQ
Trigger: CTGGGTTTTACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCACTTTGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS CAA 90 bp GAGAAGCAGGGTAAAACCCAGGCAAGGGAGCACAACCATCTGCATTaGAGAGGCTGTCGCCAGCAAAGGAGGGCAGAAGGGTCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: EKQGKTQAREHNHLH*RGCRQQRRAEGSAG
Trigger: GCCAGCAGACCCTTCTGCCCTCCTTTGCTGGCGACAGCCTCTCAAATGCAGATGGTTGTGCTCCCTTGCCTGGGTTTTACCCTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367093.3
ENST00000391929.7
CDS TCA 72 bp TCCTGCTGCAGCAGCCGGGCACTCGTGATGTTATCCTaGGCTTGCTGGCTAAAGTCCACAGGCTTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SCCSSRALVMLS*ACWLKSTGFAA
Trigger: GGCTGCAAAGCCTGTGGACTTTAGCCAGCAAGCTCAGGATAACATCACGAGTGCCCGGCTGCTGCAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367095.7
ENST00000480741.1
ENST00000611909.4
CDS CCA 72 bp CCAAAGTGGAATTCTTGGCCCTGGGCCCCTGATACCTaGCTCCAGAGAAGCAGGGTAAAACCCAGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: PKWNSWPWAPDT*LQRSRVKPRQG
Trigger: CCCTTGCCTGGGTTTTACCCTGCTTCTCTGGAGCCAGGTATCAGGGGCCCAGGGCCAAGAATTCCACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000391929.7
CDS CCA 72 bp CCTTCACCATTCACCAATCAGAGGCATAGCTGTGGGTaGAAGGTTCCCGTCCCAGCCGTGGAAGTCATTTCA +
Preference number: 6 (lower is better)
Translates to: PSPFTNQRHSCG*KVPVPAVEVIS
Trigger: TGAAATGACTTCCACGGCTGGGACGGGAACCTTCCACCCACAGCTATGCCTCTGATTGGTGAATGGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000491169.1
ENST00000611909.4
CDS CAA 90 bp TCCTGGCCTTCCTCCCAAGCAGCCTCAATTCTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCATCACAGTCATGTCTTGTCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SWPSSQAASILLGVK*AKAAPHHSHVLSLW
Trigger: CCAGAGGGACAAGACATGACTGTGATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAGAATTGAGGCTGCTTGGGAGGAAGGCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS CCA 72 bp CTGTTGAAAATTCATCTCTCAGTCTCGTGTTCCTCCTaGCCTTCCTCCCAAGCAGCCTCAATTCTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: LLKIHLSVSCSS*PSSQAASILLG
Trigger: ACCAAGAAGAATTGAGGCTGCTTGGGAGGAAGGCCAGGAGGAACACGAGACTGAGAGATGAATTTTCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS TCA 72 bp TCCGGAATAGCAGAAACCGCCTGTGTGCACTGTCTCTaGTGGAAAACATCTCATTTTCTTGCGAGACGTTCT +
Preference number: 6 (lower is better)
Translates to: SGIAETACVHCL*WKTSHFLARRS
Trigger: AGAACGTCTCGCAAGAAAATGAGATGTTTTCCATCAGAGACAGTGCACACAGGCGGTTTCTGCTATTCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367093.3
ENST00000480741.1
ENST00000611909.4
CDS CCA 72 bp CCTCCCAAGCAGCCTCAATTCTTCTTGGTGTTAAATTaGCGAAAGCAGCTCCTCATCACAGTCATGTCTTGT +
Preference number: 6 (lower is better)
Translates to: PPKQPQFFLVLN*RKQLLITVMSC
Trigger: ACAAGACATGACTGTGATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAGAATTGAGGCTGCTTGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4
CDS CAA 72 bp TCCTCCCAAGCAGCCTCAATTCTTCTTGGTGTTAAATaGGCGAAAGCAGCTCCTCATCACAGTCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSQAASILLGVK*AKAAPHHSHVL
Trigger: CAAGACATGACTGTGATGAGGAGCTGCTTTCGCCAATTTAACACCAAGAAGAATTGAGGCTGCTTGGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294984.7
ENST00000367093.3
ENST00000367095.7
ENST00000391929.7
ENST00000611909.4