RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL20RA (Homo sapiens)

Ensembl gene IDs: ENSG00000016402

Ensembl transcript IDs: ENST00000316649.10, ENST00000316649.9, ENST00000367746.3, ENST00000367748.4, ENST00000460306.1, ENST00000461799.1, ENST00000468393.5, ENST00000541547.5, ENST00000635289.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGAAGTaGTGCTGCAGAGGACAATCAAGAGAGTGGCAGCTGGGTGGGGTG +
Preference number: 1 (lower is better)
Translates to: CDERCSHSRQVITWK*CCRGQSREWQLGGV
Trigger: CACCCCACCCAGCTGCCACTCTCTTGATTGTCCTCTGCAGCATCACTTCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460306.1
3UTR TCA 90 bp TTAGATCTGAAACTGTTTGCATTTGCGGATAATCACGAAAGGTCATaGCCCCAGAATCCATCTCTCCTACCAGGGTTGTCTGCCTGTACC +
Preference number: 1 (lower is better)
Translates to: LDLKLFAFADNHERS*PQNPSLLPGLSACT
Trigger: GGTACAGGCAGACAACCCTGGTAGGAGAGATGGATTCTGGGGTCATGACCTTTCGTGATTATCCGCAAATGCAAACAGTTTCAGATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR GCA 90 bp GCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATaGATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGAAA +
Preference number: 1 (lower is better)
Translates to: APGLQRPTIIVKRPT*MNQSHTCYENREKK
Trigger: TTTCTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR TCA 90 bp CTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATaGACCAATCACACACGTGCTATGAGAATAGAGAAAAGAAATAAG +
Preference number: 1 (lower is better)
Translates to: LDSRGPPSLLRDLHA*TNHTRAMRIEKRNK
Trigger: CTTATTTCTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR CCA 90 bp TGGTCAGGAACTGGACCAATGCTGAGAACAATTCTAAACAACACATaGATAGAGTTCTTATTCATTGTCCTGGGTCCTTGCTCACATTTT +
Preference number: 1 (lower is better)
Translates to: WSGTGPMLRTILNNT*IEFLFIVLGPCSHF
Trigger: AAAATGTGAGCAAGGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTCAGCATTGGTCCAGTTCCTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
3UTR CCA 90 bp CTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATaGGTGATATCTCTTCTCATGAAAGAGCATCAATGGATTATGAGT +
Preference number: 1 (lower is better)
Translates to: LPGLSACTNNINKEI*VISLLMKEHQWIMS
Trigger: ACTCATAATCCATTGATGCTCTTTCATGAGAAGAGATATCACCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAAGAGACCTACATGCATaGACCAATCACACACGTGCT +
Preference number: 2 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSRDLHA*TNHTRA
Trigger: AGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCT...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCAACCGGCCAGCCCCTaGACTCCAGAGGCCCACCAT +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGQPASP*TPEAHH
Trigger: ATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCAACCGGCCAGCCCCTaGACTCCAGAGGCCCACCAT +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYQPASP*TPEAHH
Trigger: ATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp GTGCAGGGTAGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCAAGGTCCTGTCAACTCTaGGTTTCTACATCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: VQGSEYPVMRGAHTADRSRSCQL*VSTSKG
Trigger: TCCTTTTGATGTAGAAACTCAGAGTTGACAGGACCT...TGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACTACCCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460306.1
3UTR-3UTR TCA 90 bp AGAGAGTGGCAGCTGGGTGGGGTGACTTTTAAGGTCCTGTCAACTCTGAGTTTCCATCAAAAGGAATTCTaGGAGTGGCAAAGTCATAGA +
Preference number: 2 (lower is better)
Translates to: REWQLGGVTFKVLSTLSFHQKEF*EWQSHR
Trigger: TCTATGACTTTGCCACTCTCAGAATTCCTTTTGATG...GAAACTCAGAGTTGACAGGACCTTAAAAGTCACCCCACCCAGCTGCCACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460306.1
3UTR-3UTR TCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCTGGGATCAAAGGGGTaGCTCACTTGTTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYLGSKG*LTCLHR
Trigger: CCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATCTGGGATCAAAGGGGTaGCTCACTTGTTTGCACAGG +
Preference number: 2 (lower is better)
Translates to: FHMRPTYHQPGICACFKYLGSKG*LTCLHR
Trigger: CCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAG...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGTAGCCAAGAGTGTGTaGTATCATGAAGGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGVAKSV*YHEGLC
Trigger: GCACAGACCTTCATGATATCACACACTCTTGGCTAC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCAGGTACTTTATGGCTaGGATCAAAGGGGTGACTCA +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGQVLYG*DQRGDS
Trigger: TGAGTCACCCCTTTGATCCCAGCCATAAAGTACCTG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATAGAGACCTACATGCATaGACCAATCACACACGTGCT +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYRDLHA*TNHTRA
Trigger: AGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATCAGAGTACACCCACCTaGATAAATTCTGCACCCAGT +
Preference number: 2 (lower is better)
Translates to: FHMRPTYHQPGICACFKYQSTPT*INSAPS
Trigger: ACTGGGTGCAGAATTTATTCAGGTGGGTGTACTCTG...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGGTGACTCACTTGTTTaGACAGGAAACAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGGDSLV*TGNKRQ
Trigger: TTGCCTTTTGTTTCCTGTGCAAACAAGTGAGTCACC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTAAGAGACCTACATaGATGAACCAATCACACACG +
Preference number: 2 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHVKRPT*MNQSHT
Trigger: CGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAAC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCACCTGAATAAATTCTaGACCCAGTCTGGCAAACAT +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGHLNKF*TQSGKH
Trigger: ATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGATTCTGCACCCAGTCTaGCAAACATTTATTGACTGC +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGILHPV*QTFIDC
Trigger: GCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAAT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCCCCTACTAAATTATTaGGAGGACACTTTTCTGACT +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGPLLNY*EDTFLT
Trigger: AGTCAGAAAAGTGTCCTCTCAATAATTTAGTAGGGG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGATTCCAAAGAGTCTTTaGACGACTGCCTATTCGAAT +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGIPKSL*TTAYSN
Trigger: ATTCGAATAGGCAGTCGTTCAAAGACTCTTTGGAAT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTTTTACAGTGCTATGTaGATATGGGAAGTACCCAGA +
Preference number: 2 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHFYSAM*IWEVPR
Trigger: TCTGGGTACTTCCCATATGCACATAGCACTGTAAAA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGTTGAGGTTTTCACATaGGACCAACTTACCACCAAC +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYVEVFT*DQLTTN
Trigger: GTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAAC...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGTTAAGGCAAACCATATaGAGTTACTGCTTGTCAGAT +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGLRQTI*SYCLSD
Trigger: ATCTGACAAGCAGTAACTTCATATGGTTTGCCTTAA...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGGTGACTCACTTGTTTaGACAGGAAACAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: FHMRPTYHQPGICACFKYGDSLV*TGNKRQ
Trigger: TTGCCTTTTGTTTCCTGTGCAAACAAGTGAGTCACC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGAACCAATCACACACGTaGTATGAGAATAGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGNQSHT*YENREK
Trigger: CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTAACCAATCACACACGTaGTATGAGAATAGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTANQSHT*YENREK
Trigger: CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTT...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp CACTCCAATAACAACACCATATCCTGTCAACAGAGTTTCTGTAAAGAAGATCTGCATGCAGAGAATCAATaGATCAGGGTTGTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: HSNNNTISCQQSFCKEDLHAENQ*IRVVCS
Trigger: GGAACAAACAACCCTGATGCATTGATTCTCTGCATG...CAGATCTTCTTTACAGAAACTCTGTTGACAGGATATGGTGTTGTTATTGGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
3UTR-3UTR TCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGAGAGGACACTTTTCTaGCTACAAAAGAATACTCGT +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYERTLF*LQKNTR
Trigger: ACGAGTATTCTTTTGTAGTCAGAAAAGTGTCCTCTC...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR TCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATATTCCAAAGAGTCTTTaGACGACTGCCTATTCGAAT +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYIPKSL*TTAYSN
Trigger: ATTCGAATAGGCAGTCGTTCAAAGACTCTTTGGAAT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATTTTTACAGTGCTATGTaGATATGGGAAGTACCCAGA +
Preference number: 2 (lower is better)
Translates to: FHMRPTYHQPGICACFKYFYSAM*IWEVPR
Trigger: TCTGGGTACTTCCCATATGCACATAGCACTGTAAAA...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR GCA 90 bp ATCTCTCTACACTCCAATAACAACACCATATCCTGTCAACAGAGTTTCTGTAAACTTCCCAGATTCACATaGAGAGAATCAATGCATCAG +
Preference number: 2 (lower is better)
Translates to: ISLHSNNNTISCQQSFCKLPRFT*RESMHQ
Trigger: CTGATGCATTGATTCTCTGCATGTGAATCTGGGAAG...TTTACAGAAACTCTGTTGACAGGATATGGTGTTGTTATTGGAGTGTAGAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
3UTR-3UTR TCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATATGAAGGTCTGTGCCTaGTGTATTCACTCAAAATAT +
Preference number: 2 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYMKVCA*CIHSKY
Trigger: ATATTTTGAGTGAATACATCAGGCACAGACCTTCAT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CAA 90 bp AGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGACTTAGTAAGCCCACGTaGTACAGAAGACATTGTAGA +
