RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL1RAP (Homo sapiens)

Ensembl gene IDs: ENSG00000196083

Ensembl transcript IDs: ENST00000072516.7, ENST00000317757.7, ENST00000342550.6, ENST00000412080.1, ENST00000412504.6, ENST00000413869.5, ENST00000422485.5, ENST00000422625.5, ENST00000422940.5, ENST00000434491.5, ENST00000439062.6, ENST00000443369.6, ENST00000447382.6, ENST00000453359.5, ENST00000461629.1, ENST00000465496.1, ENST00000473566.1, ENST00000476929.1

Found 967 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACTGCTAGACCGCCTGGGACTTTTCTTCACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTGCCCTGTGGATACTTGGATTTTTCC +
Preference number: 1 (lower is better)
Translates to: SLLDRLGLFFTGMAT*SCFQNLPCGYLDFS
Trigger: GGAAAAATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGTGAAGAAAAGTCCCAGGCGGTCTAGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR GCA 90 bp CAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATaGATACACCCTGTAAGCATCATAGCCCAAGTACACCTGACTGAC +
Preference number: 1 (lower is better)
Translates to: QLPPEPAPFHAAPWE*IHPVSIIAQVHLTD
Trigger: GTCAGTCAGGTGTACTTGGGCTATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR GCA 90 bp GAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTaGTCCCTGGGAATGCATACACCCTGTAAGCATCATAGCCCAAGT +
Preference number: 1 (lower is better)
Translates to: ELRPTASTRTSSFPC*SLGMHTPCKHHSPS
Trigger: ACTTGGGCTATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR GCA 90 bp GTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATaGTGCTCCCTGGGAATGCATACACCCTGTAAGCATCATAGCCCA +
Preference number: 1 (lower is better)
Translates to: VELRPTASTRTSSFP*CSLGMHTPCKHHSP
Trigger: TGGGCTATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR CCA 90 bp GTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTaGGAATGCATACACCCTGTAAGCATCATAGCCCAAGTACACCTG +
Preference number: 1 (lower is better)
Translates to: VLQLPPEPAPFHAAP*ECIHPVSIIAQVHL
Trigger: CAGGTGTACTTGGGCTATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR CCA 90 bp CTTCACTGGCATGGCCACCTGCAGCTGCTTCCAGAACCTGCCCTGTaGATACTTGGATTTTTCCCCTTTCCATTTAATGACCGTGAGCAC +
Preference number: 1 (lower is better)
Translates to: LHWHGHLQLLPEPAL*ILGFFPFPFNDREH
Trigger: GTGCTCACGGTCATTAAATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR TCA 90 bp CTTTCTTTCCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTaGCACTCATTGGGCCACAACTCACTAACAGCCACAGCTAATGTA +
Preference number: 1 (lower is better)
Translates to: LSFPTAHSLLLTGSH*HSLGHNSLTATANV
Trigger: TACATTAGCTGTGGCTGTTAGTGAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR TCA 90 bp TTGATGCTAACAATGTTAGGCAGTTTAGAGAACACTAGTTTACAGTaGGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTC +
Preference number: 1 (lower is better)
Translates to: LMLTMLGSLENTSLQ*DRERHVSLGGYVWF
Trigger: GAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGTTCTCTAAACTGCCTAACATTGTTAGCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR TCA 90 bp ATAAGGCATAACACTGATAGTGGGTCAGAGAATCTTCTCCCTCCTTaGGCTTCGGAGCCGCTTACATTACCCATTATTAATAGATTTGGA +
Preference number: 1 (lower is better)
Translates to: IRHNTDSGSENLLPP*ASEPLTLPIINRFG
Trigger: TCCAAATCTATTAATAATGGGTAATGTAAGCGGCTCCGAAGCTCAAGGAGGGAGAAGATTCTCTGACCCACTATCAGTGTTATGCCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR CCA 90 bp GAAATAACTATCTGTGCCTATGTCCCTATTCACATCAGTTCTAGATaGAGAGCATGTAAAATAAGCTGGTATCTGGCCATATTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: EITICAYVPIHISSR*RACKISWYLAIFSL
Trigger: AAGAGAAAATATGGCCAGATACCAGCTTATTTTACATGCTCTCCATCTAGAACTGATGTGAATAGGGACATAGGCACAGATAGTTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR CCA 90 bp ATTAAAAGAAACATTTTCAGTTACACTGCTTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCGAATGAG +
Preference number: 1 (lower is better)
Translates to: IKRNIFSYTALYHPK*MSVLLWLCIIQPNE
Trigger: CTCATTCGGCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAGCAGTGTAACTGAAAATGTTTCTTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGGGCCCAAGAAGAGTGTaGTCTTCTGAGGCCTTTAGA +
Preference number: 2 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGGPRRV*SSEAFR
Trigger: TCTAAAGGCCTCAGAAGAGCACACTCTTCTTGGGCC...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 2 (lower is better)
Translates to: PMAGYCLAVTMEALCTADPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGGCAACTTTCACATACTaGCCTTCTAGGGCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMATFTY*PSRAQE
Trigger: TTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGC...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR-3UTR GCA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCGGCCCAAGAAGAGTGTaGTCTTCTGAGGCCTTTAGA +
Preference number: 2 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLGPRRV*SSEAFR
Trigger: TCTAAAGGCCTCAGAAGAGCACACTCTTCTTGGGCC...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR CAA 90 bp GGCATGGCCACCTGCAGCTGCTTCCAGAACCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCATTTAATGACCGTGAGCACCGTCTTA +
Preference number: 2 (lower is better)
Translates to: GMATCSCFQNLPCGY*DFSPFHLMTVSTVL
Trigger: TAAGACGGTGCTCACGGTCATTAAATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 2 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR TCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTATTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCACCATGGAAGCTCTGTaGACAGCAGATGCCACTGCA +
Preference number: 2 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCTMEAL*TADATA
Trigger: TGCAGTGGCATCTGCTGTGCACAGAGCTTCCATGGT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGCTGCTTCCAGAACCTaGCCTGTGGATACTTGGATT +
Preference number: 2 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNAASRT*PVDTWI
Trigger: AATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTACCAGCTCCTTTCCATaGTGCTCCCTGGGAATGCAT +
Preference number: 2 (lower is better)
Translates to: TLVYSETENAMYPWVGMFTSSFP*CSLGMH
Trigger: ATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR-3UTR CCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SRPLRLTSALYNGATKTSTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 2 (lower is better)
Translates to: PMAGYCLAVTMEALCTADMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 2 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR CAA 90 bp GTGACAATTCCCCCAGGCAGACTGTCTCGGTCAAAGATGCACAGCTaGTATCCAAATTCATTCTCCAAAACTCCACGGAGGGTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: VTIPPGRLSRSKMHS*YPNSFSKTPRRVSN
Trigger: ATTACTGACCCTCCGTGGAGTTTTGGAGAATGAATTTGGATACAAGCTGTGCATCTTTGACCGAGACAGTCTGCCTGGGGGAATTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGGACAAGAGTTCCAGTaGTTTTTAATATTGTACCCA +
Preference number: 2 (lower is better)
Translates to: PMAGYCLAVTMEALCTADGQEFQ*FLILYP
Trigger: TGGGTACAATATTAAAAACCACTGGAACTCTTGTCC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR CAA 90 bp GTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACGTTGATGTTGCCCCGAGAGGCCATA +
Preference number: 2 (lower is better)
Translates to: VLALFSSFTFVSFTA*YCTKMTLMLPREAI
Trigger: TATGGCCTCTCGGGGCAACATCAACGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: PMAGYCLAVTMEALCTADKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 2 (lower is better)
Translates to: KLREGKNYDNYHSVSCELTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 2 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGGCTGCTCCCTGGGAATaGATACACCCTGTAAGCATC +
Preference number: 2 (lower is better)
Translates to: STGYLVRVACRFLITSFRAAPWE*IHPVSI
Trigger: GATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGC...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR CCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCAGAACCTGCCCTGTaGATACTTGGATTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEPEPAL*ILGFFP
Trigger: GGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR CAA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTaGTTCTCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAAT +
Preference number: 2 (lower is better)
Translates to: HYYGLDAVGLGAGAL*FSISPFVLIHHNVN
Trigger: ATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
3UTR-3UTR TCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 2 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 2 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTATAAATTACCTGAGATaGGGACAAGGGTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: SRPLRLTSALYNGATKTSINYLR*GQGWYR
Trigger: TCTATACCACCCTTGTCCTCATCTCAGGTAATTTAT...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACATAAATTACCTGAGATaGGGACAAGGGTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNINYLR*GQGWYR
Trigger: TCTATACCACCCTTGTCCTCATCTCAGGTAATTTAT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 2 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGCTGCTTCCAGAACCTaGCCTGTGGATACTTGGATT +
Preference number: 2 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHAASRT*PVDTWI
Trigger: AATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTACGATCTCGGCTCACTaGAACCTCCACCTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVTISAH*NLHLLG
Trigger: ACCTAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGT...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 2 (lower is better)
Translates to: SRPLRLTSALYNGATKTSMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 2 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCATAAATTACCTGAGATaGGGACAAGGGTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCINYLR*GQGWYR
Trigger: TCTATACCACCCTTGTCCTCATCTCAGGTAATTTAT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTACCATGGAAGCTCTGTaGACAGCAGATGCCACTGCA +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSTMEAL*TADATA
Trigger: TGCAGTGGCATCTGCTGTGCACAGAGCTTCCATGGT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 2 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: KLREGKNYDNYHSVSCELTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACCAGAACCTGCCCTGTaGATACTTGGATTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEPEPAL*ILGFFP
Trigger: GGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 2 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 2 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KLREGKNYDNYHSVSCELGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTGCCCTGTGGATACTTaGATTTTTCCCCTTTCCATT +
Preference number: 2 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPCPVDT*IFPLSI
Trigger: AATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 2 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp GCTTCATTGAAATGTATGGTACTGAACATCACATTCAATTTGGCATGTCAGGTCTCTTTCTTTCCCCACTaGCCATTCACTGTTACTGAC +
Preference number: 2 (lower is better)
Translates to: ASLKCMVLNITFNLACQVSFFPH*PFTVTD
Trigger: GTCAGTAACAGTGAATGGGCAGTGGGGAAAGAAAGA...GACCTGACATGCCAAATTGAATGTGATGTTCAGTACCATACATTTCAATGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR CCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 2 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTTCTCAGAAGCCTGAATaGGACGAAGGCACCTATTTC +
Preference number: 2 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVSQKPE*DEGTYF
Trigger: GAAATAGGTGCCTTCGTCCCATTCAGGCTTCTGAGA...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 2 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 2 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: EISFRLNLVWSLLQTLNESDFSY*LIWSKY
Trigger: ATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAGGCGTCTGCTTTTCTaGATGAAGCTCAAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSRRLLF*MKLKVS
Trigger: TGAGACTTTGAGCTTCATTCAGAAAAGCAGACGCCT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR TCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 2 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTCTGTGCACAGCAGATaGCACTGCAACCTAGATAAA +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSSVHSR*HCNLDK
Trigger: TTTATCTAGGTTGCAGTGGCATCTGCTGTGCACAGA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 2 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTATTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: KLREGKNYDNYHSVSCELLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAATAAATTACCTGAGATaGGGACAAGGGTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEINYLR*GQGWYR
Trigger: TCTATACCACCCTTGTCCTCATCTCAGGTAATTTAT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTCCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGTCTGTGCACAGCAGATaGCACTGCAACCTAGATAAA +
Preference number: 2 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVSVHSR*HCNLDK
Trigger: TTTATCTAGGTTGCAGTGGCATCTGCTGTGCACAGA...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTCTGTGCACAGCAGATaGCACTGCAACCTAGATAAA +
Preference number: 2 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSSVHSR*HCNLDK
Trigger: TTTATCTAGGTTGCAGTGGCATCTGCTGTGCACAGA...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 2 (lower is better)
Translates to: KLREGKNYDNYHSVSCELMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATGCCCTGTGGATACTTaGATTTTTCCCCTTTCCATT +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVCPVDT*IFPLSI
Trigger: AATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp CAAGGATGGATTATTCTTTACAAGAAGGGATTTAATAGAGGACAAGGCCTTTGGTTGTTCCCCCATCTTTaGAGTAGGAATCTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: QGWIILYKKGFNRGQGLWLFPHL*SRNLLV
Trigger: AACTAGAAGATTCCTACTCCAAAGATGGGGGAACAA...CCAAAGGCCTTGTCCTCTATTAAATCCCTTCTTGTAAAGAATAATCCATCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTATAAATTACCTGAGATaGGGACAAGGGTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSINYLR*GQGWYR
Trigger: TCTATACCACCCTTGTCCTCATCTCAGGTAATTTAT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCESDFSY*LIWSKY
Trigger: ATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 2 (lower is better)
Translates to: TVNSLRILMPKATLKATKVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR GCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCESGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGGACAAGAGTTCCAGTaGTTTTTAATATTGTACCCA +
Preference number: 2 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEGQEFQ*FLILYP
Trigger: TGGGTACAATATTAAAAACCACTGGAACTCTTGTCC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTACATGAGTCAGAAAAATaGCCTAAAAGAGTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVHESEK*PKRVFL
Trigger: CAGAAAGACTCTTTTAGGGCATTTTTCTGACTCATG...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: KLREGKNYDNYHSVSCELKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGGACAAGAGTTCCAGTaGTTTTTAATATTGTACCCA +
Preference number: 2 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVGQEFQ*FLILYP
Trigger: TGGGTACAATATTAAAAACCACTGGAACTCTTGTCC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 2 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 2 (lower is better)
Translates to: TVNSLRILMPKATLKATKSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR GCA 90 bp ATCTTTATTTTAGCTAGTAGGAAATTGAGGCTCAGAGAGACCATGTTCAAACAGAGAAATAACTATCTGTaGCTATGTCCCTATTCACAT +
Preference number: 2 (lower is better)
Translates to: IFILASRKLRLRETMFKQRNNYL*LCPYSH
Trigger: ATGTGAATAGGGACATAGGCACAGATAGTTATTTCT...CTGTTTGAACATGGTCTCTCTGAGCCTCAATTTCCTACTAGCTAAAATAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR GCA 72 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATaGTGCTCCCTGGGAATGCATACACCCTGTAAGCAT +
Preference number: 3 (lower is better)
Translates to: RPTASTRTSSFP*CSLGMHTPCKH
Trigger: ATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR GCA 72 bp CCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTaGTCCCTGGGAATGCATACACCCTGTAAGCATCAT +
Preference number: 3 (lower is better)
Translates to: PTASTRTSSFPC*SLGMHTPCKHH
Trigger: ATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 3 (lower is better)
Translates to: PMAGYCLAVTMEALCTADALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGAGCTCCAGGAGGGCTaGGGTTCCCTGGAGCACGTA +
Preference number: 3 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHELQEG*GSLEHV
Trigger: TACGTGCTCCAGGGAACCCAAGCCCTCCTGGAGCTC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLLPCGY*DFSPFH
Trigger: ATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAG...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGAGCTCCAGGAGGGCTaGGGTTCCCTGGAGCACGTA +
Preference number: 3 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEELQEG*GSLEHV
Trigger: TACGTGCTCCAGGGAACCCAAGCCCTCCTGGAGCTC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 3 (lower is better)
Translates to: PMAGYCLAVTMEALCTADKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: PMAGYCLAVTMEALCTADVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNLPCGY*DFSPFH
Trigger: ATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAG...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGATGACATACAGAGGGTaGGTAGAGATAGTAGCCACC +
Preference number: 3 (lower is better)
Translates to: YSETENAMYPWVGMFGSLMTYRG*VEIVAT
Trigger: GGTGGCTACTATCTCTACCAACCCTCTGTATGTCAT...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR-3UTR CAA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 3 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTCTCAATCTCTCCTTTaGTCCTTATTCACCACAATG +
