RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL21R (Homo sapiens)

Ensembl gene IDs: ENSG00000103522

Ensembl transcript IDs: ENST00000337929.8, ENST00000395754.4, ENST00000561953.1, ENST00000564089.5, ENST00000564583.1

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCACCCCCGCCCGCCTCGGCTCTGGCCGCAGAAGGAAGGAAGCTaGCGTTTATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGG +
Preference number: 1 (lower is better)
Translates to: SHPRPPRLWPQKEGS*RLLRVCSGLRTVHG
Trigger: CCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAATAAACGTCAGCTTCCTTCCTTCTGCGGCCAGAGCCGAGGCGGGCGGGGGTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR GCA 90 bp GGAGGCAGACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATaGCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGC +
Preference number: 1 (lower is better)
Translates to: GGRRWRAGLRLSHRQ*PDPTKPRRCCGPTC
Trigger: GCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 90 bp TCCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTaGCCTTGTCTCTGGCTCAGGGCCCAGTGGCCTGGCCAGCTCTGG +
Preference number: 1 (lower is better)
Translates to: SRRPKAAGVFTSQPR*PCLWLRAQWPGQLW
Trigger: CCAGAGCTGGCCAGGCCACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 90 bp CAGACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTaGTCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACAC +
Preference number: 1 (lower is better)
Translates to: QTLEGWAPPQSQAMP*SHKAPEMLWTNLQH
Trigger: GTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 90 bp CCTAGGGTGCAGGTGCACGGGGTGTTGAGGGCTGCGCCTGCTCCGTaGAGAAGCTGTGTTTCCACTCTTGTGCTCCCATCCAAGTCTCAC +
Preference number: 1 (lower is better)
Translates to: PRVQVHGVLRAAPAP*RSCVSTLVLPSKSH
Trigger: GTGAGACTTGGATGGGAGCACAAGAGTGGAAACACAGCTTCTGCACGGAGCAGGCGCAGCCCTCAACACCCCGTGCACCTGCACCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR TCA 90 bp GTGCACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTaGATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: VHMGELRESRHAQGR*MHGVPWALSQAHRH
Trigger: GTGCCTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CCA 90 bp CTGGCCGCAGAAGGAAGGAAGCTGACGTTTATTGAGGGTCTGCTCTaGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: LAAEGRKLTFIEGLL*AAYRTRVTSPISPR
Trigger: CCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAATAAACGTCAGCTTCCTTCCTTCTGCGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR CCA 90 bp CTTTCCTGGGAGCCTGTGGCTCAGGTGGCACCCACAGGTGGCTCCTaGAACCTGTTGCCCCCAAGAAGGTGTGAAAACCACAGCACATCT +
Preference number: 1 (lower is better)
Translates to: LSWEPVAQVAPTGGS*NLLPPRRCENHSTS
Trigger: AGATGTGCTGTGGTTTTCACACCTTCTTGGGGGCAACAGGTTCCAGGAGCCACCTGTGGGTGCCACCTGAGCCACAGGCTCCCAGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR TCA 90 bp CCACCCCACTTCACAGATGAGTCACGAAGGAACCTTCCGCAGGACTaGCCTGTGCTGACTTCCAACCCGACCCTGTTGCAAAAGCATGGG +
Preference number: 1 (lower is better)
Translates to: PPHFTDESRRNLPQD*PVLTSNPTLLQKHG
Trigger: CCCATGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTTCGTGACTCATCTGTGAAGTGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR CCA 90 bp GGGCATTATCCCAGGCCCACAGGCACGTGCAATCACACACACACGTaGACATGCCACTGCGCACCTAAGACACACACACACACACACATG +
Preference number: 1 (lower is better)
Translates to: GHYPRPTGTCNHTHT*TCHCAPKTHTHTHM
Trigger: CATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGTGTGATTGCACGTGCCTGTGGGCCTGGGATAATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 90 bp CCACTACGCCCGGCCCTCCAACTTTGCTCCTCTGTGTTTATAAGCTaGGTTCCCTTCAAAGGTGGGATTCTGAGGAGCCTCATCTGCCCC +
Preference number: 1 (lower is better)
Translates to: PLRPALQLCSSVFIS*VPFKGGILRSLICP
Trigger: GGGGCAGATGAGGCTCCTCAGAATCCCACCTTTGAAGGGAACTCAGCTTATAAACACAGAGGAGCAAAGTTGGAGGGCCGGGCGTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR TCA 90 bp TCACAGATGAGTCACGAAGGAACCTTCCGCAGGACTGACCTGTGCTaGCTTCCAACCCGACCCTGTTGCAAAAGCATGGGTGAGCTAGAG +
Preference number: 1 (lower is better)
Translates to: SQMSHEGTFRRTDLC*LPTRPCCKSMGELE
Trigger: CTCTAGCTCACCCATGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTTCGTGACTCATCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR GCA 90 bp CACTGTAAACATCAGGCTCAAAGGCCCATCCAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: HCKHQAQRPIQETKG*RCLHITAQVTLSLA
Trigger: AGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGGATGGGCCTTTGAGCCTGATGTTTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 90 bp TATCCCAGGCCCACAGGCACGTGCAATCACACACACACGTGGACATaGCACTGCGCACCTAAGACACACACACACACACACATGCATATG +
Preference number: 1 (lower is better)
Translates to: YPRPTGTCNHTHTWT*HCAPKTHTHTHMHM
Trigger: CATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGTGTGATTGCACGTGCCTGTGGGCCTGGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTaGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: SRGHHGLTPSPFASC*QVIRNNMDFLQLLE
Trigger: CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 90 bp CTGTTGTCATCTGTTGACCACAAACACGTTTACTGTGCACACTTGTaGACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGT +
Preference number: 1 (lower is better)
Translates to: LLSSVDHKHVYCAHL*TWVSSVSPDMHRAG
Trigger: ACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGACAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CCA 90 bp TCATCTGTTGACCACAAACACGTTTACTGTGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGC +
Preference number: 1 (lower is better)
Translates to: SSVDHKHVYCAHLCT*VSSVSPDMHRAGEC
Trigger: GCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 90 bp TTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTGTGCACACTTGTGCACATGGGTGAG +
Preference number: 1 (lower is better)
Translates to: LQHKTLGGRTAVVIC*PQTRLLCTLVHMGE
Trigger: CTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATaGATATGCACACACACACATATGCACACACACACACAGACACTG +
Preference number: 1 (lower is better)
Translates to: RGHATAHLRHTHTHT*ICTHTHMHTHTQTL
Trigger: CAGTGTCTGTGTGTGTGTGTGCATATGTGTGTGTGTGCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp GGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCCTGGAGGCAGACGCTaGAGGGCTGGGCTCCGCCTC +
Preference number: 2 (lower is better)
Translates to: GPAGCVAGAHCIVPTCSPPGGRR*RAGLRL
Trigger: GAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCCAGG...GGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR CCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCGCCCGCCTCGGCTCTaGCCGCAGAAGGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSRPPRL*PQKEGS
Trigger: GCTTCCTTCCTTCTGCGGCCAGAGCCGAGGCGGGCG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR CCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGCAGACGCTGGAGGGCTaGGCTCCGCCTCAGTCACAG +
Preference number: 2 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVQTLEG*APPQSQ
Trigger: CTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTCTG...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR TCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGACATGCACAGGGCAGGTaGATGCATGGAGTACCATGG +
Preference number: 2 (lower is better)
Translates to: GLGSASVTGNALIPQSPGHAQGR*MHGVPW
Trigger: CCATGGTACTCCATGCATTCACCTGCCCTGTGCATG...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR TCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGTGCCCAGGCTGTCGCTaGCGATTGATGTTCTCACCC +
Preference number: 2 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGCPGCR*RLMFSP
Trigger: GGGTGAGAACATCAATCGTCAGCGACAGCCTGGGCA...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR CAA 90 bp GAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTaGTCTCTGGCTCAGGGCCCAGTGGCCTGGCCAGCTCTGGACATC +
Preference number: 2 (lower is better)
Translates to: ETKGCRCLHITAQVT*SLAQGPVAWPALDI
Trigger: GATGTCCAGAGCTGGCCAGGCCACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CAA 90 bp GCACATCTGGACCCAAGAGTCCCTAGGGTGCAGGTGCACGGGGTGTaGAGGGCTGCGCCTGCTCCGTGCAGAAGCTGTGTTTCCACTCTT +
Preference number: 2 (lower is better)
Translates to: AHLDPRVPRVQVHGV*RAAPAPCRSCVSTL
Trigger: AAGAGTGGAAACACAGCTTCTGCACGGAGCAGGCGCAGCCCTCAACACCCCGTGCACCTGCACCCTAGGGACTCTTGGGTCCAGATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR TCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGACATCACAGCCCAGGTaGCCTTGTCTCTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQTSQPR*PCLWLR
Trigger: CCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGT...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR TCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCACAGGCAATGCCCTaGTCCCACAAAGCCCCGGAG +
Preference number: 2 (lower is better)
Translates to: GCVPYTGDIANFPQVCHASQAMP*SHKAPE
Trigger: CTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGA...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGAHLCT*VSSVSP
Trigger: TGGACTCACGGAGCTCACCCATGTGCACAAGTGTGC...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR TCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGACATCACAGCCCAGGTaGCCTTGTCTCTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVTSQPR*PCLWLR
Trigger: CCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGT...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR TCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCCATGCACAGGGCAGGTaGATGCATGGAGTACCATGG +
Preference number: 2 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAHAQGR*MHGVPW
Trigger: CCATGGTACTCCATGCATTCACCTGCCCTGTGCATG...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGTACTGTGCACACTTGTaGACATGGGTGAGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQYCAHL*TWVSSV
Trigger: CACGGAGCTCACCCATGTGCACAAGTGTGCACAGTA...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAAHLCT*VSSVSP
Trigger: TGGACTCACGGAGCTCACCCATGTGCACAAGTGTGC...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CAA 90 bp CCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTaGCAGCTCCTGGAGGCAGACGCTGGAGGGCTGGGCTCCGCCTCA +
Preference number: 2 (lower is better)
Translates to: PFASCWQVIRNNMDF*QLLEADAGGLGSAS
Trigger: TGAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp GCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATACGTGGACATGCCACTaGGCACCTAAGACACACACA +
Preference number: 2 (lower is better)
Translates to: AGCVAGAHCIVPTCSPLHTWTCH*APKTHT
Trigger: TGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGT...ATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR GCA 90 bp GCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATCGTTTATTGAGGGTCTaGTCTGGGCTGCGTACCGTA +
Preference number: 2 (lower is better)
Translates to: AGCVAGAHCIVPTCSPLHRLLRV*SGLRTV
Trigger: TACGGTACGCAGCCCAGAGCAGACCCTCAATAAACG...ATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR CCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGCAGACGCTaGAGGGCTGGGCTCCGCCTC +
Preference number: 2 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAAPGGRR*RAGLRL
Trigger: GAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCCAGG...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACA +
Preference number: 2 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTQETKG*RCLHIT
Trigger: TGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTACACACACGTGGACATaGCACTGCGCACCTAAGACA +
Preference number: 2 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPTHTWT*HCAPKT
Trigger: TGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGT...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTACTGTGCACACTTGTaGACATGGGTGAGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPYCAHL*TWVSSV
Trigger: CACGGAGCTCACCCATGTGCACAAGTGTGCACAGTA...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCTTCCCGAGGTCACCATaGGCTCACTCCATCCCCTTT +
Preference number: 2 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFFPRSP*AHSIPF
Trigger: AAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGAA...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR TCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTCATGCACAGGGCAGGTaGATGCATGGAGTACCATGG +
Preference number: 2 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVHAQGR*MHGVPW
Trigger: CCATGGTACTCCATGCATTCACCTGCCCTGTGCATG...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp CCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAAAAGCAACGTGGACATGCCACTaGGCACCTAAGACACACACA +
Preference number: 2 (lower is better)
Translates to: PSAGLTCADFQPDPVAKATWTCH*APKTHT
Trigger: TGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGT...TGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR GCA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCACACACACGTGGACATaGCACTGCGCACCTAAGACA +
Preference number: 2 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISTHTWT*HCAPKT
Trigger: TGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGT...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp AAGGAACCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAATGCATGGAGTACCATaGGCATTATCCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: KEPSAGLTCADFQPDPVAMHGVP*ALSQAH
Trigger: GTGGGCCTGGGATAATGCCCATGGTACTCCATGCAT...TGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR GCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGACACACACGTGGACATaGCACTGCGCACCTAAGACA +
Preference number: 2 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRTHTWT*HCAPKT
Trigger: TGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGAATGCATGGAGTACCATaGGCATTATCCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRMHGVP*ALSQAH
Trigger: GTGGGCCTGGGATAATGCCCATGGTACTCCATGCAT...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp GCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATAGAAATCTTGGTTGGTaGGGAGCTGTTTCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: AGCVAGAHCIVPTCSPLHRNLGW*GAVSKR
Trigger: TCTCTTGGAAACAGCTCCCCACCAACCAAGATTTCT...ATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR CAA 90 bp CGGCTGTTGTCATCTGTTGACCACAAACACGTTTACTGTGCACACTaGTGCACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: RLLSSVDHKHVYCAH*CTWVSSVSPDMHRA
Trigger: TGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CAA 90 bp TTCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTaGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: FPRSPWAHSIPFRFL*AGDKEQYGLLAAPG
Trigger: TCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR TCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTG +
Preference number: 2 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPAVVIC*PQTRLL
Trigger: CAGTAAACGTGTTTGTGGTCAACAGATGACAACAGC...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAACAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACA +
Preference number: 2 (lower is better)
Translates to: NALIPQSPGDAVDQLATQQETKG*RCLHIT
Trigger: TGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTG...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCCAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACA +
Preference number: 2 (lower is better)
Translates to: RGHATAHLRHTHTHTCICQETKG*RCLHIT
Trigger: TGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTG...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGCTCAGTCACAGGCAATaGCCTGATCCCACAAAGCCC +
Preference number: 2 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLELSHRQ*PDPTKP
Trigger: GGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAG...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGCCTTTCGCTTCCTGTTaGCAGGTGATAAGGAACAAT +
Preference number: 2 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRPFASC*QVIRNN
Trigger: ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGG...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR TCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTG +
Preference number: 2 (lower is better)
Translates to: NALIPQSPGDAVDQLATQAVVIC*PQTRLL
Trigger: CAGTAAACGTGTTTGTGGTCAACAGATGACAACAGC...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR GCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCACAGGGCAGGTGAATaGATGGAGTACCATGGGCAT +
Preference number: 2 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAAHRAGE*MEYHGH
Trigger: ATGCCCATGGTACTCCATGCATTCACCTGCCCTGTG...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CAA 90 bp CTACTATGTGCCAGGCTGGGACTAAAGGCAGTGAACAAAATAGAGTaGCTGGCCTGGTATAACTTGTGTTTTATCTTTATCTTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: LLCARLGLKAVNKIE*LAWYNLCFIFIFVS
Trigger: GGAAACAAAGATAAAGATAAAACACAAGTTATACCAGGCCAGCAACTCTATTTTGTTCACTGCCTTTAGTCCCAGCCTGGCACATAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR TCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAAGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTG +
Preference number: 2 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKAVVIC*PQTRLL
Trigger: CAGTAAACGTGTTTGTGGTCAACAGATGACAACAGC...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR CCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAAAAAAGAAATCTTGGTTaGTGGGGAGCTGTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKKRNLG*WGAVSK
Trigger: CTTGGAAACAGCTCCCCACCAACCAAGATTTCTTTT...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR TCA 72 bp GACGGCCCCGCGGGTGCCCAGGCTGTCGCTGACGATTaGTGTTCTCACCCCCGCCCGCCTCGGCTCTGGCCG +
Preference number: 3 (lower is better)
Translates to: DGPAGAQAVADD*CSHPRPPRLWP
Trigger: CGGCCAGAGCCGAGGCGGGCGGGGGTGAGAACATCAATCGTCAGCGACAGCCTGGGCACCCGCGGGGCCGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR GCA 72 bp CGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATaGCCTGATCCCACAAAGCCCCGGAGATGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: RWRAGLRLSHRQ*PDPTKPRRCCG
Trigger: TCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp GAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTaGTCCCACAAAGCCCCGGAGATGCTGTGGACCAAC +
Preference number: 3 (lower is better)
Translates to: EGWAPPQSQAMP*SHKAPEMLWTN
Trigger: GTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp CGCCCGCCTCGGCTCTGGCCGCAGAAGGAAGGAAGCTaGCGTTTATTGAGGGTCTGCTCTGGGCTGCGTACC +
Preference number: 3 (lower is better)
Translates to: RPPRLWPQKEGS*RLLRVCSGLRT
Trigger: GGTACGCAGCCCAGAGCAGACCCTCAATAAACGTCAGCTTCCTTCCTTCTGCGGCCAGAGCCGAGGCGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR GCA 72 bp GTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTaGATAGTTCCAACCTGCAGCCCCCTCCATGAGTGC +
Preference number: 3 (lower is better)
Translates to: VGGPAGCVAGAH*IVPTCSPLHEC
Trigger: GCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR GCA 72 bp CAGGTGCACGGGGTGTTGAGGGCTGCGCCTGCTCCGTaGAGAAGCTGTGTTTCCACTCTTGTGCTCCCATCC +
Preference number: 3 (lower is better)
Translates to: QVHGVLRAAPAP*RSCVSTLVLPS
Trigger: GGATGGGAGCACAAGAGTGGAAACACAGCTTCTGCACGGAGCAGGCGCAGCCCTCAACACCCCGTGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR CCA 72 bp GAGCCTGTGGCTCAGGTGGCACCCACAGGTGGCTCCTaGAACCTGTTGCCCCCAAGAAGGTGTGAAAACCAC +
Preference number: 3 (lower is better)
Translates to: EPVAQVAPTGGS*NLLPPRRCENH
Trigger: GTGGTTTTCACACCTTCTTGGGGGCAACAGGTTCCAGGAGCCACCTGTGGGTGCCACCTGAGCCACAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR CAA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAATGCTGTGGACCAACTaGCAACACAAGACCCTAGGA +
Preference number: 3 (lower is better)
Translates to: GLGSASVTGNALIPQSPGMLWTN*QHKTLG
Trigger: TCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCAT...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp CTGACTTCCAACCCGACCCTGTTGCAAAAGCATGGGTaGGCTAGAGCTGGCTCCTCCAGCACAGCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LTSNPTLLQKHG*ARAGSSSTALQ
Trigger: CTGCAGGGCTGTGCTGGAGGAGCCAGCTCTAGCTCACCCATGCTTTTGCAACAGGGTCGGGTTGGAAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR CAA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTACAGCCCAGGTGACCTaGTCTCTGGCTCAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVTAQVT*SLAQGP
Trigger: TGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGT...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CAA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAACAGCCCAGGTGACCTaGTCTCTGGCTCAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: NALIPQSPGDAVDQLATQTAQVT*SLAQGP
Trigger: TGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGT...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CAA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGTTTACTGTGCACACTaGTGCACATGGGTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTVYCAH*CTWVSS
Trigger: GGAGCTCACCCATGTGCACAAGTGTGCACAGTAAAC...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp GGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTaGATGCATGGAGTACCATGGGCATTATCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: GELRESRHAQGR*MHGVPWALSQA
Trigger: GGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CAA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCATGCTGTGGACCAACTaGCAACACAAGACCCTAGGA +
Preference number: 3 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAMLWTN*QHKTLG
Trigger: TCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCAT...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 72 bp CATCAGGCTCAAAGGCCCATCCAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACAGCCCAGGTGACCTTG +
Preference number: 3 (lower is better)
Translates to: HQAQRPIQETKG*RCLHITAQVTL
Trigger: CAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGGATGGGCCTTTGAGCCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 72 bp AGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATaGATGGAGTACCATGGGCATTATCCCAGGCCCACA +
Preference number: 3 (lower is better)
Translates to: SSVSPDMHRAGE*MEYHGHYPRPT
Trigger: TGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR-3UTR CAA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCCCCTTTCGCTTCCTGTaGGCAGGTGATAAGGAACAA +
Preference number: 3 (lower is better)
Translates to: PHCLDKETLAQRGEATWLPFRFL*AGDKEQ
Trigger: TTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp AGTCACGAAGGAACCTTCCGCAGGACTGACCTGTGCTaGCTTCCAACCCGACCCTGTTGCAAAAGCATGGGT +
Preference number: 3 (lower is better)
Translates to: SHEGTFRRTDLC*LPTRPCCKSMG
Trigger: ACCCATGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTTCGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR-3UTR CAA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGAGAGGGAGGACGGCTGTaGTCATCTGTTGACCACAAA +
Preference number: 3 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTREGGRL*SSVDHK
Trigger: TTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTC...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp TTCACAGATGAGTCACGAAGGAACCTTCCGCAGGACTaGCCTGTGCTGACTTCCAACCCGACCCTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: FTDESRRNLPQD*PVLTSNPTLLQ
Trigger: TTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTTCGTGACTCATCTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR GCA 72 bp GGCACGTGCAATCACACACACACGTGGACATGCCACTaGGCACCTAAGACACACACACACACACACATGCAT +
Preference number: 3 (lower is better)
Translates to: GTCNHTHTWTCH*APKTHTHTHMH
Trigger: ATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGTGTGATTGCACGTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CCA 72 bp GACCACAAACACGTTTACTGTGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCA +
Preference number: 3 (lower is better)
Translates to: DHKHVYCAHLCT*VSSVSPDMHRA
Trigger: TGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CCA 72 bp GAAGGAAGGAAGCTGACGTTTATTGAGGGTCTGCTCTaGGCTGCGTACCGTACACGGGTGACATCGCCAATT +
Preference number: 3 (lower is better)
Translates to: EGRKLTFIEGLL*AAYRTRVTSPI
Trigger: AATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAATAAACGTCAGCTTCCTTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR-3UTR CAA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGTTTACTGTGCACACTaGTGCACATGGGTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEVYCAH*CTWVSS
Trigger: GGAGCTCACCCATGTGCACAAGTGTGCACAGTAAAC...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp AAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTGTGCACACTTGTGCAC +
Preference number: 3 (lower is better)
Translates to: KTLGGRTAVVIC*PQTRLLCTLVH
Trigger: GTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR GCA 72 bp TCTGTTGACCACAAACACGTTTACTGTGCACACTTGTaGACATGGGTGAGCTCCGTGAGTCCAGACATGCAC +
Preference number: 3 (lower is better)
Translates to: SVDHKHVYCAHL*TWVSSVSPDMH
Trigger: GTGCATGTCTGGACTCACGGAGCTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CCA 72 bp CACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTaGCAGGTGATAAGGAACAATATGGACTTCTTGCAG +
Preference number: 3 (lower is better)
Translates to: HHGLTPSPFASC*QVIRNNMDFLQ
Trigger: CTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR TCA 72 bp CATCCACCCTCCTACCTACTAATCCCTCCTTTCAGGTaGGCCAGCTCTTGTCTCCAACTTTTATTTTTAAGA +
Preference number: 3 (lower is better)
Translates to: HPPSYLLIPPFR*ASSCLQLLFLR
Trigger: TCTTAAAAATAAAAGTTGGAGACAAGAGCTGGCTCACCTGAAAGGAGGGATTAGTAGGTAGGAGGGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAACCTGGAGGCAGACGCTaGAGGGCTGGGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQPGGRR*RAGLRL
Trigger: GAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCCAGG...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAAGCCACGCGGCATGCTaGCTCCCACGGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLGSASVTGNALIPQSPGSHAAC*LPRAFC
Trigger: ACAGAAGGCCCGTGGGAGTCAGCATGCCGCGTGGCT...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCCTCTAGGCCTGGGCTaGGCTCCAGGCCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSPLGLG*APGQHP
Trigger: TGGATGCTGGCCTGGAGCCCAGCCCAGGCCTAGAGG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGACTCCTAGCCCAGGGCTaGCAGCTGAGACACAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLGSASVTGNALIPQSPGLLAQG*QLRHSH
Trigger: GTGGCTGTGTCTCAGCTGGCAGCCCTGGGCTAGGAG...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGCGGGGTGTTGAGGGCTaGGCCTGCTCCGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGRGVEG*ACSVQK
Trigger: CTTCTGCACGGAGCAGGCGCAGCCCTCAACACCCCG...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGTTGTGGGCCGACCTGTaGAGGCTGCAGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGLWADL*RLQEVA
Trigger: GGCCACCTCCTGCAGCCTCCACAGGTCGGCCCACAA...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCCCTGGAGGCAGACGCTaGAGGGCTGGGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAPGGRR*RAGLRL
Trigger: GAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCCAGG...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGGCCAGTGGGTCTGTCTaGGGCCGCTGGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: RLQVSSHHSPGDLVSGSGASGSV*GRWLPP
Trigger: GGGTGGCAGCCAGCGGCCTCAGACAGACCCACTGGC...CCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR TCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGTGCTGGGGGCAGTCTaGTGGGCTTCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTVLGAV*WASGGG
Trigger: GCCACCCCCAGAAGCCCATCAGACTGCCCCCAGCAC...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR TCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCCTTGTACAGGGGCATaGAGAACCGCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSPCTGA*RTAQGW
Trigger: CCAGCCCTGAGCGGTTCTTCATGCCCCTGTACAAGG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCCCAGGCTGGAGCCAGTaGAGGGTGCACCCACCCATT +
Preference number: 4 (lower is better)
Translates to: GLRLSHRQCPDPTKPRRCPGWSQ*RVHPPI
Trigger: AATGGGTGGGTGCACCCTTCACTGGCTCCAGCCTGG...GCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCAGGGCTGCCAGCTaGGACACAGCCACAGGACAG +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQPRAAS*DTATGQ
Trigger: CTGTCCTGTGGCTGTGTCTCAGCTGGCAGCCCTGGG...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCGTCCCCGGGGCTGGTaGAGTCACACTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTRPRGW*SHTPQG
Trigger: GCCCTGTGGAGTGTGACTTCACCAGCCCCGGGGACG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAAGCCACGCGGCATGCTaGCTCCCACGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGSHAAC*LPRASA
Trigger: GGCAGAGGCCCGTGGGAGTCAGCATGCCGCGTGGCT...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR TCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGAGCCACGCGGCATGCTaGCTCCCACGGGCCATCCGA +
Preference number: 4 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVSHAAC*LPRAIR
Trigger: TCGGATGGCCCGTGGGAGTCAGCATGCCGCGTGGCT...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS-3UTR CCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAATGTACACCTCCAGGGTaGAGGGCACCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQCTPPG*RAPLGS
Trigger: GGAGCCCAGAGGTGCCCTCCACCCTGGAGGTGTACA...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGGACACCAGGCCGTATaGCCGATCCCTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GLGSASVTGNALIPQSPGGHQAV*PIPLLT
Trigger: AGTGAGGAGAGGGATCGGCCATACGGCCTGGTGTCC...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCCTCTAGGCCTGGGCTaGGCTCCAGGCCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLPLGLG*APGQHP
Trigger: TGGATGCTGGCCTGGAGCCCAGCCCAGGCCTAGAGG...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCGCCCGCCTCGGCTCTaGCCGCAGAAGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTRPPRL*PQKEGS
Trigger: GCTTCCTTCCTTCTGCGGCCAGAGCCGAGGCGGGCG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR CAA 72 bp GACCCAAGAGTCCCTAGGGTGCAGGTGCACGGGGTGTaGAGGGCTGCGCCTGCTCCGTGCAGAAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: DPRVPRVQVHGV*RAAPAPCRSCV
Trigger: AACACAGCTTCTGCACGGAGCAGGCGCAGCCCTCAACACCCCGTGCACCTGCACCCTAGGGACTCTTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTGTGCTGGGGGCAGTCTaGTGGGCTTCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSVLGAV*WASGGG