Preference number: 3 (lower is better)
Translates to: SEYPVMRGAHTADRSLLGLSKPT*YRRHCR
Trigger: TCTACAATGTCTTCTGTACAACGTGGGCTTACTAAG...TCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
3UTR TCA 72 bp AAACTGTTTGCATTTGCGGATAATCACGAAAGGTCATaGCCCCAGAATCCATCTCTCCTACCAGGGTTGTCT +
Preference number: 3 (lower is better)
Translates to: KLFAFADNHERS*PQNPSLLPGLS
Trigger: AGACAACCCTGGTAGGAGAGATGGATTCTGGGGTCATGACCTTTCGTGATTATCCGCAAATGCAAACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR GCA 72 bp CTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATaGATGAACCAATCACACACGTGCTATGAGAATAGA +
Preference number: 3 (lower is better)
Translates to: LQRPTIIVKRPT*MNQSHTCYENR
Trigger: TCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR GCA 72 bp ACCAAGAGGCCAGAGTACACCCACCTGAATAAATTCTaGACCCAGTCTGGCAAACATTTATTGACTGCTTTC +
Preference number: 3 (lower is better)
Translates to: TKRPEYTHLNKF*TQSGKHLLTAF
Trigger: GAAAGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTACTCTGGCCTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CAA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATAGAGGCCCACCATCATaGTTAAGAGACCTACATGCA +
Preference number: 3 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHRGPPS*LRDLHA
Trigger: TGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR TCA 72 bp TTCATCCCAGGTACTTTATGGCTGGGATCAAAGGGGTaGCTCACTTGTTTGCACAGGAAACAAAAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: FIPGTLWLGSKG*LTCLHRKQKAK
Trigger: TTTTGCCTTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTACCTGGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR TCA 72 bp AGAGGCCCACCATCATTGTTAAGAGACCTACATGCATaGACCAATCACACACGTGCTATGAGAATAGAGAAA +
Preference number: 3 (lower is better)
Translates to: RGPPSLLRDLHA*TNHTRAMRIEK
Trigger: TTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CAA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATAAAGGGGTGACTCACTaGTTTGCACAGGAAACAAAA +
Preference number: 3 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHKGVTH*FAQETK
Trigger: TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CAA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGCCCCTACTAAATTATaGAGAGGACACTTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGAPTKL*RGHFSD
Trigger: GTCAGAAAAGTGTCCTCTCAATAATTTAGTAGGGGC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR TCA 72 bp GAAAATAATGAACCAAGAGGCCAGAGTACACCCACCTaGATAAATTCTGCACCCAGTCTGGCAAACATTTAT +
Preference number: 3 (lower is better)
Translates to: ENNEPRGQSTPT*INSAPSLANIY
Trigger: ATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTACTCTGGCCTCTTGGTTCATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CAA 90 bp CTGAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTTGTGCGGCGTATCTTTaGAACATCATGACTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LRTILNNTWIEFLFIVLGCAAYL*NIMTSQ
Trigger: CTGGGAAGTCATGATGTTCAAAAGATACGCCGCACA...ACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
3UTR-3UTR CAA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATAAAGGGGTGACTCACTaGTTTGCACAGGAAACAAAA +
Preference number: 3 (lower is better)
Translates to: FHMRPTYHQPGICACFKYKGVTH*FAQETK
Trigger: TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTT...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR-3UTR CAA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATAAAGGGGTGACTCACTaGTTTGCACAGGAAACAAAA +
Preference number: 3 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYKGVTH*FAQETK
Trigger: TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
3UTR TCA 72 bp GAGAAAGACTGTGCAAGTGAAAGCTCTTCATCAAAGTaGAGTGTACAATCTCTCTACACTCCAATAACAACA +
Preference number: 3 (lower is better)
Translates to: EKDCASESSSSK*SVQSLYTPITT
Trigger: TGTTGTTATTGGAGTGTAGAGAGATTGTACACTTCACTTTGATGAAGAGCTTTCACTTGCACAGTCTTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
3UTR CCA 72 bp TTGTCTGCCTGTACCAATAATATCAATAAGGAAATATaGGTGATATCTCTTCTCATGAAAGAGCATCAATGG +
Preference number: 3 (lower is better)
Translates to: LSACTNNINKEI*VISLLMKEHQW
Trigger: CCATTGATGCTCTTTCATGAGAAGAGATATCACCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.9
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCACAACCGGCCAGCCCCTaGACTCCAGAGGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSQPASP*TPEAHH
Trigger: ATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTG...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp GTGCAGGGTAGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCAGCCTGGGGCTCTGCGTaGCACGCTCCAGGCGACCTG +
Preference number: 4 (lower is better)
Translates to: VQGSEYPVMRGAHTADRSAWGSA*HAPGDL
Trigger: CAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGC...TGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACTACCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCATTGCGGGCCCAAGACTaGCAACGCTGCCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSLRAQD*QRCLRL
Trigger: GAGTCGCAGGCAGCGTTGGCAGTCTTGGGCCCGCAA...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCACCTCCTCCTGCAAACTaGGCTCCTGCTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSPPPAN*APALQA
Trigger: GGCCTGAAGAGCAGGAGCTCAGTTTGCAGGAGGAGG...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCACACAGCCTGCCAGTTTaGGGATCCCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSHSLPV*GSQSTR
Trigger: CCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTG...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTCACACAGCAGACAGGTCATTACTTGGAAGTGATGCTGCAGAGGACAATCAAGACGCTCCAGGCGACCTaGGTCCCAGGGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LTQQTGHYLEVMLQRTIKTLQAT*VPGRLR
Trigger: GCGGAGGCGCCCTGGGACTCAGGTCGCCTGGAGCGT...CTTGATTGTCCTCTGCAGCATCACTTCCAAGTAATGACCTGTCTGCTGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR GCA 90 bp AGAGAGTGGCAGCTGGGTGGGGTGACTTTTAAGGTCCTGTCAACTCTGAGTTTCAGGACGGGAATACCCTaGCCGTCCCCAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: REWQLGGVTFKVLSTLSFRTGIP*PSPRRR
Trigger: GCGGCGCCTTGGGGACGGGCAGGGTATTCCCGTCCT...GAAACTCAGAGTTGACAGGACCTTAAAAGTCACCCCACCCAGCTGCCACTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCATGCAAACTGAGCTCCTaGTCTTCAGGCCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSCKLSS*SSGPAQ
Trigger: TTGTGCGGGGCCTGAAGAGCAGGAGCTCAGTTTGCA...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp AGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGACCTCAGCTCCGCGCCTaGGGCTCTGCGTGCCACGCT +
Preference number: 4 (lower is better)
Translates to: SEYPVMRGAHTADRSLLGPQLRA*GSACHA
Trigger: AGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGG...TCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR CCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGGCACCAGCGTGTGGTTaGTCACACACTGGGACCACG +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMAPACG*SHTGTT
Trigger: CGTGGTCCCAGTGTGTGACCAACCACACGCTGGTGC...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCACTGCTGAGGGACTCTTaGTGGGTGAGAGAAGTACCT +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSLLRDS*WVREVP
Trigger: AGGTACTTCTCTCACCCAGCAAGAGTCCCTCAGCAG...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATACGCTCCAGGCGACCTaGGTCCCAGGGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHTLQAT*VPGRLR
Trigger: GCGGAGGCGCCCTGGGACTCAGGTCGCCTGGAGCGT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR TCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGCTCGGCTGTCAGTCCTaGGAGTCTGAGAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMLGCQS*ESESFH
Trigger: GTGGAAACTCTCAGACTCTCAGGACTGACAGCCGAG...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAACTGCCAACGCTGCCTaGGACTCCAATAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSTANAA*DSNNVP
Trigger: AGGAACATTATTGGAGTCGCAGGCAGCGTTGGCAGT...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGTGGTGGCGGGAACCTaGGACTGGCCGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGVVAGT*DWPARG
Trigger: GCCCCTCGCCGGCCAGTCCCAGGTTCCCGCCACCAC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS-3UTR TCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCATCTAAGTCTTGGAGCTaGGGGGTGTATGAGTACTGT +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSSKSWS*GVYEYC
Trigger: ACAGTACTCATACACCCCTCAGCTCCAAGACTTAGA...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGCCTGGGGCTCTGCGTaGCACGCTCCAGGCGACCTG +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHAWGSA*HAPGDL
Trigger: CAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAGCGAGGCGAGTGCATTaGAAAGAGATTCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSARRVH*KEILVF
Trigger: GAATACCAGAATCTCTTTGCAATGCACTCGCCTCGC...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAAATGAGCGAGGCGAGTaGATTGCAAAGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSNERGE*IAKRFW
Trigger: CCAGAATCTCTTTGCAATGCACTCGCCTCGCTCATT...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR CCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCATCTCTTCCACTTCTCTaGAGCTGTCAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSSLPLL*SCQDNR
Trigger: TCTGTTGTCCTGACAGCTCCAGAGAAGTGGAAGAGA...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCACAGGTACTTTATGGCTaGGATCAAAGGGGTGACTCA +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSQVLYG*DQRGDS
