Pregenerated sensors for IL22 (Homo sapiens)
Ensembl gene IDs: ENSG00000127318Ensembl transcript IDs: ENST00000328087.6, ENST00000538666.6
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTGGAATCCACCCATCATaGTGGAGTTTGGCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: YLCLESLPSGLINKSGIGGIHPS*WSLASH Trigger: ATGGGAAGCCAAACTCCATCATGATGGGTGGATTCC...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTACGCAGGGGTTCATTTaGAATCCACCCATCATGATG | + |
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Preference number: 2 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPTQGFI*NPPIMM Trigger: CATCATGATGGGTGGATTCCAAATGAACCCCTGCGT...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCGCTGATGGGCGCAGCTaGTCCTCCCTGTACCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: AGVHLESTHHDGVWLPIFADGRS*SSLYQE Trigger: CTCTTGGTACAGGGAGGAGCAGCTGCGCCCATCAGC...GAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR TCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTTGCTTAGCCTGTTGCTaGGCCTGGCCAGGAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFCLACC*AWPGRA Trigger: TGCCCTTCCTGGCCAGGCTCAGCAACAGGCTAAGCA...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTAGGGCTGCTGGAAGTTaGACTTGTCAAGCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFRAAGS*TCQACS Trigger: ACTGCAGGCTTGACAAGTCCAACTTCCAGCAGCCCT...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCTTTTGCACATTCCTCTaGATATGCAGGTCATCACCT | + |
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Preference number: 4 (lower is better) Translates to: AGVHLESTHHDGVWLPIFFCTFL*ICRSSP Trigger: AGGTGATGACCTGCATATCCAGAGGAATGTGCAAAA...GAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| 3UTR CAA 72 bp | GCATTGGTTTCCTTTGTAACTAACGCAGGGGTTCATTaGGAATCCACCCATCATGATGGAGTTTGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ALVSFVTNAGVH*ESTHHDGVWLP Trigger: GGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCCCTGCGTTAGTTACAAAGGAAACCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR TCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTTGGAACCTATCAGATTaGGGGAACAGCACTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFWNLSD*GNSTSS Trigger: TGAAGAAGTGCTGTTCCCTCAATCTGATAGGTTCCA...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR TCA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTAACTCGAGCAACTGGTaGCTGGGGAAGGAGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPNSSNW*LGKENL Trigger: CAGGTTCTCCTTCCCCAGTCACCAGTTGCTCGAGTT...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR TCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTTCATCACCTTCAATATaGCATGTGCTTAGCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFSSPSI*HVLSLL Trigger: CAACAGGCTAAGCACATGTCATATTGAAGGTGATGA...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR TCA 90 bp | ATCGCTTTGGGGCATCTAATTGTTATTTCTAGCAGGGAAAGGGGGTTAGTTATTGGAATCCACCCATCATaGTGGAGTTTGGCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IALGHLIVISSRERGLVIGIHPS*WSLASH Trigger: ATGGGAAGCCAAACTCCATCATGATGGGTGGATTCC...AATAACTAACCCCCTTTCCCTGCTAGAAATAACAATTAGATGCCCCAAAGCGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTGAGCTCACAGATTTCTaGAGGGCGGCCATTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPELTDF*RAAIAD Trigger: GTCTGCAATGGCCGCCCTGCAGAAATCTGTGAGCTC...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR GCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTATCCAGTTCTCCAATTaGTTTGATCTCTCCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFIQFSN*FDLSTL Trigger: GAGAGTGGAGAGATCAAAGCAATTGGAGAACTGGAT...