Trigger: GCCACCCCCAGAAGCCCATCAGACTGCCCCCAGCAC...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR TCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCACCCACCCATTTCTTaGAGTCTCCGCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSHPPIS*SLRCSP
Trigger: AGGGCTGCAGCGGAGACTTCAAGAAATGGGTGGGTG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCACATCACAGCCCAGGTaGCCTTGTCTCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSTSQPR*PCLWLR
Trigger: CCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGT...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTAGGTGCACGGGGTGTTaGGGGCTGCGCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPRCTGC*GLRLLR
Trigger: ACGGAGCAGGCGCAGCCCTCAACACCCCGTGCACCT...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCGGCCGCAGCAGGGATaGACGGGCCGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPRPQQG*TGRRQT
Trigger: TGTCTGTCTGCGGCCCGTGCATCCCTGCTGCGGCCG...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR GCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCCGACCTGTGGAGGCTaGAGGAGGTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTPTCGG*RRWPRP
Trigger: AGGACGAGGCCACCTCCTGCAGCCTCCACAGGTCGG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCACACTCCACAGGGCTaGTGCAGTCAGAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSHTPQG*CSQSPQ
Trigger: TTGTGGGCTCTGACTGCAGCAGCCCTGTGGAGTGTG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCTGATGACGGGCAGCTaGGCCTCCAGGCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTLMTGS*ASRQVS
Trigger: GGACACCTGCCTGGAGGCCCAGCTGCCCGTCATCAG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp GGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCGGAGGCTGCAGGAGGTaGCCTCGTCCTTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GLRLSHRQCPDPTKPRRCGGCRR*PRPSAL
Trigger: AAGAGCTGAAGGACGAGGCCACCTCCTGCAGCCTCC...GCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGGCATGCGTGGCATTGTaGGCCGACCTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQACVAL*ADLWRL
Trigger: CAGCCTCCACAGGTCGGCCCACAATGCCACGCATGC...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCGGGCTCCGTGGTGGGTaGCAGCTGTACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAGLRGG*QLYTSR
Trigger: CCTGGAGGTGTACAGCTGCCACCCACCACGGAGCCC...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAATCCAGGTCCAGGGCTaGGTAGCCGTCATCCTCACA +
Preference number: 4 (lower is better)
Translates to: GLGSASVTGNALIPQSPGIQVQG*VAVILT
Trigger: TGTGAGGATGACGGCTACCCAGCCCTGGACCTGGAT...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGAGCCAGTGGGTCTGTCTaGGGCCGCTGGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRASGSV*GRWLPP
Trigger: GGGTGGCAGCCAGCGGCCTCAGACAGACCCACTGGC...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR TCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCCCAGGCTGGAGCCAGTaGAGGGTGCACCCACCCATT +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAPGWSQ*RVHPPI
Trigger: AATGGGTGGGTGCACCCTTCACTGGCTCCAGCCTGG...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCGTCCCCGGGGCTGGTaGAGTCACACTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFRPRGW*SHTPQG
Trigger: GCCCTGTGGAGTGTGACTTCACCAGCCCCGGGGACG...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCACATCACAGCCCAGGTaGCCTTGTCTCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLRLSHRQCPDPTKPRRCTSQPR*PCLWLR
Trigger: CCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGT...GCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGTCACAGGCAATGCCCTaGTCCCACAAAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLSQAMP*SHKAPE
Trigger: CTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGA...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCGCTGTCGCTGACGATTaGTGTTCTCACCCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAAVADD*CSHPRP
Trigger: CGGGCGGGGGTGAGAACATCAATCGTCAGCGACAGC...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAATGCCCAGGCTGTCGCTaGCGATTGATGTTCTCACCC +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQCPGCR*RLMFSP
Trigger: GGGTGAGAACATCAATCGTCAGCGACAGCCTGGGCA...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCTGAGGCCGCTGGCTaGCACCCAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPSEAAG*HPAACA
Trigger: TGCACATGCGGCTGGGTGGCAGCCAGCGGCCTCAGA...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR GCA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCCCGACCTGTGGAGGCTaGAGGAGGTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PHCLDKETLAQRGEATWLPTCGG*RRWPRP
Trigger: AGGACGAGGCCACCTCCTGCAGCCTCCACAGGTCGG...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGACAGCCAGGAGAAAGCTaGCACACTCCTGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GLGSASVTGNALIPQSPGQPGES*HTPGSS
Trigger: ACTACTCCCAGGAGTGTGGCAGCTTTCTCCTGGCTG...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCCAGGACTGTGGTCCCTaGATCCAAGAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLRLSHRQCPDPTKPRRCQDCGP*IQEWVL
Trigger: GAGGACCCACTCTTGGATGCAGGGACCACAGTCCTG...GCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTGGAGGGGGTACCTGCTaGTTCTGCCTGCCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTGGGTC*FCLPGV
Trigger: GACGCCGGGCAGGCAGAAGCAGCAGGTACCCCCTCC...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR CCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATCTGGGGGTGGCAGCTaGGTTCAGCGTGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGSGGGS*VQRGGD
Trigger: GTCACCCCCACGCTGAACCCAGCTGCCACCCCCAGA...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTTTGTGGGCCGACCTGTaGAGGCTGCAGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSLWADL*RLQEVA
Trigger: GGCCACCTCCTGCAGCCTCCACAGGTCGGCCCACAA...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGGGACACCAGGCCGTATaGCCGATCCCTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLGHQAV*PIPLLT
Trigger: AGTGAGGAGAGGGATCGGCCATACGGCCTGGTGTCC...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAATCCAGGGCTCGAAAGTaGCGGAGGAATGACCACCCA +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQSRARK*RRNDHP
Trigger: TGGGTGGTCATTCCTCCGCCACTTTCGAGCCCTGGA...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCAGACGCTGGAGGGCTaGGCTCCGCCTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPQTLEG*APPQSQ
Trigger: CTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTCTG...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCCCAGGGCTGCCAGCTaGGACACAGCCACAGGACAG +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVPRAAS*DTATGQ
Trigger: CTGTCCTGTGGCTGTGTCTCAGCTGGCAGCCCTGGG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTCCCAGGGCTGCCAGCTaGGACACAGCCACAGGACAG +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTPRAAS*DTATGQ
Trigger: CTGTCCTGTGGCTGTGTCTCAGCTGGCAGCCCTGGG...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTCGTCCCCGGGGCTGGTaGAGTCACACTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPRPRGW*SHTPQG
Trigger: GCCCTGTGGAGTGTGACTTCACCAGCCCCGGGGACG...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAACCCCACTTCACAGATaGGTCACGAAGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: GLGSASVTGNALIPQSPGTPLHR*VTKEPS
Trigger: GGAAGGTTCCTTCGTGACTCATCTGTGAAGTGGGGT...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCCATAGCTCGAGTCTTTaGGGAACTCCAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLRLSHRQCPDPTKPRRCHSSSL*GTPGGG
Trigger: TCCTCCCCCTGGAGTTCCGCAAAGACTCGAGCTATG...GCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGCCAGGCATGGGCCCTaGCCGCACCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVARHGP*PHLQLI
Trigger: TATGAGCTGCAGGTGCGGGCAGGGCCCATGCCTGGC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGCCAGGCATGGGCCCTaGCCGCACCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRARHGP*PHLQLI
Trigger: TATGAGCTGCAGGTGCGGGCAGGGCCCATGCCTGGC...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCGGAGCCAGTGAAGGGTaGACCCACCCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSGASEG*THPFLE
Trigger: TTCAAGAAATGGGTGGGTGCACCCTTCACTGGCTCC...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAGCAGAGAGACGCCAGTaGGTCTGTCTGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGAERRQ*VCLRPL
Trigger: CAGCGGCCTCAGACAGACCCACTGGCGTCTCTCTGC...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGACAGACACAGCTGCGTaGCTGTCAGCCACACTCAGG +
Preference number: 4 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLTDTAA*LSATLR
Trigger: CCTGAGTGTGGCTGACAGCCACGCAGCTGTGTCTGT...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGAGTCTGATGGGCTTCTaGGGGTGGCAGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQSLMGF*GWQLGS
Trigger: TGAACCCAGCTGCCACCCCCAGAAGCCCATCAGACT...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGGAGGCTGCAGGAGGTaGCCTCGTCCTTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGCVAGAHCIVPTCSPLHGGCRR*PRPSAL
Trigger: AAGAGCTGAAGGACGAGGCCACCTCCTGCAGCCTCC...ATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAGCATGCGTGGCATTGTaGGCCGACCTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGACVAL*ADLWRL
Trigger: CAGCCTCCACAGGTCGGCCCACAATGCCACGCATGC...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTTGTACACCTCCAGGGTaGAGGGCACCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSCTPPG*RAPLGS
Trigger: GGAGCCCAGAGGTGCCCTCCACCCTGGAGGTGTACA...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCTTGGCCGGGCTCCGTaGTGGGTGGCAGCTGTACAC +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVLGRAP*WVAAVH
Trigger: GTGTACAGCTGCCACCCACCACGGAGCCCGGCCAAG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCGCCAGAAGCTGGGCTTaGGCACACCGTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAARSWA*AHRQTP
Trigger: TGGAGTCTGACGGTGTGCCCAAGCCCAGCTTCTGGC...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAGTCAGCCTCATTAGCTaGCCTGGGGTCCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGVSLIS*PGVQGS
Trigger: CGAGCCCTGGACCCCAGGCCAGCTAATGAGGCTGAC...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCAGACGCTGGAGGGCTaGGCTCCGCCTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVQTLEG*APPQSQ
Trigger: CTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTCTG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAACCTGGAGGCAGACGCTaGAGGGCTGGGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NALIPQSPGDAVDQLATQPGGRR*RAGLRL
Trigger: GAGGCGGAGCCCAGCCCTCCAGCGTCTGCCTCCAGG...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGTTCCCGAGGTCACCATaGGCTCACTCCATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGFPRSP*AHSIPF
Trigger: AAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGAA...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACGCCCGCCTCGGCTCTaGCCGCAGAAGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRRPPRL*PQKEGS
Trigger: GCTTCCTTCCTTCTGCGGCCAGAGCCGAGGCGGGCG...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGAGAGCCCTAGGGATGTaGAGGGGGTACCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQRALGM*RGYLLL
Trigger: AAGCAGCAGGTACCCCCTCCACATCCCTAGGGCTCT...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR CCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTGCTCATGGGGTCACCTaGCTTGACTGCCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPAHGVT*LDCPTC
Trigger: GCAGGTCGGGCAGTCAAGCCAGGTGACCCCATGAGC...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS-3UTR TCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCCTTGTACAGGGGCATaGAGAACCGCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPPCTGA*RTAQGW
Trigger: CCAGCCCTGAGCGGTTCTTCATGCCCCTGTACAAGG...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGTCAAAGGTGGGATTCTaGGGAGCCTCATCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQSKVGF*GASSAP
Trigger: TGGGGCAGATGAGGCTCCTCAGAATCCCACCTTTGA...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTCCGACCTGTGGAGGCTaGAGGAGGTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVPTCGG*RRWPRP
Trigger: AGGACGAGGCCACCTCCTGCAGCCTCCACAGGTCGG...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAGGAGCCAGTGAAGGGTaGACCCACCCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQGASEG*THPFLE
Trigger: TTCAAGAAATGGGTGGGTGCACCCTTCACTGGCTCC...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTGTAGCTCCGTGAGCTaGAGCCTCTTGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVCSSVS*SLLAGL
Trigger: GAGCCCGGCCAAGAGGCTGCAGCTCACGGAGCTACA...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGCGTCATCCTCACAGCTaGAGGGCCAGGTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQRHPHS*RARCMA
Trigger: GGCCATGCACCTGGCCCTGCAGCTGTGAGGATGACG...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCAGGACTGTGGTCCCTaGATCCAAGAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTQDCGP*IQEWVL
Trigger: GAGGACCCACTCTTGGATGCAGGGACCACAGTCCTG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGCTCCTAGCCCAGGGCTaGCAGCTGAGACACAGCCAC +
Preference number: 4 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQLLAQG*QLRHSH
Trigger: GTGGCTGTGTCTCAGCTGGCAGCCCTGGGCTAGGAG...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAACACAGGGCAGGTGAATaGATGGAGTACCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQHRAGE*MEYHGH
Trigger: ATGCCCATGGTACTCCATGCATTCACCTGCCCTGTG...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGGGGTCTGCTCTGGGCTaGGTACCGTACACGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEGSALG*VPYTGD
Trigger: GTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCC...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGGGGTCTGCTCTGGGCTaGGTACCGTACACGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGGSALG*VPYTGD
Trigger: GTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCC...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGCCGAGATCGCACCACTaGATTCCAGCCTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGPRSHH*IPAWAT
Trigger: CGTCGCCCAGGCTGGAATGCAGTGGTGCGATCTCGG...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGGTACCTGCTGCTTCTaGCTGCCCGGCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVGTCCF*LPGVSS
Trigger: GGAAGAGACGCCGGGCAGGCAGAAGCAGCAGGTACC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR CCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCTCGTCGGCCATGAAGTaGAATACATCCATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSSSAMK*NTSMWQ
Trigger: CTGCCACATGGATGTATTCCACTTCATGGCCGACGA...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGAGCCTCCACAATGGATaGGTCTTCAGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGSLHNG*VFRLQK
Trigger: CTTCTGGAGCCTGAAGACCCATCCATTGTGGAGGCT...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGGGCTCCGTGGTGGGTaGCAGCTGTACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVGLRGG*QLYTSR
Trigger: CCTGGAGGTGTACAGCTGCCACCCACCACGGAGCCC...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGCTGTCGGCCAGAAGCTaGGCTTGGGCACACCGTCAG +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRLSARS*AWAHRQ