Preference number: 3 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALSQSLL*SLFTTM
Trigger: CATTGTGGTGAATAAGGACAAAAGGAGAGATTGAGA...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
3UTR-3UTR CAA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGGTTGATCCACAAGTCTaGACTTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: STGYLVRVACRFLITSFRVDPQV*TSQSAG
Trigger: CCCAGCACTTTGGGAAGTCAAGACTTGTGGATCAAC...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR TCA 72 bp AACACTGATAGTGGGTCAGAGAATCTTCTCCCTCCTTaGGCTTCGGAGCCGCTTACATTACCCATTATTAAT +
Preference number: 3 (lower is better)
Translates to: NTDSGSENLLPP*ASEPLTLPIIN
Trigger: ATTAATAATGGGTAATGTAAGCGGCTCCGAAGCTCAAGGAGGGAGAAGATTCTCTGACCCACTATCAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR GCA 72 bp TTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGCCTGGGACTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: FHTFFKDEYERP*SSLLDRLGLFF
Trigger: GAAGAAAAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR CCA 72 bp CTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTaGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTG +
Preference number: 3 (lower is better)
Translates to: LVYSETENAMYP*VGMFGSLRKNV
Trigger: CACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
3UTR-3UTR CAA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACCTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 3 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNLNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 3 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAAAATGACGTTGATGTaGCCCCGAGAGGCCATATTT +
Preference number: 3 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPKMTLM*PREAIF
Trigger: AAATATGGCCTCTCGGGGCAACATCAACGTCATTTT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGAAAATGACGTTGATGTaGCCCCGAGAGGCCATATTT +
Preference number: 3 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEKMTLM*PREAIF
Trigger: AAATATGGCCTCTCGGGGCAACATCAACGTCATTTT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTATGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: KLREGKNYDNYHSVSCELCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR TCA 72 bp ACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATaGGCAATGCGATATAAGCAGATAGGGAGAAGGAAT +
Preference number: 3 (lower is better)
Translates to: TEPSMEPPANSK*AMRYKQIGRRN
Trigger: ATTCCTTCTCCCTATCTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 3 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLLNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 3 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 3 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp GCTTCATTGAAATGTATGGTACTGAACATCACATTCAATTTGGCATGTCAGGTCATGACATACAGAGGGTaGGTAGAGATAGTAGCCACC +
Preference number: 3 (lower is better)
Translates to: ASLKCMVLNITFNLACQVMTYRG*VEIVAT
Trigger: GGTGGCTACTATCTCTACCAACCCTCTGTATGTCAT...GACCTGACATGCCAAATTGAATGTGATGTTCAGTACCATACATTTCAATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR CAA 90 bp CAAGGATGGATTATTCTTTACAAGAAGGGATTTAATAGAGGACAAGGCCTTTGGGCTGTAGGTTTTCTGTaGAGCTTCGTCCTACAGCTT +
Preference number: 3 (lower is better)
Translates to: QGWIILYKKGFNRGQGLWAVGFL*SFVLQL
Trigger: AAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGC...CCAAAGGCCTTGTCCTCTATTAAATCCCTTCTTGTAAAGAATAATCCATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: KLREGKNYDNYHSVSCELKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 3 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 3 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGATATGTGTTCTTCAGTaGCTTAGAGGGCCAATGATC +
Preference number: 3 (lower is better)
Translates to: STGYLVRVACRFLITSFRICVLQ*LRGPMI
Trigger: GATCATTGGCCCTCTAAGCAACTGAAGAACACATAT...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
3UTR-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 3 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPLNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 3 (lower is better)
Translates to: KLREGKNYDNYHSVSCELALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 3 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 3 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 3 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 3 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 3 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 3 (lower is better)
Translates to: KLREGKNYDNYHSVSCELLNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 3 (lower is better)
Translates to: KLREGKNYDNYHSVSCELKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 3 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: KLREGKNYDNYHSVSCELVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 3 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 3 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 3 (lower is better)
Translates to: TVNSLRILMPKATLKATKVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: TVNSLRILMPKATLKATKVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 3 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR CCA 72 bp AACATTTTCAGTTACACTGCTTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGGTTATGTATTATACAG +
Preference number: 3 (lower is better)
Translates to: NIFSYTALYHPK*MSVLLWLCIIQ
Trigger: CTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAGCAGTGTAACTGAAAATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
3UTR TCA 72 bp AACAAAACAACTTTCATTGACAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTATATTTCCTGCACTAGT +
Preference number: 3 (lower is better)
Translates to: NKTTFIDSDFSY*LIWSKYISCTS
Trigger: ACTAGTGCAGGAAATATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACTGTCAATGAAAGTTGTTTTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCAACCTGCAGCCCTCTCTaGGCTCTGAAGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPTCSPL*ALKFWG
Trigger: CCCCCAGAACTTCAGAGCTCAGAGAGGGCTGCAGGT...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACTGACCGGGAGCCACTaGCACTCATTGGGCCACAAC +
Preference number: 4 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPLTGSH*HSLGHN
Trigger: GTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAG...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADSVAGH*FLPRLW
Trigger: CCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGCACTGGGGCTGGTTATaGATCTCTGCCCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGHWGWL*ISARLL
Trigger: CAAGAGCCGGGCAGAGATTCATAACCAGCCCCAGTG...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCAACCTGCAGCCCTCTCTaGGCTCTGAAGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNATCSPL*ALKFWG
Trigger: CCCCCAGAACTTCAGAGCTCAGAGAGGGCTGCAGGT...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSSVAGH*FLPRLW
Trigger: CCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACT...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp GCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCGAGGACTTCCCTCGGTaGTTGGACATTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASTRTSSFPCCSLGMHTPEDFPR*LDIVPG
Trigger: CCCAGGCACAATGTCCAAGCACCGAGGGAAGTCCTC...GGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCACTTGGACATTGTGCCTaGGGCTGGAGGGCTACCTGC +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNALGHCA*GWRATC
Trigger: GCAGGTAGCCCTCCAGCCCCAGGCACAATGTCCAAG...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp GCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCACTTCCCTCGGTGCTTaGACATTGTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASTRTSSFPCCSLGMHTPTSLGA*TLCLGL
Trigger: CAGCCCCAGGCACAATGTCCAAGCACCGAGGGAAGT...GGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGCACAACAGCGGCAGGTaGCGGAGGACTTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKHNSGR*RRTSLG
Trigger: ACCGAGGGAAGTCCTCCGCCACCTGCCGCTGTTGTG...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCACTCCTTCACAGTAGGTaGCACAACAGCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNALLHSR*HNSGRW
Trigger: CCACCTGCCGCTGTTGTGTCACCTACTGTGAAGGAG...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGGCAAGGGCTGAGATCTaGGGAGCAGGGGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKARAEI*GAGGSN
Trigger: ATTGGAACCCCCTGCTCCCCAGATCTCAGCCCTTGC...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCTTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAAGACACAGACTCTTTaGGCTGAAGAATGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGKTQTL*AEECLG
Trigger: ACCCAGGCATTCTTCAGCTCAAAGAGTCTGTGTCTT...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGCCCTTCTCAGAAGCCTaGATGGGACGAAGGCACCTA +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKPFSEA*MGRRHL
Trigger: TAGGTGCCTTCGTCCCATTCAGGCTTCTGAGAAGGG...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTATGCCTGGGTGCGGGTaGTCAAGGGGACGGTACTCA +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAMPGCG*SRGRYS
Trigger: TGAGTACCGTCCCCTTGAGCACCCGCACCCAGGCAT...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATGCCGTCGGGCTAGGTaGTGGAGCTCTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSCRRAR*WSSLVL
Trigger: GAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCA...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTTGCCGTCGGGCTAGGTaGTGGAGCTCTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISCRRAR*WSSLVL
Trigger: GAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCA...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTTTCCTTCCGCGCCTCTaGCCAAAGCGGACCCCGGAG +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFFLPRL*PKRTPE
Trigger: CTCCGGGGTCCGCTTTGGCCAGAGGCGCGGAAGGAA...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAGAGCTGAAGAATGCCTaGGTGCGGGTGCTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVELKNA*VRVLKG
Trigger: CCCCTTGAGCACCCGCACCCAGGCATTCTTCAGCTC...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCAAGAAGTGTCATCCTTTaGGATATTAAAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPRSVIL*DIKGRG
Trigger: GCCCCTCCCTTTAATATCTCAAAGGATGACACTTCT...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACTCCTTCACAGTAGGTaGCACAACAGCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPLLHSR*HNSGRW
Trigger: CCACCTGCCGCTGTTGTGTCACCTACTGTGAAGGAG...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTGCCTTAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLRGPMIYLTWKSNAMCLSVAGH*FLPRLW
Trigger: CCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACT...AAGGCACATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNESSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMESSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGCTGCTTCCAGAACCTaGCCTGTGGATACTTGGATT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADAASRT*PVDTWI
Trigger: AATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAAGGCCCAAGAAGAGTGTaGTCTTCTGAGGCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: FVLQLPPEPAPFHAAPWEGPRRV*SSEAFR
Trigger: TCTAAAGGCCTCAGAAGAGCACACTCTTCTTGGGCC...TTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCAGCTCCTTTCCATGCTaGTCCCTGGGAATGCATACA +
Preference number: 4 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLSSFPC*SLGMHT
Trigger: TGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCT...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTTGCCGTCGGGCTAGGTaGTGGAGCTCTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVCRRAR*WSSLVL
Trigger: GAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCA...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTTACTATGGGTTAGATaGCGTCGGGCTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLLLWVR*RRARCW
Trigger: CCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGCGGACCCCGGAGACCTaGATCCCGGCAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNERTPET*IPAVFP
Trigger: GGGGAAGACTGCCGGGATCCAGGTCTCCGGGGTCCG...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072516.7
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCAGTGTCATCCTTTCTTaGGAAGCTGAGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLSVILS*EAERAQ
Trigger: CTGCGCCCTCTCAGCTTCCCAAGAAAGGATGACACT...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422940.5
CDS-3UTR CCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATCCAGAACCTGCCCTGTaGATACTTGGATTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADPEPAL*ILGFFP
Trigger: GGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGG...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGCACAACAGCGGCAGGTaGCGGAGGACTTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVHNSGR*RRTSLG
Trigger: ACCGAGGGAAGTCCTCCGCCACCTGCCGCTGTTGTG...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAGCAAGGGCTGAGATCTaGGGAGCAGGGGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVARAEI*GAGGSN
Trigger: ATTGGAACCCCCTGCTCCCCAGATCTCAGCCCTTGC...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGCACTGGGGCTGGTTATaGATCTCTGCCCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: YSETENAMYPWVGMFGSLHWGWL*ISARLL
Trigger: CAAGAGCCGGGCAGAGATTCATAACCAGCCCCAGTG...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGATGCCTGGGTGCGGGTaGTCAAGGGGACGGTACTCA +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVMPGCG*SRGRYS
Trigger: TGAGTACCGTCCCCTTGAGCACCCGCACCCAGGCAT...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGGGTGCTTGGACATTGTaGCTGGGGCTGGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVGAWTL*LGLEGY
Trigger: GTAGCCCTCCAGCCCCAGGCACAATGTCCAAGCACC...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGGGGGTTCCAATCTGGTaGCATTTTGTATCCATTGAG +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMGVPIW*HFVSIE
Trigger: CTCAATGGATACAAAATGGCACCAGATTGGAACCCC...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGCATCATGCTGCTCCCTGGGAATaGATACACCCTGTAAGCATC +
Preference number: 4 (lower is better)
Translates to: TSSFPCCSLGMHTPCKHHAAPWE*IHPVSI
Trigger: GATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGC...ATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTTTACTATGGGTTAGATaGCGTCGGGCTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISLLWVR*RRARCW
Trigger: CCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATTACTATGGGTTAGATaGCGTCGGGCTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSLLWVR*RRARCW
Trigger: CCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATCGGACCCCGGAGACCTaGATCCCGGCAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHRTPET*IPAVFP
Trigger: GGGGAAGACTGCCGGGATCCAGGTCTCCGGGGTCCG...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072516.7
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGGAGCTGAAGAATGCCTaGGTGCGGGTGCTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKELKNA*VRVLKG
Trigger: CCCCTTGAGCACCCGCACCCAGGCATTCTTCAGCTC...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGTTCCATGCTGCTCCCTaGGAATGCATACACCCTGTA +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKFHAAP*ECIHPV
Trigger: TACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAA...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATATCACCACGATCCTTTaGCTAGAGAGTGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADITTIL*LESGRA
Trigger: AGCTCTACCACTCTCTAGCCAAAGGATCGTGGTGAT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412504.6
CDS-3UTR CCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTGTAGTGTTCCTTTCTTaGGAAGCTGAGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISVVFLS*EAERAQ
Trigger: CTGCGCCCTCTCAGCTTCCCAAGAAAGGAACACTAC...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434491.5
CDS-3UTR TCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTACAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGCATCATCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: TSSFPCCSLGMHTPCKHHQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...ATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCAAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAGGCGTCTGCTTTTCTaGATGAAGCTCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADRRLLF*MKLKVS
Trigger: TGAGACTTTGAGCTTCATTCAGAAAAGCAGACGCCT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAGAAGTGTCATCCTTTaGGATATTAAAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADRSVIL*DIKGRG
Trigger: GCCCCTCCCTTTAATATCTCAAAGGATGACACTTCT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGAACGTGATCCAGACTaGTGTCAGACTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHAERDPD*CQTGKS
Trigger: GCTCTTCCCAGTCTGACATCAGTCTGGATCACGTTC...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATATCCATTGAGTTTCTaGCTCTTGGGGAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: FVLQLPPEPAPFHAAPWEYPLSF*LLGNRL
Trigger: AAGCCTGTTCCCCAAGAGTCAGAAACTCAATGGATA...TTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGGCAACTTTCACATACTaGCCTTCTAGGGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKATFTY*PSRAQE
Trigger: TTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGC...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR GCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCACTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCAGGAGCTGGCACTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPGAGTF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGTGCCAGCTCC...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGGAGGACTTCCCTCGGTaGTTGGACATTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKEDFPR*LDIVPG