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR GCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTTTTGCTCTGGTCAAATaGAGGCATTTCTCAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFFALVK*RHFSET Trigger: TGTCTCTGAGAAATGCCTGCATTTGACCAGAGCAAA...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTCATCATGATGGAGTTTaGCTTCCCATCTTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFHHDGV*LPIFLL Trigger: CAAAAGGAAGATGGGAAGCCAAACTCCATCATGATG...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR GCA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTACATTCCTCTGGATATaGAGGTCATCACCTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFTFLWI*RSSPSI Trigger: TATTGAAGGTGATGACCTGCATATCCAGAGGAATGT...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTCGAGCAACTGGTGACTaGGGAAGGAGAACCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YLCLESLPSGLINKSGIGRATGD*GRRTCS Trigger: AGAACAGGTTCTCCTTCCCCAGTCACCAGTTGCTCG...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR TCA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTACAGTTTCTCCCCAATaGGACGAACGTCTGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: YLCLESLPSGLINKSGIGTVSPQ*DERLCC Trigger: ACAACACAGACGTTCGTCTCATTGGGGAGAAACTGT...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTGTGTCCTTCAGCTTTTaGACATTCCTCTGGATATGC | + |
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Preference number: 4 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPVSFSF*TFLWIC Trigger: GCATATCCAGAGGAATGTGCAAAAGCTGAAGGACAC...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTCTCATACTGACTCCGTaGAACAGTTTCTCCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: YLCLESLPSGLINKSGIGLILTP*NSFSPM Trigger: CATTGGGGAGAAACTGTTCCACGGAGTCAGTATGAG...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTACGCAGGGGTTCATTTaGAATCCACCCATCATGATG | + |
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Preference number: 4 (lower is better) Translates to: YLCLESLPSGLINKSGIGTQGFI*NPPIMM Trigger: CATCATGATGGGTGGATTCCAAATGAACCCCTGCGT...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTTTCAGCTTTGCTCTaGTCAAATGCAGGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: YLCLESLPSGLINKSGIGFSALL*SNAGIS Trigger: AGAAATGCCTGCATTTGACCAGAGCAAAGCTGAAAA...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CCA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTAGAAAGTCTACCTTCTaGTCTTATAAACAAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPRKSTF*SYKQKW Trigger: CCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCT...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS GCA 90 bp | GAAGTTGGACTTGTCAAGCCTGCAGTGGGAGCTGATGGGCGCAGCTaGTCCTCCCTGTACCAAGAGGGCCAAGAGAAGGAGGCAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: EVGLVKPAVGADGRS*SSLYQEGQEKEAAG Trigger: ACCAGCTGCCTCCTTCTCTTGGCCCTCTTGGTACAGGGAGGAGCAGCTGCGCCCATCAGCTCCCACTGCAGGCTTGACAAGTCCAACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS TCA 90 bp | TATAGGGCTGCTGGAAGTTGGACTTGTCAAGCCTGCAGTGGGAGCTaGTGGGCGCAGCTGCTCCTCCCTGTACCAAGAGGGCCAAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: YRAAGSWTCQACSGS*WAQLLLPVPRGPRE Trigger: TTCTCTTGGCCCTCTTGGTACAGGGAGGAGCAGCTGCGCCCATCAGCTCCCACTGCAGGCTTGACAAGTCCAACTTCCAGCAGCCCTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS TCA 90 bp | AAGGCTGGAACCTATCAGATTGAGGGAACAGCACTTCTTCAAGGGTaGAGTTCAGCACCTGCTTCATCAGATAGCAGCGCTCACTCATAC | + |
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Preference number: 5 (lower is better) Translates to: KAGTYQIEGTALLQG*SSAPASSDSSAHSY Trigger: GTATGAGTGAGCGCTGCTATCTGATGAAGCAGGTGCTGAACTTCACCCTTGAAGAAGTGCTGTTCCCTCAATCTGATAGGTTCCAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | GCAGGGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTGGAACCTATCAGATaGAGGGAACAGCACTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGVHLESTHHDGVWLPIFLEPIR*REQHFF Trigger: GAAGAAGTGCTGTTCCCTCAATCTGATAGGTTCCAG...GAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | GGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCCTTTAGACGAACGTCTGTGTaGTTATCAGCCAAGCTAGCC | + |