Trigger: CTGACGGTGTGCCCAAGCCCAGCTTCTGGCCGACAG...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTGGACACCAGGCCGTATaGCCGATCCCTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPGHQAV*PIPLLT
Trigger: AGTGAGGAGAGGGATCGGCCATACGGCCTGGTGTCC...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AAGGAACCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAGTCAGCCTCATTAGCTaGCCTGGGGTCCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: KEPSAGLTCADFQPDPVAVSLIS*PGVQGS
Trigger: CGAGCCCTGGACCCCAGGCCAGCTAATGAGGCTGAC...TGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTGGCCTGGCCAGCTCTaGACATCCAGTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAWPGQL*TSSQPH
Trigger: ATGAGGCTGACTGGATGTCCAGAGCTGGCCAGGCCA...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATATTGAGGGTCTGCTCTaGGCTGCGTACCGTACACGG +
Preference number: 4 (lower is better)
Translates to: AGCVAGAHCIVPTCSPLHIEGLL*AAYRTR
Trigger: CCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT...ATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGTTGGCAGGATTGAATTaGGGCAGGGTAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVLAGLN*GRVGGP
Trigger: TGGGCCCCCTACCCTGCCCCAATTCAATCCTGCCAA...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGACCCACAGGTGGCTCCTaGAACCTGTTGCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGPTGGS*NLLPPR
Trigger: TCTTGGGGGCAACAGGTTCCAGGAGCCACCTGTGGG...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTTTTCCTGGGAGCCTGTaGCTCAGGTGGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSFPGSL*LRWHPQ
Trigger: CTGTGGGTGCCACCTGAGCCACAGGCTCCCAGGAAA...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGTACTGCAGCTCATACTaGAGCTTGCCCTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGYCSSY*SLPFSM
Trigger: CATGCTGAAGGGCAAGCTTCAGTATGAGCTGCAGTA...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTCACAGGCAATGCCCTaGTCCCACAAAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTSQAMP*SHKAPE
Trigger: CTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGA...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCTGCAGCCTGCAGTCTaGCCTTTGGGGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISLQPAV*PLGRKT
Trigger: CGTCTTCCTCCCCAAAGGTCAGACTGCAGGCTGCAG...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGCAGCCAGGAGAAAGCTaGCACACTCCTGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVQPGES*HTPGSS
Trigger: ACTACTCCCAGGAGTGTGGCAGCTTTCTCCTGGCTG...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCGCCAGGCATGGGCCCTaGCCGCACCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICARHGP*PHLQLI
Trigger: TATGAGCTGCAGGTGCGGGCAGGGCCCATGCCTGGC...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGTGTAGCTCCGTGAGCTaGAGCCTCTTGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRCSSVS*SLLAGL
Trigger: GAGCCCGGCCAAGAGGCTGCAGCTCACGGAGCTACA...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTAGCTGCAGGGCCAGGTaGATGGCCCCTCTGCATCTA +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTSCRAR*MAPLHL
Trigger: TAGATGCAGAGGGGCCATGCACCTGGCCCTGCAGCT...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCAGCTGCAGGGCCAGGTaGATGGCCCCTCTGCATCTA +
Preference number: 4 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISSCRAR*MAPLHL
Trigger: TAGATGCAGAGGGGCCATGCACCTGGCCCTGCAGCT...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAACAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACA +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQQETKG*RCLHIT
Trigger: TGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTG...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCCCCCCAGGTGTGTCATaGCTTCCCCACTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PHCLDKETLAQRGEATWLPPGVS*LPHCLD
Trigger: ATCCAGACAGTGGGGAAGGCATGACACACCTGGGGG...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCGTTTATTGAGGGTCTaGTCTGGGCTGCGTACCGTA +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQRLLRV*SGLRTV
Trigger: TACGGTACGCAGCCCAGAGCAGACCCTCAATAAACG...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCCGGGAGACAGAGGTTaGAGAGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVPGDRG*REPRSH
Trigger: GTGCGATCTCGGCTCTCTGCAACCTCTGTCTCCCGG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCCTCCAGCACAGCCCTaGAGCCTGCAGTCTGACCTT +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVPPAQP*SLQSDL
Trigger: AAGGTCAGACTGCAGGCTGCAGGGCTGTGCTGGAGG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGCAGGAGAGCTGTGCTaGTTTCCTGGGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRAGELC*FPGSLW
Trigger: CCACAGGCTCCCAGGAAAGCAGCACAGCTCTCCTGC...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGCTGAGGAGCCTCATCTaGCCCAGTCCAGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRLRSLI*PSPESP
Trigger: GGGGGACTCTGGACTGGGGCAGATGAGGCTCCTCAG...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCTTGTGGGCCGACCTGTaGAGGCTGCAGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICLWADL*RLQEVA
Trigger: GGCCACCTCCTGCAGCCTCCACAGGTCGGCCCACAA...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGCATGCGTGGCATTGTaGGCCGACCTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVACVAL*ADLWRL
Trigger: CAGCCTCCACAGGTCGGCCCACAATGCCACGCATGC...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCTGTGGCAGGTGTAGGTaGCATGCGTGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: PHCLDKETLAQRGEATWLCGRCR*HAWHCG
Trigger: CCCACAATGCCACGCATGCCACCTACACCTGCCACA...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCAGAACCGCTCAGGGCTaGGGACGGCCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: PHCLDKETLAQRGEATWLRTAQG*GRPISS
Trigger: AGAAGATATGGGCCGTCCCCAGCCCTGAGCGGTTCT...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCGGGCTCCGTGGTGGGTaGCAGCTGTACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPGLRGG*QLYTSR
Trigger: CCTGGAGGTGTACAGCTGCCACCCACCACGGAGCCC...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCCTTGGCCGGGCTCCGTaGTGGGTGGCAGCTGTACAC +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPLGRAP*WVAAVH
Trigger: GTGTACAGCTGCCACCCACCACGGAGCCCGGCCAAG...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGGCCAGAAGCTGGGCTTaGGCACACCGTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQARSWA*AHRQTP
Trigger: TGGAGTCTGACGGTGTGCCCAAGCCCAGCTTCTGGC...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTATCCAGGTCCAGGGCTaGGTAGCCGTCATCCTCACA +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPIQVQG*VAVILT
Trigger: TGTGAGGATGACGGCTACCCAGCCCTGGACCTGGAT...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCAGGGCTCGAAAGTaGCGGAGGAATGACCACCCA +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPSRARK*RRNDHP
Trigger: TGGGTGGTCATTCCTCCGCCACTTTCGAGCCCTGGA...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCTGGCCTGGCCAGCTCTaGACATCCAGTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PHCLDKETLAQRGEATWLWPGQL*TSSQPH
Trigger: ATGAGGCTGACTGGATGTCCAGAGCTGGCCAGGCCA...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AAGGAACCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAACTTCTTGCAGCTCCTaGAGGCAGACGCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KEPSAGLTCADFQPDPVATSCSS*RQTLEG
Trigger: GCCCTCCAGCGTCTGCCTCCAGGAGCTGCAAGAAGT...TGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCACTTCTTGCAGCTCCTaGAGGCAGACGCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFTSCSS*RQTLEG
Trigger: GCCCTCCAGCGTCTGCCTCCAGGAGCTGCAAGAAGT...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGACTTCTTGCAGCTCCTaGAGGCAGACGCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQTSCSS*RQTLEG
Trigger: GCCCTCCAGCGTCTGCCTCCAGGAGCTGCAAGAAGT...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCGAGGTCACCATaGGCTCACTCCATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAFPRSP*AHSIPF
Trigger: AAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGAA...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGCCACCCAGCAAGCTCTaGGTGCAGGAGAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGPPSKL*VQESCA
Trigger: AGCACAGCTCTCCTGCACCCAGAGCTTGCTGGGTGG...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGACTGGGTCTGAAAGATaGCCGGGTCACTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTTGSER*PGHSIH
Trigger: GTGAATGGAGTGACCCGGTCATCTTTCAGACCCAGT...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGCACCCACCCATTTCTTaGAGTCTCCGCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQHPPIS*SLRCSP
Trigger: AGGGCTGCAGCGGAGACTTCAAGAAATGGGTGGGTG...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGCGTACCGTACACGGGTaGCATCGCCAATTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMERTVHG*HRQFPP
Trigger: TGGGGGAAATTGGCGATGTCACCCGTGTACGGTACG...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGCTGTCGCTGACGATTaGTGTTCTCACCCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: NALIPQSPGDAVDQLATQAVADD*CSHPRP
Trigger: CGGGCGGGGGTGAGAACATCAATCGTCAGCGACAGC...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCATAGCTCGAGTCTTTaGGGAACTCCAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPHSSSL*GTPGGG
Trigger: TCCTCCCCCTGGAGTTCCGCAAAGACTCGAGCTATG...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGCAGGACTGTGGTCCCTaGATCCAAGAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEQDCGP*IQEWVL
Trigger: GAGGACCCACTCTTGGATGCAGGGACCACAGTCCTG...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCCTCCTAGCCCAGGGCTaGCAGCTGAGACACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPLLAQG*QLRHSH
Trigger: GTGGCTGTGTCTCAGCTGGCAGCCCTGGGCTAGGAG...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCTCAGTCACAGGCAATaGCCTGATCCCACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPLSHRQ*PDPTKP
Trigger: GGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAG...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCCCCCAGGTGTGTCATaGCTTCCCCACTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVPPGVS*LPHCLD
Trigger: ATCCAGACAGTGGGGAAGGCATGACACACCTGGGGG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGGGGTCTGCTCTGGGCTaGGTACCGTACACGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTGSALG*VPYTGD
Trigger: GTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCC...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCGTTTATTGAGGGTCTaGTCTGGGCTGCGTACCGTA +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTRLLRV*SGLRTV
Trigger: TACGGTACGCAGCCCAGAGCAGACCCTCAATAAACG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCGTGGCCGGAGCACACTaGATAGTTCCAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFVAGAH*IVPTCS
Trigger: GCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCAC...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACACAGCCCTGCAGCCTaGAGTCTGACCTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRHSPAA*SLTFGE
Trigger: CTCCCCAAAGGTCAGACTGCAGGCTGCAGGGCTGTG...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCGCAGAGAGACGCCAGTaGGTCTGTCTGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPAERRQ*VCLRPL
Trigger: CAGCGGCCTCAGACAGACCCACTGGCGTCTCTCTGC...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGTCTGATGGGCTTCTaGGGGTGGCAGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGSLMGF*GWQLGS
Trigger: TGAACCCAGCTGCCACCCCCAGAAGCCCATCAGACT...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGTGTGGCAGGTGTAGGTaGCATGCGTGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGCGRCR*HAWHCG
Trigger: CCCACAATGCCACGCATGCCACCTACACCTGCCACA...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCTGTACACCTCCAGGGTaGAGGGCACCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICCTPPG*RAPLGS
Trigger: GGAGCCCAGAGGTGCCCTCCACCCTGGAGGTGTACA...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCAGTCACTGTGTCAATaGACACCAGGCCGTATGGCC +
Preference number: 4 (lower is better)
Translates to: RLQVSSHHSPGDLVSGSGQSLCQ*TPGRMA
Trigger: GGCCATACGGCCTGGTGTCCATTGACACAGTGACTG...CCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGATCCAGGTCCAGGGCTaGGTAGCCGTCATCCTCACA +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEIQVQG*VAVILT
Trigger: TGTGAGGATGACGGCTACCCAGCCCTGGACCTGGAT...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCTCCAGGGCTCGAAAGTaGCGGAGGAATGACCACCCA +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFSRARK*RRNDHP
Trigger: TGGGTGGTCATTCCTCCGCCACTTTCGAGCCCTGGA...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCGTCAGCCTCATTAGCTaGCCTGGGGTCCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICVSLIS*PGVQGS
Trigger: CGAGCCCTGGACCCCAGGCCAGCTAATGAGGCTGAC...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTGGCCTGGCCAGCTCTaGACATCCAGTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEWPGQL*TSSQPH
Trigger: ATGAGGCTGACTGGATGTCCAGAGCTGGCCAGGCCA...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGATGCATGGAGTACCATaGGCATTATCCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVMHGVP*ALSQAH
Trigger: GTGGGCCTGGGATAATGCCCATGGTACTCCATGCAT...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGTTGGCAGGATTGAATTaGGGCAGGGTAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGLAGLN*GRVGGP
Trigger: TGGGCCCCCTACCCTGCCCCAATTCAATCCTGCCAA...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCAAACCACAGCACATCTaGACCCAAGAGTCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAKPQHI*TQESLG
Trigger: CCCTAGGGACTCTTGGGTCCAGATGTGCTGTGGTTT...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp AGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGTTTCCAGGATGCAGATaGCCGTCTGGAGGTAATCGG +
Preference number: 4 (lower is better)
Translates to: RLQVSSHHSPGDLVSGSGFPGCR*PSGGNR
Trigger: CCGATTACCTCCAGACGGTCATCTGCATCCTGGAAA...CCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCGATATTATACTGTCCTaGGAAGGTCACAGTCACGTT +
Preference number: 4 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSDIILS*EGHSHV
Trigger: AACGTGACTGTGACCTTCTCAGGACAGTATAATATC...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGGGTCTTCGTAATCTaGGCGCCAGGAGATATTATA +
Preference number: 4 (lower is better)
Translates to: DAGGLGSASVTGNALIPQRVFVI*APGDII
Trigger: TATAATATCTCCTGGCGCTCAGATTACGAAGACCCT...TTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCAGGGTCTTCGTAATCTaGGCGCCAGGAGATATTATA +
Preference number: 4 (lower is better)
Translates to: GPAGCVAGAHCIVPTCSPRVFVI*APGDII
Trigger: TATAATATCTCCTGGCGCTCAGATTACGAAGACCCT...GGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp TCCCGAGGTCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGTACTGCAGCTCATACTaGAGCTTGCCCTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: SRGHHGLTPSPFASCWQVYCSSY*SLPFSM
Trigger: CATGCTGAAGGGCAAGCTTCAGTATGAGCTGCAGTA...CACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTCCTCTGACTGGGTCTaGAAGATGACCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMESSDWV*KMTGSL
Trigger: GAGTGACCCGGTCATCTTTCAGACCCAGTCAGAGGA...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGCCTTGTACAGGGGCATaGAGAACCGCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTPCTGA*RTAQGW