Trigger: CCCAGGCACAATGTCCAAGCACCGAGGGAAGTCCTC...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATTTACTATGGGTTAGATaGCGTCGGGCTAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNLLWVR*RRARCW
Trigger: CCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: YSETENAMYPWVGMFGSLEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTATCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTCCAGAACCTGCCCTGTaGATACTTGGATTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLPEPAL*ILGFFP
Trigger: GGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGG...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGACTTCCCTCGGTGCTTaGACATTGTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKTSLGA*TLCLGL
Trigger: CAGCCCCAGGCACAATGTCCAAGCACCGAGGGAAGT...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCACAGGGGGTTCCAATCTaGTGCCATTTTGTATCCATT +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNAQGVPI*CHFVSI
Trigger: AATGGATACAAAATGGCACCAGATTGGAACCCCCTG...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCGTCGGGCTAGGTGCTaGAGCTCTCTTGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNRRARC*SSLVLN
Trigger: ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACG...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCGTCGGGCTAGGTGCTaGAGCTCTCTTGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVRRARC*SSLVLN
Trigger: ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACG...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
3UTR CAA 72 bp CCCCCAGGCAGACTGTCTCGGTCAAAGATGCACAGCTaGTATCCAAATTCATTCTCCAAAACTCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: PPGRLSRSKMHS*YPNSFSKTPRR
Trigger: CCTCCGTGGAGTTTTGGAGAATGAATTTGGATACAAGCTGTGCATCTTTGACCGAGACAGTCTGCCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp GTCAGATTTTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCCCTTTCTTGGGAAGCTaGGAGGGCGCAGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: VRFSHRFMTYRGLVEIVAPFLGS*EGAAKA
Trigger: TGCTTTTGCTGCGCCCTCTCAGCTTCCCAAGAAAGG...GGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAAAATCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp GCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: ASTRTSSFPCCSLGMHTPLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...GGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCACCATTTTGTATCCATTaGGTTTCTGACTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNAPFCIH*VSDSWG
Trigger: TCCCCAAGAGTCAGAAACTCAATGGATACAAAATGG...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATATTGGATAAGTCCGTaGAATGATGAAGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNAYWISP*NDEEQG
Trigger: CCCTTGCTCTTCATCATTTCACGGACTTATCCAATA...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELSVAGH*FLPRLW
Trigger: CCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: YSETENAMYPWVGMFGSLSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATTCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPALLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGGAGCTGGCACTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSGAGTF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGTGCCAGCTCC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGCATCATCTGGTTATGAATCTCTaGCCGGCTCTTGTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: TSSFPCCSLGMHTPCKHHLVMNL*PALVPK
Trigger: CTTAGGAACAAGAGCCGGGCAGAGATTCATAACCAG...ATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTGGCCCAAGAAGAGTGTaGTCTTCTGAGGCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAGPRRV*SSEAFR
Trigger: TCTAAAGGCCTCAGAAGAGCACACTCTTCTTGGGCC...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGACCAGCTCCTTTCCATaGTGCTCCCTGGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: YSETENAMYPWVGMFGSLTSSFP*CSLGMH
Trigger: ATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGTGTGTATCTTGGAGCTaGCACTTTCTGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKCVSWS*HFLLHL
Trigger: AAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACA...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATTGCCCTGTGGATACTTaGATTTTTCCCCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADCPVDT*IFPLSI
Trigger: AATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCA...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAAAGGAATGCAGCATTaGCAAGAGAATGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADKGMQH*QENGPL
Trigger: CAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTTTCCATGCTGCTCCCTaGGAATGCATACACCCTGTA +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAFHAAP*ECIHPV
Trigger: TACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAA...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCGTCGGGCTAGGTGCTaGAGCTCTCTTGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSRRARC*SSLVLN
Trigger: ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACG...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
3UTR CAA 72 bp ACCTGCAGCTGCTTCCAGAACCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCATTTAATGACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: TCSCFQNLPCGY*DFSPFHLMTVS
Trigger: GCTCACGGTCATTAAATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGCTGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
3UTR CAA 72 bp GTCAGATTTTCCCACAGGTTCATGACATACAGAGGGTaGGTAGAGATAGTAGCCACCACCCACCACACACAG +
Preference number: 4 (lower is better)
Translates to: VRFSHRFMTYRG*VEIVATTHHTQ
Trigger: CTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAAAATCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGGCAGTCTTCCCCAGTaGGCCTCTTACTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHGSLPQ*ASYFPP
Trigger: CGGCGGAAAGTAAGAGGCTCACTGGGGAAGACTGCC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000072516.7
ENST00000439062.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCARPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAAAGACACAGACTCTTTaGGCTGAAGAATGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVKTQTL*AEECLG
Trigger: ACCCAGGCATTCTTCAGCTCAAAGAGTCTGTGTCTT...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTGAACGTGATCCAGACTaGTGTCAGACTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCAERDPD*CQTGKS
Trigger: GCTCTTCCCAGTCTGACATCAGTCTGGATCACGTTC...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCTGCTCTTGAACAACTaGCCTCAGTTGATCCACAAG +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPALLLNN*PQLIHK
Trigger: CTTGTGGATCAACTGAGGTCAGTTGTTCAAGAGCAG...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCAAAGAAAGGATCTTCTaGGAACATTTTCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLKERIF*EHFQEG
Trigger: CCCCTCTTGAAAATGTTCTCAGAAGATCCTTTCTTT...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCTTACAAGTTTCAGGGTaGGTTCACATTTACTCTAGG +
Preference number: 4 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLLQVSG*VHIYSR
Trigger: CCTAGAGTAAATGTGAACTCACCCTGAAACTTGTAA...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGAATCTTCTCCCTCCTTaGGCTTCGGAGCCGCTTACA +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVNLLPP*ASEPLT
Trigger: TGTAAGCGGCTCCGAAGCTCAAGGAGGGAGAAGATT...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVSSRDG*SVAGHC
Trigger: GCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp GCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: ASTRTSSFPCCSLGMHTPNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...GGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNASIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGAGCTGGCACTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFGAGTF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGTGCCAGCTCC...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTACTGGTTATGAATCTCTaGCCGGCTCTTGTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVLVMNL*PALVPK
Trigger: CTTAGGAACAAGAGCCGGGCAGAGATTCATAACCAG...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGCTGCTCCCTGGGAATaGATACACCCTGTAAGCATC +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFAAPWE*IHPVSI
Trigger: GATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGC...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGCTCCTTTCCATGCTaGTCCCTGGGAATGCATACA +
Preference number: 4 (lower is better)
Translates to: YSETENAMYPWVGMFGSLSSFPC*SLGMHT
Trigger: TGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCT...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGACCAGCTCCTTTCCATaGTGCTCCCTGGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVTSSFP*CSLGMH
Trigger: ATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCGGACCCCGGAGACCTaGATCCCGGCAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVRTPET*IPAVFP
Trigger: GGGGAAGACTGCCGGGATCCAGGTCTCCGGGGTCCG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072516.7
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNASSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCAGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHAALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGTGGCAATGGAGTTCTaGCACATGACACCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHAVAMEF*HMTPSL
Trigger: TAAACTGGGTGTCATGTGCCAGAACTCCATTGCCAC...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAAAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: FVLQLPPEPAPFHAAPWEKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...TTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSFLGQP*APGGLG
Trigger: CCCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATTCTGCTTCTCTGAATaGAATCAAAAACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNAFCFSE*NQKLLP
Trigger: TGGAAGCAGTTTTTGATTTCATTCAGAGAAGCAGAA...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTACTCAACCACAATaGGCTTGGTGGCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFGTQPQ*AWWQWS
Trigger: ACTCCATTGCCACCAAGCTCATTGTGGTTGAGTACC...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGGGTACTCAACCACAATaGGCTTGGTGGCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKGTQPQ*AWWQWS
Trigger: ACTCCATTGCCACCAAGCTCATTGTGGTTGAGTACC...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVSVAGH*FLPRLW
Trigger: CCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR GCA 90 bp TTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTGCCTTTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: LLRGPMIYLTWKSNAMCLSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...AAGGCACATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: PMAGYCLAVTMEALCTADNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 4 (lower is better)
Translates to: ASTRTSSFPCCSLGMHTPFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...GGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTGGGGTTCCAATCTGGTaGCATTTTGTATCCATTGAG +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAGVPIW*HFVSIE
Trigger: CTCAATGGATACAAAATGGCACCAGATTGGAACCCC...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTTTCAAGAGTTTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFFKSFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAAACTCTTGAA...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGTTCCTTCCGCGCCTCTaGCCAAAGCGGACCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVFLPRL*PKRTPE
Trigger: CTCCGGGGTCCGCTTTGGCCAGAGGCGCGGAAGGAA...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATCTTTATTTTAGCTAGTAGGAAATTGAGGCTCAGAGAGACCATGTTCAAACAGCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: IFILASRKLRLRETMFKQQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...CTGTTTGAACATGGTCTCTCTGAGCCTCAATTTCCTACTAGCTAAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATCAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTACAAAAGCAGCCGGGATaGGTGCAGTGTCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVQKQPG*VQCRRA
Trigger: TGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTG...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCAEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TENAMYPWVGMFGSLRKNSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...ATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTTGCCCTGTGGATACTTaGATTTTTCCCCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLCPVDT*IFPLSI
Trigger: AATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCA...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTCAGGGGGTTCCAATCTaGTGCCATTTTGTATCCATT +
Preference number: 4 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHAQGVPI*CHFVSI
Trigger: AATGGATACAAAATGGCACCAGATTGGAACCCCCTG...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATTTGATTCATTACTATaGGTTAGATGCCGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSFDSLL*VRCRRA
Trigger: AGCCCGACGGCATCTAACCCATAGTAATGAATCAAA...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGGCAGTCTTCCCCAGTaGGCCTCTTACTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVGSLPQ*ASYFPP
Trigger: CGGCGGAAAGTAAGAGGCTCACTGGGGAAGACTGCC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000072516.7
ENST00000439062.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR TCA 90 bp CAAGGATGGATTATTCTTTACAAGAAGGGATTTAATAGAGGACAAGGCCTTTGGAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: QGWIILYKKGFNRGQGLWSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...CCAAAGGCCTTGTCCTCTATTAAATCCCTTCTTGTAAAGAATAATCCATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCESCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCACTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMERPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACATGGTAAACAACAATaGGAATCACCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPHGKQQ*ESPLAG
Trigger: TCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATG...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGGCATCAGAGACTGGTaGCAGAACGTTGATGATATC +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCGIRDW*QNVDDI
Trigger: GATATCATCAACGTTCTGTCACCAGTCTCTGATGCC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCCCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 4 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTAGAAGTGTCATCCTTTaGGATATTAAAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSRSVIL*DIKGRG
Trigger: GCCCCTCCCTTTAATATCTCAAAGGATGACACTTCT...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422485.5
CDS-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACAGAAGTGTCATCCTTTaGGATATTAAAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNRSVIL*DIKGRG
Trigger: GCCCCTCCCTTTAATATCTCAAAGGATGACACTTCT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGCAACTTTCACATACTaGCCTTCTAGGGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFATFTY*PSRAQE
Trigger: TTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGC...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGCCCATTCACTGTTACTaGCCGGGAGCCACTGACACT +
Preference number: 4 (lower is better)
Translates to: STGYLVRVACRFLITSFRPIHCY*PGATDT
Trigger: AGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGG...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATC +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPSRSRS*LVQYQI
Trigger: GATCTGGTATTGGACTAGGCAGGACCGGGACCTTGA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTTCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTATCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTCTGTGCACAGCAGATaGCACTGCAACCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNSVHSR*HCNLDK
Trigger: TTTATCTAGGTTGCAGTGGCATCTGCTGTGCACAGA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGACGATCTCGGCTCACTaGAACCTCCACCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: STGYLVRVACRFLITSFRTISAH*NLHLLG
Trigger: ACCTAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGT...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCCATCTATTACCTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFHLLPF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATG...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCATCTATTACCTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVHLLPF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATG...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCATCTATTACCTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNHLLPF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATG...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTGTGTATCTTGGAGCTaGCACTTTCTGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSCVSWS*HFLLHL
Trigger: AAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCAAAGGAATGCAGCATTaGCAAGAGAATGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSKGMQH*QENGPL
Trigger: CAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTT...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTAACGCCATGTATCCCTaGGTGGGTATGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFNAMYP*VGMFGS
Trigger: AGAACCAAACATACCCACCCAGGGATACATGGCGTT...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTTTGATTCATTACTATaGGTTAGATGCCGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFFDSLL*VRCRRA
Trigger: AGCCCGACGGCATCTAACCCATAGTAATGAATCAAA...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACCTTTCTTGGGAAGCTaGGAGGGCGCAGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEPFLGS*EGAAKA