Trigger: TGAGTCACCCCTTTGATCCCAGCCATAAAGTACCTG...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAACCCCGGCTACCCAGCTaGATGGCAGCGCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKPRLPS*MAARGQ
Trigger: CTGCCCTCGCGCTGCCATCCAGCTGGGTAGCCGGGG...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR TCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAGAGTGTGTGATATCATaGAGGTCTGTGCCTGATGTA +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSECVIS*RSVPDV
Trigger: TACATCAGGCACAGACCTTCATGATATCACACACTC...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp GAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCCCGCGCCTGGGGCTCTaGGTGCCACGCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: ENNSKQHMDRVLIHCPGSPRLGL*VPRSRR
Trigger: TCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGG...GGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR GCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCCGCGCCTGGGGCTCTaGGTGCCACGCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYPRLGL*VPRSRR
Trigger: TCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAACGGCGAGGGGGCCCTaGGACGAAGGACTCCACGTG +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKTARGP*DEGLHV
Trigger: CACGTGGAGTCCTTCGTCCCAGGGCCCCCTCGCCGT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATACGGCGAGGGGGCCCTaGGACGAAGGACTCCACGTG +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHTARGP*DEGLHV
Trigger: CACGTGGAGTCCTTCGTCCCAGGGCCCCCTCGCCGT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp ATCTCTCTACACTCCAATAACAACACCATATCCTGTCAACAGAGTTTCTGTAAAACGCTCCAGGCGACCTaGGTCCCAGGGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ISLHSNNNTISCQQSFCKTLQAT*VPGRLR
Trigger: GCGGAGGCGCCCTGGGACTCAGGTCGCCTGGAGCGT...TTTACAGAAACTCTGTTGACAGGATATGGTGTTGTTATTGGAGTGTAGAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTCGGCTCCAGCCAGGTaGGCACCAGCGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHSAPAR*APACGW
Trigger: CCAACCACACGCTGGTGCTCACCTGGCTGGAGCCGA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTTGCTTCTCAGAAGGCTaGGCACGGCGAGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTACFSEG*ARRGGP
Trigger: AGGGCCCCCTCGCCGTGCTCAGCCTTCTGAGAAGCA...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGTGCTTCTCAGAAGGCTaGGCACGGCGAGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGCFSEG*ARRGGP
Trigger: AGGGCCCCCTCGCCGTGCTCAGCCTTCTGAGAAGCA...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCCAGATTCACATGCACCTCAGCTCCGCGCCTaGGGCTCTGCGTGCCACGCT +
Preference number: 4 (lower is better)
Translates to: FILCGVSFEHHDFPDSHAPQLRA*GSACHA
Trigger: AGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGG...TGCATGTGAATCTGGGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCCTCAGCTCCGCGCCTaGGGCTCTGCGTGCCACGCT +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYPQLRA*GSACHA
Trigger: AGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR CCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGTGGTTGGTCACACACTaGGACCACGTTCTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMWLVTH*DHVLFD
Trigger: ATCAAACAGAACGTGGTCCCAGTGTGTGACCAACCA...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTGACCAGGGTCGTCGATaGCTCTTCCTCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTADQGRR*LFLRPL
Trigger: GAGGGGCCGGAGGAAGAGCCATCGACGACCCTGGTC...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAATTCTGCACCCAGTCTaGCAAACATTTATTGACTGC +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSILHPV*QTFIDC
Trigger: GCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAAT...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CTGAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTGCCTGGGGCTCTGCGTaGCACGCTCCAGGCGACCTG +
Preference number: 4 (lower is better)
Translates to: LRTILNNTWIEFLFIVLGAWGSA*HAPGDL
Trigger: CAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGC...ACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR GCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAATCCTCCGAGTCTGTGTaGTCCTGCGCCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKSSESV*SCARGS
Trigger: AGACCCCCTGGCGCAGGAGCACACAGACTCGGAGGA...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAGGCTACCCAGCTGGATaGCAGCGCGAGGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKGYPAG*QREGSS
Trigger: AGAACTGCCCTCGCGCTGCCATCCAGCTGGGTAGCC...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATTCGGCTCCAGCCAGGTaGGCACCAGCGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYSAPAR*APACGW
Trigger: CCAACCACACGCTGGTGCTCACCTGGCTGGAGCCGA...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCCTCCTCCTGCAAACTaGGCTCCTGCTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGPPPAN*APALQA
Trigger: GGCCTGAAGAGCAGGAGCTCAGTTTGCAGGAGGAGG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTAGGCTCGCAGCCCTCTaGATCCTGGTCGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTARLAAL*ILVEAG
Trigger: TCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCT...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGTCCTCCGAGTCTGTGTaGTCCTGCGCCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKSSESV*SCARGS
Trigger: AGACCCCCTGGCGCAGGAGCACACAGACTCGGAGGA...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGCATCAGTTTTCCATCTaGACATATAACCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMHQFSI*TYNPHS
Trigger: GGAATGGGGGTTATATGTGCAGATGGAAAACTGATG...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGGTTAAGAGACCTACATaGATGAACCAATCACACACG +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMVKRPT*MNQSHT
Trigger: CGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAAC...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp AGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGATCCTGTGATGAGAGGTaGTCACACAGCAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: SEYPVMRGAHTADRSLLGSCDER*SHSRQV
Trigger: GACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGA...TCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGACCAGGGTCGTCGATaGCTCTTCCTCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYDQGRR*LFLRPL
Trigger: GAGGGGCCGGAGGAAGAGCCATCGACGACCCTGGTC...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATCACAGCCTGCCAGTTTaGGGATCCCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHHSLPV*GSQSTR
Trigger: CCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTG...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGGGACCACGTTCTGTTTaGTTTAGTATTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMGPRSV*FSIQHR
Trigger: TCTGTGTTGAATACTAAATCAAACAGAACGTGGTCC...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAGGGACTCTTGCTGGGTaGGAGAAGTACCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKGTLAG*EKYLPC
Trigger: ACACGGAAGGTACTTCTCTCACCCAGCAAGAGTCCC...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGCCCCTACTAAATTATTaGGAGGACACTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMPLLNY*EDTFLT
Trigger: AGTCAGAAAAGTGTCCTCTCAATAATTTAGTAGGGG...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGATTCCAAAGAGTCTTTaGACGACTGCCTATTCGAAT +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMIPKSL*TTAYSN
Trigger: ATTCGAATAGGCAGTCGTTCAAAGACTCTTTGGAAT...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATTTGCGGGCCCAAGACTaGCAACGCTGCCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYLRAQD*QRCLRL
Trigger: GAGTCGCAGGCAGCGTTGGCAGTCTTGGGCCCGCAA...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTGAGTCTGTGTGCTCCTaGGCCAGGGGGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTAESVCS*ARGSKS
Trigger: AGACTTAGACCCCCTGGCGCAGGAGCACACAGACTC...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAGAGTCTTTGAACGACTaGCTATTCGAATGTTTAATA +
Preference number: 4 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSESLND*LFECLI
Trigger: TATTAAACATTCGAATAGGCAGTCGTTCAAAGACTC...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGGGGAATTTAAGAAGCTaGGTCTTTCTGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMGNLRS*VFLDHV
Trigger: AACATGATCCAGAAAGACGCAGCTTCTTAAATTCCC...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS-3UTR CCA 90 bp GTGCAGGGTAGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCAATACATCTTCTAAGGTaGTCTTCCCAGCAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VQGSEYPVMRGAHTADRSIHLLR*SSQQSL
Trigger: TAAGGACTGCTGGGAAGACCACCTTAGAAGATGTAT...TGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACTACCCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATAGGCTCGCAGCCCTCTaGATCCTGGTCGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYRLAAL*ILVEAG
Trigger: TCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCT...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGACTCCAGAGGCCCACCATCATTGTTAAGAGACCTACATGCATGATGAAGGTCTGTGCCTaGTGTATTCACTCAAAATAT +
Preference number: 4 (lower is better)
Translates to: PAPGLQRPTIIVKRPTCMMKVCA*CIHSKY
Trigger: ATATTTTGAGTGAATACATCAGGCACAGACCTTCAT...CATGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCTGGAGTCCAGGGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTCAGTCCTGAGAGTCTaGGAGTTTCCACCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHSVLRV*EFPPLG
Trigger: CCCGAGAGGTGGAAACTCTCAGACTCTCAGGACTGA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR GCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAACTGCTGAGGGACTCTTaGTGGGTGAGAGAAGTACCT +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKLLRDS*WVREVP