Trigger: CCAGCCCTGAGCGGTTCTTCATGCCCCTGTACAAGG...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCGTTCTTGTAGCTCCGTaGGCTGCAGCCTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPVLVAP*AAASWP
Trigger: CGGCCAAGAGGCTGCAGCTCACGGAGCTACAAGAAC...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAAAGTGGCGGAGGAATaGCCACCCACTGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPKVAEE*PPTGGG
Trigger: ACCTCCGCCAGTGGGTGGTCATTCCTCCGCCACTTT...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGAAAGTGGCGGAGGAATaGCCACCCACTGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTKVAEE*PPTGGG
Trigger: ACCTCCGCCAGTGGGTGGTCATTCCTCCGCCACTTT...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTACATCACAGCCCAGGTaGCCTTGTCTCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPTSQPR*PCLWLR
Trigger: CCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGT...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGCATGCACAGGGCAGGTaGATGCATGGAGTACCATGG +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRHAQGR*MHGVPW
Trigger: CCATGGTACTCCATGCATTCACCTGCCCTGTGCATG...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTG +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGAVVIC*PQTRLL
Trigger: CAGTAAACGTGTTTGTGGTCAACAGATGACAACAGC...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAATCACAGGCAATGCCCTaGTCCCACAAAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NALIPQSPGDAVDQLATQSQAMP*SHKAPE
Trigger: CTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGA...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGCGTACCGTACACGGGTaGCATCGCCAATTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRRTVHG*HRQFPP
Trigger: TGGGGGAAATTGGCGATGTCACCCGTGTACGGTACG...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGGTTCCCCGTGCTTCATaGGAAAGATGCAGCGACAGC +
Preference number: 4 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEVPRAS*ERCSDS
Trigger: GCTGTCGCTGCATCTTTCTCATGAAGCACGGGGAAC...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS-3UTR GCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCGGCCGCAGCAGGGATaGACGGGCCGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAARPQQG*TGRRQT
Trigger: TGTCTGTCTGCGGCCCGTGCATCCCTGCTGCGGCCG...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR GCA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGCAGCCAGGAGAAAGCTaGCACACTCCTGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQQPGES*HTPGSS
Trigger: ACTACTCCCAGGAGTGTGGCAGCTTTCTCCTGGCTG...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGCTGCAGGGCCAGGTaGATGGCCCCTCTGCATCTA +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPSCRAR*MAPLHL
Trigger: TAGATGCAGAGGGGCCATGCACCTGGCCCTGCAGCT...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTCACACTCCACAGGGCTaGTGCAGTCAGAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVHTPQG*CSQSPQ
Trigger: TTGTGGGCTCTGACTGCAGCAGCCCTGTGGAGTGTG...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAACACACACGTGGACATaGCACTGCGCACCTAAGACA +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGTHTWT*HCAPKT
Trigger: TGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGT...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAACAAAGCCCCGGAGATaGTGTGGACCAACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGTKPRR*CGPTCN
Trigger: GTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGT...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTCGTTTATTGAGGGTCTaGTCTGGGCTGCGTACCGTA +
Preference number: 4 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSRLLRV*SGLRTV
Trigger: TACGGTACGCAGCCCAGAGCAGACCCTCAATAAACG...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAAAAGCATGCATAGTTCCAACCTaGAGCCCCCTCCATGAGTGC +
Preference number: 4 (lower is better)
Translates to: PSAGLTCADFQPDPVAKACIVPT*SPLHEC
Trigger: GCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCA...TGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp AGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCAACCCGACCCTGTTaGAAAAGCATGGGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RLQVSSHHSPGDLVSGSGPTRPC*KSMGEL
Trigger: TAGCTCACCCATGCTTTTGCAACAGGGTCGGGTTGG...CCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCAACCTTCCAGCCTCCTaGCAGGCACCGAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICNLPAS*QAPRTL
Trigger: GAGAGTCCTCGGTGCCTGGCAGGAGGCTGGAAGGTT...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGCTGCGCCTGCTCCGTaGAGAAGCTGTGTTTCCACT +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVAAPAP*RSCVST
Trigger: AGTGGAAACACAGCTTCTGCACGGAGCAGGCGCAGC...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGGTTGAGGGCTGCGCCTaGTCCGTGCAGAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTVEGCA*SVQKLC
Trigger: ACACAGCTTCTGCACGGAGCAGGCGCAGCCCTCAAC...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCGGTGCAGGAGAGCTGTaGTGCTTTCCTGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICGAGEL*CFPGSL
Trigger: CAGGCTCCCAGGAAAGCAGCACAGCTCTCCTGCACC...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCCCTGCTGCTTCTGCCTaGCCGGCGTCTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICPAASA*PASLPK
Trigger: TTTGGGAAGAGACGCCGGGCAGGCAGAAGCAGCAGG...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR GCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGACTCCCACGGGCCTCTaGCTACATCACAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRTPTGL*LHHRAL
Trigger: TAGGGCTCTGTGATGTAGGCAGAGGCCCGTGGGAGT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR GCA 90 bp GCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTCTCTCGCAGCCTCATTaGCTCATCTTCTGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: AAYRTRVTSPISPRCVMPLSQPH*LIFCFG
Trigger: GCCGAAACAGAAGATGAGGCAATGAGGCTGCGAGAG...AGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS-3UTR GCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTCCGACCCGTTCCCCGTaGTTCATGAGAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTPTRSP*FMRKMQ
Trigger: CTGCATCTTTCTCATGAAGCACGGGGAACGGGTCGG...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS-3UTR CCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGACAGACACAGCTGCGTaGCTGTCAGCCACACTCAGG +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRTDTAA*LSATLR
Trigger: CCTGAGTGTGGCTGACAGCCACGCAGCTGTGTCTGT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTATCCATTCCGTGTGCTaGGGGCAGTCTGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTIHSVC*GQSDGL
Trigger: AAGCCCATCAGACTGCCCCCAGCACACGGAATGGAT...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTTGTAGGTGGCATGCGTaGCATTGTGGGCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPCRWHA*HCGPTC
Trigger: ACAGGTCGGCCCACAATGCCACGCATGCCACCTACA...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGAGCCTCCACAATGGATaGGTCTTCAGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLQVSSHHSPGDLVSGSGSLHNG*VFRLQK
Trigger: CTTCTGGAGCCTGAAGACCCATCCATTGTGGAGGCT...CCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGAGAACCGCTCAGGGCTaGGGACGGCCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRRTAQG*GRPISS
Trigger: AGAAGATATGGGCCGTCCCCAGCCCTGAGCGGTTCT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATCTGTCGGCCAGAAGCTaGGCTTGGGCACACCGTCAG +
Preference number: 4 (lower is better)
Translates to: HGLTPSPFASCWQVIRNNLSARS*AWAHRQ
Trigger: CTGACGGTGTGCCCAAGCCCAGCTTCTGGCCGACAG...ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGAATTGAGGGTCTGCTCTaGGCTGCGTACCGTACACGG +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRIEGLL*AAYRTR
Trigger: CCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGACTGGGTCTGAAAGATaGCCGGGTCACTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRTGSER*PGHSIH
Trigger: GTGAATGGAGTGACCCGGTCATCTTTCAGACCCAGT...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTTCCTCTGACTGGGTCTaGAAGATGACCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPSSDWV*KMTGSL
Trigger: GAGTGACCCGGTCATCTTTCAGACCCAGTCAGAGGA...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATAAAGTGGCGGAGGAATaGCCACCCACTGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: HGLTPSPFASCWQVIRNNKVAEE*PPTGGG
Trigger: ACCTCCGCCAGTGGGTGGTCATTCCTCCGCCACTTT...ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCTGCCCAGGCTGTCGCTaGCGATTGATGTTCTCACCC +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICCPGCR*RLMFSP
Trigger: GGGTGAGAACATCAATCGTCAGCGACAGCCTGGGCA...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR TCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTAACCTTCCGCAGGACTaGCCTGTGCTGACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVNLPQD*PVLTSN
Trigger: GTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTT...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGATCCCTCCTTTCAGGTaGGCCAGCTCTTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRIPPFR*ASSCLQ
Trigger: TTGGAGACAAGAGCTGGCTCACCTGAAAGGAGGGAT...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCGGAGCCAGTGAAGGGTaGACCCACCCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFGASEG*THPFLE
Trigger: TTCAAGAAATGGGTGGGTGCACCCTTCACTGGCTCC...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGACACACACGTGGACATaGCACTGCGCACCTAAGACA +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGTHTWT*HCAPKT
Trigger: TGTCTTAGGTGCGCAGTGGCATGTCCACGTGTGTGT...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCTACTGTGCACACTTGTaGACATGGGTGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISYCAHL*TWVSSV
Trigger: CACGGAGCTCACCCATGTGCACAAGTGTGCACAGTA...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGACCGGCCCTCCAACTTTaGTCCTCTGTGTTTATAAGC +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGPALQL*SSVFIS
Trigger: GCTTATAAACACAGAGGAGCAAAGTTGGAGGGCCGG...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp ATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCAGTCTGGGGGTGGCAGCTaGGTTCAGCGTGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ICTHTHRHCKHQAQRPIQSGGGS*VQRGGD
Trigger: GTCACCCCCACGCTGAACCCAGCTGCCACCCCCAGA...CTGGATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTGTAGGTGGCATGCGTaGCATTGTGGGCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTCRWHA*HCGPTC
Trigger: ACAGGTCGGCCCACAATGCCACGCATGCCACCTACA...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCTGTAGGTGGCATGCGTaGCATTGTGGGCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICCRWHA*HCGPTC
Trigger: ACAGGTCGGCCCACAATGCCACGCATGCCACCTACA...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCTGTGGCAGGTGTAGGTaGCATGCGTGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPCGRCR*HAWHCG
Trigger: CCCACAATGCCACGCATGCCACCTACACCTGCCACA...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGAGAACCGCTCAGGGCTaGGGACGGCCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTRTAQG*GRPISS
Trigger: AGAAGATATGGGCCGTCCCCAGCCCTGAGCGGTTCT...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGCTGTCGGCCAGAAGCTaGGCTTGGGCACACCGTCAG +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLELSARS*AWAHRQ
Trigger: CTGACGGTGTGCCCAAGCCCAGCTTCTGGCCGACAG...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCCTCTAGGCCTGGGCTaGGCTCCAGGCCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPIPLGLG*APGQHP
Trigger: TGGATGCTGGCCTGGAGCCCAGCCCAGGCCTAGAGG...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCATGCATGGAGTACCATaGGCATTATCCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFMHGVP*ALSQAH
Trigger: GTGGGCCTGGGATAATGCCCATGGTACTCCATGCAT...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVAHLCT*VSSVSP
Trigger: TGGACTCACGGAGCTCACCCATGTGCACAAGTGTGC...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCAGACGCTGGAGGGCTaGGCTCCGCCTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPIQTLEG*APPQSQ
Trigger: CTGTGACTGAGGCGGAGCCCAGCCCTCCAGCGTCTG...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTACTGCAGCTCATACTaGAGCTTGCCCTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTYCSSY*SLPFSM
Trigger: CATGCTGAAGGGCAAGCTTCAGTATGAGCTGCAGTA...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGACTGGGTCTGAAAGATaGCCGGGTCACTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRTGSER*PGHSIH
Trigger: GTGAATGGAGTGACCCGGTCATCTTTCAGACCCAGT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGTTCTTGTAGCTCCGTaGGCTGCAGCCTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEVLVAP*AAASWP
Trigger: CGGCCAAGAGGCTGCAGCTCACGGAGCTACAAGAAC...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCCATGCACAGGGCAGGTaGATGCATGGAGTACCATGG +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPHAQGR*MHGVPW
Trigger: CCATGGTACTCCATGCATTCACCTGCCCTGTGCATG...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGCATGCACAGGGCAGGTaGATGCATGGAGTACCATGG +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTHAQGR*MHGVPW
Trigger: CCATGGTACTCCATGCATTCACCTGCCCTGTGCATG...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTTGCAAAAGCATGGGTaGGCTAGAGCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTLQKHG*ARAGSS
Trigger: GGAGGAGCCAGCTCTAGCTCACCCATGCTTTTGCAA...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGTCTTCATACTGGTCTTaGCAGGTAAGGGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRSSYWS*QVRVSV
Trigger: CACGCTCACCCTTACCTGGCAAGACCAGTATGAAGA...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGTCTTCATACTGGTCTTaGCAGGTAAGGGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGSSYWS*QVRVSV
Trigger: CACGCTCACCCTTACCTGGCAAGACCAGTATGAAGA...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCGTCATCCTCACAGCTaGAGGGCCAGGTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAARHPHS*RARCMA
Trigger: GGCCATGCACCTGGCCCTGCAGCTGTGAGGATGACG...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGCACAGGGCAGGTGAATaGATGGAGTACCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRHRAGE*MEYHGH
Trigger: ATGCCCATGGTACTCCATGCATTCACCTGCCCTGTG...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGTACTGTGCACACTTGTaGACATGGGTGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRYCAHL*TWVSSV
Trigger: CACGGAGCTCACCCATGTGCACAAGTGTGCACAGTA...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTACAAAGCCCCGGAGATaGTGTGGACCAACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPTKPRR*CGPTCN
Trigger: GTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGT...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGAACAAAGCCCCGGAGATaGTGTGGACCAACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRTKPRR*CGPTCN
Trigger: GTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGT...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp AGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCTGCATAGTTCCAACCTaGAGCCCCCTCCATGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPDMHRAGECMEYHGHYPCIVPT*SPLHEC
Trigger: GCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCA...GGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCATGTCTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCCACCGAGGACTCTCATaGATTCTCTCAGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVHRGLS*ILSATS