Trigger: TGCTTTTGCTGCGCCCTCTCAGCTTCCCAAGAAAGG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp GTCAGATTTTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: VRFSHRFMTYRGLVEIVARVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...GGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAAAATCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCATCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTTCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 4 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAACCATGGAAGCTCTGTaGACAGCAGATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLTMEAL*TADATA
Trigger: TGCAGTGGCATCTGCTGTGCACAGAGCTTCCATGGT...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCATCTATTACCTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSHLLPF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATG...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCAATACCTTAATTAGTTaGATACAATTGGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLNTLIS*IQLDGC
Trigger: GCAGCCATCCAATTGTATGCAACTAATTAAGGTATT...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTTTAGCAATTGTGGCTaGTGGTATATTATAAACCTG +
Preference number: 4 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLFSNCG*WYIINL
Trigger: CAGGTTTATAATATACCAGCAGCCACAATTGCTAAA...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATAGTGTCATCCTTTCTTaGGAAGCTGAGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHSVILS*EAERAQ
Trigger: CTGCGCCCTCTCAGCTTCCCAAGAAAGGATGACACT...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072516.7
ENST00000342550.6
CDS-3UTR CCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFSSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGTGTGTATCTTGGAGCTaGCACTTTCTGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVCVSWS*HFLLHL
Trigger: AAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACA...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTGCCCTGTGGATACTTaGATTTTTCCCCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSCPVDT*IFPLSI
Trigger: AATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMETANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPTANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTTAATGCCCGATGGCTaGCTACTGCTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNELMPDG*LLLSSD
Trigger: GTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTAAAGGAATGCAGCATTaGCAAGAGAATGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSKGMQH*QENGPL
Trigger: CAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTT...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACTGGGTGGGTATGTTTaGTTCTTTGAGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPLGGYV*FFEEKC
Trigger: ACATTTTTCCTCAAAGAACCAAACATACCCACCCAG...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTTTTGATTCATTACTATaGGTTAGATGCCGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSFDSLL*VRCRRA
Trigger: AGCCCGACGGCATCTAACCCATAGTAATGAATCAAA...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCAGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAGTTGCCAGTGTCATTaGGGAGAGTGGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKSCQCH*GEWAGT
Trigger: GGTTCCGGCCCACTCTCCTCAATGACACTGGCAACT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: YSETENAMYPWVGMFGSLLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCERPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGCATGGTAAACAACAATaGGAATCACCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKHGKQQ*ESPLAG
Trigger: TCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATG...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGTCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCACTGGCATGGCCACCTaGAGCTGCTTCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSTGMAT*SCFQNL
Trigger: CAGGTTCTGGAAGCAGCTGCAGGTGGCCATGCCAGT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAACCATGGAAGCTCTGTaGACAGCAGATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCETMEAL*TADATA
Trigger: TGCAGTGGCATCTGCTGTGCACAGAGCTTCCATGGT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAACCATGGAAGCTCTGTaGACAGCAGATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELTMEAL*TADATA
Trigger: TGCAGTGGCATCTGCTGTGCACAGAGCTTCCATGGT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACAAAGTGCAAAAGGAATaGAGCATTGGCAAGAGAATG +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNKVQKE*SIGKRM
Trigger: CATTCTCTTGCCAATGCTGCATTCCTTTTGCACTTT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTAATACCTTAATTAGTTaGATACAATTGGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YGLDAVGLGAGALLFSISNTLIS*IQLDGC
Trigger: GCAGCCATCCAATTGTATGCAACTAATTAAGGTATT...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATTTAGCAATTGTGGCTaGTGGTATATTATAAACCTG +
Preference number: 4 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSFSNCG*WYIINL
Trigger: CAGGTTTATAATATACCAGCAGCCACAATTGCTAAA...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSSSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGTGCCCAACAGCATTTaGGATAAATATGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNVPNSI*DKYGIQ
Trigger: TTGGATTCCATATTTATCCCAAATGCTGTTGGGCAC...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTAGCAATTGTGGCTGCTaGTATATTATAAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVSNCGC*YIINLL
Trigger: AAGCAGGTTTATAATATACCAGCAGCCACAATTGCT...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCAGCAATTGTGGCTGCTaGTATATTATAAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFSNCGC*YIINLL
Trigger: AAGCAGGTTTATAATATACCAGCAGCCACAATTGCT...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
3UTR CAA 72 bp CTCTTCAGCTCTTTCACCTTCGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACGTTGATGTTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: LFSSFTFVSFTA*YCTKMTLMLPR
Trigger: TCGGGGCAACATCAACGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAACGAAGGTGAAAGAGCTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCCTTTCTTGGGAAGCTaGGAGGGCGCAGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVPFLGS*EGAAKA
Trigger: TGCTTTTGCTGCGCCCTCTCAGCTTCCCAAGAAAGG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTCAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTACAAAGAGTGGGCACTTaGTGCGAGCTGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVQRVGT*CELAHL
Trigger: AAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTG...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCAVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: TLVYSETENAMYPWVGMFGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR TCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACACATGATCATTAGGTaGATGGATCACAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELHMIIR*MDHRGH
Trigger: GTGCCCCCTGTGATCCATTCACCTAATGATCATGTG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGAGGCGTCTGCTTTTCTaGATGAAGCTCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMERRLLF*MKLKVS
Trigger: TGAGACTTTGAGCTTCATTCAGAAAAGCAGACGCCT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNSDFSY*LIWSKY
Trigger: ATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATAGAATGGTCCTTTGGTaGCTAGACTATTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHRMVLW*LDYSLF
Trigger: AAACAGGGAATAGTCTAGTCACCAAAGGACCATTCT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGAGAAGTGTCATCCTTTaGGATATTAAAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNERSVIL*DIKGRG
Trigger: GCCCCTCCCTTTAATATCTCAAAGGATGACACTTCT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTTCAGTTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTATTGGATAAGTCCGTaGAATGATGAAGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LQLLRGPMIYLTWKSNAMYWISP*NDEEQG
Trigger: CCCTTGCTCTTCATCATTTCACGGACTTATCCAATA...CATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMESNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGGAGCTGGCACTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVGAGTF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGTGCCAGCTCC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 4 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR GCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGAATACGAGAGGCCCTaGTCATCACTGCTAGACCGC +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSEYERP*SSLLDR
Trigger: GCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 4 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCATGAGTCAGAAAAATaGCCTAAAAGAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSHESEK*PKRVFL
Trigger: CAGAAAGACTCTTTTAGGGCATTTTTCTGACTCATG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCAAAGTGCAAAAGGAATaGAGCATTGGCAAGAGAATG +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCKVQKE*SIGKRM
Trigger: CATTCTCTTGCCAATGCTGCATTCCTTTTGCACTTT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTTTTAGCAATTGTGGCTaGTGGTATATTATAAACCTG +
Preference number: 4 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVFSNCG*WYIINL
Trigger: CAGGTTTATAATATACCAGCAGCCACAATTGCTAAA...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp GTCAGATTTTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VRFSHRFMTYRGLVEIVASSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...GGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAAAATCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELEVFKE*ALDASW
Trigger: CCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSEAEVN*LLKVPV
Trigger: GACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTCACCTTGGCTGCTTTaGCAACTTCGCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSSPWLL*QLRLWH
Trigger: GTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAACTGCGAATGAAGACTaGGGGGACTCTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCETANED*GDSFFL
Trigger: CAGGAAGAAAGAGTCCCCCCAGTCTTCATTCGCAGT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGGACAAGAGTTCCAGTaGTTTTTAATATTGTACCCA +
Preference number: 4 (lower is better)
Translates to: SRPLRLTSALYNGATKTSGQEFQ*FLILYP
Trigger: TGGGTACAATATTAAAAACCACTGGAACTCTTGTCC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTTAATGCCCGATGGCTaGCTACTGCTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSLMPDG*LLLSSD
Trigger: GTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTATTAATGCCCGATGGCTaGCTACTGCTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELLMPDG*LLLSSD
Trigger: GTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAA...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTCTCCATTTTCTGAAATaGAATACTCTCCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHALHFLK*NTLQIR
Trigger: TCTTATCTGGAGAGTATTCCATTTCAGAAAATGGAG...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp AGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGGTGAGTTCACATTTACTCAGAGGACAAGGCCTTTaGGTTGTGCTAAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: RVACRFLITSFRVSSHLLRGQGL*VVLSHF
Trigger: AAAATGACTTAGCACAACCCAAAGGCCTTGTCCTCT...GAGTAAATGTGAACTCACCCTGAAACTTGTAATCAGAAAACGACAGGCCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAACATCACATTCAATTTaGCATGTCAGGTCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVTSHSI*HVRSRN
Trigger: ATTTCTTGACCTGACATGCCAAATTGAATGTGATGT...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATCGTCGGGCTAGGTGCTaGAGCTCTCTTGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDRRARC*SSLVLN
Trigger: ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACG...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
3UTR CAA 72 bp GCAAAAGGAATGCAGCATTGGCAAGAGAATGGTCCTTaGGTGACTAGACTATTCCCTGTTTGCCTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: AKGMQHWQENGP*VTRLFPVCLKF
Trigger: AAACTTTAGGCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKQSKAS*MGCAVV
Trigger: AACTACAGCACAGCCCATTCAGCTGGCCTTACTCTG...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAGACCGTACAGGGAATaGGTAGCTCCTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVRPYRE*VAPLLV
Trigger: AACCAGGAGAGGAGCTACTCATTCCCTGTACGGTCT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCATGGTAAACAACAATaGGAATCACCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEHGKQQ*ESPLAG
Trigger: TCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCATGGTAAACAACAATaGGAATCACCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPHGKQQ*ESPLAG
Trigger: TCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTTCTGGTCTAGTAAGTaGAGGGTTAATAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEFWSSK*RVNRGS
Trigger: ACTCCCTCTATTAACCCTTCACTTACTAGACCAGAA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GTCAGATTTTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCATCCTTGTAGGCACTTaGATTTATTATCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VRFSHRFMTYRGLVEIVAILVGT*IYYPFS
Trigger: TGAGAAGGGATAATAAATTCAAGTGCCTACAAGGAT...GGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAAAATCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp GCTTCATTGAAATGTATGGTACTGAACATCACATTCAATTTGGCATGTCAGGTCTTGATCCACAAGTCTTaGCTTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASLKCMVLNITFNLACQVLIHKS*LPKVLG
Trigger: TCCCAGCACTTTGGGAAGTCAAGACTTGTGGATCAA...GACCTGACATGCCAAATTGAATGTGATGTTCAGTACCATACATTTCAATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp CTTCAGTTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGCCAACTGAAGGTTCTTaGATATACATCAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LQLLRGPMIYLTWKSNAMPTEGS*IYIKDG
Trigger: TCCATCCTTGATGTATATTCAAGAACCTTCAGTTGG...CATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAACTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDLLHLG*FGNFAF
Trigger: AAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAG...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGGAGCTGGCACTTTCTaGTTCACCTTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVGAGTF*FTLAAL
Trigger: CAAAGCAGCCAAGGTGAAGCAGAAAGTGCCAGCTCC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTGCCTTTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 4 (lower is better)
Translates to: LLRGPMIYLTWKSNAMCLCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...AAGGCACATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHCLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGCTGCTTCCAGAACCTaGCCTGTGGATACTTGGATT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVAASRT*PVDTWI
Trigger: AATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGACCATGGAAGCTCTGTaGACAGCAGATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVTMEAL*TADATA
Trigger: TGCAGTGGCATCTGCTGTGCACAGAGCTTCCATGGT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGCCGATGGCTGGCTACTaGTTAGCAGTGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKPMAGY*LAVTME
Trigger: TTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTAATACCTTAATTAGTTaGATACAATTGGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSNTLIS*IQLDGC
Trigger: GCAGCCATCCAATTGTATGCAACTAATTAAGGTATT...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAGTGTCATCCTTTCTTaGGAAGCTGAGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVSVILS*EAERAQ
Trigger: CTGCGCCCTCTCAGCTTCCCAAGAAAGGATGACACT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072516.7
ENST00000342550.6
CDS-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCELGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHSSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATTGTGTATCTTGGAGCTaGCACTTTCTGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHCVSWS*HFLLHL
Trigger: AAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACA...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCCTGGAGCACGTAGTTaGGGCTTAGAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVPGARS*GLEQPG
Trigger: TCCTGGTTGTTCTAAGCCCCAACTACGTGCTCCAGG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTGCCCTGTGGATACTTaGATTTTTCCCCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNECPVDT*IFPLSI
Trigger: AATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTACCAGAACCTGCCCTGTaGATACTTGGATTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVPEPAL*ILGFFP
Trigger: GGGGAAAAATCCAAGTATCCACAGGGCAGGTTCTGG...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGGGACTCTTTCTTCCTaGAGCACCCCTTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEGTLSS*STPCSF
Trigger: AAAAGAACAAGGGGTGCTCCAGGAAGAAAGAGTCCC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMELYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATTAATGCCCGATGGCTaGCTACTGCTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVLMPDG*LLLSSD
Trigger: GTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: STGYLVRVACRFLITSFRGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMELHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CAAGGATGGATTATTCTTTACAAGAAGGGATTTAATAGAGGACAAGGCCTTTGGAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: QGWIILYKKGFNRGQGLWRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...CCAAAGGCCTTGTCCTCTATTAAATCCCTTCTTGTAAAGAATAATCCATCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCCAGTCAGAGTCCTGGTaGGATGAAACGTACGTCCAT +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSQSESW*DETYVH
Trigger: ATGGACGTACGTTTCATCTCACCAGGACTCTGACTG...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATTACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGATAAATTACCTGAGATaGGGACAAGGGTGGTATAGA +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEINYLR*GQGWYR
Trigger: TCTATACCACCCTTGTCCTCATCTCAGGTAATTTAT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATCCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAGAGTGGTAGAGCTATaGTCAAACTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCERVVEL*SNSSFL