Trigger: AGGTACTTCTCTCACCCAGCAAGAGTCCCTCAGCAG...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTTGCAAACTGAGCTCCTaGTCTTCAGGCCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTACKLSS*SSGPAQ
Trigger: TTGTGCGGGGCCTGAAGAGCAGGAGCTCAGTTTGCA...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGTGGACACCTCCTCCTaGAAACTGAGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGVDTSS*KLSSCS
Trigger: AGAGCAGGAGCTCAGTTTGCAGGAGGAGGTGTCCAC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAGTGGACACCTCCTCCTaGAAACTGAGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKVDTSS*KLSSCS
Trigger: AGAGCAGGAGCTCAGTTTGCAGGAGGAGGTGTCCAC...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGCACCAGCGTGTGGTTaGTCACACACTGGGACCACG +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYAPACG*SHTGTT
Trigger: CGTGGTCCCAGTGTGTGACCAACCACACGCTGGTGC...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATCAGCCCTCTGAATCCTaGTCGAAGCTGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHQPSES*SKLDSE
Trigger: TTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTG...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATTCCTGGTGGCCTGTCTaGAGCCGGCTCCTCATAGAG +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYSWWPV*SRLLIE
Trigger: CTCTATGAGGAGCCGGCTCCAGACAGGCCACCAGGA...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTTCATTTTCTCCTGGTaGCCTGTCTGGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHFIFSW*PVWSRL
Trigger: GAGCCGGCTCCAGACAGGCCACCAGGAGAAAATGAA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGGTTTCATTTTCTCCTaGTGGCCTGTCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHGFIFS*WPVWSR
Trigger: CCGGCTCCAGACAGGCCACCAGGAGAAAATGAAACC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCTGGGATCAAAGGGGTaGCTCACTTGTTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGLGSKG*LTCLHR
Trigger: CCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp AGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGAGTCATTACTTGGAAGTaGTGCTGCAGAGGACAATCA +
Preference number: 4 (lower is better)
Translates to: SEYPVMRGAHTADRSLLGVITWK*CCRGQS
Trigger: TGATTGTCCTCTGCAGCATCACTTCCAAGTAATGAC...TCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR GCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAGAGTACTGTAACGTTTaGGGGCCCAAGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKEYCNV*GPKTAN
Trigger: GTTGGCAGTCTTGGGCCCGCAAACGTTACAGTACTC...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGAGTCTGTGTGCTCCTaGGCCAGGGGGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYESVCS*ARGSKS
Trigger: AGACTTAGACCCCCTGGCGCAGGAGCACACAGACTC...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATACCTCTCGGGGTTCATaGCCAGACCAACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYTSRGS*PDQPGH
Trigger: GTGACCTGGTTGGTCTGGGCATGAACCCCGAGAGGT...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR CCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAGTCAGTGCCACCTCTaGTGGGCCAATTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKSQCHL*WANLCF
Trigger: GAAACACAAATTGGCCCACCAGAGGTGGCACTGACT...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS-3UTR CCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTCTGAGGGACTCTTGCTaGGTGAGAGAAGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTALRDSC*VREVPS
Trigger: GGAAGGTACTTCTCTCACCCAGCAAGAGTCCCTCAG...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAACTGAGGGACTCTTGCTaGGTGAGAGAAGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKLRDSC*VREVPS
Trigger: GGAAGGTACTTCTCTCACCCAGCAAGAGTCCCTCAG...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGCAGCCCTCTGAATCCTaGTCGAAGCTGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKQPSES*SKLDSE
Trigger: TTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTG...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGGGTTTCATTTTCTCCTaGTGGCCTGTCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKGFIFS*WPVWSR
Trigger: CCGGCTCCAGACAGGCCACCAGGAGAAAATGAAACC...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGAAGCTGCGTCTTTCTaGATCATGTTCCTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGEAASF*IMFLRG
Trigger: GCCCCGAAGGAACATGATCCAGAAAGACGCAGCTTC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS-3UTR TCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGCTGGGATCAAAGGGGTaGCTCACTTGTTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKLGSKG*LTCLHR
Trigger: CCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAG...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAACAGAGTACACCCACCTaGATAAATTCTGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKQSTPT*INSAPS
Trigger: ACTGGGTGCAGAATTTATTCAGGTGGGTGTACTCTG...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp AGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGAAGGTCCTGTCAACTCTaGGTTTCTACATCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SEYPVMRGAHTADRSLLGRSCQL*VSTSKG
Trigger: TCCTTTTGATGTAGAAACTCAGAGTTGACAGGACCT...TCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATACTGCCAACGCTGCCTaGGACTCCAATAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHTANAA*DSNNVP
Trigger: AGGAACATTATTGGAGTCGCAGGCAGCGTTGGCAGT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGGAGTACTGTAACGTTTaGGGGCCCAAGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKEYCNV*GPKTAN
Trigger: GTTGGCAGTCTTGGGCCCGCAAACGTTACAGTACTC...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATAAGGAATACACAGCCTaGCAGTTTGGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHKEYTA*QFGDPS
Trigger: ACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAATTGACTGCTTTCTCTaGATAGAACAACCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKIDCFL*IEQPAS
Trigger: GCTGGCCGGTTGTTCTATGCAGAGAAAGCAGTCAAT...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATTTCATTTTCTCCTGGTaGCCTGTCTGGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYFIFSW*PVWSRL
Trigger: GAGCCGGCTCCAGACAGGCCACCAGGAGAAAATGAA...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGCCCTTTCGGGGAGTTTaGCTTTTAAAGCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGPFRGV*LLKRGS
Trigger: AGATCCGCGCTTTAAAAGCCAAACTCCCCGAAAGGG...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS-3UTR TCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTCTAAGTCTTGGAGCTaGGGGGTGTATGAGTACTGT +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHSKSWS*GVYEYC
Trigger: ACAGTACTCATACACCCCTCAGCTCCAAGACTTAGA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAAGAGACCTACATGCATaGACCAATCACACACGTGCT +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKRDLHA*TNHTRA
Trigger: AGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGAGAGACCTACATGCATaGACCAATCACACACGTGCT +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGRDLHA*TNHTRA
Trigger: AGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTAATCACGAAAGGTCATaGCCCCAGAATCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTANHERS*PQNPSL
Trigger: GAGAGATGGATTCTGGGGTCATGACCTTTCGTGATT...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAAATCACGAAAGGTCATaGCCCCAGAATCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKNHERS*PQNPSL
Trigger: GAGAGATGGATTCTGGGGTCATGACCTTTCGTGATT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp AGTGAGTATCCTGTGATGAGAGGTGCTCACACAGCAGACAGGTCATTACTTGGACATCAAAAGGAATTCTaGGAGTGGCAAAGTCATAGA +
Preference number: 4 (lower is better)
Translates to: SEYPVMRGAHTADRSLLGHQKEF*EWQSHR
Trigger: TCTATGACTTTGCCACTCTCAGAATTCCTTTTGATG...TCCAAGTAATGACCTGTCTGCTGTGTGAGCACCTCTCATCACAGGATACTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAATCTCTTCCACTTCTCTaGAGCTGTCAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKSLPLL*SCQDNR
Trigger: TCTGTTGTCCTGACAGCTCCAGAGAAGTGGAAGAGA...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGTGGTTGGTCACACACTaGGACCACGTTCTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGWLVTH*DHVLFD
Trigger: ATCAAACAGAACGTGGTCCCAGTGTGTGACCAACCA...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATAATCCTGGTCGAAGCTaGACAGCGAAGGAATACACA +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHNPGRS*TAKEYT
Trigger: TGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAACAGGTACTTTATGGCTaGGATCAAAGGGGTGACTCA +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKQVLYG*DQRGDS
Trigger: TGAGTCACCCCTTTGATCCCAGCCATAAAGTACCTG...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGAGTGTGTGATATCATaGAGGTCTGTGCCTGATGTA +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHECVIS*RSVPDV
Trigger: TACATCAGGCACAGACCTTCATGATATCACACACTC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGGTAGCCAAGAGTGTGTaGTATCATGAAGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKVAKSV*YHEGLC
Trigger: GCACAGACCTTCATGATATCACACACTCTTGGCTAC...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGTATTCAGGCCGGTCTaGTGGTCAGTTAAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGVFRPV*WSVKVQ
Trigger: TTGAACTTTAACTGACCATCAGACCGGCCTGAATAC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATCTGGGTGTTTCTCTTTaGCAACGTGGATATATCGGT +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHLGVSL*QRGYIG
Trigger: ACCGATATATCCACGTTGGCAAAGAGAAACACCCAG...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATAAGGAATACACAGCCTaGCAGTTTGGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYKEYTA*QFGDPS