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Preference number: 5 (lower is better) Translates to: GFIWNPPIMMEFGFPSSFRRTSV*LSAKLA Trigger: GGCTAGCTTGGCTGATAACAACACAGACGTTCGTCT...AAAGGAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | GCAGGGGTTCATTTGGAATCCACCCATCATGATGGAGTTTGGCTTCCCATCTTCATTCATTTTTCAGCTTaGCTCTGGTCAAATGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AGVHLESTHHDGVWLPIFIHFSA*LWSNAG Trigger: GCCTGCATTTGACCAGAGCAAAGCTGAAAAATGAAT...GAAGATGGGAAGCCAAACTCCATCATGATGGGTGGATTCCAAATGAACCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS GCA 90 bp | GCAGGCATTTCTCAGAGACATAAACAGCAAATCCAGTTCTCCAATTaGTTTGATCTCTCCACTCTCTCCAAGCTTTTTCACTGTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: AGISQRHKQQIQFSN*FDLSTLSKLFHCVL Trigger: AAGGACACAGTGAAAAAGCTTGGAGAGAGTGGAGAGATCAAAGCAATTGGAGAACTGGATTTGCTGTTTATGTCTCTGAGAAATGCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTTCTGCAGGGCGGCCATaGCAGACAATTCTAACTCGA | + |
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Preference number: 5 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPSAGRP*QTILTR Trigger: TCGAGTTAGAATTGTCTGCAATGGCCGCCCTGCAGA...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | TATCTATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTGCTGGAAGTTGGACTaGTCAAGCCTGCAGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: YLCLESLPSGLINKSGIGCWKLD*SSLQWE Trigger: CTCCCACTGCAGGCTTGACAAGTCCAACTTCCAGCA...ACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCATAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | ATCGCTTTGGGGCATCTAATTGTTATTTCTAGCAGGGAAAGGGGGTTAGTTATTAACGCAGGGGTTCATTaGGAATCCACCCATCATGAT | + |
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Preference number: 5 (lower is better) Translates to: IALGHLIVISSRERGLVINAGVH*ESTHHD Trigger: ATCATGATGGGTGGATTCCAAATGAACCCCTGCGTT...AATAACTAACCCCCTTTCCCTGCTAGAAATAACAATTAGATGCCCCAAAGCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS CCA 90 bp | TCTAGCAGGGAAAGGGGGTTAGTTATTCATTTTTCAGCTTTGCTCTaGTCAAATGCAGGCATTTCTCAGAGACATAAACAGCAAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: SSRERGLVIHFSALL*SNAGISQRHKQQIQ Trigger: CTGGATTTGCTGTTTATGTCTCTGAGAAATGCCTGCATTTGACCAGAGCAAAGCTGAAAAATGAATAACTAACCCCCTTTCCCTGCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | ATCGCTTTGGGGCATCTAATTGTTATTTCTAGCAGGGAAAGGGGGTTAGTTATTAGTTCTCCAATTGCTTaGATCTCTCCACTCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: IALGHLIVISSRERGLVISSPIA*ISPLSP Trigger: TGGAGAGAGTGGAGAGATCAAAGCAATTGGAGAACT...AATAACTAACCCCCTTTCCCTGCTAGAAATAACAATTAGATGCCCCAAAGCGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTAGAAAGTCTACCTTCTGGTCTTATAAACAAAAGTGGCATTGGTTTCCTTGTGTCCTTCAGCTTTaGCACATTCCTCTGGATATG | + |
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Preference number: 5 (lower is better) Translates to: MLRKSTFWSYKQKWHWFPCVLQL*HIPLDM Trigger: CATATCCAGAGGAATGTGCAAAAGCTGAAGGACACA...AGGAAACCAATGCCACTTTTGTTTATAAGACCAGAAGGTAGACTTTCTAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS TCA 72 bp | GCTGGAAGTTGGACTTGTCAAGCCTGCAGTGGGAGCTaGTGGGCGCAGCTGCTCCTCCCTGTACCAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: AGSWTCQACSGS*WAQLLLPVPRG Trigger: CCCTCTTGGTACAGGGAGGAGCAGCTGCGCCCATCAGCTCCCACTGCAGGCTTGACAAGTCCAACTTCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS GCA 72 bp | GCCAGGGTCCCCATAAGGAAAGAGCTCACAGATTTCTaGAGGGCGGCCATTGCAGACAATTCTAACTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: ARVPIRKELTDF*RAAIADNSNSS Trigger: GCTCGAGTTAGAATTGTCTGCAATGGCCGCCCTGCAGAAATCTGTGAGCTCTTTCCTTATGGGGACCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CAA 90 bp | CAGGAAGGGCACCACCTCCTGCATATAAGGCTGGAACCTATCAGATaGAGGGAACAGCACTTCTTCAAGGGTGAAGTTCAGCACCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QEGHHLLHIRLEPIR*REQHFFKGEVQHLL Trigger: AAGCAGGTGCTGAACTTCACCCTTGAAGAAGTGCTGTTCCCTCAATCTGATAGGTTCCAGCCTTATATGCAGGAGGTGGTGCCCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CAA 72 bp | TGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTaGTTATCAGCCAAGCTAGCCTCCTTAGCCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: WNSFSPMRRTSV*LSAKLASLASM Trigger: CATGCTGGCTAAGGAGGCTAGCTTGGCTGATAACAACACAGACGTTCGTCTCATTGGGGAGAAACTGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS TCA 72 bp | ACCTATCAGATTGAGGGAACAGCACTTCTTCAAGGGTaGAGTTCAGCACCTGCTTCATCAGATAGCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: TYQIEGTALLQG*SSAPASSDSSA Trigger: AGCGCTGCTATCTGATGAAGCAGGTGCTGAACTTCACCCTTGAAGAAGTGCTGTTCCCTCAATCTGATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CAA 72 bp | CACCACCTCCTGCATATAAGGCTGGAACCTATCAGATaGAGGGAACAGCACTTCTTCAAGGGTGAAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HHLLHIRLEPIR*REQHFFKGEVQ Trigger: CTGAACTTCACCCTTGAAGAAGTGCTGTTCCCTCAATCTGATAGGTTCCAGCCTTATATGCAGGAGGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CCA 72 bp | CCATTGCAGACAATTCTAACTCGAGCAACTGGTGACTaGGGAAGGAGAACCTGTTCTGAAGATTCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLQTILTRATGD*GRRTCSEDSAC Trigger: ACAAGCAGAATCTTCAGAACAGGTTCTCCTTCCCCAGTCACCAGTTGCTCGAGTTAGAATTGTCTGCAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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| CDS GCA 72 bp | CTCTCTCCAAGCTTTTTCACTGTGTCCTTCAGCTTTTaGACATTCCTCTGGATATGCAGGTCATCACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSPSFFTVSFSF*TFLWICRSSPS Trigger: TGAAGGTGATGACCTGCATATCCAGAGGAATGTGCAAAAGCTGAAGGACACAGTGAAAAAGCTTGGAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CAA 72 bp | ACTCTCTCCAAGCTTTTTCACTGTGTCCTTCAGCTTTaGCACATTCCTCTGGATATGCAGGTCATCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLSKLFHCVLQL*HIPLDMQVITF Trigger: GAAGGTGATGACCTGCATATCCAGAGGAATGTGCAAAAGCTGAAGGACACAGTGAAAAAGCTTGGAGAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CAA 90 bp | GATCTCTCCACTCTCTCCAAGCTTTTTCACTGTGTCCTTCAGCTTTaGCACATTCCTCTGGATATGCAGGTCATCACCTTCAATATGACA | + |
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Preference number: 6 (lower is better) Translates to: DLSTLSKLFHCVLQL*HIPLDMQVITFNMT Trigger: TGTCATATTGAAGGTGATGACCTGCATATCCAGAGGAATGTGCAAAAGCTGAAGGACACAGTGAAAAAGCTTGGAGAGAGTGGAGAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS GCA 72 bp | TCTCAGAGACATAAACAGCAAATCCAGTTCTCCAATTaGTTTGATCTCTCCACTCTCTCCAAGCTTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SQRHKQQIQFSN*FDLSTLSKLFH Trigger: GTGAAAAAGCTTGGAGAGAGTGGAGAGATCAAAGCAATTGGAGAACTGGATTTGCTGTTTATGTCTCTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328087.6 ENST00000538666.6 |
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| CDS CAA 90 bp | GTTATTTCTAGCAGGGAAAGGGGGTTAGTTATTCATTTTTCAGCTTaGCTCTGGTCAAATGCAGGCATTTCTCAGAGACATAAACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VISSRERGLVIHFSA*LWSNAGISQRHKQQ Trigger: TTGCTGTTTATGTCTCTGAGAAATGCCTGCATTTGACCAGAGCAAAGCTGAAAAATGAATAACTAACCCCCTTTCCCTGCTAGAAATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000538666.6 |
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