Trigger: CAGAAAGCTGGAGTTTGATCATAGCTCTACCACTCT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412504.6
CDS-3UTR GCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNESIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTATCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGCTGCTTCCAGAACCTaGCCTGTGGATACTTGGATT +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVAASRT*PVDTWI
Trigger: AATCCAAGTATCCACAGGGCAGGTTCTGGAAGCAGC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATCATGAGTCAGAAAAATaGCCTAAAAGAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHHESEK*PKRVFL
Trigger: CAGAAAGACTCTTTTAGGGCATTTTTCTGACTCATG...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTATCTGTGCACAGCAGATaGCACTGCAACCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELSVHSR*HCNLDK
Trigger: TTTATCTAGGTTGCAGTGGCATCTGCTGTGCACAGA...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAAAGTGCAAAAGGAATaGAGCATTGGCAAGAGAATG +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPKVQKE*SIGKRM
Trigger: CATTCTCTTGCCAATGCTGCATTCCTTTTGCACTTT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNESSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMESSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTGTGTATCTTGGAGCTaGCACTTTCTGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSCVSWS*HFLLHL
Trigger: AAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTTAATGCCCGATGGCTaGCTACTGCTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSLMPDG*LLLSSD
Trigger: GTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAA...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATAAAGGAATGCAGCATTaGCAAGAGAATGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHKGMQH*QENGPL
Trigger: CAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTT...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGTGCCCAACAGCATTTaGGATAAATATGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPVPNSI*DKYGIQ
Trigger: TTGGATTCCATATTTATCCCAAATGCTGTTGGGCAC...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTGTGGCAATGGAGTTCTaGCACATGACACCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVVAMEF*HMTPSL
Trigger: TAAACTGGGTGTCATGTGCCAGAACTCCATTGCCAC...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp ATCTTTATTTTAGCTAGTAGGAAATTGAGGCTCAGAGAGACCATGTTCAAACAGAACGCCATGTATCCCTaGGTGGGTATGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IFILASRKLRLRETMFKQNAMYP*VGMFGS
Trigger: AGAACCAAACATACCCACCCAGGGATACATGGCGTT...CTGTTTGAACATGGTCTCTCTGAGCCTCAATTTCCTACTAGCTAAAATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp ATCTTTATTTTAGCTAGTAGGAAATTGAGGCTCAGAGAGACCATGTTCAAACAGTCTCAGAAGCCTGAATaGGACGAAGGCACCTATTTC +
Preference number: 4 (lower is better)
Translates to: IFILASRKLRLRETMFKQSQKPE*DEGTYF
Trigger: GAAATAGGTGCCTTCGTCCCATTCAGGCTTCTGAGA...CTGTTTGAACATGGTCTCTCTGAGCCTCAATTTCCTACTAGCTAAAATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTGCATGTAAAATAAGCTaGTATCTGGCCATATTTTCT +
Preference number: 4 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCAACKIS*YLAIFS
Trigger: AGAAAATATGGCCAGATACCAGCTTATTTTACATGC...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp TTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTGCCTTACAATATGGCAACATTaGGGCTCAATTAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: LLRGPMIYLTWKSNAMCLTIWQH*GSISDK
Trigger: TTTGTCACTAATTGAGCCCCAATGTTGCCATATTGT...AAGGCACATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCATGGTAAACAACAATaGGAATCACCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSHGKQQ*ESPLAG
Trigger: TCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAAGGCGTCTGCTTTTCTaGATGAAGCTCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVRRLLF*MKLKVS
Trigger: TGAGACTTTGAGCTTCATTCAGAAAAGCAGACGCCT...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTATACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPSDFSY*LIWSKY
Trigger: ATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAGAATGGTCCTTTGGTaGCTAGACTATTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCERMVLW*LDYSLF
Trigger: AAACAGGGAATAGTCTAGTCACCAAAGGACCATTCT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTTATCCATTGAGTTTCTaGCTCTTGGGGAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVYPLSF*LLGNRL
Trigger: AAGCCTGTTCCCCAAGAGTCAGAAACTCAATGGATA...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNENFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTATCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGCATGAGTCAGAAAAATaGCCTAAAAGAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEHESEK*PKRVFL
Trigger: CAGAAAGACTCTTTTAGGGCATTTTTCTGACTCATG...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATCTGTGCACAGCAGATaGCACTGCAACCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVSVHSR*HCNLDK
Trigger: TTTATCTAGGTTGCAGTGGCATCTGCTGTGCACAGA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVLGFAS*CLVPSH
Trigger: ATGACTGGGGACTAGACACCATGAGGCAAATCCAAG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTG +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSALDAS*LIFKHL
Trigger: CAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTTGTATCATCCTAAGTaGATGTCAGTCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSLYHPK*MSVLLW
Trigger: CCACAGCAAGACTGACATCCACTTAGGATGATACAA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAAAGGAATGCAGCATTaGCAAGAGAATGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEKGMQH*QENGPL
Trigger: CAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGTGCCCAACAGCATTTaGGATAAATATGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHVPNSI*DKYGIQ
Trigger: TTGGATTCCATATTTATCCCAAATGCTGTTGGGCAC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTTGAATGTTCTCTATTaGCCATCTTCTGGAACATTA +
Preference number: 4 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHLNVLY*PSSGTL
Trigger: TAATGTTCCAGAAGATGGCCAATAGAGAACATTCAA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGCTGGGTGGGTATGTTTaGTTCTTTGAGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: STGYLVRVACRFLITSFRLGGYV*FFEEKC
Trigger: ACATTTTTCCTCAAAGAACCAAACATACCCACCCAG...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGTTGTTCCCCCATCTTTaGAGTAGGAATCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: STGYLVRVACRFLITSFRLFPHL*SRNLLV
Trigger: AACTAGAAGATTCCTACTCCAAAGATGGGGGAACAA...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVRVLVR*NVRPFS
Trigger: AGAAAATGGACGTACGTTTCATCTCACCAGGACTCT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTGTCTGCTTTTCTGAATaGAGCTCAAAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSVCFSE*SSKSHL
Trigger: CAGATGAGACTTTGAGCTTCATTCAGAAAAGCAGAC...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCAGGCGTCTGCTTTTCTaGATGAAGCTCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSRRLLF*MKLKVS
Trigger: TGAGACTTTGAGCTTCATTCAGAAAAGCAGACGCCT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATACATTTTTCAAAGATaGATACGAGAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVYIFQR*IREALL
Trigger: GAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTACCTGCAAACTCTAAATaGGCAATGCGATATAAGCAG +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVPANSK*AMRYKQ
Trigger: CTGCTTATATCGCATTGCTCATTTAGAGTTTGCAGG...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 4 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR TCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHSDFSY*LIWSKY
Trigger: ATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACT...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTTCTGGTCTAGTAAGTaGAGGGTTAATAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSFWSSK*RVNRGS
Trigger: ACTCCCTCTATTAACCCTTCACTTACTAGACCAGAA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATTCTGGTCTAGTAAGTaGAGGGTTAATAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVFWSSK*RVNRGS
Trigger: ACTCCCTCTATTAACCCTTCACTTACTAGACCAGAA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAAGAATGGTCCTTTGGTaGCTAGACTATTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVRMVLW*LDYSLF
Trigger: AAACAGGGAATAGTCTAGTCACCAAAGGACCATTCT...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAGAATGGTCCTTTGGTaGCTAGACTATTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSRMVLW*LDYSLF
Trigger: AAACAGGGAATAGTCTAGTCACCAAAGGACCATTCT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTCCATTTTGTATCCATTaGGTTTCTGACTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVPFCIH*VSDSWG
Trigger: TCCCCAAGAGTCAGAAACTCAATGGATACAAAATGG...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR GCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKSNTWI*LMVSSP
Trigger: GGGACTAGACACCATGAGGCAAATCCAAGTGTTTGA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR GCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATTCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 4 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATGTCTCGGTCAAAGATaGACAGCTTGTATCCAAATT +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCECLGQR*TACIQI
Trigger: AATTTGGATACAAGCTGTGCATCTTTGACCGAGACA...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATCATGAGTCAGAAAAATaGCCTAAAAGAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHHESEK*PKRVFL
Trigger: CAGAAAGACTCTTTTAGGGCATTTTTCTGACTCATG...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTGTGTATCTTGGAGCTaGCACTTTCTGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKCVSWS*HFLLHL
Trigger: AAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCGTGCCCAACAGCATTTaGGATAAATATGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSVPNSI*DKYGIQ
Trigger: TTGGATTCCATATTTATCCCAAATGCTGTTGGGCAC...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGTGCCCAACAGCATTTaGGATAAATATGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELVPNSI*DKYGIQ
Trigger: TTGGATTCCATATTTATCCCAAATGCTGTTGGGCAC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATTTTGATTCATTACTATaGGTTAGATGCCGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDFDSLL*VRCRRA
Trigger: AGCCCGACGGCATCTAACCCATAGTAATGAATCAAA...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGGGCTGTGCTGTAGTTaGATTTCAAGAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSGLCCS*ISRSVQ
Trigger: TTGAACACTTCTTGAAATTCAACTACAGCACAGCCC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGCATGGTAAACAACAATaGGAATCACCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKHGKQQ*ESPLAG
Trigger: TCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATG...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 4 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAGTGACTTCTCATACTaGCTTATTTGGAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELSDFSY*LIWSKY
Trigger: ATACTTGCTCCAAATAAGTCAGTATGAGAAGTCACT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTTCTGGTCTAGTAAGTaGAGGGTTAATAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSFWSSK*RVNRGS
Trigger: ACTCCCTCTATTAACCCTTCACTTACTAGACCAGAA...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTTCTGGTCTAGTAAGTaGAGGGTTAATAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKFWSSK*RVNRGS
Trigger: ACTCCCTCTATTAACCCTTCACTTACTAGACCAGAA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAGAATGGTCCTTTGGTaGCTAGACTATTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKRMVLW*LDYSLF
Trigger: AAACAGGGAATAGTCTAGTCACCAAAGGACCATTCT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTCTATATACAGTTTATaGACTGGGAGTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSSIYSL*TGSFMG
Trigger: CCCCATGAAACTCCCAGTGCATAAACTGTATATAGA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTCCACCAAACCTCATTaGGAGAATCCATCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKSTKPH*ENPSEN
Trigger: GTTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAGTGGATGTCAGTCTTaGTGTGGTTATGTATTATAC +
Preference number: 4 (lower is better)
Translates to: KLREGKNYDNYHSVSCELSGCQS*CGYVLY
Trigger: GTATAATACATAACCACAGCAAGACTGACATCCACT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCATGAGTCAGAAAAATaGCCTAAAAGAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSHESEK*PKRVFL
Trigger: CAGAAAGACTCTTTTAGGGCATTTTTCTGACTCATG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDSSSNT*ICLMVS
Trigger: AGACACCATGAGGCAAATCCAAGTGTTTGAAGATGA...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCGGACAAGAGTTCCAGTaGTTTTTAATATTGTACCCA +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSGQEFQ*FLILYP
Trigger: TGGGTACAATATTAAAAACCACTGGAACTCTTGTCC...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAAAGGAATGCAGCATTaGCAAGAGAATGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVKGMQH*QENGPL
Trigger: CAAAGGACCATTCTCTTGCCAATGCTGCATTCCTTT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCGTTTCATGGGGGAATTaGAACAGCTGTCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSVSWGN*NSCLFE
Trigger: TTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAAC...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGGGACAAGTGATCCTCTaGATGCCATATTCTATATAC +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKGQVIL*MPYSIY
Trigger: GTATATAGAATATGGCATTCAGAGGATCACTTGTCC...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCTACATTTGGACAAGTaGTCCTCTGAATGCCATATT +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVLHLDK*SSECHI
Trigger: AATATGGCATTCAGAGGATCACTTGTCCAAATGTAG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 4 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 4 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGAAAGTGCAAAAGGAATaGAGCATTGGCAAGAGAATG +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVKVQKE*SIGKRM
Trigger: CATTCTCTTGCCAATGCTGCATTCCTTTTGCACTTT...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp GCTTCATTGAAATGTATGGTACTGAACATCACATTCAATTTGGCATGTCAGGTCAGAAATAACTATCTGTaGCTATGTCCCTATTCACAT +
Preference number: 4 (lower is better)
Translates to: ASLKCMVLNITFNLACQVRNNYL*LCPYSH
Trigger: ATGTGAATAGGGACATAGGCACAGATAGTTATTTCT...GACCTGACATGCCAAATTGAATGTGATGTTCAGTACCATACATTTCAATGAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGATACAGTTTATGCACTaGGAGTTTCATGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKIQFMH*EFHGGI
Trigger: AATTCCCCCATGAAACTCCCAGTGCATAAACTGTAT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCATGTCAGTCTTGCTGTaGTTATGTATTATACAGCCG +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSMSVLL*LCIIQP
Trigger: CGGCTGTATAATACATAACCACAGCAAGACTGACAT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp CCCATTATTAATAGATTTGGAGAGAAACTGCTATCTGTCTTCCAACTGAAGGTTCACATCAGTTCTAGATaGAGAGCATGTAAAATAAGC +
Preference number: 4 (lower is better)
Translates to: PIINRFGEKLLSVFQLKVHISSR*RACKIS
Trigger: GCTTATTTTACATGCTCTCCATCTAGAACTGATGTG...AACCTTCAGTTGGAAGACAGATAGCAGTTTCTCTCCAAATCTATTAATAATGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CCA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATAGCAATTGTGGCTGCTaGTATATTATAAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: SISPFVLIHHNVNLELRDSNCGC*YIINLL
Trigger: AAGCAGGTTTATAATATACCAGCAGCCACAATTGCT...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR TCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKKQLSF*TTSKGN
Trigger: ATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR TCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGCACTAGTGAATAGGTaGCAGGAAATACAGTTAATT +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVALVNR*QEIQLI
Trigger: AATTAACTGTATTTCCTGTCACCTATTCACTAGTGC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCAACTTCCAAGGGAAATaGAACTTTGCTGCAATATGT +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSNFQGK*NFAAIC
Trigger: ACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTTTCTTCCGCATTCCTTaGATAGGATACATAAATATC +
Preference number: 4 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSFFRIP*IGYINI
Trigger: GATATTTATGTATCCTATGCAAGGAATGCGGAAGAA...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR GCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAAACATCCTTTTCTGTaGTCTTTTCATGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKKHPFL*SFHESE
Trigger: TTCTGACTCATGAAAAGAGCACAGAAAAGGATGTTT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTTGAATGTTCTCTATTaGCCATCTTCTGGAACATTA +
Preference number: 4 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSLNVLY*PSSGTL
Trigger: TAATGTTCCAGAAGATGGCCAATAGAGAACATTCAA...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGTTGAATGTTCTCTATTaGCCATCTTCTGGAACATTA +
Preference number: 4 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVLNVLY*PSSGTL
Trigger: TAATGTTCCAGAAGATGGCCAATAGAGAACATTCAA...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CCA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTTGAATGTTCTCTATTaGCCATCTTCTGGAACATTA +
Preference number: 4 (lower is better)
Translates to: TVNSLRILMPKATLKATKLNVLY*PSSGTL
Trigger: TAATGTTCCAGAAGATGGCCAATAGAGAACATTCAA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS GCA 90 bp GGGCGCAGCAAAAGCAGCCGGGATGGGTGCAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGGCCAAAGCGGACCCCGGAGACCTGG +
Preference number: 5 (lower is better)
Translates to: GRSKSSRDGCSVAGH*FLPRLWPKRTPETW
Trigger: CCAGGTCTCCGGGGTCCGCTTTGGCCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTGCTGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000447382.6