Trigger: AGAGGTAGCTGAGAGAATGCATGAGAGTCCTCGGTG...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGAGTGTTTCCACTCTTGTaGTCCCATCCAAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGVFPLL*SHPSLT
Trigger: TGTGAGACTTGGATGGGAGCACAAGAGTGGAAACAC...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTGTAATCACAGCTCACTaGAGCCTCAAATTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTVITAH*SLKFLG
Trigger: GCCCAGGAATTTGAGGCTGCAGTGAGCTGTGATTAC...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGGAGGCTGCAGGAGGTaGCCTCGTCCTTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEGGCRR*PRPSAL
Trigger: AAGAGCTGAAGGACGAGGCCACCTCCTGCAGCCTCC...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGTCGTCGGCCATGAAGTaGAATACATCCATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGSSAMK*NTSMWQ
Trigger: CTGCCACATGGATGTATTCCACTTCATGGCCGACGA...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGCCAGAAGCTGGGCTTaGGCACACCGTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEARSWA*AHRQTP
Trigger: TGGAGTCTGACGGTGTGCCCAAGCCCAGCTTCTGGC...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGGGCAGGTGAATGCATaGAGTACCATGGGCATTATC +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRGQVNA*STMGII
Trigger: GATAATGCCCATGGTACTCCATGCATTCACCTGCCC...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NALIPQSPGDAVDQLATQAHLCT*VSSVSP
Trigger: TGGACTCACGGAGCTCACCCATGTGCACAAGTGTGC...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGCCTTTCGCTTCCTGTTaGCAGGTGATAAGGAACAAT +
Preference number: 4 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTPFASC*QVIRNN
Trigger: ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGG...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCTGCAGTCTGACCTTTaGGGAGGAAGACGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAALQSDL*GGRRGR
Trigger: CCGGCCCCGTCTTCCTCCCCAAAGGTCAGACTGCAG...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGCAGAGTCCCCCAATCTaGCCTCAGGCCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEQSPPI*PQAFPN
Trigger: GTTGGGGAAGGCCTGAGGCCAGATTGGGGGACTCTG...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp ATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCAGGTTCTTGTAGCTCCGTaGGCTGCAGCCTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: ICTHTHRHCKHQAQRPIQVLVAP*AAASWP
Trigger: CGGCCAAGAGGCTGCAGCTCACGGAGCTACAAGAAC...CTGGATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGAGGACTGACCTGTGCTaGCTTCCAACCCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLERTDLC*LPTRPC
Trigger: ACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCT...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGACAAACACGTTTACTGTaGACACTTGTGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGQTRLL*TLVHMG
Trigger: ACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTG...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGTGGCCGGAGCACACTaGATAGTTCCAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEVAGAH*IVPTCS
Trigger: GCTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCAC...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp AATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGCTCCTGGAACCTGTTaGCCCCAAGAAGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: NALIPQSPGDAVDQLATQAPGTC*PQEGVK
Trigger: TTTCACACCTTCTTGGGGGCAACAGGTTCCAGGAGC...TTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp CATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATCCATTCCGTGTGCTaGGGGCAGTCTGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: HGLTPSPFASCWQVIRNNIHSVC*GQSDGL
Trigger: AAGCCCATCAGACTGCCCCCAGCACACGGAATGGAT...ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CCA 90 bp CCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAAAAGCATTCAGCTCTTCATACTaGTCTTGCCAGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSAGLTCADFQPDPVAKAFSSSY*SCQVRV
Trigger: CACCCTTACCTGGCAAGACCAGTATGAAGAGCTGAA...TGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp TGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCTTCAGCTCTTCATACTaGTCTTGCCAGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CVPYTGDIANFPQVCHAFFSSSY*SCQVRV
Trigger: CACCCTTACCTGGCAAGACCAGTATGAAGAGCTGAA...GAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTTTACTCAGTCACTGTGTCAATaGACACCAGGCCGTATGGCC +
Preference number: 4 (lower is better)
Translates to: DPRREDGCCHLLTTNTFTQSLCQ*TPGRMA
Trigger: GGCCATACGGCCTGGTGTCCATTGACACAGTGACTG...AGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCATGCATGGAGTACCATaGGCATTATCCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICMHGVP*ALSQAH
Trigger: GTGGGCCTGGGATAATGCCCATGGTACTCCATGCAT...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTGGGCAGGTGAATGCATaGAGTACCATGGGCATTATC +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPGQVNA*STMGII
Trigger: GATAATGCCCATGGTACTCCATGCATTCACCTGCCC...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGGGGCAGGTGAATGCATaGAGTACCATGGGCATTATC +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRGQVNA*STMGII
Trigger: GATAATGCCCATGGTACTCCATGCATTCACCTGCCC...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGACCTTTCGCTTCCTGTTaGCAGGTGATAAGGAACAAT +
Preference number: 4 (lower is better)
Translates to: RVTSPISPRCVMPSPLSGPFASC*QVIRNN
Trigger: ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGG...TCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTCACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCACCCACCCATTTCTTaGAGTCTCCGCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPIHPPIS*SLRCSP
Trigger: AGGGCTGCAGCGGAGACTTCAAGAAATGGGTGGGTG...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTG +
Preference number: 4 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRAVVIC*PQTRLL
Trigger: CAGTAAACGTGTTTGTGGTCAACAGATGACAACAGC...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCAAGAGCTCCTCTATCTaGGCTGCCTCTAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICKSSSI*AASSGL
Trigger: CAAACCACTAGAGGCAGCTCAGATAGAGGAGCTCTT...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR CCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGTTCCCGAGGTCACCATaGGCTCACTCCATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEFPRSP*AHSIPF
Trigger: AAAGGGGATGGAGTGAGCCCATGGTGACCTCGGGAA...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp ATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCAGATTGAGGGTCTGCTCTaGGCTGCGTACCGTACACGG +
Preference number: 4 (lower is better)
Translates to: ICTHTHRHCKHQAQRPIQIEGLL*AAYRTR
Trigger: CCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT...CTGGATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTAAAAGAAATCTTGGTTaGTGGGGAGCTGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSKRNLG*WGAVSK
Trigger: CTTGGAAACAGCTCCCCACCAACCAAGATTTCTTTT...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GCCGGAGCACACTGCATAGTTCCAACCTGCAGCCCCCTCCATGAGTGCCACGGGGGCCTGCTACGTAATTaGTGTTTAATAAATATCTCT +
Preference number: 4 (lower is better)
Translates to: AGAHCIVPTCSPLHECHGGLLRN*CLINIS
Trigger: AGAGATATTTATTAAACACCAATTACGTAGCAGGCC...CCCGTGGCACTCATGGAGGGGGCTGCAGGTTGGAACTATGCAGTGTGCTCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp AGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCAACCTGCAGATAGAGTTGCTGGCCTaGTATAACTTGTGTTTTATC +
Preference number: 4 (lower is better)
Translates to: RGPSRMCGRSTLHSSNLQIELLA*YNLCFI
Trigger: GATAAAACACAAGTTATACCAGGCCAGCAACTCTAT...CTGCAGGTTGGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR TCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGAAAATGTCGTCGGCCATaGAGTGGAATACATCCATGT +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRKCRRP*SGIHPC
Trigger: ACATGGATGTATTCCACTTCATGGCCGACGACATTT...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGATATTATACTGTCCTaGGAAGGTCACAGTCACGTT +
Preference number: 4 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVDIILS*EGHSHV
Trigger: AACGTGACTGTGACCTTCTCAGGACAGTATAATATC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTGATATTATACTGTCCTaGGAAGGTCACAGTCACGTT +
Preference number: 4 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTDIILS*EGHSHV
Trigger: AACGTGACTGTGACCTTCTCAGGACAGTATAATATC...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGCTGTTGTCATCTGTTaGCCACAAACACGTTTACTG +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVAVVIC*PQTRLL
Trigger: CAGTAAACGTGTTTGTGGTCAACAGATGACAACAGC...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CGTGGACATGCCACTGCGCACCTAAGACACACACACACACACACATGCATATGCGCTCATACTGAAGCTTaGCCTTCAGCATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGHATAHLRHTHTHTCICAHTEA*PSACRR
Trigger: CCTTCTACATGCTGAAGGGCAAGCTTCAGTATGAGC...GCATATGCATGTGTGTGTGTGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTCAAACACGTTTACTGTaGACACTTGTGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPQTRLL*TLVHMG
Trigger: ACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTG...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACAAACACGTTTACTGTaGACACTTGTGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRQTRLL*TLVHMG
Trigger: ACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTG...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCTCAGTCACAGGCAATaGCCTGATCCCACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPILSHRQ*PDPTKP
Trigger: GGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAG...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTCCTTTCGCTTCCTGTTaGCAGGTGATAAGGAACAAT +
Preference number: 4 (lower is better)
Translates to: EMLWTNLQHKTLGGRTAVPFASC*QVIRNN
Trigger: ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGG...AACAGCCGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CAA 72 bp CAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTaGACCACAAACACGTTTACTGTGCACACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QDPRREDGCCHL*TTNTFTVHTCA
Trigger: TGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCTTTCCAGGATGCAGATaGCCGTCTGGAGGTAATCGG +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPIFPGCR*PSGGNR
Trigger: CCGATTACCTCCAGACGGTCATCTGCATCCTGGAAA...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCAGTTTCCAGGATGCAGATaGCCGTCTGGAGGTAATCGG +
Preference number: 4 (lower is better)
Translates to: ICTHTHRHCKHQAQRPIQFPGCR*PSGGNR
Trigger: CCGATTACCTCCAGACGGTCATCTGCATCCTGGAAA...CTGGATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGAAATGTCGTCGGCCATaGAGTGGAATACATCCATGT +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTKCRRP*SGIHPC
Trigger: ACATGGATGTATTCCACTTCATGGCCGACGACATTT...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAATCTGAGGCCGCTGGCTaGCACCCAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKSEAAG*HPAACA
Trigger: TGCACATGCGGCTGGGTGGCAGCCAGCGGCCTCAGA...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGTCTTCATACTGGTCTTaGCAGGTAAGGGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLESSYWS*QVRVSV
Trigger: CACGCTCACCCTTACCTGGCAAGACCAGTATGAAGA...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTTTACTGCTCATACTGAAGCTTaGCCTTCAGCATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: DPRREDGCCHLLTTNTFTAHTEA*PSACRR
Trigger: CCTTCTACATGCTGAAGGGCAAGCTTCAGTATGAGC...AGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCACGTGGACATGCCACTaGGCACCTAAGACACACACA +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPITWTCH*APKTHT
Trigger: TGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGT...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTACGTGGACATGCCACTaGGCACCTAAGACACACACA +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAATWTCH*APKTHT
Trigger: TGTGTGTGTCTTAGGTGCGCAGTGGCATGTCCACGT...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCACAGGGCAGGTGAATaGATGGAGTACCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPIHRAGE*MEYHGH
Trigger: ATGCCCATGGTACTCCATGCATTCACCTGCCCTGTG...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTAGCCTCCACAATGGATaGGTCTTCAGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAASLHNG*VFRLQK
Trigger: CTTCTGGAGCCTGAAGACCCATCCATTGTGGAGGCT...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CCA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGAAAAGAAATCTTGGTTaGTGGGGAGCTGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRKRNLG*WGAVSK
Trigger: CTTGGAAACAGCTCCCCACCAACCAAGATTTCTTTT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
3UTR CAA 72 bp TCATCTGTTGACCACAAACACGTTTACTGTGCACACTaGTGCACATGGGTGAGCTCCGTGAGTCCAGACATG +
Preference number: 4 (lower is better)
Translates to: SSVDHKHVYCAH*CTWVSSVSPDM
Trigger: CATGTCTGGACTCACGGAGCTCACCCATGTGCACAAGTGTGCACAGTAAACGTGTTTGTGGTCAACAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
3UTR CAA 72 bp TCACCATGGGCTCACTCCATCCCCTTTCGCTTCCTGTaGGCAGGTGATAAGGAACAATATGGACTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SPWAHSIPFRFL*AGDKEQYGLLA
Trigger: TGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CATGGGCTCACTCCATCCCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATTCTGTGTTTATAAGCTaGGTTCCCTTCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HGLTPSPFASCWQVIRNNSVFIS*VPFKGG
Trigger: CCCACCTTTGAAGGGAACTCAGCTTATAAACACAGA...ATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGGGATGGAGTGAGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGCTCATACTGAAGCTTaGCCTTCAGCATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEAHTEA*PSACRR
Trigger: CCTTCTACATGCTGAAGGGCAAGCTTCAGTATGAGC...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR GCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAATGTAGCTCCGTGAGCTaGAGCCTCTTGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKCSSVS*SLLAGL
Trigger: GAGCCCGGCCAAGAGGCTGCAGCTCACGGAGCTACA...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR GCA 90 bp ATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCCAGCAGGAGACCAAAGGCTaGAGGTGTCTTCACATCACA +
Preference number: 4 (lower is better)
Translates to: ICTHTHRHCKHQAQRPIQQETKG*RCLHIT
Trigger: TGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTG...CTGGATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGAAATGTCGTCGGCCATaGAGTGGAATACATCCATGT +
Preference number: 4 (lower is better)
Translates to: ASCWQVIRNNMDFLQLLEKCRRP*SGIHPC
Trigger: ACATGGATGTATTCCACTTCATGGCCGACGACATTT...CTCCAGGAGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTAGGGTCTTCGTAATCTaGGCGCCAGGAGATATTATA +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAARVFVI*APGDII
Trigger: TATAATATCTCCTGGCGCTCAGATTACGAAGACCCT...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR TCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAACGTACCGTACACGGGTaGCATCGCCAATTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKRTVHG*HRQFPP