Trigger: ACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTT...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAGGTGACTCACTTGTTTaGACAGGAAACAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKGDSLV*TGNKRQ
Trigger: TTGCCTTTTGTTTCCTGTGCAAACAAGTGAGTCACC...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTGAGGTTTTCACATaGGACCAACTTACCACCAAC +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHVEVFT*DQLTTN
Trigger: GTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAAC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGGATCTTTCAAAGTCCTaGCACACTGCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGDLSKS*HTASQK
Trigger: CTTCTGAGAAGCAGTGTGCCAGGACTTTGAAAGATC...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAATAATGTTCCTTGTGTaGACACCTCCTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKIMFLV*TPPPAN
Trigger: GTTTGCAGGAGGAGGTGTCCACACAAGGAACATTAT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGATAATGTTCCTTGTGTaGACACCTCCTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGIMFLV*TPPPAN
Trigger: GTTTGCAGGAGGAGGTGTCCACACAAGGAACATTAT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAATTCTGCACCCAGTCTaGCAAACATTTATTGACTGC +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKILHPV*QTFIDC
Trigger: GCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAAT...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGTAGCCAAGAGTGTGTaGTATCATGAAGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYVAKSV*YHEGLC
Trigger: GCACAGACCTTCATGATATCACACACTCTTGGCTAC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAGAGAGGACACTTTTCTaGCTACAAAAGAATACTCGT +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKERTLF*LQKNTR
Trigger: ACGAGTATTCTTTTGTAGTCAGAAAAGTGTCCTCTC...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTGGTGACTCACTTGTTTaGACAGGAAACAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTAGDSLV*TGNKRQ
Trigger: TTGCCTTTTGTTTCCTGTGCAAACAAGTGAGTCACC...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATATTGACTGCTTTCTCTaGATAGAACAACCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYIDCFL*IEQPAS
Trigger: GCTGGCCGGTTGTTCTATGCAGAGAAAGCAGTCAAT...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATCACCTGAATAAATTCTaGACCCAGTCTGGCAAACAT +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHHLNKF*TQSGKH
Trigger: ATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTG...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGGTTGAGGTTTTCACATaGGACCAACTTACCACCAAC +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKVEVFT*DQLTTN
Trigger: GTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAAC...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTCACTTTCAGCCCATTTaGAACACTTTGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTAHFQPI*NTLFPK
Trigger: TTTGGGGAACAAAGTGTTCCAAATGGGCTGAAAGTG...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS-3UTR CCA 90 bp GAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCTCTCTTCCACTTCTCTaGAGCTGTCAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: ENNSKQHMDRVLIHCPGSSLPLL*SCQDNR
Trigger: TCTGTTGTCCTGACAGCTCCAGAGAAGTGGAAGAGA...GGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAAACAGGAAGGTCTTCTaGATTTCTCTTCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKNRKVF*ISLPLL
Trigger: GAGAAGTGGAAGAGAAATCCAGAAGACCTTCCTGTT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTAACAGGAAGGTCTTCTaGATTTCTCTTCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTANRKVF*ISLPLL
Trigger: GAGAAGTGGAAGAGAAATCCAGAAGACCTTCCTGTT...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATAATCCTGGTCGAAGCTaGACAGCGAAGGAATACACA +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYNPGRS*TAKEYT
Trigger: TGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATT...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAGGACCACGTTCTGTTTaGTTTAGTATTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKGPRSV*FSIQHR
Trigger: TCTGTGTTGAATACTAAATCAAACAGAACGTGGTCC...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTCCCCTACTAAATTATTaGGAGGACACTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTAPLLNY*EDTFLT
Trigger: AGTCAGAAAAGTGTCCTCTCAATAATTTAGTAGGGG...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAATTCCAAAGAGTCTTTaGACGACTGCCTATTCGAAT +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKIPKSL*TTAYSN
Trigger: ATTCGAATAGGCAGTCGTTCAAAGACTCTTTGGAAT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCTGGGTGTTTCTCTTTaGCAACGTGGATATATCGGT +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYLGVSL*QRGYIG
Trigger: ACCGATATATCCACGTTGGCAAAGAGAAACACCCAG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAACCAATCACACACGTaGTATGAGAATAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKNQSHT*YENREK
Trigger: CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTT...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAATTTTACAGTGCTATGTaGATATGGGAAGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKFYSAM*IWEVPR
Trigger: TCTGGGTACTTCCCATATGCACATAGCACTGTAAAA...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTTTTTACAGTGCTATGTaGATATGGGAAGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTAFYSAM*IWEVPR
Trigger: TCTGGGTACTTCCCATATGCACATAGCACTGTAAAA...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TCTGTATATAGAACTTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCAGTCAGTGCCACCTCTaGTGGGCCAATTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SVYRTLFCAAYLLNIMTSSQCHL*WANLCF
Trigger: GAAACACAAATTGGCCCACCAGAGGTGGCACTGACT...GGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAAGTTCTATATACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGATCTTTCAAAGTCCTaGCACACTGCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYDLSKS*HTASQK
Trigger: CTTCTGAGAAGCAGTGTGCCAGGACTTTGAAAGATC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGATTGCAAAGAGATTCTaGTATTCAGGCCGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKIAKRF*YSGRSD
Trigger: ATCAGACCGGCCTGAATACCAGAATCTCTTTGCAAT...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR TCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTTAAGGCAAACCATATaGAGTTACTGCTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHLRQTI*SYCLSD
Trigger: ATCTGACAAGCAGTAACTTCATATGGTTTGCCTTAA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TTCATCAAAGTGAAGTGTACAATCTCTCTACACTCCAATAACAACACCATATCCCTACAGAGTGGTACATaGATGTATGCCCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: FIKVKCTISLHSNNNTISLQSGT*MYAPFH
Trigger: ATGGAATGGGGCATACATTCATGTACCACTCTGTAG...GGATATGGTGTTGTTATTGGAGTGTAGAGAGATTGTACACTTCACTTTGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATCATCAGTTTTCCATCTaGACATATAACCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYHQFSI*TYNPHS
Trigger: GGAATGGGGGTTATATGTGCAGATGGAAAACTGATG...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGTTAAGAGACCTACATaGATGAACCAATCACACACG +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYVKRPT*MNQSHT
Trigger: CGTGTGTGATTGGTTCATGCATGTAGGTCTCTTAAC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATTATCATGAAGGTCTGTaGCTGATGTATTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHYHEGL*LMYSLK
Trigger: TTTGAGTGAATACATCAGGCACAGACCTTCATGATA...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCCAGATTCACATGCATGGTACATGAATGTATaGCCCATTCCATTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FILCGVSFEHHDFPDSHAWYMNV*PIPFQA
Trigger: AGCCTGAAATGGAATGGGGCATACATTCATGTACCA...TGCATGTGAATCTGGGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR GCA 90 bp TTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCCAGATTCACATGCACTTCCCAGATTCACATaGAGAGAATCAATGCATCAG +
Preference number: 4 (lower is better)
Translates to: FILCGVSFEHHDFPDSHALPRFT*RESMHQ
Trigger: CTGATGCATTGATTCTCTGCATGTGAATCTGGGAAG...TGCATGTGAATCTGGGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp GAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCCACTTTCAGCCCATTTaGAACACTTTGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ENNSKQHMDRVLIHCPGSHFQPI*NTLFPK
Trigger: TTTGGGGAACAAAGTGTTCCAAATGGGCTGAAAGTG...GGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp TTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCCAGATTCACATGCAAACAGGAAGGTCTTCTaGATTTCTCTTCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: FILCGVSFEHHDFPDSHANRKVF*ISLPLL
Trigger: GAGAAGTGGAAGAGAAATCCAGAAGACCTTCCTGTT...TGCATGTGAATCTGGGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAACAAAATCAAATTTGCTaGGTGTTTCTCTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKQNQIC*VFLFAN
Trigger: GTTGGCAAAGAGAAACACCCAGCAAATTTGATTTTG...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp GAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCACATTAGCTACAGAGTaGTACATGAATGTATGCCCC +
Preference number: 4 (lower is better)
Translates to: ENNSKQHMDRVLIHCPGSTLATE*YMNVCP
Trigger: GGGGCATACATTCATGTACCACTCTGTAGCTAATGT...GGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp ATCTCTCTACACTCCAATAACAACACCATATCCTGTCAACAGAGTTTCTGTAAAAGCATGGTCAGGAACTaGACCAATGCTGAGAACAAT +
Preference number: 4 (lower is better)
Translates to: ISLHSNNNTISCQQSFCKSMVRN*TNAENN