ENST00000461629.1
ENST00000465496.1
CDS GCA 90 bp TTTCTTGGGAAGCTGAGAGGGCGCAGCAAAAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGCTTCCTTCCGCGCCTCTGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FLGKLRGRSKSSRDG*SVAGHCFLPRLWPK
Trigger: CTTTGGCCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTGCTGCGCCCTCTCAGCTTCCCAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000447382.6
ENST00000461629.1
ENST00000465496.1
ENST00000473566.1
CDS-3UTR CAA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCAGACTTCCCTCGGTGCTaGGACATTGTGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPDFPRC*DIVPGA
Trigger: AGCCCCAGGCACAATGTCCAAGCACCGAGGGAAGTC...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCATTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS GCA 90 bp TTCTCGGGGAGGCGGAAGTTAATTGGCTCCTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATCAGAGTAAGGCCAGCTGAATGGGCT +
Preference number: 5 (lower is better)
Translates to: FSGRRKLIGSSRSRS*LVQYQIRVRPAEWA
Trigger: AGCCCATTCAGCTGGCCTTACTCTGATCTGGTATTGGACTAGGCAGGACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTCCCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS-3UTR CAA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCGAGCTCCAGGAGGGCTaGGGTTCCCTGGAGCACGTA +
Preference number: 5 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSELQEG*GSLEHV
Trigger: TACGTGCTCCAGGGAACCCAAGCCCTCCTGGAGCTC...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp AGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: SFHQNQLLSMLLPGNAYTSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...GGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: FVLQLPPEPAPFHAAPWEFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...TTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGCTCGGTGCTTGGACATaGTGCCTGGGGCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVLGAWT*CLGLEG
Trigger: GCCCTCCAGCCCCAGGCACAATGTCCAAGCACCGAG...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGATGACATACAGAGGGTaGGTAGAGATAGTAGCCACC +
Preference number: 5 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGMTYRG*VEIVAT
Trigger: GGTGGCTACTATCTCTACCAACCCTCTGTATGTCAT...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS GCA 90 bp AGTGGGCACTTGATGCGAGCTGGCTCATCTTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCCCAGTCATCGCAGCGTTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SGHLMRAGSSSNTWI*LMVSSPQSSQRSEA
Trigger: TGCCTCAGAACGCTGCGATGACTGGGGACTAGACACCATGAGGCAAATCCAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS-3UTR CAA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATACTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: PMAGYCLAVTMEALCTADTFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTTCAGTTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGCTCGGTGCTTGGACATaGTGCCTGGGGCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LQLLRGPMIYLTWKSNAMLGAWT*CLGLEG
Trigger: GCCCTCCAGCCCCAGGCACAATGTCCAAGCACCGAG...CATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCGTTGATCCACAAGTCTaGACTTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLVDPQV*TSQSAG
Trigger: CCCAGCACTTTGGGAAGTCAAGACTTGTGGATCAAC...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCATTAGCTAGTAGGAAATaGAGGCTCAGAGAGACCATG +
Preference number: 5 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPLASRK*RLRETM
Trigger: CATGGTCTCTCTGAGCCTCAATTTCCTACTAGCTAA...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS GCA 90 bp AGGCTTACAGAGGTGTGTCTCCCACTGGGGCTGGTTATGAATCTCTaGCCGGCTCTTGTTCCTAAGGTGATTCTCTCCTTCACAGTAGGT +
Preference number: 5 (lower is better)
Translates to: RLTEVCLPLGLVMNL*PALVPKVILSFTVG
Trigger: ACCTACTGTGAAGGAGAGAATCACCTTAGGAACAAGAGCCGGGCAGAGATTCATAACCAGCCCCAGTGGGAGACACACCTCTGTAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CCA 90 bp ATCTTTCTCCTTACTAATGCGGTTCTCGGGGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTCCTGCCTAGTCCAATACCAGATCAG +
Preference number: 5 (lower is better)
Translates to: IFLLTNAVLGEAEVN*LLKVPVLPSPIPDQ
Trigger: CTGATCTGGTATTGGACTAGGCAGGACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTCCCCGAGAACCGCATTAGTAAGGAGAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS CCA 90 bp CTTCCAGCTCACAAAAGACACAGACTCTTTGAGCTGAAGAATGCCTaGGTGCGGGTGCTCAAGGGGACGGTACTCAACCACAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: LPAHKRHRLFELKNA*VRVLKGTVLNHNEL
Trigger: AAGCTCATTGTGGTTGAGTACCGTCCCCTTGAGCACCCGCACCCAGGCATTCTTCAGCTCAAAGAGTCTGTGTCTTTTGTGAGCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCATCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422485.5
ENST00000422940.5
CDS-3UTR CAA 90 bp CGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: RPTASTRTSSFPCCSLGMVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...CATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATGAGCTCCAGGAGGGCTaGGGTTCCCTGGAGCACGTA +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHELQEG*GSLEHV
Trigger: TACGTGCTCCAGGGAACCCAAGCCCTCCTGGAGCTC...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGGACTTCCCTCGGTGCTaGGACATTGTGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVDFPRC*DIVPGA
Trigger: AGCCCCAGGCACAATGTCCAAGCACCGAGGGAAGTC...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCCTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: YGLDAVGLGAGALLFSISPFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGG...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS CCA 90 bp TCAAAGAGTGGGCACTTGATGCGAGCTGGCTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCTAGTCCCCAGTCATCGCAGCGTTCT +
Preference number: 5 (lower is better)
Translates to: SKSGHLMRAGSSSNT*ICLMVSSPQSSQRS
Trigger: AGAACGCTGCGATGACTGGGGACTAGACACCATGAGGCAAATCCAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATCTCATCTTCAAACACTaGGATTTGCCTCATGGTGTC +
Preference number: 5 (lower is better)
Translates to: PMAGYCLAVTMEALCTADLIFKH*DLPHGV
Trigger: GACACCATGAGGCAAATCCAAGTGTTTGAAGATGAG...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CCCCACTGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCAGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: PHCPFTVTDREPLTLIGPETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...TGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp TGCCCATTCACTGTTACTGACCGGGAGCCACTGACACTCATTGGGCCACAACTCGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: CPFTVTDREPLTLIGPQLVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...GAGTTGTGGCCCAATGAGTGTCAGTGGCTCCCGGTCAGTAACAGTGAATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: PMAGYCLAVTMEALCTADVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGAGCTCCAGGAGGGCTaGGGTTCCCTGGAGCACGTA +
Preference number: 5 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPELQEG*GSLEHV
Trigger: TACGTGCTCCAGGGAACCCAAGCCCTCCTGGAGCTC...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGACGACTTCTCCTCCTTaGAACGTGATCCAGACTGAT +
Preference number: 5 (lower is better)
Translates to: TRTSSFPCCSLGMHTPCKTTSPP*NVIQTD
Trigger: ATCAGTCTGGATCACGTTCAAAGGAGGAGAAGTCGT...CTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCCCTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALPFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGG...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCCTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVPFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGG...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCCTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNPFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGG...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS TCA 90 bp CCCATAATTCCCACATGTTGTGGGAGGGACCCAGTGGGAGATGATTaGATCATGTGGGGTAGGTCTGTCCCATGCTATTCTCGTGATAGT +
Preference number: 5 (lower is better)
Translates to: PIIPTCCGRDPVGDD*IMWGRSVPCYSRDS
Trigger: ACTATCACGAGAATAGCATGGGACAGACCTACCCCACATGATTCAATCATCTCCCACTGGGTCCCTCCCACAACATGTGGGAATTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465496.1
CDS CCA 90 bp AGGGGACGGTACTCAACCACAATGAGCTTGGTGGCAATGGAGTTCTaGCACATGACACCCAGTTTAAACTCCAGCATGCTGATGCTCTTT +
Preference number: 5 (lower is better)
Translates to: RGRYSTTMSLVAMEF*HMTPSLNSSMLMLF
Trigger: AAAGAGCATCAGCATGCTGGAGTTTAAACTGGGTGTCATGTGCCAGAACTCCATTGCCACCAAGCTCATTGTGGTTGAGTACCGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: YGLDAVGLGAGALLFSISGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp ACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCATACACCCTGTAAGCATCATGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: TSSFPCCSLGMHTPCKHHGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...ATGATGCTTACAGGGTGTATGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 5 (lower is better)
Translates to: ASSYSFHQNQLLSMLLPGLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...CCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCTGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATAAAAGGAATGCAGCATaGGCAAGAGAATGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: PMAGYCLAVTMEALCTADKRNAA*AREWSF
Trigger: AAAGGACCATTCTCTTGCCAATGCTGCATTCCTTTT...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGGAATCTTCTCCCTCCTaGAGCTTCGGAGCCGCTTAC +
Preference number: 5 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKESSPS*SFGAAY
Trigger: GTAAGCGGCTCCGAAGCTCAAGGAGGGAGAAGATTC...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS TCA 90 bp GTCCCGGTCCTGCCTAGTCCAATACCAGATCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTTGAATTTCAAGAAGTGTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: VPVLPSPIPDQSKAS*MGCAVVEFQEVFKE
Trigger: CTCTTTGAACACTTCTTGAAATTCAACTACAGCACAGCCCATTCAGCTGGCCTTACTCTGATCTGGTATTGGACTAGGCAGGACCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS TCA 90 bp CAGCATGAACACAGACTAATACATAGGCCATGCTACGTAACTCTATaGGCCTCGGTTTCCTTTCTTGGGAAGCTGAGAGGGCGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: QHEHRLIHRPCYVTL*ASVSFLGKLRGRSK
Trigger: TTTGCTGCGCCCTCTCAGCTTCCCAAGAAAGGAAACCGAGGCTCATAGAGTTACGTAGCATGGCCTATGTATTAGTCTGTGTTCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465496.1
CDS-3UTR CAA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCASKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp CCGATGGCTGGCTACTGCTTAGCAGTGACCATGGAAGCTCTGTGCACAGCAGATCAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: PMAGYCLAVTMEALCTADQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...ATCTGCTGTGCACAGAGCTTCCATGGTCACTGCTAAGCAGTAGCCAGCCATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGACCGCCTGGGACTTGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: FKDEYERPCSSLLDRLGLVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...AAGTCCCAGGCGGTCTAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: YSETENAMYPWVGMFGSLVPLCI*ELALSA
Trigger: AGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...CAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCGAGCTCCAGGAGGGCTaGGGTTCCCTGGAGCACGTA +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSELQEG*GSLEHV
Trigger: TACGTGCTCCAGGGAACCCAAGCCCTCCTGGAGCTC...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCAATGACATACAGAGGGTaGGTAGAGATAGTAGCCACC +
Preference number: 5 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPMTYRG*VEIVAT
Trigger: GGTGGCTACTATCTCTACCAACCCTCTGTATGTCAT...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp CATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACCACACACAGTAGCTGTAGGTTTTCTGTaGAGCTTCGTCCTACAGCTT +
Preference number: 5 (lower is better)
Translates to: HDIQRVGRDSSHHPPHTVAVGFL*SFVLQL
Trigger: AAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGC...TACTGTGTGTGGTGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTGGTGCTGGAGCTCTCTaGTTCTCAATCTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVGAGAL*FSISPF
Trigger: AAAAGGAGAGATTGAGAACAAGAGAGCTCCAGCACC...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCCAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp AGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SLIHYYGLDAVGLGAGALVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...GAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp GATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: DSLLWVRCRRARCWSSLVVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...AACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTACTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: TLVYSETENAMYPWVGMFTFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGT...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp GAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGTGCTACTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: ERHVSLGGYVWFFEEKCATFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGT...AGCACATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCVPLCI*ELALSA
Trigger: AGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKVPLCI*ELALSA
Trigger: AGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp GTCAGATTTTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCTCAACCACAATGAGCTaGGTGGCAATGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VRFSHRFMTYRGLVEIVASTTMS*VAMEFW
Trigger: CCAGAACTCCATTGCCACCAAGCTCATTGTGGTTGA...GGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAAAATCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGTCAACCACAATGAGCTaGGTGGCAATGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVSTTMS*VAMEFW
Trigger: CCAGAACTCCATTGCCACCAAGCTCATTGTGGTTGA...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTTGGTCTCTTGCTTTTTaGGTTCTGCTCATGTTCAGG +
Preference number: 5 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHAWSLAF*VLLMFR
Trigger: CCTGAACATGAGCAGAACCAAAAAAGCAAGAGACCA...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp TCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTGCTCCCTGGGAATGCAAACATCACATTCAATTaGGCATGTCAGGTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: SYSFHQNQLLSMLLPGNANITFN*ACQVKK
Trigger: TTTCTTGACCTGACATGCCAAATTGAATGTGATGTT...TGCATTCCCAGGGAGCAGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCCACCACAATGTTAATTaGGAGCTGAGAGATTCATCA +
Preference number: 5 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLHHNVN*ELRDSS
Trigger: TGATGAATCTCTCAGCTCCAAATTAACATTGTGGTG...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTCTCAATCTCTCCTTTaGTCCTTATTCACCACAATG +
Preference number: 5 (lower is better)
Translates to: LWVRCRRARCWSSLVLNLSQSLL*SLFTTM
Trigger: CATTGTGGTGAATAAGGACAAAAGGAGAGATTGAGA...GAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS GCA 90 bp GATTCATCACTGACCGCATCTATTACCTTTCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTTGGCACTTCTAGCATGACAGACATA +
Preference number: 5 (lower is better)
Translates to: DSSLTASITFLLHLG*FGNFAFGTSSMTDI
Trigger: TATGTCTGTCATGCTAGAAGTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATGCGGTCAGTGATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCTCATCTTCAAACACTaGGATTTGCCTCATGGTGTC +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLIFKH*DLPHGV
Trigger: GACACCATGAGGCAAATCCAAGTGTTTGAAGATGAG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: YGLDAVGLGAGALLFSISETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCACAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHVPLCI*ELALSA
Trigger: AGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTAAAATGACGTTGATGTaGCCCCGAGAGGCCATATTT +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSKMTLM*PREAIF
Trigger: AAATATGGCCTCTCGGGGCAACATCAACGTCATTTT...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 5 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp ACACTAGTTTACAGTGAGACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGCTGTAGGTTTTCTGTaGAGCTTCGTCCTACAGCTT +
Preference number: 5 (lower is better)
Translates to: TLVYSETENAMYPWVGMFAVGFL*SFVLQL
Trigger: AAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGC...AAACATACCCACCCAGGGATACATGGCGTTCTCTGTCTCACTGTAAACTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCCTTTCCATGCTATATGTGTTCTTCAGTaGCTTAGAGGGCCAATGATC +
Preference number: 5 (lower is better)
Translates to: FLLSFVLQLPPEPAPFHAICVLQ*LRGPMI
Trigger: GATCATTGGCCCTCTAAGCAACTGAAGAACACATAT...AGCATGGAAAGGAGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp CATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCACACCACAATGTTAATTaGGAGCTGAGAGATTCATCA +
Preference number: 5 (lower is better)
Translates to: HYYGLDAVGLGAGALLFSHHNVN*ELRDSS
Trigger: TGATGAATCTCTCAGCTCCAAATTAACATTGTGGTG...TGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCTCTTCTCAATCTCTCCTTTaGTCCTTATTCACCACAATG +
Preference number: 5 (lower is better)
Translates to: YGLDAVGLGAGALLFSISSQSLL*SLFTTM
Trigger: CATTGTGGTGAATAAGGACAAAAGGAGAGATTGAGA...AGAGATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS TCA 90 bp GTGTTTAAACACAGCGGCCCACTGCCCCCTGTGTACTCTATCCCATaGAGACTAGAGACAGCAATGGTTCTTTCCATCATCAAAATTCTA +
Preference number: 5 (lower is better)
Translates to: VFKHSGPLPPVYSIP*RLETAMVLSIIKIL
Trigger: TAGAATTTTGATGATGGAAAGAACCATTGCTGTCTCTAGTCTTCATGGGATAGAGTACACAGGGGGCAGTGGGCCGCTGTGTTTAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473566.1