Trigger: TGGGGGAAATTGGCGATGTCACCCGTGTACGGTACG...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp CACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAGGCCCATCAGAAATCTTGGTTGGTaGGGAGCTGTTTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: HICTHTHRHCKHQAQRPIRNLGW*GAVSKR
Trigger: TCTCTTGGAAACAGCTCCCCACCAACCAAGATTTCT...GATGGGCCTTTGAGCCTGATGTTTACAGTGTCTGTGTGTGTGTGTGCATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTAGAAATCTTGGTTGGTaGGGAGCTGTTTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAARNLGW*GAVSKR
Trigger: TCTCTTGGAAACAGCTCCCCACCAACCAAGATTTCT...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR GCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAAGAAATCCATTCCGTGTaGTGGGGGCAGTCTGATGGG +
Preference number: 4 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKEIHSV*WGQSDG
Trigger: CCCATCAGACTGCCCCCAGCACACGGAATGGATTTC...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAAGCACACTTGTGCACATaGGTGAGCTCCGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKAHLCT*VSSVSP
Trigger: TGGACTCACGGAGCTCACCCATGTGCACAAGTGTGC...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CCA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGGGCCTGCTACGTAATTaGTGTTTAATAAATATCTCT +
Preference number: 4 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTGLLRN*CLINIS
Trigger: AGAGATATTTATTAAACACCAATTACGTAGCAGGCC...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CCA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAAAGTTCCCTTCAAAGGTaGGATTCTGAGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKSSLQR*DSEEPH
Trigger: ATGAGGCTCCTCAGAATCCCACCTTTGAAGGGAACT...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
3UTR CAA 72 bp CTTAATTCACATTTCAACAGGTTCTCTGACAAATCATaGACAAACAACTTGACCTCCCTTCAATTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LNSHFNRFSDKS*TNNLTSLQFSR
Trigger: CCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTCAGAGAACCTGTTGAAATGTGAATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS CCA 90 bp CCGCAGCAGGGATGCACGGGCCGCAGACAGACAGACACAGCTGCGTaGCTGTCAGCCACACTCAGGGAGAGGCAGGCAGAGGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: PQQGCTGRRQTDTAA*LSATLRERQAEGQT
Trigger: CGTCTGGCCCTCTGCCTGCCTCTCCCTGAGTGTGGCTGACAGCCACGCAGCTGTGTCTGTCTGTCTGCGGCCCGTGCATCCCTGCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS CCA 90 bp AGGGCCAGACGCCGAGCTTACGGTCACTCAGCAGAGAGACGCCAGTaGGTCTGTCTGAGGCCGCTGGCTGCCACCCAGCCGCATGTGCAG +
Preference number: 5 (lower is better)
Translates to: RARRRAYGHSAERRQ*VCLRPLAATQPHVQ
Trigger: CTGCACATGCGGCTGGGTGGCAGCCAGCGGCCTCAGACAGACCCACTGGCGTCTCTCTGCTGAGTGACCGTAAGCTCGGCGTCTGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS GCA 90 bp CCGTCAGACTCCACCAGCTCTGCTGGTTCTTGTAGCTCCGTGAGCTaGAGCCTCTTGGCCGGGCTCCGTGGTGGGTGGCAGCTGTACACC +
Preference number: 5 (lower is better)
Translates to: PSDSTSSAGSCSSVS*SLLAGLRGGWQLYT
Trigger: GGTGTACAGCTGCCACCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCACGGAGCTACAAGAACCAGCAGAGCTGGTGGAGTCTGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS GCA 90 bp GGCCAGCATCCAGGTCCAGGGCTGGGTAGCCGTCATCCTCACAGCTaGAGGGCCAGGTGCATGGCCCCTCTGCATCTAGCACAGTCACTG +
Preference number: 5 (lower is better)
Translates to: GQHPGPGLGSRHPHS*RARCMAPLHLAQSL
Trigger: CAGTGACTGTGCTAGATGCAGAGGGGCCATGCACCTGGCCCTGCAGCTGTGAGGATGACGGCTACCCAGCCCTGGACCTGGATGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS CCA 90 bp CTAGCCCAGGGCTGCCAGCTGAGACACAGCCACAGGACAGGACTGTaGTCCCTGCATCCAAGAGTGGGTCCTCTAGGCCTGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LAQGCQLRHSHRTGL*SLHPRVGPLGLGWA
Trigger: AGCCCAGCCCAGGCCTAGAGGACCCACTCTTGGATGCAGGGACCACAGTCCTGTCCTGTGGCTGTGTCTCAGCTGGCAGCCCTGGGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS GCA 90 bp CCATTCACTCCAGGTCCCCTGGTAGGAGGAGCCAGGCATGGGCCCTaGCCGCACCTGCAGCTCATAGCTCGAGTCTTTGCGGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: PFTPGPLVGGARHGP*PHLQLIARVFAELQ
Trigger: CTGGAGTTCCGCAAAGACTCGAGCTATGAGCTGCAGGTGCGGGCAGGGCCCATGCCTGGCTCCTCCTACCAGGGGACCTGGAGTGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000561953.1
ENST00000564089.5
ENST00000564583.1
CDS CCA 90 bp GGTCACTCCATTCACTCCAGGTCCCCTGGTAGGAGGAGCCAGGCATaGGCCCTGCCCGCACCTGCAGCTCATAGCTCGAGTCTTTGCGGA +
Preference number: 5 (lower is better)
Translates to: GHSIHSRSPGRRSQA*ALPAPAAHSSSLCG
Trigger: TCCGCAAAGACTCGAGCTATGAGCTGCAGGTGCGGGCAGGGCCCATGCCTGGCTCCTCCTACCAGGGGACCTGGAGTGAATGGAGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
ENST00000564583.1
CDS-3UTR CAA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGTGGCATGCGTGGCATaGTGGGCCGACCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTVACVA*WADLWR
Trigger: CCTCCACAGGTCGGCCCACAATGCCACGCATGCCAC...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: GLGSASVTGNALIPQSPGKVTVT*KGGAGL
Trigger: CAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTT...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp AAGGAACCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAGTGAGCTGCAGCCTCTaGGCCGGGCTCCGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: KEPSAGLTCADFQPDPVAVSCSL*AGLRGG
Trigger: CCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCAC...TGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTGTGAGCTGCAGCCTCTaGGCCGGGCTCCGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTVSCSL*AGLRGG
Trigger: CCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCAC...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGGTGAGCTGCAGCCTCTaGGCCGGGCTCCGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEVSCSL*AGLRGG
Trigger: CCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCAC...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGGCCAGAAGCTGGGCTaGGGCACACCGTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTGQKLG*GTPSDS
Trigger: GGAGTCTGACGGTGTGCCCAAGCCCAGCTTCTGGCC...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCCCGGGAGACAGAGGTaGCAGAGAGCCGAGATCGCA +
Preference number: 5 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLPGRQR*QRAEIA
Trigger: TGCGATCTCGGCTCTCTGCAACCTCTGTCTCCCGGG...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp GGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGGCTCCTGGAACCTGTaGCCCCCAAGAAGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: GLGSASVTGNALIPQSPGGSWNL*PPRRCE
Trigger: TTCACACCTTCTTGGGGGCAACAGGTTCCAGGAGCC...TCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp GGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTCTCCGCTGCAGCCCTaGTACAGGGGCATGAAGAAC +
Preference number: 5 (lower is better)
Translates to: GLRLSHRQCPDPTKPRRCSPLQP*YRGMKN
Trigger: GTTCTTCATGCCCCTGTACAAGGGCTGCAGCGGAGA...GCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACTGAGGCGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTCAGGTGCACGGGGTGTaGAGGGCTGCGCCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPQVHGV*RAAPAP
Trigger: CGGAGCAGGCGCAGCCCTCAACACCCCGTGCACCTG...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS GCA 90 bp GGTCCAGGGCTGGGTAGCCGTCATCCTCACAGCTGCAGGGCCAGGTaGATGGCCCCTCTGCATCTAGCACAGTCACTGTGTCAATGGACA +
Preference number: 5 (lower is better)
Translates to: GPGLGSRHPHSCRAR*MAPLHLAQSLCQWT
Trigger: TGTCCATTGACACAGTGACTGTGCTAGATGCAGAGGGGCCATGCACCTGGCCCTGCAGCTGTGAGGATGACGGCTACCCAGCCCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS GCA 90 bp TCACAGAGCCCTAGGGATGTGGAGGGGGTACCTGCTGCTTCTGCCTaGCCGGCGTCTCTTCCCAAAGAGCTCCTCTATCTGAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SQSPRDVEGVPAASA*PASLPKELLYLSCL
Trigger: GAGGCAGCTCAGATAGAGGAGCTCTTTGGGAAGAGACGCCGGGCAGGCAGAAGCAGCAGGTACCCCCTCCACATCCCTAGGGCTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS-3UTR CAA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGTGGCATGCGTGGCATaGTGGGCCGACCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVVACVA*WADLWR
Trigger: CCTCCACAGGTCGGCCCACAATGCCACGCATGCCAC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCCCGGCCCTCCAACTTaGCTCCTCTGTGTTTATAAG +
Preference number: 5 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSPGPPT*LLCVYK
Trigger: CTTATAAACACAGAGGAGCAAAGTTGGAGGGCCGGG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGTCTCCGCTGCAGCCCTaGTACAGGGGCATGAAGAAC +
Preference number: 5 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTSPLQP*YRGMKN
Trigger: GTTCTTCATGCCCCTGTACAAGGGCTGCAGCGGAGA...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAAAAGCAACAGCCCAGGTGACCTaGTCTCTGGCTCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PSAGLTCADFQPDPVAKATAQVT*SLAQGP
Trigger: TGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGT...TGCTTTTGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCACAGCCCAGGTGACCTaGTCTCTGGCTCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISTAQVT*SLAQGP
Trigger: TGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGT...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGCATAGTTCCCCCTTTCGCTTCCTGTaGGCAGGTGATAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: GQGRGPSRMCGRSTLHSSPFRFL*AGDKEQ
Trigger: TTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG...GGAACTATGCAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CAA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGATGGGGTCACCTGGCTaGACTGCCCGACCTGCTACG +
Preference number: 5 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRMGSPG*TARPAT
Trigger: CGTAGCAGGTCGGGCAGTCAAGCCAGGTGACCCCAT...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS CCA 90 bp GGGCCTTCTGTTTCGGCTTCTTTCTCAGAAATCCATTCCGTGTGCTaGGGGCAGTCTGATGGGCTTCTGGGGGTGGCAGCTGGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GPSVSASFSEIHSVC*GQSDGLLGVAAGFS
Trigger: GCTGAACCCAGCTGCCACCCCCAGAAGCCCATCAGACTGCCCCCAGCACACGGAATGGATTTCTGAGAAAGAAGCCGAAACAGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS CCA 90 bp GCCAGGTGCATGGCCCCTCTGCATCTAGCACAGTCACTGTGTCAATaGACACCAGGCCGTATGGCCGATCCCTCTCCTCACTGTAAGCTG +
Preference number: 5 (lower is better)
Translates to: ARCMAPLHLAQSLCQ*TPGRMADPSPHCKL
Trigger: CAGCTTACAGTGAGGAGAGGGATCGGCCATACGGCCTGGTGTCCATTGACACAGTGACTGTGCTAGATGCAGAGGGGCCATGCACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTTCTCCGCTGCAGCCCTaGTACAGGGGCATGAAGAAC +
Preference number: 5 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSSPLQP*YRGMKN
Trigger: GTTCTTCATGCCCCTGTACAAGGGCTGCAGCGGAGA...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCGCACCCACCCATTTCTaGAAGTCTCCGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISAPTHF*KSPLQP
Trigger: GGGCTGCAGCGGAGACTTCAAGAAATGGGTGGGTGC...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGCACCCACCCATTTCTaGAAGTCTCCGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRAPTHF*KSPLQP
Trigger: GGGCTGCAGCGGAGACTTCAAGAAATGGGTGGGTGC...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTACAGCCCAGGTGACCTaGTCTCTGGCTCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPTAQVT*SLAQGP
Trigger: TGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGT...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGGAGGGAGGACGGCTGTaGTCATCTGTTGACCACAAA +
Preference number: 5 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLEGGRL*SSVDHK
Trigger: TTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTC...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS GCA 90 bp CCCAGGGGTCTCCCCGGTTCCTGTACTGCAGCTCATACTGAAGCTTaGCCTTCAGCATGTAGAAGGCAGGGTCTTCGTAATCTGAGCGCC +
Preference number: 5 (lower is better)
Translates to: PRGLPGSCTAAHTEA*PSACRRQGLRNLSA
Trigger: GGCGCTCAGATTACGAAGACCCTGCCTTCTACATGCTGAAGGGCAAGCTTCAGTATGAGCTGCAGTACAGGAACCGGGGAGACCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000561953.1
ENST00000564089.5
CDS CCA 90 bp ACCAATCAGGCTGTCATAAGACCTGTCACTCTGATGACGGGCAGCTaGGCCTCCAGGCAGGTGTCCCACAGAGCAGCAGACAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TNQAVIRPVTLMTGS*ASRQVSHRAADRGK
Trigger: CTTTCCTCTGTCTGCTGCTCTGTGGGACACCTGCCTGGAGGCCCAGCTGCCCGTCATCAGAGTGACAGGTCTTATGACAGCCTGATTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS-3UTR CAA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQKVTVT*KGGAGL
Trigger: CAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTT...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTTTACTGGCCAGAAGCTGGGCTaGGGCACACCGTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: DPRREDGCCHLLTTNTFTGQKLG*GTPSDS
Trigger: GGAGTCTGACGGTGTGCCCAAGCCCAGCTTCTGGCC...AGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGACGCAGGAAATCGCTaGAACCCGGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVDAGNR*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCGATTTCCTGCGTC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp GACATCGCCAATTTCCCCCAGGTGTGTCATGCCTTCCCCACTGTCTGGATAAGGAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: DIANFPQVCHAFPTVWIRKVTVT*KGGAGL
Trigger: CAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTT...CCTTATCCAGACAGTGGGGAAGGCATGACACACCTGGGGGAAATTGGCGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGATGCTGTGGACCAACTaGCAACACAAGACCCTAGGA +
Preference number: 5 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTMLWTN*QHKTLG
Trigger: TCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCAT...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGATTTATTGGCAGGATaGAATTGGGGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: APEMLWTNLQHKTLGGRTDLLAG*NWGRVG
Trigger: CCCTACCCTGCCCCAATTCAATCCTGCCAATAAATC...CGTCCTCCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CAA 90 bp CAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCAGTGCTGTGTTTCCACTCTaGTGCTCCCATCCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: QVSSHHSPGDLVSGSGPSAVFPL*CSHPSL
Trigger: GAGACTTGGATGGGAGCACAAGAGTGGAAACACAGC...ACTGGGCCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGCCTCTCGCAGCCTCATaGCCTCATCTTCTGTTTCGG +
Preference number: 5 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEPLAAS*PHLLFR
Trigger: CCGAAACAGAAGATGAGGCAATGAGGCTGCGAGAGG...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS CCA 90 bp TCATCTTCTGTTTCGGCTTCTTTCTCAGAAATCCATTCCGTGTGCTaGGGGCAGTCTGATGGGCTTCTGGGGGTGGCAGCTGGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSSVSASFSEIHSVC*GQSDGLLGVAAGFS
Trigger: GCTGAACCCAGCTGCCACCCCCAGAAGCCCATCAGACTGCCCCCAGCACACGGAATGGATTTCTGAGAAAGAAGCCGAAACAGAAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS-3UTR CAA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGGAGGGAGACACTTCTaGAGTCCACTGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVGGRHF*SPLRSA
Trigger: AGCTGATCTCAGTGGACTCAAGAAGTGTCTCCCTCC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp AGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTGGAGGGAGACACTTCTaGAGTCCACTGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: SHRQCPDPTKPRRCCGPTGGRHF*SPLRSA