Trigger: ATTGTTCTCAGCATTGGTCCAGTTCCTGACCATGCT...TTTACAGAAACTCTGTTGACAGGATATGGTGTTGTTATTGGAGTGTAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR TCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGATGAAGGTCTGTGCCTaGTGTATTCACTCAAAATAT +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKMKVCA*CIHSKY
Trigger: ATATTTTGAGTGAATACATCAGGCACAGACCTTCAT...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGAGAGGACACTTTTCTaGCTACAAAAGAATACTCGT +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYERTLF*LQKNTR
Trigger: ACGAGTATTCTTTTGTAGTCAGAAAAGTGTCCTCTC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp AAGAGACCTACATGCATGAACCAATCACACACGTGCTATGAGAATAGAGAAAAGTTAAGGCAAACCATATaGAGTTACTGCTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: KRPTCMNQSHTCYENREKLRQTI*SYCLSD
Trigger: ATCTGACAAGCAGTAACTTCATATGGTTTGCCTTAA...CTTTTCTCTATTCTCATAGCACGTGTGTGATTGGTTCATGCATGTAGGTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp CTGAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCATGCAGAGAATCAATaGATCAGGGTTGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LRTILNNTWIEFLFIVLGHAENQ*IRVVCS
Trigger: GGAACAAACAACCCTGATGCATTGATTCTCTGCATG...ACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGATATATCGGTAGATaGAATAGCCCATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYGYIGR*NSPSQK
Trigger: TTTCTGTGATGGGCTATTCCATCTACCGATATATCC...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGGATATATCGGTAGATaGAATAGCCCATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYGYIGR*NSPSQK
Trigger: TTTCTGTGATGGGCTATTCCATCTACCGATATATCC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATCATATTCATATTCAATaGCTGTTTTATCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYHIHIQ*LFYPGV
Trigger: TACCCCCGGATAAAACAGTCATTGAATATGAATATG...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCATATTCATATTCAATaGCTGTTTTATCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYHIHIQ*LFYPGV
Trigger: TACCCCCGGATAAAACAGTCATTGAATATGAATATG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR TCA 90 bp GAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCGCTTACCGTTCTGTTTaGTTTAGTATTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: ENNSKQHMDRVLIHCPGSAYRSV*FSIQHR
Trigger: TCTGTGTTGAATACTAAATCAAACAGAACGGTAAGC...GGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR TCA 90 bp TCTGTATATAGAACTTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCGAAAGACTGTGCAAGTaGAAGCTCTTCATCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SVYRTLFCAAYLLNIMTSERLCK*KLFIKV
Trigger: CACTTTGATGAAGAGCTTTCACTTGCACAGTCTTTC...GGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAAGTTCTATATACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CCA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATCAAAATCAAATTTGCTaGGTGTTTCTCTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYQNQIC*VFLFAN
Trigger: GTTGGCAAAGAGAAACACCCAGCAAATTTGATTTTG...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR GCA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGAGTCTTTGAACGACTaGCTATTCGAATGTTTAATA +
Preference number: 4 (lower is better)
Translates to: FHMRPTYHQPGICACFKYESLND*LFECLI
Trigger: TATTAAACATTCGAATAGGCAGTCGTTCAAAGACTC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS GCA 90 bp GGGGCCAAGCGCGGCCGCGCGGCCTCAGCTCCGCGCCTGGGGCTCTaGGTGCCACGCTCCAGGCGACCTGAGTCCCAGGGCGCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: GAKRGRAASAPRLGL*VPRSRRPESQGASA
Trigger: GGCGGAGGCGCCCTGGGACTCAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGGCCGCGCGGCCGCGCTTGGCCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000460306.1
ENST00000468393.5
CDS CCA 90 bp CGCCCGCTGGGGCCAAGCGCGGCCGCGCGGCCTCAGCTCCGCGCCTaGGGCTCTGCGTGCCACGCTCCAGGCGACCTGAGTCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RPLGPSAAARPQLRA*GSACHAPGDLSPRA
Trigger: CGCCCTGGGACTCAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGGCCGCGCGGCCGCGCTTGGCCCCAGCGGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000460306.1
ENST00000468393.5
CDS GCA 90 bp CCAAGCGCGGCCGCGCGGCCTCAGCTCCGCGCCTGGGGCTCTGCGTaGCACGCTCCAGGCGACCTGAGTCCCAGGGCGCCTCCGCCACAG +
Preference number: 5 (lower is better)
Translates to: PSAAARPQLRAWGSA*HAPGDLSPRAPPPQ
Trigger: CTGTGGCGGAGGCGCCCTGGGACTCAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGGCCGCGCGGCCGCGCTTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000460306.1
ENST00000468393.5
CDS CCA 90 bp ACACAGCCTGCCAGTTTGGGGATCCCAGTCGACCAGGGTCGTCGATaGCTCTTCCTCCGGCCCCTCCTCCGAGTCTGTGTGCTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: TQPASLGIPVDQGRR*LFLRPLLRVCVLLR
Trigger: GCGCAGGAGCACACAGACTCGGAGGAGGGGCCGGAGGAAGAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS TCA 90 bp ACCCTCCTCTCCGAGCCCATCCCCCTCAGAAGGCTCGCAGCCCTCTaGATCCTGGTCGAAGCTGGACAGCGAAGGAATACACAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TLLSEPIPLRRLAAL*ILVEAGQRRNTQPA
Trigger: GGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCTTCTGAGGGGGATGGGCTCGGAGAGGAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 90 bp CCTGGCACACTGCTTCTCAGAAGGCTGAGCACGGCGAGGGGGCCCTaGGACGAAGGACTCCACGTGTACGCAGTAAAGAGTGTTCGGCTC +
Preference number: 5 (lower is better)
Translates to: PGTLLLRRLSTARGP*DEGLHVYAVKSVRL
Trigger: GAGCCGAACACTCTTTACTGCGTACACGTGGAGTCCTTCGTCCCAGGGCCCCCTCGCCGTGCTCAGCCTTCTGAGAAGCAGTGTGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000468393.5
ENST00000541547.5
CDS CCA 90 bp TCCTGGTCGAAGCTGGACAGCGAAGGAATACACAGCCTGCCAGTTTaGGGATCCCAGTCGACCAGGGTCGTCGATGGCTCTTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SWSKLDSEGIHSLPV*GSQSTRVVDGSSSG
Trigger: GCCGGAGGAAGAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 90 bp TCTCCGAGCCCATCCCCCTCAGAAGGCTCGCAGCCCTCTGAATCCTaGTCGAAGCTGGACAGCGAAGGAATACACAGCCTGCCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: SPSPSPSEGSQPSES*SKLDSEGIHSLPVW
Trigger: CCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCTTCTGAGGGGGATGGGCTCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCAAGCACCAGCGTGTGGTaGGTCACACACTGGGACCAC +
Preference number: 5 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSSTSVW*VTHWDH
Trigger: GTGGTCCCAGTGTGTGACCAACCACACGCTGGTGCT...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS TCA 90 bp TCCGAGTCTGTGTGCTCCTGCGCCAGGGGGTCTAAGTCTTGGAGCTaGGGGGTGTATGAGTACTGTAACGTTTGCGGGCCCAAGACTGCC +
Preference number: 5 (lower is better)
Translates to: SESVCSCARGSKSWS*GVYEYCNVCGPKTA
Trigger: GGCAGTCTTGGGCCCGCAAACGTTACAGTACTCATACACCCCTCAGCTCCAAGACTTAGACCCCCTGGCGCAGGAGCACACAGACTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 90 bp CATCCCCCTCAGAAGGCTCGCAGCCCTCTGAATCCTGGTCGAAGCTaGACAGCGAAGGAATACACAGCCTGCCAGTTTGGGGATCCCAGT +
Preference number: 5 (lower is better)
Translates to: HPPQKARSPLNPGRS*TAKEYTACQFGDPS
Trigger: ACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCTTCTGAGGGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS TCA 90 bp AGGACTCCACGTGTACGCAGTAAAGAGTGTTCGGCTCCAGCCAGGTaGGCACCAGCGTGTGGTTGGTCACACACTGGGACCACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: RTPRVRSKECSAPAR*APACGWSHTGTTFC
Trigger: ACAGAACGTGGTCCCAGTGTGTGACCAACCACACGCTGGTGCTCACCTGGCTGGAGCCGAACACTCTTTACTGCGTACACGTGGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000468393.5
ENST00000541547.5
ENST00000635289.1
CDS GCA 90 bp CCTCTGAATCCTGGTCGAAGCTGGACAGCGAAGGAATACACAGCCTaGCAGTTTGGGGATCCCAGTCGACCAGGGTCGTCGATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PLNPGRSWTAKEYTA*QFGDPSRPGSSMAL
Trigger: AAGAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS TCA 90 bp CAGTTCTCGCGGATTTATAGTCCCCAGCCACTCGGCTGTCAGTCCTaGGAGTCTGAGAGTTTCCACCTCTCGGGGTTCATGCCCAGACCA +
Preference number: 5 (lower is better)
Translates to: QFSRIYSPQPLGCQS*ESESFHLSGFMPRP
Trigger: TGGTCTGGGCATGAACCCCGAGAGGTGGAAACTCTCAGACTCTCAGGACTGACAGCCGAGTGGCTGGGGACTATAAATCCGCGAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS GCA 90 bp TATGAGTACTGTAACGTTTGCGGGCCCAAGACTGCCAACGCTGCCTaGGACTCCAATAATGTTCCTTGTGTGGACACCTCCTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: YEYCNVCGPKTANAA*DSNNVPCVDTSSCK
Trigger: TTTGCAGGAGGAGGTGTCCACACAAGGAACATTATTGGAGTCGCAGGCAGCGTTGGCAGTCTTGGGCCCGCAAACGTTACAGTACTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS GCA 90 bp GTCACTAGGCAGGTAAAACCTCCTTCTGGTAATGAGCGAGGCGAGTaGATTGCAAAGAGATTCTGGTATTCAGGCCGGTCTGATGGTCAG +
Preference number: 5 (lower is better)
Translates to: VTRQVKPPSGNERGE*IAKRFWYSGRSDGQ
Trigger: CTGACCATCAGACCGGCCTGAATACCAGAATCTCTTTGCAATGCACTCGCCTCGCTCATTACCAGAAGGAGGTTTTACCTGCCTAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR CAA 90 bp CTTTCTCTGCATAGAACAACCGGCCAGCCCCTGGACTCCAGAGGCCCACCATCACCATTCCTCCATGAATaGCATGAGATAGGTTTCATT +
Preference number: 5 (lower is better)
Translates to: LSLHRTTGQPLDSRGPPSPFLHE*HEIGFI
Trigger: AATGAAACCTATCTCATGCAATTCATGGAGGAATGG...TGATGGTGGGCCTCTGGAGTCCAGGGGCTGGCCGGTTGTTCTATGCAGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATAGCACCAGCGTGTGGTaGGTCACACACTGGGACCAC +
Preference number: 5 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHSTSVW*VTHWDH
Trigger: GTGGTCCCAGTGTGTGACCAACCACACGCTGGTGCT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAACACAGCCTGCCAGTTaGGGGATCCCAGTCGACCAG +
Preference number: 5 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKTQPAS*GIPVDQ