CDS-3UTR CAA 90 bp TTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCGTTTCCGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LMTVSTVLALFSSFTFVSETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...GGAAACGAAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TGTGCTGTAGGTTTTCTGTTGAGCTTCGTCCTACAGCTTCCACCAGAACCAGCTCAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: CAVGFLLSFVLQLPPEPAQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...AGCTGGTTCTGGTGGAAGCTGTAGGACGAAGCTCAACAGAAAACCTACAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TTCCCACAGGTTCATGACATACAGAGGGTTGGTAGAGATAGTAGCCACCACCCACAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: FPQVHDIQRVGRDSSHHPQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...TGGGTGGTGGCTACTATCTCTACCAACCCTCTGTATGTCATGAACCTGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGACTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNETFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTACTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPTFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGT...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGACTTTCTGCTTCACCTaGGCTGCTTTGGCAACTTCG +
Preference number: 5 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMETFCFT*AALATS
Trigger: CGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGT...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTTGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGAAGAGTGTGTTAGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SDFRQLSHTDLLGPKKSVLEPEC*DFSPFQ
Trigger: CTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCTAA...CACACTCTTCTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp TTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTGCCTTACGACTTCTCCTCCTTaGAACGTGATCCAGACTGAT +
Preference number: 5 (lower is better)
Translates to: LLRGPMIYLTWKSNAMCLTTSPP*NVIQTD
Trigger: ATCAGTCTGGATCACGTTCAAAGGAGGAGAAGTCGT...AAGGCACATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp GCTTCATTGAAATGTATGGTACTGAACATCACATTCAATTTGGCATGTCAGGTCTACTCTAGGGGGCCCTaGTTCCCCCATCTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: ASLKCMVLNITFNLACQVYSRGP*FPHLWS
Trigger: ACTCCAAAGATGGGGGAACAAGGGCCCCCTAGAGTA...GACCTGACATGCCAAATTGAATGTGATGTTCAGTACCATACATTTCAATGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp TTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCAATCACCACAATGTTAATTaGGAGCTGAGAGATTCATCA +
Preference number: 5 (lower is better)
Translates to: LLWVRCRRARCWSSLVLNHHNVN*ELRDSS
Trigger: TGATGAATCTCTCAGCTCCAAATTAACATTGTGGTG...ATTGAGAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp ATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCTTGTTCTCTCAATCTCTCCTTTaGTCCTTATTCACCACAATG +
Preference number: 5 (lower is better)
Translates to: IHYYGLDAVGLGAGALLFSQSLL*SLFTTM
Trigger: CATTGTGGTGAATAAGGACAAAAGGAGAGATTGAGA...GAACAAGAGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS TCA 90 bp GGTAAAATAGGACCATCTCTAGCCAGTAAACATGGTAAACAACAATaGGAATCACCACTAGCAGGACTGTGGCTCCAAAACCACAAGCCA +
Preference number: 5 (lower is better)
Translates to: GKIGPSLASKHGKQQ*ESPLAGLWLQNHKP
Trigger: TGGCTTGTGGTTTTGGAGCCACAGTCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATGTTTACTGGCTAGAGATGGTCCTATTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS TCA 90 bp CATAGTCAGGGCTCAGAACAACAATCATCCTTCTGCTTCTCTGAATaGAATCAAAAACTGCTTCCACTGTATTTCCCCCAGGCAGACTGT +
Preference number: 5 (lower is better)
Translates to: HSQGSEQQSSFCFSE*NQKLLPLYFPQADC
Trigger: ACAGTCTGCCTGGGGGAAATACAGTGGAAGCAGTTTTTGATTTCATTCAGAGAAGCAGAAGGATGATTGTTGTTCTGAGCCCTGACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATCTCATCTTCAAACACTaGGATTTGCCTCATGGTGTC +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHLIFKH*DLPHGV
Trigger: GACACCATGAGGCAAATCCAAGTGTTTGAAGATGAG...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCESKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AAGTTTGATTCATTACTATGGGTTAGATGCCGTCGGGCTAGGTGCTGGAGCTCTCAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: KFDSLLWVRCRRARCWSSQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...AGAGCTCCAGCACCTAGCCCGACGGCATCTAACCCATAGTAATGAATCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCTTCACCTTGGCTGCTTaGGCAACTTCGCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSFTLAA*ATSPLA
Trigger: TGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAA...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKFSRPA*SSRRAW
Trigger: CCAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACTCTCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: TLKATKTDLRPLQWSNKNFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...GTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTAAAAGGAATGCAGCATaGGCAAGAGAATGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLKRNAA*AREWSF
Trigger: AAAGGACCATTCTCTTGCCAATGCTGCATTCCTTTT...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCTTGAATGTTCTCTATaGGCCATCTTCTGGAACATT +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLECSL*AIFWNI
Trigger: AATGTTCCAGAAGATGGCCAATAGAGAACATTCAAG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTGCTTAGAGGGCCAATGATCTACCTGACTTGGAAATCAAATGCCATGTGCCTTTTAGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLRGPMIYLTWKSNAMCLLEPEC*DFSPFQ
Trigger: CTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCTAA...AAGGCACATGGCATTTGATTTCCAAGTCAGGTAGATCATTGGCCCTCTAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGATTTTCTCTCCCTTCTaGGAGGACGACTCAATTCCG +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEIFSPF*EDDSIP
Trigger: CGGAATTGAGTCGTCCTCCAAGAAGGGAGAGAAAAT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439062.6
CDS CCA 90 bp TTTCCATGCAGAACAATTTCCAAAATGGGCAAAGAGCACAGTAGGTaGCTCTCTTTAATATTTCATGGGCAAGGCAACAGTGACTCACCA +
Preference number: 5 (lower is better)
Translates to: FPCRTISKMGKEHSR*LSLIFHGQGNSDSP
Trigger: TGGTGAGTCACTGTTGCCTTGCCCATGAAATATTAAAGAGAGCCACCTACTGTGCTCTTTGCCCATTTTGGAAATTGTTCTGCATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476929.1
CDS-3UTR CAA 90 bp TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCTCTTCAGCTCTTTCACCTTCAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: FPFNDREHRLSPLQLFHLQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...AAGGTGAAAGAGCTGAAGAGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEVPLCI*ELALSA
Trigger: AGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCECTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAAGGCCACTAAGACTGACCTCCGCCCTTTACAATGGAGCAACAAAAACGAGTGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 5 (lower is better)
Translates to: SRPLRLTSALYNGATKTSVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...ACTCGTTTTTGTTGCTCCATTGTAAAGGGCGGAGGTCAGTCTTAGTGGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGCAAGAGAATGGTCCTTaGGTGACTAGACTATTCCCT +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEQENGP*VTRLFP
Trigger: AGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTG...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATAAAAGGAATGCAGCATaGGCAAGAGAATGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHKRNAA*AREWSF
Trigger: AAAGGACCATTCTCTTGCCAATGCTGCATTCCTTTT...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCTTGAATGTTCTCTATaGGCCATCTTCTGGAACATT +
Preference number: 5 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCLECSL*AIFWNI
Trigger: AATGTTCCAGAAGATGGCCAATAGAGAACATTCAAG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGGATCCTTGTAGGCACTaGAATTTATTATCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKDPCRH*NLLSLL
Trigger: GAGAAGGGATAATAAATTCAAGTGCCTACAAGGATC...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp TCTACTGGATATTTAGTTAGGGTGGCCTGTCGTTTTCTGATTACAAGTTTCAGGCTCATCTTCAAACACTaGGATTTGCCTCATGGTGTC +
Preference number: 5 (lower is better)
Translates to: STGYLVRVACRFLITSFRLIFKH*DLPHGV
Trigger: GACACCATGAGGCAAATCCAAGTGTTTGAAGATGAG...CCTGAAACTTGTAATCAGAAAACGACAGGCCACCCTAACTAAATATCCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTCAAAGAGTGGGCACTaGATGCGAGCTGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSSKSGH*MRAGSS
Trigger: AGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGA...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGAGAACGCCATGTATCCCTGGGTGGGTATGTTTGGTTCTTTGAGGAAAAATGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: TENAMYPWVGMFGSLRKNETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...ATTTTTCCTCAAAGAACCAAACATACCCACCCAGGGATACATGGCGTTCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GATAGAGGATCAGACTTTAGGCAACTTTCACATACTGACCTTCTAGGGCCCAAGCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 5 (lower is better)
Translates to: DRGSDFRQLSHTDLLGPKLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...CTTGGGCCCTAGAAGGTCAGTATGTGAAAGTTGCCTAAAGTCTGATCCTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS-3UTR CAA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTATGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSLPCGY*DFSPFH
Trigger: ATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATGCAGCATTGGCAAGAGAATGGTCCTTTGGTGACTAGACTATTCCCTGTTTGCCTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 5 (lower is better)
Translates to: MQHWQENGPLVTRLFPVCLNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...GCAAACAGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTGCCAATGCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GACAATGTAGAAGGGGAAATTCGCATTGAACAAGTCTTTGCCTGCAAAGAACATAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: DNVEGEIRIEQVFACKEHKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...ATGTTCTTTGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTTCTACATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATAGTAGGAAATCAATTAATGCCCGATGGCTGGCTACTGCTTAGCAGTGACCATTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: IVGNQLMPDGWLLLSSDHFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...ATGGTCACTGCTAAGCAGTAGCCAGCCATCGGGCATTAATTGATTTCCTACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGTTCCACTGTGTATCTaGGAGCTGGCACTTTCGTTA +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEVPLCI*ELALSL
Trigger: TAACGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS TCA 90 bp TTATGCACTGGGAGTTTCATGGGGGAATTGAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAATGCAACTTTGCTGCAATATGTAGTG +
Preference number: 5 (lower is better)
Translates to: LCTGSFMGELKQLSF*TTSKGNATLLQYVV
Trigger: CACTACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAACTCCCAGTGCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCTCATCTTCAAACACTaGGATTTGCCTCATGGTGTC +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSLIFKH*DLPHGV
Trigger: GACACCATGAGGCAAATCCAAGTGTTTGAAGATGAG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATGGGGCACTGCATTTTTaGGAGAGCCTACTACCTTTA +
Preference number: 5 (lower is better)
Translates to: SISPFVLIHHNVNLELRDGALHF*ESLLPL
Trigger: TAAAGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCC...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVVPLCI*ELALSA
Trigger: AGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072516.7
ENST00000412504.6
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTGTACTAAAATGACGTaGATGTTGCCCCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKCTKMT*MLPREA
Trigger: GGCCTCTCGGGGCAACATCAACGTCATTTTAGTACA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 5 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMEVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CTTTGTATCATCCTAAGTGGATGTCAGTCTTGCTGTGGTTATGTATTATACAGCCAAGAGAATGGTCCTTaGGTGACTAGACTATTCCCT +
Preference number: 5 (lower is better)
Translates to: LCIILSGCQSCCGYVLYSQENGP*VTRLFP
Trigger: AGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTG...GCTGTATAATACATAACCACAGCAAGACTGACATCCACTTAGGATGATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACAAGAGAATGGTCCTTaGGTGACTAGACTATTCCCT +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEQENGP*VTRLFP
Trigger: AGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTACAAGAGAATGGTCCTTaGGTGACTAGACTATTCCCT +
Preference number: 5 (lower is better)
Translates to: KLREGKNYDNYHSVSCELQENGP*VTRLFP
Trigger: AGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTG...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATGGTGCTGGAGCTCTCTaGTTCTCAATCTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SISPFVLIHHNVNLELRDGAGAL*FSISPF
Trigger: AAAAGGAGAGATTGAGAACAAGAGAGCTCCAGCACC...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp TCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTTGGAGCTGAGAGATGTCCACCAAACCTCATaGCGAGAATCCATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SISPFVLIHHNVNLELRDVHQTS*RESIRK
Trigger: TTTTCTGATGGATTCTCGCAATGAGGTTTGGTGGAC...ATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS-3UTR CAA 90 bp CTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 5 (lower is better)
Translates to: LSIAPLGDFFQTEPSMEPLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...AGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTAAAATGACGTTGATGTaGCCCCGAGAGGCCATATTT +
Preference number: 5 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSKMTLM*PREAIF
Trigger: AAATATGGCCTCTCGGGGCAACATCAACGTCATTTT...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVLPCGY*DFSPFH
Trigger: ATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCCTGCCCTGTGGATACTaGGATTTTTCCCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSLPCGY*DFSPFH
Trigger: ATGGAAAGGGGAAAAATCCAAGTATCCACAGGGCAG...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCCTCTCTATAGCACCATTAGGAGATTTCTTTCAGACTGAACCTAGTATGGAGCTAAATTTATCCCTATaGGGAGGCTTAGACCATTAT +
Preference number: 5 (lower is better)
Translates to: SLSIAPLGDFFQTEPSMELNLSL*GGLDHY
Trigger: ATAATGGTCTAAGCCTCCCAATAGGGATAAATTTAG...CTCCATACTAGGTTCAGTCTGAAAGAAATCTCCTAATGGTGCTATAGAGAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGCATTGAACAAGTCTTaGCCTGCAAAGAACATAGTG +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEALNKS*PAKNIV
Trigger: CACTATGTTCTTTGCAGGCAAAGACTTGTTCAATGC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp GAGATTTCTTTCAGACTGAACCTAGTATGGAGCCTCCTGCAAACTCTAAATGAGAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 5 (lower is better)
Translates to: EISFRLNLVWSLLQTLNEKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...CTCATTTAGAGTTTGCAGGAGGCTCCATACTAGGTTCAGTCTGAAAGAAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAAAAAGGAATGCAGCATaGGCAAGAGAATGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: KLREGKNYDNYHSVSCELKRNAA*AREWSF
Trigger: AAAGGACCATTCTCTTGCCAATGCTGCATTCCTTTT...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTACTTGAATGTTCTCTATaGGCCATCTTCTGGAACATT +
Preference number: 5 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLLECSL*AIFWNI
Trigger: AATGTTCCAGAAGATGGCCAATAGAGAACATTCAAG...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGGTTCCACTGTGTATCTaGGAGCTGGCACTTTCGTTA +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKVPLCI*ELALSL
Trigger: TAACGAAAGTGCCAGCTCCAAGATACACAGTGGAAC...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACAAGTGATAGTCGGTTaGACACTGGAAGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEQVIVG*TLEGKY
Trigger: ATATTTTCCTTCCAGTGTCAAACCGACTATCACTTG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCAAAATGACGTTGATGTaGCCCCGAGAGGCCATATTT +
Preference number: 5 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSKMTLM*PREAIF
Trigger: AAATATGGCCTCTCGGGGCAACATCAACGTCATTTT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAAAATGACGTTGATGTaGCCCCGAGAGGCCATATTT +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKKMTLM*PREAIF
Trigger: AAATATGGCCTCTCGGGGCAACATCAACGTCATTTT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAATTAGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 5 (lower is better)
Translates to: KLREGKNYDNYHSVSCELVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...TAATTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAAGGGGAAATTCGCATaGAACAAGTCTTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKKGKFA*NKSLPA
Trigger: TGCAGGCAAAGACTTGTTCAATGCGAATTTCCCCTT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 5 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TCCTTTCATACATTTTTCAAAGATGAATACGAGAGGCCCTGCTCATCACTGCTAGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 5 (lower is better)
Translates to: SFHTFFKDEYERPCSSLLVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...TAGCAGTGATGAGCAGGGCCTCTCGTATTCATCTTTGAAAAATGTATGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCCAAGAGAATGGTCCTTaGGTGACTAGACTATTCCCT +
Preference number: 5 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSQENGP*VTRLFP
Trigger: AGGGAATAGTCTAGTCACCAAAGGACCATTCTCTTG...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAACTTGAATGTTCTCTATaGGCCATCTTCTGGAACATT +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCELECSL*AIFWNI
Trigger: AATGTTCCAGAAGATGGCCAATAGAGAACATTCAAG...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp CAAGGATGGATTATTCTTTACAAGAAGGGATTTAATAGAGGACAAGGCCTTTGGAATGATCTACCTGACTaGGAAATCAAATGCCATGTG +
Preference number: 5 (lower is better)
Translates to: QGWIILYKKGFNRGQGLWNDLPD*EIKCHV
Trigger: CACATGGCATTTGATTTCCAAGTCAGGTAGATCATT...CCAAAGGCCTTGTCCTCTATTAAATCCCTTCTTGTAAAGAATAATCCATCCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317757.7