Trigger: AGCTGATCTCAGTGGACTCAAGAAGTGTCTCCCTCC...AGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCATTGCCTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp GACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTTTACTGCACCCACCCATTTCTaGAAGTCTCCGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: DPRREDGCCHLLTTNTFTAPTHF*KSPLQP
Trigger: GGGCTGCAGCGGAGACTTCAAGAAATGGGTGGGTGC...AGTAAACGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp AAGGAACCTTCCGCAGGACTGACCTGTGCTGACTTCCAACCCGACCCTGTTGCAGTTTACTGTGCACACTaGTGCACATGGGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: KEPSAGLTCADFQPDPVAVYCAH*CTWVSS
Trigger: GGAGCTCACCCATGTGCACAAGTGTGCACAGTAAAC...TGCAACAGGGTCGGGTTGGAAGTCAGCACAGGTCAGTCCTGCGGAAGGTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCGTTTACTGTGCACACTaGTGCACATGGGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISVYCAH*CTWVSS
Trigger: GGAGCTCACCCATGTGCACAAGTGTGCACAGTAAAC...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGGAGGGAGGACGGCTGTaGTCATCTGTTGACCACAAA +
Preference number: 5 (lower is better)
Translates to: TWVSSVSPDMHRAGECMEEGGRL*SSVDHK
Trigger: TTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTC...CTCCATGCATTCACCTGCCCTGTGCATGTCTGGACTCACGGAGCTCACCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp AGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCCCTTTCGCTTCCTGTaGGCAGGTGATAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: RLQVSSHHSPGDLVSGSGPFRFL*AGDKEQ
Trigger: TTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG...CCCTGAGCCAGAGACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGATGCTGTGGACCAACTaGCAACACAAGACCCTAGGA +
Preference number: 5 (lower is better)
Translates to: PQSPGDAVDQLATQDPRRMLWTN*QHKTLG
Trigger: TCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCAT...CCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGAACAATATGGACTTCTaGCAGCTCCTGGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGNNMDF*QLLEAD
Trigger: GTCTGCCTCCAGGAGCTGCAAGAAGTCCATATTGTT...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp TGCACAGGGCAGGTGAATGCATGGAGTACCATGGGCATTATCCCAGGCCCACAGAACAATATGGACTTCTaGCAGCTCCTGGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: CTGQVNAWSTMGIIPGPQNNMDF*QLLEAD
Trigger: GTCTGCCTCCAGGAGCTGCAAGAAGTCCATATTGTT...CTGTGGGCCTGGGATAATGCCCATGGTACTCCATGCATTCACCTGCCCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ATTGAATTGGGGCAGGGTAGGGGGCCCAGCAGGATGTGTGGCCGGAGCACACTGATAAGACAGGATTTATaGGCAGGATTGAATTGGGGC +
Preference number: 5 (lower is better)
Translates to: IELGQGRGPSRMCGRSTLIRQDL*AGLNWG
Trigger: GCCCCAATTCAATCCTGCCAATAAATCCTGTCTTAT...CAGTGTGCTCCGGCCACACATCCTGCTGGGCCCCCTACCCTGCCCCAATTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CAA 90 bp ATTGAGGGTCTGCTCTGGGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCGACTGGTCTGTGATGTaGACACTGAAAATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: IEGLLWAAYRTRVTSPISDWSVM*TLKMSS
Trigger: CGACGACATTTTCAGTGTCAACATCACAGACCAGTC...GGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCCCAGAGCAGACCCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCGACTGGTCTGTGATGTaGACACTGAAAATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: PGDQRLQVSSHHSPGDLVDWSVM*TLKMSS
Trigger: CGACGACATTTTCAGTGTCAACATCACAGACCAGTC...GACAAGGTCACCTGGGCTGTGATGTGAAGACACCTGCAGCCTTTGGTCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGGAGGGAGGACGGCTGTaGTCATCTGTTGACCACAAA +
Preference number: 5 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTEGGRL*SSVDHK
Trigger: TTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTC...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp TGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTTTCGCTTCCTGTaGGCAGGTGATAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: CPDPTKPRRCCGPTCNTRPFRFL*AGDKEQ
Trigger: TTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG...TCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CTGATCCCACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTGATTTATTGGCAGGATaGAATTGGGGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LIPQSPGDAVDQLATQDPDLLAG*NWGRVG
Trigger: CCCTACCCTGCCCCAATTCAATCCTGCCAATAAATC...AGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTGGGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CAA 90 bp GGCTGCGTACCGTACACGGGTGACATCGCCAATTTCCCCCAGGTGTGTCATGCCCAGGTGAGCCAGCTCTaGTCTCCAACTTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: GCVPYTGDIANFPQVCHAQVSQL*SPTFIF
Trigger: AAAAATAAAAGTTGGAGACAAGAGCTGGCTCACCTG...GGCATGACACACCTGGGGGAAATTGGCGATGTCACCCGTGTACGGTACGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS GCA 90 bp CAGTTTATTCATCTGGGACCTGGGAGATTTAGACCTGATCAGGATTaGAAACTCAGGGGCGGGCAGGTCACAGAGAGGAGTGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: QFIHLGPGRFRPDQD*KLRGGQVTERSEAG
Trigger: ACCTGCTTCACTCCTCTCTGTGACCTGCCCGCCCCTGAGTTTGCAATCCTGATCAGGTCTAAATCTCCCAGGTCCCAGATGAATAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561953.1
CDS-3UTR CAA 90 bp CCCCACTGTCTGGATAAGGAAACTCTAGCCCAGAGAGGGGAGGCGACTTGGCTCTCATTGACAAACAACTaGACCTCCCTTCAATTCTCC +
Preference number: 5 (lower is better)
Translates to: PHCLDKETLAQRGEATWLSLTNN*TSLQFS
Trigger: GGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGA...GAGCCAAGTCGCCTCCCCTCTCTGGGCTAGAGTTTCCTTATCCAGACAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp ACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGGACTGGTCTGTGATGTaGACACTGAAAATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: TQDPRREDGCCHLLTTNTDWSVM*TLKMSS
Trigger: CGACGACATTTTCAGTGTCAACATCACAGACCAGTC...CGTGTTTGTGGTCAACAGATGACAACAGCCGTCCTCCCTCCTAGGGTCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CACAAAGCCCCGGAGATGCTGTGGACCAACTTGCAACACAAGACCCTAGGAGGGTTCTCTGACAAATCATaGACAAACAACTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: HKAPEMLWTNLQHKTLGGFSDKS*TNNLTS
Trigger: GGAGGTCAAGTTGTTTGTCAATGATTTGTCAGAGAA...CCCTCCTAGGGTCTTGTGTTGCAAGTTGGTCCACAGCATCTCCGGGGCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS-3UTR CAA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTAACAATATGGACTTCTaGCAGCTCCTGGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAANNMDF*QLLEAD
Trigger: GTCTGCCTCCAGGAGCTGCAAGAAGTCCATATTGTT...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS-3UTR CAA 90 bp CCCTTTCGCTTCCTGTTGGCAGGTGATAAGGAACAATATGGACTTCTTGCAGCTATAAGACAGGATTTATaGGCAGGATTGAATTGGGGC +
Preference number: 5 (lower is better)
Translates to: PFRFLLAGDKEQYGLLAAIRQDL*AGLNWG
Trigger: GCCCCAATTCAATCCTGCCAATAAATCCTGTCTTAT...AGCTGCAAGAAGTCCATATTGTTCCTTATCACCTGCCAACAGGAAGCGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000395754.4
CDS-3UTR CAA 90 bp GACAAATCATTGACAAACAACTTGACCTCCCTTCAATTCTCCAGGATGAACAAAGGAGGGAGACACTTCTaGAGTCCACTGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: DKSLTNNLTSLQFSRMNKGGRHF*SPLRSA
Trigger: AGCTGATCTCAGTGGACTCAAGAAGTGTCTCCCTCC...TTTGTTCATCCTGGAGAATTGAAGGGAGGTCAAGTTGTTTGTCAATGATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS TCA 72 bp GCAGGAGCAAGGGGGCGGCCCAGCCACGCGGCATGCTaGCTCCCACGGGCCATCCGACCCGTTCCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: AGARGRPSHAAC*LPRAIRPVPRA
Trigger: AGCACGGGGAACGGGTCGGATGGCCCGTGGGAGTCAGCATGCCGCGTGGCTGGGCCGCCCCCTTGCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS GCA 72 bp GACGGCAAGGAAGGTACCAGGCGGCCGCAGCAGGGATaGACGGGCCGCAGACAGACAGACACAGCTGCGTGG +
Preference number: 6 (lower is better)
Translates to: DGKEGTRRPQQG*TGRRQTDTAAW
Trigger: CCACGCAGCTGTGTCTGTCTGTCTGCGGCCCGTGCATCCCTGCTGCGGCCGCCTGGTACCTTCCTTGCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS CCA 72 bp CGCCGAGCTTACGGTCACTCAGCAGAGAGACGCCAGTaGGTCTGTCTGAGGCCGCTGGCTGCCACCCAGCCG +
Preference number: 6 (lower is better)
Translates to: RRAYGHSAERRQ*VCLRPLAATQP
Trigger: CGGCTGGGTGGCAGCCAGCGGCCTCAGACAGACCCACTGGCGTCTCTCTGCTGAGTGACCGTAAGCTCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS CCA 72 bp GTGAGCTGCAGCCTCTTGGCCGGGCTCCGTGGTGGGTaGCAGCTGTACACCTCCAGGGTGGAGGGCACCTCT +
Preference number: 6 (lower is better)
Translates to: VSCSLLAGLRGG*QLYTSRVEGTS
Trigger: AGAGGTGCCCTCCACCCTGGAGGTGTACAGCTGCCACCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
ENST00000564583.1
CDS TCA 72 bp GCAGGAGCAAGGGGGCGGCCCAGCCACGCGGCATGCTaGCTCCCACGGGCCTTCTGTTTCGGCTTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: AGARGRPSHAAC*LPRAFCFGFFL
Trigger: GAGAAAGAAGCCGAAACAGAAGGCCCGTGGGAGTCAGCATGCCGCGTGGCTGGGCCGCCCCCTTGCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337929.8
CDS GCA 72 bp TCCACCAGCTCTGCTGGTTCTTGTAGCTCCGTGAGCTaGAGCCTCTTGGCCGGGCTCCGTGGTGGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: STSSAGSCSSVS*SLLAGLRGGWQ
Trigger: CTGCCACCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCACGGAGCTACAAGAACCAGCAGAGCTGGTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS CCA 72 bp GGATGCACGGGCCGCAGACAGACAGACACAGCTGCGTaGCTGTCAGCCACACTCAGGGAGAGGCAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: GCTGRRQTDTAA*LSATLRERQAE
Trigger: CTCTGCCTGCCTCTCCCTGAGTGTGGCTGACAGCCACGCAGCTGTGTCTGTCTGTCTGCGGCCCGTGCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS CCA 72 bp CCCCCGAGTTCTGGGCTGTCGGCCAGAAGCTGGGCTTaGGCACACCGTCAGACTCCACCAGCTCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: PPSSGLSARSWA*AHRQTPPALLV
Trigger: AACCAGCAGAGCTGGTGGAGTCTGACGGTGTGCCCAAGCCCAGCTTCTGGCCGACAGCCCAGAACTCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS CAA 90 bp TCCACCAGCTCTGCTGGTTCTTGTAGCTCCGTGAGCTGCAGCCTCTaGGCCGGGCTCCGTGGTGGGTGGCAGCTGTACACCTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: STSSAGSCSSVSCSL*AGLRGGWQLYTSRV
Trigger: CACCCTGGAGGTGTACAGCTGCCACCCACCACGGAGCCCGGCCAAGAGGCTGCAGCTCACGGAGCTACAAGAACCAGCAGAGCTGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS CCA 72 bp GCCTCATTAGCTGGCCTGGGGTCCAGGGCTCGAAAGTaGCGGAGGAATGACCACCCACTGGCGGAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: ASLAGLGSRARK*RRNDHPLAEVA
Trigger: AGCTACCTCCGCCAGTGGGTGGTCATTCCTCCGCCACTTTCGAGCCCTGGACCCCAGGCCAGCTAATGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS GCA 72 bp CTGGGTAGCCGTCATCCTCACAGCTGCAGGGCCAGGTaGATGGCCCCTCTGCATCTAGCACAGTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: LGSRHPHSCRAR*MAPLHLAQSLC
Trigger: ACACAGTGACTGTGCTAGATGCAGAGGGGCCATGCACCTGGCCCTGCAGCTGTGAGGATGACGGCTACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS GCA 72 bp CCTAGGGATGTGGAGGGGGTACCTGCTGCTTCTGCCTaGCCGGCGTCTCTTCCCAAAGAGCTCCTCTATCTG +
Preference number: 6 (lower is better)
Translates to: PRDVEGVPAASA*PASLPKELLYL
Trigger: CAGATAGAGGAGCTCTTTGGGAAGAGACGCCGGGCAGGCAGAAGCAGCAGGTACCCCCTCCACATCCCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395754.4
CDS GCA 72 bp ATGCTGACTCCCACGGGCCATCCGACCCGTTCCCCGTaGTTCATGAGAAAGATGCAGCGACAGCTCATGGGG +
Preference number: 6 (lower is better)
Translates to: MLTPTGHPTRSP*FMRKMQRQLMG
Trigger: CCCCATGAGCTGTCGCTGCATCTTTCTCATGAAGCACGGGGAACGGGTCGGATGGCCCGTGGGAGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS CCA 72 bp ATGGCCCCTCTGCATCTAGCACAGTCACTGTGTCAATaGACACCAGGCCGTATGGCCGATCCCTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: MAPLHLAQSLCQ*TPGRMADPSPH
Trigger: GTGAGGAGAGGGATCGGCCATACGGCCTGGTGTCCATTGACACAGTGACTGTGCTAGATGCAGAGGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS CCA 72 bp GTTTCGGCTTCTTTCTCAGAAATCCATTCCGTGTGCTaGGGGCAGTCTGATGGGCTTCTGGGGGTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: VSASFSEIHSVC*GQSDGLLGVAA
Trigger: AGCTGCCACCCCCAGAAGCCCATCAGACTGCCCCCAGCACACGGAATGGATTTCTGAGAAAGAAGCCGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337929.8
ENST00000564089.5
CDS CAA 90 bp GAGCGCCAGGAGATATTATACTGTCCTGAGAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTGATGCTCTCAGCCAGGAGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: ERQEILYCPEKVTVT*KGGAGLMLSARRKL
Trigger: CAGCTTTCTCCTGGCTGAGAGCATCAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTTCTCAGGACAGTATAATATCTCCTGGCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS TCA 72 bp AGCCTTCCTTTAACTCCTCTGACTGGGTCTGAAAGATaGCCGGGTCACTCCATTCACTCCAGGTCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: SLPLTPLTGSER*PGHSIHSRSPG
Trigger: ACCAGGGGACCTGGAGTGAATGGAGTGACCCGGTCATCTTTCAGACCCAGTCAGAGGAGTTAAAGGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS TCA 72 bp ACCCCTGCCTCCATGCCTGACCCATCATGGATGAGATaGAGACCAACAACCCTGAGTGACTTTGGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: TPASMPDPSWMR*RPTTLSDFGQS
Trigger: ACTTTGCCCAAAGTCACTCAGGGTTGTTGGTCTTCATCTCATCCATGATGGGTCAGGCATGGAGGCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561953.1
CDS GCA 72 bp CTCCCCGGTTCCTGTACTGCAGCTCATACTGAAGCTTaGCCTTCAGCATGTAGAAGGCAGGGTCTTCGTAAT +
Preference number: 6 (lower is better)
Translates to: LPGSCTAAHTEA*PSACRRQGLRN
Trigger: ATTACGAAGACCCTGCCTTCTACATGCTGAAGGGCAAGCTTCAGTATGAGCTGCAGTACAGGAACCGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000561953.1
ENST00000564089.5
CDS CAA 72 bp GAGATATTATACTGTCCTGAGAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTGATGCTCTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: EILYCPEKVTVT*KGGAGLMLSAR
Trigger: CCTGGCTGAGAGCATCAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTTCTCAGGACAGTATAATATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337929.8
ENST00000395754.4
ENST00000564089.5
CDS CAA 90 bp GAGCGCCAGGAGATATTATACTGTCCTGAGAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTGACTTGGTGGAAAAACCCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: ERQEILYCPEKVTVT*KGGAGLTWWKNPGK
Trigger: TTTTCCTGGGTTTTTCCACCAAGTCAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTTCTCAGGACAGTATAATATCTCCTGGCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561953.1
CDS CCA 72 bp TCAGCTTTCTCCTCGGACTCTCTGGAAGTCTTCCACTaGGGACTTTCTAAAGTATGGCACTCATGGACATCT +
Preference number: 6 (lower is better)
Translates to: SAFSSDSLEVFH*GLSKVWHSWTS
Trigger: AGATGTCCATGAGTGCCATACTTTAGAAAGTCCCCAGTGGAAGACTTCCAGAGAGTCCGAGGAGAAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564583.1
CDS CAA 72 bp GAGATATTATACTGTCCTGAGAAGGTCACAGTCACGTaGAAAGGGGGAGCCGGCTTGACTTGGTGGAAAAAC +
Preference number: 6 (lower is better)
Translates to: EILYCPEKVTVT*KGGAGLTWWKN
Trigger: GTTTTTCCACCAAGTCAAGCCGGCTCCCCCTTTCAACGTGACTGTGACCTTCTCAGGACAGTATAATATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561953.1
CDS GCA 72 bp ACCGAGGGAAAATCACTCTACCTCTCGCAGCCTCATTaGCTCATCTTCTGTTTCGGCTTCTTTCTCAGAAAT +
Preference number: 6 (lower is better)
Translates to: TEGKSLYLSQPH*LIFCFGFFLRN
Trigger: ATTTCTGAGAAAGAAGCCGAAACAGAAGATGAGGCAATGAGGCTGCGAGAGGTAGAGTGATTTTCCCTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564089.5
CDS CCA 72 bp AAAGTACTCCCAACTCTGGGCTTCAGTTTATTCATCTaGGACCTGGGAGATTTAGACCTGATCAGGATTGCA +
Preference number: 6 (lower is better)
Translates to: KVLPTLGFSLFI*DLGDLDLIRIA
Trigger: TGCAATCCTGATCAGGTCTAAATCTCCCAGGTCCCAGATGAATAAACTGAAGCCCAGAGTTGGGAGTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561953.1