Trigger: CTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGT...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGACACAGCCTGCCAGTTaGGGGATCCCAGTCGACCAG +
Preference number: 5 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGTQPAS*GIPVDQ
Trigger: CTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS GCA 90 bp AATAATGTTCCTTGTGTGGACACCTCCTCCTGCAAACTGAGCTCCTaGTCTTCAGGCCCCGCACAAATGTCAGTGGTTCTGACATCATAT +
Preference number: 5 (lower is better)
Translates to: NNVPCVDTSSCKLSS*SSGPAQMSVVLTSY
Trigger: ATATGATGTCAGAACCACTGACATTTGTGCGGGGCCTGAAGAGCAGGAGCTCAGTTTGCAGGAGGAGGTGTCCACACAAGGAACATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGCTGGGTGTTTCTCTTaGCCAACGTGGATATATCGG +
Preference number: 5 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHAGCFS*PTWIYR
Trigger: CCGATATATCCACGTTGGCAAAGAGAAACACCCAGC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATTCTGCTGAGGGACTCTaGCTGGGTGAGAGAAGTACC +
Preference number: 5 (lower is better)
Translates to: FHMRPTYHQPGICACFKYSAEGL*LGERST
Trigger: GGTACTTCTCTCACCCAGCAAGAGTCCCTCAGCAGA...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATTCTGCTGAGGGACTCTaGCTGGGTGAGAGAAGTACC +
Preference number: 5 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYSAEGL*LGERST
Trigger: GGTACTTCTCTCACCCAGCAAGAGTCCCTCAGCAGA...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp CTCACACAGCAGACAGGTCATTACTTGGAAGTGATGCTGCAGAGGACAATCAAGCTTAGTAAGCCCACGTaGTACAGAAGACATTGTAGA +
Preference number: 5 (lower is better)
Translates to: LTQQTGHYLEVMLQRTIKLSKPT*YRRHCR
Trigger: TCTACAATGTCTTCTGTACAACGTGGGCTTACTAAG...CTTGATTGTCCTCTGCAGCATCACTTCCAAGTAATGACCTGTCTGCTGTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS-3UTR CAA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGAGAGGCCCACCATCATaGTTAAGAGACCTACATGCA +
Preference number: 5 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGRGPPS*LRDLHA
Trigger: TGCATGTAGGTCTCTTAACAATGATGGTGGGCCTCT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAATCTCTCCTACCAGGGTaGTCTGCCTGTACCAATAAT +
Preference number: 5 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKSLLPG*SACTNN
Trigger: ATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGA...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATAGCGAGGCGAGTGCATaGCAAAGAGATTCTGGTATT +
Preference number: 5 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHSEASA*QRDSGI
Trigger: AATACCAGAATCTCTTTGCAATGCACTCGCCTCGCT...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS-3UTR CAA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATACCCTTTCGGGGAGTTaGGCTTTTAAAGCGCGGATC +
Preference number: 5 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYTLSGS*AFKARI
Trigger: GATCCGCGCTTTAAAAGCCAAACTCCCCGAAAGGGT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541547.5
CDS CCA 90 bp AGAATCAATGCATCAGGGTTGTTTGTTCCCACATTAGCTACAGAGTaGTACATGAATGTATGCCCCATTCCATTTCAGGCTTACCGTTCT +
Preference number: 5 (lower is better)
Translates to: RINASGLFVPTLATE*YMNVCPIPFQAYRS
Trigger: AGAACGGTAAGCCTGAAATGGAATGGGGCATACATTCATGTACCACTCTGTAGCTAATGTGGGAACAAACAACCCTGATGCATTGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CAA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGCTGGGTGTTTCTCTTaGCCAACGTGGATATATCGG +
Preference number: 5 (lower is better)
Translates to: FHMRPTYHQPGICACFKYAGCFS*PTWIYR
Trigger: CCGATATATCCACGTTGGCAAAGAGAAACACCCAGC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TACACCCACCTGAATAAATTCTGCACCCAGTCTGGCAAACATTTATTGACTGCTAAAGGGGTGACTCACTaGTTTGCACAGGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: YTHLNKFCTQSGKHLLTAKGVTH*FAQETK
Trigger: TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTT...AGCAGTCAATAAATGTTTGCCAGACTGGGTGCAGAATTTATTCAGGTGGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAAGCCCCTACTAAATTATaGAGAGGACACTTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: YFMAGIKGVTHLFAQETKAPTKL*RGHFSD
Trigger: GTCAGAAAAGTGTCCTCTCAATAATTTAGTAGGGGC...TTTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAATATTCCAAAGAGTCTTaGAACGACTGCCTATTCGAA +
Preference number: 5 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKYSKES*NDCLFE
Trigger: TTCGAATAGGCAGTCGTTCAAAGACTCTTTGGAATA...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATTCTCTCCTACCAGGGTaGTCTGCCTGTACCAATAAT +
Preference number: 5 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYSLLPG*SACTNN
Trigger: ATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGA...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp GAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCTGTGCGGCGTATCTTTaGAACATCATGACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: ENNSKQHMDRVLIHCPGSCAAYL*NIMTSQ
Trigger: CTGGGAAGTCATGATGTTCAAAAGATACGCCGCACA...GGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS GCA 90 bp TCTTTTGAACATCATGACTTCCCAGATTCACATGCAGAGAATCAATaGATCAGGGTTGTTTGTTCCCACATTAGCTACAGAGTGGTACAT +
Preference number: 5 (lower is better)
Translates to: SFEHHDFPDSHAENQ*IRVVCSHISYRVVH
Trigger: ATGTACCACTCTGTAGCTAATGTGGGAACAAACAACCCTGATGCATTGATTCTCTGCATGTGAATCTGGGAAGTCATGATGTTCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CAA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGAGGACATTCTTCATGTaGATGGATAAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGRTFFM*MDKKVM
Trigger: CATCACCTTCTTATCCATCAACATGAAGAATGTCCT...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TTTATTTTGTGCGGCGTATCTTTTGAACATCATGACTTCCCAGATTCACATGCAAGTAACTTTAACTCCTaGAAGACCCTCTGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: FILCGVSFEHHDFPDSHASNFNS*KTLWWS
Trigger: ACTCCACCAGAGGGTCTTCAAGGAGTTAAAGTTACT...TGCATGTGAATCTGGGAAGTCATGATGTTCAAAAGATACGCCGCACAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS-3UTR CAA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATAGTAACTTTAACTCCTaGAAGACCCTCTGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYSNFNS*KTLWWS
Trigger: ACTCCACCAGAGGGTCTTCAAGGAGTTAAAGTTACT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAAGAATCATCCGAGATATaGAGGGTGATAAAGTTAATC +
Preference number: 5 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKESSEI*RVIKLI
Trigger: GATTAACTTTATCACCCTCAATATCTCGGATGATTC...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp GTACTTTATGGCTGGGATCAAAGGGGTGACTCACTTGTTTGCACAGGAAACAAATCTTTTAGGTTAGTTTaGAGAGACAATAAGCCCCTA +
Preference number: 5 (lower is better)
Translates to: VLYGWDQRGDSLVCTGNKSFRLV*RDNKPL
Trigger: TAGGGGCTTATTGTCTCTCAAAACTAACCTAAAAGA...TTTGTTTCCTGTGCAAACAAGTGAGTCACCCCTTTGATCCCAGCCATAAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp ATAGTTGAGGTTTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGAATCATCCGAGATATaGAGGGTGATAAAGTTAATC +
Preference number: 5 (lower is better)
Translates to: IVEVFTCDQLTTNLVYVHESSEI*RVIKLI
Trigger: GATTAACTTTATCACCCTCAATATCTCGGATGATTC...ATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAAACCTCAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TTTCACATGCGACCAACTTACCACCAACCTGGTATATGTGCATGTTTTAAGTATGCCCCTACTAAATTATaGAGAGGACACTTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: FHMRPTYHQPGICACFKYAPTKL*RGHFSD
Trigger: GTCAGAAAAGTGTCCTCTCAATAATTTAGTAGGGGC...ATACTTAAAACATGCACATATACCAGGTTGGTGGTAAGTTGGTCGCATGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp CTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATGGGTCTTTTAGGTTAGTTTaGAGAGACAATAAGCCCCTA +
Preference number: 5 (lower is better)
Translates to: LSYQGCLPVPIISIRKYGSFRLV*RDNKPL
Trigger: TAGGGGCTTATTGTCTCTCAAAACTAACCTAAAAGA...CCCATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp AATTCTAAACAACACATGGATAGAGTTCTTATTCATTGTCCTGGGTCCTTGCTCATCAATGCATCAGGGTaGTTTGTTCCCACATTAGCT +
Preference number: 5 (lower is better)
Translates to: NSKQHMDRVLIHCPGSLLINASG*FVPTLA
Trigger: AGCTAATGTGGGAACAAACAACCCTGATGCATTGAT...GAGCAAGGACCCAGGACAATGAATAAGAACTCTATCCATGTGTTGTTTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS GCA 90 bp GTATTCAACACAGACACGTTATACTTCAGATTGGAGTATATTTGTTaGATGGAAACAGGAAGGTCTTCTGGATTTCTCTTCCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: VFNTDTLYFRLEYIC*METGRSSGFLFHFS
Trigger: AGAGAAGTGGAAGAGAAATCCAGAAGACCTTCCTGTTTCCATGCAACAAATATACTCCAATCTGAAGTATAACGTGTCTGTGTTGAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000468393.5
ENST00000541547.5
ENST00000635289.1
CDS-3UTR CAA 90 bp CATCTCTCCTACCAGGGTTGTCTGCCTGTACCAATAATATCAATAAGGAAATATAGGACATTCTTCATGTaGATGGATAAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: HLSYQGCLPVPIISIRKYRTFFM*MDKKVM
Trigger: CATCACCTTCTTATCCATCAACATGAAGAATGTCCT...ATATTTCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367748.4
ENST00000541547.5
CDS GCA 90 bp ATTCATTTCCATAAATCAAAATCAAATTTGCTGGGTGTTTCTCTTTaGCAACGTGGATATATCGGTAGATGGAATAGCCCATCACAGAAA +
Preference number: 5 (lower is better)
Translates to: IHFHKSKSNLLGVSL*QRGYIGRWNSPSQK
Trigger: TTTCTGTGATGGGCTATTCCATCTACCGATATATCCACGTTGGCAAAGAGAAACACCCAGCAAATTTGATTTTGATTTATGGAAATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS-3UTR CAA 90 bp TGGACCAATGCTGAGAACAATTCTAAACAACACATGGATAGAGTTCTTATTCATAGGACATTCTTCATGTaGATGGATAAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: WTNAENNSKQHMDRVLIHRTFFM*MDKKVM
Trigger: CATCACCTTCTTATCCATCAACATGAAGAATGTCCT...ATGAATAAGAACTCTATCCATGTGTTGTTTAGAATTGTTCTCAGCATTGGTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS GCA 72 bp GCCGCGCGGCCTCAGCTCCGCGCCTGGGGCTCTGCGTaGCACGCTCCAGGCGACCTGAGTCCCAGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: AARPQLRAWGSA*HAPGDLSPRAP
Trigger: AGGCGCCCTGGGACTCAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGGCCGCGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000460306.1
ENST00000468393.5
CDS CCA 72 bp GGGCCAAGCGCGGCCGCGCGGCCTCAGCTCCGCGCCTaGGGCTCTGCGTGCCACGCTCCAGGCGACCTGAGT +
Preference number: 6 (lower is better)
Translates to: GPSAAARPQLRA*GSACHAPGDLS
Trigger: ACTCAGGTCGCCTGGAGCGTGGCACGCAGAGCCCCAGGCGCGGAGCTGAGGCCGCGCGGCCGCGCTTGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000460306.1
ENST00000468393.5
CDS GCA 72 bp TTGGCTTTTAAAGCGCGGATCTCGCGACGCGCGGCTTaGAGGACTGCGGGGCCCGGCGGCCGAGACGCGGCA +
Preference number: 6 (lower is better)
Translates to: LAFKARISRRAA*RTAGPGGRDAA
Trigger: TGCCGCGTCTCGGCCGCCGGGCCCCGCAGTCCTGCAAGCCGCGCGTCGCGAGATCCGCGCTTTAAAAGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461799.1
ENST00000541547.5
ENST00000635289.1
CDS CCA 72 bp GCGGAGCCCCCACGCGCGCTCCCCCGGCTACCCAGCTaGATGGCAGCGCGAGGGCAGTTCTCGCGGATTTAT +
Preference number: 6 (lower is better)
Translates to: AEPPRALPRLPS*MAARGQFSRIY
Trigger: ATAAATCCGCGAGAACTGCCCTCGCGCTGCCATCCAGCTGGGTAGCCGGGGGAGCGCGCGTGGGGGCTCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS CCA 72 bp AGCCCCCACGCGCGCTCCCCCGGCTACCCAGCTGGATaGCAGCGCGAGGGCAGTTCTCGCGGATTTATAGTC +
Preference number: 6 (lower is better)
Translates to: SPHARSPGYPAG*QREGSSRGFIV
Trigger: GACTATAAATCCGCGAGAACTGCCCTCGCGCTGCCATCCAGCTGGGTAGCCGGGGGAGCGCGCGTGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS GCA 72 bp CTTAGCCCAAAGACCCAGGAGAGGACGGGAATACCCTaGCCGTCCCCAAGGCGCCGCCAGGAGCAACAGCAG +
Preference number: 6 (lower is better)
Translates to: LSPKTQERTGIP*PSPRRRQEQQQ
Trigger: CTGCTGTTGCTCCTGGCGGCGCCTTGGGGACGGGCAGGGTATTCCCGTCCTCTCCTGGGTCTTTGGGCTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460306.1
CDS CCA 72 bp GCCAGTTTGGGGATCCCAGTCGACCAGGGTCGTCGATaGCTCTTCCTCCGGCCCCTCCTCCGAGTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: ASLGIPVDQGRR*LFLRPLLRVCV
Trigger: CACACAGACTCGGAGGAGGGGCCGGAGGAAGAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS GCA 72 bp TGCAGGTTTAGGCAAACCACCAGAGACACAGGGAACTaGCCGTCCCCAAGGCGCCGCCAGGAGCAACAGCAG +
Preference number: 6 (lower is better)
Translates to: CRFRQTTRDTGN*PSPRRRQEQQQ
Trigger: CTGCTGTTGCTCCTGGCGGCGCCTTGGGGACGGGCAGTTCCCTGTGTCTCTGGTGGTTTGCCTAAACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000468393.5
CDS GCA 72 bp CCTGGTCGAAGCTGGACAGCGAAGGAATACACAGCCTaGCAGTTTGGGGATCCCAGTCGACCAGGGTCGTCG +
Preference number: 6 (lower is better)
Translates to: PGRSWTAKEYTA*QFGDPSRPGSS
Trigger: CGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CAA 90 bp ATCCTGGTCGAAGCTGGACAGCGAAGGAATACACAGCCTGCCAGTTaGGGGATCCCAGTCGACCAGGGTCGTCGATGGCTCTTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: ILVEAGQRRNTQPAS*GIPVDQGRRWLFLR
Trigger: CCGGAGGAAGAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS TCA 72 bp CGTGTACGCAGTAAAGAGTGTTCGGCTCCAGCCAGGTaGGCACCAGCGTGTGGTTGGTCACACACTGGGACC +
Preference number: 6 (lower is better)
Translates to: RVRSKECSAPAR*APACGWSHTGT
Trigger: GGTCCCAGTGTGTGACCAACCACACGCTGGTGCTCACCTGGCTGGAGCCGAACACTCTTTACTGCGTACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000468393.5
ENST00000541547.5
ENST00000635289.1
CDS TCA 72 bp GTGTGCTCCTGCGCCAGGGGGTCTAAGTCTTGGAGCTaGGGGGTGTATGAGTACTGTAACGTTTGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: VCSCARGSKSWS*GVYEYCNVCGP
Trigger: GGGCCCGCAAACGTTACAGTACTCATACACCCCTCAGCTCCAAGACTTAGACCCCCTGGCGCAGGAGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS TCA 72 bp TCCGAGCCCATCCCCCTCAGAAGGCTCGCAGCCCTCTaGATCCTGGTCGAAGCTGGACAGCGAAGGAATACA +
Preference number: 6 (lower is better)
Translates to: SEPIPLRRLAAL*ILVEAGQRRNT
Trigger: TGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCTTCTGAGGGGGATGGGCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 72 bp CCATCCCCCTCAGAAGGCTCGCAGCCCTCTGAATCCTaGTCGAAGCTGGACAGCGAAGGAATACACAGCCTG +
Preference number: 6 (lower is better)
Translates to: PSPSEGSQPSES*SKLDSEGIHSL
Trigger: CAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCTTCTGAGGGGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CAA 72 bp GAAGCTGGACAGCGAAGGAATACACAGCCTGCCAGTTaGGGGATCCCAGTCGACCAGGGTCGTCGATGGCTC +
Preference number: 6 (lower is better)
Translates to: EAGQRRNTQPAS*GIPVDQGRRWL
Trigger: GAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 72 bp AAGCTGGACAGCGAAGGAATACACAGCCTGCCAGTTTaGGGATCCCAGTCGACCAGGGTCGTCGATGGCTCT +
Preference number: 6 (lower is better)
Translates to: KLDSEGIHSLPV*GSQSTRVVDGS
Trigger: AGAGCCATCGACGACCCTGGTCGACTGGGATCCCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 72 bp CAGAAGGCTCGCAGCCCTCTGAATCCTGGTCGAAGCTaGACAGCGAAGGAATACACAGCCTGCCAGTTTGGG +
Preference number: 6 (lower is better)
Translates to: QKARSPLNPGRS*TAKEYTACQFG
Trigger: CCCAAACTGGCAGGCTGTGTATTCCTTCGCTGTCCAGCTTCGACCAGGATTCAGAGGGCTGCGAGCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS GCA 72 bp CCTTGTGTGGACACCTCCTCCTGCAAACTGAGCTCCTaGTCTTCAGGCCCCGCACAAATGTCAGTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: PCVDTSSCKLSS*SSGPAQMSVVL
Trigger: CAGAACCACTGACATTTGTGCGGGGCCTGAAGAGCAGGAGCTCAGTTTGCAGGAGGAGGTGTCCACACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS TCA 72 bp CGGATTTATAGTCCCCAGCCACTCGGCTGTCAGTCCTaGGAGTCTGAGAGTTTCCACCTCTCGGGGTTCATG +
Preference number: 6 (lower is better)
Translates to: RIYSPQPLGCQS*ESESFHLSGFM
Trigger: CATGAACCCCGAGAGGTGGAAACTCTCAGACTCTCAGGACTGACAGCCGAGTGGCTGGGGACTATAAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS GCA 72 bp TGTAACGTTTGCGGGCCCAAGACTGCCAACGCTGCCTaGGACTCCAATAATGTTCCTTGTGTGGACACCTCC +
Preference number: 6 (lower is better)
Translates to: CNVCGPKTANAA*DSNNVPCVDTS
Trigger: GGAGGTGTCCACACAAGGAACATTATTGGAGTCGCAGGCAGCGTTGGCAGTCTTGGGCCCGCAAACGTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CAA 72 bp GTGTTCGGCTCCAGCCAGGTGAGCACCAGCGTGTGGTaGGTCACACACTGGGACCACGTTCTGTTTGATTTA +
Preference number: 6 (lower is better)
Translates to: VFGSSQVSTSVW*VTHWDHVLFDL
Trigger: TAAATCAAACAGAACGTGGTCCCAGTGTGTGACCAACCACACGCTGGTGCTCACCTGGCTGGAGCCGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000468393.5
ENST00000541547.5
ENST00000635289.1
CDS GCA 72 bp CAGGTAAAACCTCCTTCTGGTAATGAGCGAGGCGAGTaGATTGCAAAGAGATTCTGGTATTCAGGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: QVKPPSGNERGE*IAKRFWYSGRS
Trigger: AGACCGGCCTGAATACCAGAATCTCTTTGCAATGCACTCGCCTCGCTCATTACCAGAAGGAGGTTTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS CCA 72 bp TTATCCGGGGGTATTGTTCTGCTGAGGGACTCTTGCTaGGTGAGAGAAGTACCTTCCGTGTTTTCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: LSGGIVLLRDSC*VREVPSVFSSE
Trigger: CTCTGAAGAAAACACGGAAGGTACTTCTCTCACCCAGCAAGAGTCCCTCAGCAGAACAATACCCCCGGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 72 bp CTCCATGAATTGCATGAGATAGGTTTCATTTTCTCCTaGTGGCCTGTCTGGAGCCGGCTCCTCATAGAGTCT +
Preference number: 6 (lower is better)
Translates to: LHELHEIGFIFS*WPVWSRLLIES
Trigger: AGACTCTATGAGGAGCCGGCTCCAGACAGGCCACCAGGAGAAAATGAAACCTATCTCATGCAATTCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 72 bp CATGAATTGCATGAGATAGGTTTCATTTTCTCCTGGTaGCCTGTCTGGAGCCGGCTCCTCATAGAGTCTAGA +
Preference number: 6 (lower is better)
Translates to: HELHEIGFIFSW*PVWSRLLIESR
Trigger: TCTAGACTCTATGAGGAGCCGGCTCCAGACAGGCCACCAGGAGAAAATGAAACCTATCTCATGCAATTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316649.10
ENST00000367748.4
ENST00000541547.5
CDS CCA 72 bp GGTAATGAGCGAGGCGAGTGCATTGCAAAGAGATTCTaGTATTCAGGCCGGTCTGATGGTCAGTTAAAGTTC +
Preference number: 6 (lower is better)
Translates to: GNERGECIAKRF*YSGRSDGQLKF
Trigger: GAACTTTAACTGACCATCAGACCGGCCTGAATACCAGAATCTCTTTGCAATGCACTCGCCTCGCTCATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367748.4
CDS CCA 72 bp GCATCAGGGTTGTTTGTTCCCACATTAGCTACAGAGTaGTACATGAATGTATGCCCCATTCCATTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: ASGLFVPTLATE*YMNVCPIPFQA
Trigger: AGCCTGAAATGGAATGGGGCATACATTCATGTACCACTCTGTAGCTAATGTGGGAACAAACAACCCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS CAA 72 bp TCCCAGATTCACATGCAGAGAATCAATGCATCAGGGTaGTTTGTTCCCACATTAGCTACAGAGTGGTACATG +
Preference number: 6 (lower is better)
Translates to: SQIHMQRINASG*FVPTLATEWYM
Trigger: CATGTACCACTCTGTAGCTAATGTGGGAACAAACAACCCTGATGCATTGATTCTCTGCATGTGAATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS CAA 90 bp ATCATGACTTCCCAGATTCACATGCAGAGAATCAATGCATCAGGGTaGTTTGTTCCCACATTAGCTACAGAGTGGTACATGAATGTATGC +
Preference number: 6 (lower is better)
Translates to: IMTSQIHMQRINASG*FVPTLATEWYMNVC
Trigger: GCATACATTCATGTACCACTCTGTAGCTAATGTGGGAACAAACAACCCTGATGCATTGATTCTCTGCATGTGAATCTGGGAAGTCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367746.3
CDS CAA 90 bp TTTAGTATTCAACACAGACACGTTATACTTCAGATTGGAGTATATTaGTTGCATGGAAACAGGAAGGTCTTCTGGATTTCTCTTCCACTT +
Preference number: 6 (lower is better)
Translates to: FSIQHRHVILQIGVY*LHGNRKVFWISLPL
Trigger: AAGTGGAAGAGAAATCCAGAAGACCTTCCTGTTTCCATGCAACAAATATACTCCAATCTGAAGTATAACGTGTCTGTGTTGAATACTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316649.10
ENST00000367746.3
ENST00000367748.4
ENST00000468393.5
ENST00000541547.5
ENST00000635289.1