CDS TCA 90 bp ACACTGGAAGGAAAATATCCATCTACATTTGGACAAGTGATCCTCTaGATGCCATATTCTATATACAGTTTATGCACTGGGAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: TLEGKYPSTFGQVIL*MPYSIYSLCTGSFM
Trigger: CATGAAACTCCCAGTGCATAAACTGTATATAGAATATGGCATTCAGAGGATCACTTGTCCAAATGTAGATGGATATTTTCCTTCCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCTGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: FFSGLVSEGLIEGVIVVSETAVF*NNFQGK
Trigger: TTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTC...AGAAACCACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 5 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCTGTGAAGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 5 (lower is better)
Translates to: YKLREGKNYDNYHSVSCEVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...TTCACAGCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCAAAAGGAATGCAGCATaGGCAAGAGAATGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSKRNAA*AREWSF
Trigger: AAAGGACCATTCTCTTGCCAATGCTGCATTCCTTTT...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ATCTGGAATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTACTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 5 (lower is better)
Translates to: IWNKFFSGLVSEGLIEGVLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...TACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATTCCAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTTTCCTTCACAGCTTaGTACTGTACTAAAATGACG +
Preference number: 5 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVVSFTA*YCTKMT
Trigger: CGTCATTTTAGTACAGTACAAAGCTGTGAAGGAAAC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGTTCAGTTACACTGCTTaGTATCATCCTAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKFSYTA*YHPKWM
Trigger: CATCCACTTAGGATGATACAAAGCAGTGTAACTGAA...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp TATTTATATAAACTTAGGGAAGGCAAGAACTATGACAACTATCACTCTGTGAGCCTTGAATGTTCTCTATaGGCCATCTTCTGGAACATT +
Preference number: 5 (lower is better)
Translates to: YLYKLREGKNYDNYHSVSLECSL*AIFWNI
Trigger: AATGTTCCAGAAGATGGCCAATAGAGAACATTCAAG...GCTCACAGAGTGATAGTTGTCATAGTTCTTGCCTTCCCTAAGTTTATATAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGCTTCTTCCGCATTCCTaGCATAGGATACATAAATAT +
Preference number: 5 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVLLPHS*HRIHKY
Trigger: ATATTTATGTATCCTATGCAAGGAATGCGGAAGAAG...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp ACAGTTAATTCTCTTAGAATATTAATGCCAAAAGCAACTCTCAAGGCCACTAAGAAGTGGATGTCAGTCTaGCTGTGGTTATGTATTATA +
Preference number: 5 (lower is better)
Translates to: TVNSLRILMPKATLKATKKWMSV*LWLCII
Trigger: TATAATACATAACCACAGCAAGACTGACATCCACTT...CTTAGTGGCCTTGAGAGTTGCTTTTGGCATTAATATTCTAAGAGAATTAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS-3UTR CAA 90 bp AATAAGTTCTTTTCTGGTCTAGTAAGTGAAGGGTTAATAGAGGGAGTAATTGTGGTGGATAATCAGGAATaGACTGGAGCAAAAACAAAA +
Preference number: 5 (lower is better)
Translates to: NKFFSGLVSEGLIEGVIVVDNQE*TGAKTK
Trigger: TTTTGTTTTTGCTCCAGTCAATTCCTGATTATCCAC...CACAATTACTCCCTCTATTAACCCTTCACTTACTAGACCAGAAAAGAACTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000447382.6
CDS GCA 72 bp AAAAGCAGCCGGGATGGGTGCAGTGTCGCCGGGCACTaGTTCCTTCCGCGCCTCTGGCCAAAGCGGACCCCG +
Preference number: 6 (lower is better)
Translates to: KSSRDGCSVAGH*FLPRLWPKRTP
Trigger: CGGGGTCCGCTTTGGCCAGAGGCGCGGAAGGAAGCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000447382.6
ENST00000461629.1
ENST00000465496.1
ENST00000473566.1
CDS GCA 72 bp AAGCTGAGAGGGCGCAGCAAAAGCAGCCGGGATGGGTaGAGTGTCGCCGGGCACTGCTTCCTTCCGCGCCTC +
Preference number: 6 (lower is better)
Translates to: KLRGRSKSSRDG*SVAGHCFLPRL
Trigger: GAGGCGCGGAAGGAAGCAGTGCCCGGCGACACTGCACCCATCCCGGCTGCTTTTGCTGCGCCCTCTCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000447382.6
ENST00000461629.1
ENST00000465496.1
ENST00000473566.1
CDS GCA 72 bp ACACAACAGCGGCAGGTGGCGGAGGACTTCCCTCGGTaGTTGGACATTGTGCCTGGGGCTGGAGGGCTACCT +
Preference number: 6 (lower is better)
Translates to: TQQRQVAEDFPR*LDIVPGAGGLP
Trigger: AGGTAGCCCTCCAGCCCCAGGCACAATGTCCAAGCACCGAGGGAAGTCCTCCGCCACCTGCCGCTGTTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS TCA 72 bp GGTGATGATCACATGACGATGCCTTTCTTGGGAAGCTaGGAGGGCGCAGCAAAAGCAGCCGGGATGGGTGCA +
Preference number: 6 (lower is better)
Translates to: GDDHMTMPFLGS*EGAAKAAGMGA
Trigger: TGCACCCATCCCGGCTGCTTTTGCTGCGCCCTCTCAGCTTCCCAAGAAAGGCATCGTCATGTGATCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317757.7
ENST00000413869.5
ENST00000422485.5
ENST00000447382.6
ENST00000461629.1
CDS TCA 72 bp CCCTTCCAGCTCACAAAAGACACAGACTCTTTGAGCTaGAGAATGCCTGGGTGCGGGTGCTCAAGGGGACGG +
Preference number: 6 (lower is better)
Translates to: PFQLTKDTDSLS*RMPGCGCSRGR
Trigger: CCGTCCCCTTGAGCACCCGCACCCAGGCATTCTTCAGCTCAAAGAGTCTGTGTCTTTTGTGAGCTGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CAA 90 bp CCTGGGTGCGGGTGCTCAAGGGGACGGTACTCAACCACAATGAGCTaGGTGGCAATGGAGTTCTGGCACATGACACCCAGTTTAAACTCC +
Preference number: 6 (lower is better)
Translates to: PGCGCSRGRYSTTMS*VAMEFWHMTPSLNS
Trigger: GGAGTTTAAACTGGGTGTCATGTGCCAGAACTCCATTGCCACCAAGCTCATTGTGGTTGAGTACCGTCCCCTTGAGCACCCGCACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CAA 72 bp GGGTGCTCAAGGGGACGGTACTCAACCACAATGAGCTaGGTGGCAATGGAGTTCTGGCACATGACACCCAGT +
Preference number: 6 (lower is better)
Translates to: GCSRGRYSTTMS*VAMEFWHMTPS
Trigger: ACTGGGTGTCATGTGCCAGAACTCCATTGCCACCAAGCTCATTGTGGTTGAGTACCGTCCCCTTGAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS GCA 72 bp AGGCGGAAGTTAATTGGCTCCTCAAGGTCCCGGTCCTaGCTAGTCCAATACCAGATCAGAGTAAGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: RRKLIGSSRSRS*LVQYQIRVRPA
Trigger: AGCTGGCCTTACTCTGATCTGGTATTGGACTAGGCAGGACCGGGACCTTGAGGAGCCAATTAACTTCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS GCA 72 bp GAGGTGTGTCTCCCACTGGGGCTGGTTATGAATCTCTaGCCGGCTCTTGTTCCTAAGGTGATTCTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: EVCLPLGLVMNL*PALVPKVILSF
Trigger: GAAGGAGAGAATCACCTTAGGAACAAGAGCCGGGCAGAGATTCATAACCAGCCCCAGTGGGAGACACACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CCA 72 bp CTTACTAATGCGGTTCTCGGGGAGGCGGAAGTTAATTaGCTCCTCAAGGTCCCGGTCCTGCCTAGTCCAATA +
Preference number: 6 (lower is better)
Translates to: LTNAVLGEAEVN*LLKVPVLPSPI
Trigger: TATTGGACTAGGCAGGACCGGGACCTTGAGGAGCCAATTAACTTCCGCCTCCCCGAGAACCGCATTAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS TCA 72 bp TTTCTCCCTTCCAGCTCACAAAAGACACAGACTCTTTaGGCTGAAGAATGCCTGGGTGCGGGTGCTCAAGGG +
Preference number: 6 (lower is better)
Translates to: FLPSSSQKTQTL*AEECLGAGAQG
Trigger: CCCTTGAGCACCCGCACCCAGGCATTCTTCAGCTCAAAGAGTCTGTGTCTTTTGTGAGCTGGAAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS TCA 72 bp TTTGCTGCAATATGTAGTGTTCCTTTCTTGGGAAGCTaGGAGGGCGCAGCAAAAGCAGCCGGGATGGGTGCA +
Preference number: 6 (lower is better)
Translates to: FAAICSVPFLGS*EGAAKAAGMGA
Trigger: TGCACCCATCCCGGCTGCTTTTGCTGCGCCCTCTCAGCTTCCCAAGAAAGGAACACTACATATTGCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434491.5
CDS TCA 72 bp CCCACATGTTGTGGGAGGGACCCAGTGGGAGATGATTaGATCATGTGGGGTAGGTCTGTCCCATGCTATTCT +
Preference number: 6 (lower is better)
Translates to: PTCCGRDPVGDD*IMWGRSVPCYS
Trigger: AGAATAGCATGGGACAGACCTACCCCACATGATTCAATCATCTCCCACTGGGTCCCTCCCACAACATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465496.1
CDS TCA 72 bp CACAGCGGCCCACTGCCCCCTGTGTACTCTATCCCATaGAGACTAGAGACAGCAATGGTTCTTTCCATCATC +
Preference number: 6 (lower is better)
Translates to: HSGPLPPVYSIP*RLETAMVLSII
Trigger: GATGATGGAAAGAACCATTGCTGTCTCTAGTCTTCATGGGATAGAGTACACAGGGGGCAGTGGGCCGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473566.1
CDS CCA 72 bp GAGCTGGCTCATCTTCAAACACTTGGATTTGCCTCATaGTGTCTAGTCCCCAGTCATCGCAGCGTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: ELAHLQTLGFAS*CLVPSHRSVLR
Trigger: CCTCAGAACGCTGCGATGACTGGGGACTAGACACCATGAGGCAAATCCAAGTGTTTGAAGATGAGCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS CCA 72 bp GGGCACTTGATGCGAGCTGGCTCATCTTCAAACACTTaGATTTGCCTCATGGTGTCTAGTCCCCAGTCATCG +
Preference number: 6 (lower is better)
Translates to: GHLMRAGSSSNT*ICLMVSSPQSS
Trigger: CGATGACTGGGGACTAGACACCATGAGGCAAATCCAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS GCA 72 bp TTGATGCGAGCTGGCTCATCTTCAAACACTTGGATTTaGCTCATGGTGTCTAGTCCCCAGTCATCGCAGCGT +
Preference number: 6 (lower is better)
Translates to: LMRAGSSSNTWI*LMVSSPQSSQR
Trigger: ACGCTGCGATGACTGGGGACTAGACACCATGAGGCAAATCCAAGTGTTTGAAGATGAGCCAGCTCGCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS CAA 72 bp TGGCTCCAAAACCACAAGCCAGTTCCACTGTGTATCTaGGAGCTGGCACTTTCTGCTTCACCTTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: WLQNHKPVPLCI*ELALSASPWLL
Trigger: AAGCAGCCAAGGTGAAGCAGAAAGTGCCAGCTCCAAGATACACAGTGGAACTGGCTTGTGGTTTTGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000412504.6
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS GCA 72 bp CTGACCGCATCTATTACCTTTCTGCTTCACCTTGGCTaGTTTGGCAACTTCGCCTTTGGCACTTCTAGCATG +
Preference number: 6 (lower is better)
Translates to: LTASITFLLHLG*FGNFAFGTSSM
Trigger: CATGCTAGAAGTGCCAAAGGCGAAGTTGCCAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATGCGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS TCA 72 bp CACAGACTAATACATAGGCCATGCTACGTAACTCTATaGGCCTCGGTTTCCTTTCTTGGGAAGCTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: HRLIHRPCYVTL*ASVSFLGKLRG
Trigger: CCCTCTCAGCTTCCCAAGAAAGGAAACCGAGGCTCATAGAGTTACGTAGCATGGCCTATGTATTAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465496.1
CDS CCA 72 bp TACTCAACCACAATGAGCTTGGTGGCAATGGAGTTCTaGCACATGACACCCAGTTTAAACTCCAGCATGCTG +
Preference number: 6 (lower is better)
Translates to: YSTTMSLVAMEF*HMTPSLNSSML
Trigger: CAGCATGCTGGAGTTTAAACTGGGTGTCATGTGCCAGAACTCCATTGCCACCAAGCTCATTGTGGTTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CAA 72 bp AAGTTCTGGGGGCTCTTTCAAACGACTTCTCCTCCTTaGAACGTGATCCAGACTGATGTCAGACTGGGAAGA +
Preference number: 6 (lower is better)
Translates to: KFWGLFQTTSPP*NVIQTDVRLGR
Trigger: TCTTCCCAGTCTGACATCAGTCTGGATCACGTTCAAAGGAGGAGAAGTCGTTTGAAAGAGCCCCCAGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CAA 90 bp ACTGTATTTCCCCCAGGCAGACTGTCTCGGTCAAAGATGCACAGCTaGTATCCAAATTCATTCTCCAAAACTCCACGGAGGGTCAGTAAT +
Preference number: 6 (lower is better)
Translates to: TVFPPGRLSRSKMHS*YPNSFSKTPRRVSN
Trigger: ATTACTGACCCTCCGTGGAGTTTTGGAGAATGAATTTGGATACAAGCTGTGCATCTTTGACCGAGACAGTCTGCCTGGGGGAAATACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS TCA 72 bp CTGCCTAGTCCAATACCAGATCAGAGTAAGGCCAGCTaGATGGGCTGTGCTGTAGTTGAATTTCAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: LPSPIPDQSKAS*MGCAVVEFQEV
Trigger: CACTTCTTGAAATTCAACTACAGCACAGCCCATTCAGCTGGCCTTACTCTGATCTGGTATTGGACTAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS TCA 72 bp CAATGCATGTACATGGAACAAGCTGATAGAAGCAGGTaGTCCCATCCTTTACTAATGCTTGGTGCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: QCMYMEQADRSR*SHPLLMLGAGG
Trigger: ACCTCCCGCACCAAGCATTAGTAAAGGATGGGATCACCTGCTTCTATCAGCTTGTTCCATGTACATGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476929.1
CDS CCA 72 bp CAAGAAGTGTTCAAAGAGTGGGCACTTGATGCGAGCTaGCTCATCTTCAAACACTTGGATTTGCCTCATGGT +
Preference number: 6 (lower is better)
Translates to: QEVFKEWALDAS*LIFKHLDLPHG
Trigger: ACCATGAGGCAAATCCAAGTGTTTGAAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS CAA 90 bp GGAAGAGCCAACCGCAAAGCTTTCCAGAATTTAGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAGCTCACAAAAGACACAGACTCTTTG +
Preference number: 6 (lower is better)
Translates to: GRANRKAFQNLEPEC*DFSPFQLTKDTDSL
Trigger: CAAAGAGTCTGTGTCTTTTGTGAGCTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCTAAATTCTGGAAAGCTTTGCGGTTGGCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS TCA 72 bp GGACCATCTCTAGCCAGTAAACATGGTAAACAACAATaGGAATCACCACTAGCAGGACTGTGGCTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: GPSLASKHGKQQ*ESPLAGLWLQN
Trigger: GTTTTGGAGCCACAGTCCTGCTAGTGGTGATTCTCATTGTTGTTTACCATGTTTACTGGCTAGAGATGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS TCA 72 bp GTGGCTCTCTTTAATATTTCATGGGCAAGGCAACAGTaGCTCACCAGATCCTACATCTGTGTCACCAGCAAA +
Preference number: 6 (lower is better)
Translates to: VALFNISWARQQ*LTRSYICVTSK
Trigger: TTTGCTGGTGACACAGATGTAGGATCTGGTGAGTCACTGTTGCCTTGCCCATGAAATATTAAAGAGAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476929.1
CDS CCA 72 bp ATCTGTGTCACCAGCAAAAGCCACAATGCATGTACATaGAACAAGCTGATAGAAGCAGGTGATCCCATCCTT +
Preference number: 6 (lower is better)
Translates to: ICVTSKSHNACT*NKLIEAGDPIL
Trigger: AAGGATGGGATCACCTGCTTCTATCAGCTTGTTCCATGTACATGCATTGTGGCTTTTGCTGGTGACACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476929.1
CDS CAA 72 bp TGGCTCCAAAACCACAAGCCAGTTCCACTGTGTATCTaGGAGCTGGCACTTTCGTTAATGGTGACATCAATA +
Preference number: 6 (lower is better)
Translates to: WLQNHKPVPLCI*ELALSLMVTSI
Trigger: TATTGATGTCACCATTAACGAAAGTGCCAGCTCCAAGATACACAGTGGAACTGGCTTGTGGTTTTGGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342550.6
ENST00000413869.5
CDS CCA 72 bp TGTGCTGTAGTTGAATTTCAAGAAGTGTTCAAAGAGTaGGCACTTGATGCGAGCTGGCTCATCTTCAAACAC +
Preference number: 6 (lower is better)
Translates to: CAVVEFQEVFKE*ALDASWLIFKH
Trigger: GTGTTTGAAGATGAGCCAGCTCGCATCAAGTGCCCACTCTTTGAACACTTCTTGAAATTCAACTACAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422625.5
ENST00000422940.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS TCA 72 bp GGGAGTTTCATGGGGGAATTGAAACAGCTGTCTTTTTaGACAACTTCCAAGGGAAATGCAACTTTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: GSFMGELKQLSF*TTSKGNATLLQ
Trigger: TTGCAGCAAAGTTGCATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAACTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
ENST00000453359.5
CDS TCA 72 bp GAGCCTACTACCTTTACAGTCAGAGTCCTGGTGAGATaGAACGTACGTCCATTTTCTGGATATGTAACAACA +
Preference number: 6 (lower is better)
Translates to: EPTTFTVRVLVR*NVRPFSGYVTT
Trigger: TGTTGTTACATATCCAGAAAATGGACGTACGTTTCATCTCACCAGGACTCTGACTGTAAAGGTAGTAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412080.1
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS CCA 72 bp CTAGAGACAAGTTTCAATAACATCACCACGATCCTTTaGCTAGAGAGTGGTAGAGCTATGATCAAACTCCAG +
Preference number: 6 (lower is better)
Translates to: LETSFNNITTIL*LESGRAMIKLQ
Trigger: CTGGAGTTTGATCATAGCTCTACCACTCTCTAGCCAAAGGATCGTGGTGATGTTATTGAAACTTGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412504.6
CDS CAA 72 bp AACCGCAAAGCTTTCCAGAATTTAGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAGCTCACAAAAGACACA +
Preference number: 6 (lower is better)
Translates to: NRKAFQNLEPEC*DFSPFQLTKDT
Trigger: TGTGTCTTTTGTGAGCTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCTAAATTCTGGAAAGCTTTGCGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317757.7
ENST00000443369.6
CDS CAA 72 bp CCATGTGGAACTATAAGTCCAATGAACCTCTTTCTTTaGCAAACTGCCCAGTCTTGGGTCTGTCTTTATCAG +
Preference number: 6 (lower is better)
Translates to: PCGTISPMNLFL*QTAQSWVCLYQ
Trigger: CTGATAAAGACAGACCCAAGACTGGGCAGTTTGCAAAAGAAAGAGGTTCATTGGACTTATAGTTCCACATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465496.1
CDS CCA 72 bp AGAACAATTTCCAAAATGGGCAAAGAGCACAGTAGGTaGCTCTCTTTAATATTTCATGGGCAAGGCAACAGT +
Preference number: 6 (lower is better)
Translates to: RTISKMGKEHSR*LSLIFHGQGNS
Trigger: ACTGTTGCCTTGCCCATGAAATATTAAAGAGAGCCACCTACTGTGCTCTTTGCCCATTTTGGAAATTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476929.1
CDS CAA 90 bp TTTATGCACTGGGAGTTTCATGGGGGAATTGAAACAGCTGTCTTTTaGAACAACTTCCAAGGGAAATGCAACTTTGCTGCAATATGTAGT +
Preference number: 6 (lower is better)
Translates to: FMHWEFHGGIETAVF*NNFQGKCNFAAICS
Trigger: ACTACATATTGCAGCAAAGTTGCATTTCCCTTGGAAGTTGTTCAAAAAGACAGCTGTTTCAATTCCCCCATGAAACTCCCAGTGCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS CAA 90 bp TTGTTCTCAATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTaGGAGCTGAGAGATTCATCACTGACCGCATCTATTACCTTTCTG +
Preference number: 6 (lower is better)
Translates to: LFSISPFVLIHHNVN*ELRDSSLTASITFL
Trigger: CAGAAAGGTAATAGATGCGGTCAGTGATGAATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGATTGAGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS CAA 72 bp ATCTCTCCTTTTGTCCTTATTCACCACAATGTTAATTaGGAGCTGAGAGATTCATCACTGACCGCATCTATT +
Preference number: 6 (lower is better)
Translates to: ISPFVLIHHNVN*ELRDSSLTASI
Trigger: AATAGATGCGGTCAGTGATGAATCTCTCAGCTCCAAATTAACATTGTGGTGAATAAGGACAAAAGGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412080.1
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
CDS TCA 72 bp GGAAAATATCCATCTACATTTGGACAAGTGATCCTCTaGATGCCATATTCTATATACAGTTTATGCACTGGG +
Preference number: 6 (lower is better)
Translates to: GKYPSTFGQVIL*MPYSIYSLCTG
Trigger: CCCAGTGCATAAACTGTATATAGAATATGGCATTCAGAGGATCACTTGTCCAAATGTAGATGGATATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6
CDS CCA 72 bp CGGTTTGACACTGGAAGGAAAATATCCATCTACATTTaGACAAGTGATCCTCTGAATGCCATATTCTATATA +
Preference number: 6 (lower is better)
Translates to: RFDTGRKISIYI*TSDPLNAIFYI
Trigger: TATATAGAATATGGCATTCAGAGGATCACTTGTCCAAATGTAGATGGATATTTTCCTTCCAGTGTCAAACCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000072516.7
ENST00000317757.7
ENST00000342550.6
ENST00000412504.6
ENST00000413869.5
ENST00000422485.5
ENST00000422940.5
ENST00000434491.5
ENST00000439062.6
ENST00000443369.6
ENST00000447382.6