RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL1R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115594

Ensembl transcript IDs: ENST00000409288.5, ENST00000409329.5, ENST00000409589.5, ENST00000409929.5, ENST00000410023.6, ENST00000413623.5, ENST00000422532.2, ENST00000424272.5, ENST00000428279.5, ENST00000430171.1, ENST00000442590.5, ENST00000450319.5, ENST00000452403.5

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTaGGAATTCACACAGCAGGACAGCGAGGGGAAGCTGGAGGACAGG +
Preference number: 1 (lower is better)
Translates to: DRGVLGAGDMATRPT*EFTQQDSEGKLEDR
Trigger: CCTGTCCTCCAGCTTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 90 bp GTGCAGGCAAGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATaGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGG +
Preference number: 1 (lower is better)
Translates to: VQARAETEECWGQAT*PPGQPGNSHSRTAR
Trigger: CCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCTTGCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 90 bp CTGGTGGGAAAGCATGGGCTTCAGCTCCTGAACAGGTGGAGCCCCTaGGAGGTGTTTCAGCAGGAGCGGGATGACAGAAGAGCGGCATCA +
Preference number: 1 (lower is better)
Translates to: LVGKHGLQLLNRWSP*EVFQQERDDRRAAS
Trigger: TGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGAAACACCTCCCAGGGGCTCCACCTGTTCAGGAGCTGAAGCCCATGCTTTCCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR GCA 90 bp GACAGAAGAGCGGCATCATGGGAAGGATGGTTCATGTGTGGGCTGTaGAAGGGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: DRRAASWEGWFMCGL*KGHCRRRKPLGSCS
Trigger: GGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATGAACCATCCTTCCCATGATGCCGCTCTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 90 bp TTTCAGCAGGAGCGGGATGACAGAAGAGCGGCATCATGGGAAGGATaGTTCATGTGTGGGCTGTGCAAGGGACATTGCAGACGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: FQQERDDRRAASWEG*FMCGLCKGHCRRRK
Trigger: CTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATGAACCATCCTTCCCATGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 90 bp TGGGAGGTGTTTCAGCAGGAGCGGGATGACAGAAGAGCGGCATCATaGGAAGGATGGTTCATGTGTGGGCTGTGCAAGGGACATTGCAGA +
Preference number: 1 (lower is better)
Translates to: WEVFQQERDDRRAAS*EGWFMCGLCKGHCR
Trigger: TCTGCAATGTCCCTTGCACAGCCCACACATGAACCATCCTTCCCATGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGAAACACCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR GCA 90 bp AGAATATGTCTCCCTTCCTCAGTGAGGTGTCAGTCTCACTTTGCCTaGAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACA +
Preference number: 1 (lower is better)
Translates to: RICLPSSVRCQSHFA*STSQESRSRVSDST
Trigger: TGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAAGTGAGACTGACACCTCACTGAGGAAGGGAGACATATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 90 bp ACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCCTTCCTCAGTaGGGTGTCAGTCTCACTTTGCCTGCAGCACCTCTCAGGAGAGCC +
Preference number: 1 (lower is better)
Translates to: TSRWKVLQEYVSLPQ*GVSLTLPAAPLRRA
Trigger: GGCTCTCCTGAGAGGTGCTGCAGGCAAAGTGAGACTGACACCTCACTGAGGAAGGGAGACATATTCTTGGAGAACTTTCCATCTGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 90 bp CCTAAAGAACTCTTGGCAACTTCTCCATGCTACCCGAGAGGCACGTaGGCCTCTCTTTGCAGTTTCTCCTTAGTGGCTGGTGACAGTAAC +
Preference number: 1 (lower is better)
Translates to: PKELLATSPCYPRGT*ASLCSFSLVAGDSN
Trigger: GTTACTGTCACCAGCCACTAAGGAGAAACTGCAAAGAGAGGCTCACGTGCCTCTCGGGTAGCATGGAGAAGTTGCCAAGAGTTCTTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR CCA 90 bp GTGGCTGGTGACAGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTaGACTGGCATGTGGTACCTGACATTCTTCCAGAACCTTGTCTTT +
Preference number: 1 (lower is better)
Translates to: VAGDSNWCLDEGDRR*TGMWYLTFFQNLVF
Trigger: AAAGACAAGGTTCTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACTGTCACCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR GCA 90 bp AGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATaGAGGATAATAACAAAGGACAGGATGGTCATGCCAGGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: RRRKPLGSCSSKDVK*RIITKDRMVMPGRK
Trigger: TTTCCTCCCTGGCATGACCATCCTGTCCTTTGTTATTATCCTGCATTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 90 bp AGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTaGTACCTGACATTCTTCCAGAACCTTGTCTTTGCAGACTGTGGT +
Preference number: 1 (lower is better)
Translates to: SNWCLDEGDRRWTGM*YLTFFQNLVFADCG
Trigger: ACCACAGTCTGCAAAGACAAGGTTCTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR TCA 90 bp CCAGAACCTTGTCTTTGCAGACTGTGGTCCCTGTGTAAAGTCCCCTaGCCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCGA +
Preference number: 1 (lower is better)
Translates to: PEPCLCRLWSLCKVP*PADSPMFLLNEFNR
Trigger: TCGATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACAGGGACCACAGTCTGCAAAGACAAGGTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR TCA 90 bp CTGACCCATTCCACTTCCAGTAAGCAATGTCACTCAACTGGCCGGTaGCATTACAGATCAATTGTATCTGGGATCCCAAGTCTACTTCCA +
Preference number: 1 (lower is better)
Translates to: LTHSTSSKQCHSTGR*HYRSIVSGIPSLLP
Trigger: TGGAAGTAGACTTGGGATCCCAGATACAATTGATCTGTAATGTCACCGGCCAGTTGAGTGACATTGCTTACTGGAAGTGGAATGGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR GCA 90 bp CCTACTGCCTTTTTAAAAGATCTTCCCAAGCCCTCTACTCTGAAGTaGCCTGGGCTGCTATTGACGTCATGGCTTATTCCCTTAATAATC +
Preference number: 1 (lower is better)
Translates to: PTAFLKDLPKPSTLK*PGLLLTSWLIPLII
Trigger: GATTATTAAGGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGGGAAGATCTTTTAAAAAGGCAGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR GCA 90 bp GGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTCCATaGCTTTTCTTGGCAGTTCAAACATTCAGAGAGGGCATTTATTGC +
Preference number: 1 (lower is better)
Translates to: GGYFLLALSSSSLSP*LFLAVQTFREGIYC
Trigger: GCAATAAATGCCCTCTCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR GCA 90 bp CACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATTCCAGCTaGCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCT +
Preference number: 1 (lower is better)
Translates to: HPRLSIDSCPSLNSS*HSTCNSWSSSPPLS
Trigger: AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 90 bp TGCCCTGGGCTGCTATTGACGTCATGGCTTATTCCCTTAATAATCTaGTTCCAGGTGACCTCAGGGATAAAGGATGATATAGTTACATTC +
Preference number: 1 (lower is better)
Translates to: CPGLLLTSWLIPLII*FQVTSGIKDDIVTF
Trigger: GAATGTAACTATATCATCCTTTATCCCTGAGGTCACCTGGAATCAGATTATTAAGGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR CCA 90 bp TGCCTTTTTAAAAGATCTTCCCAAGCCCTCTACTCTGAAGTGCCCTaGGCTGCTATTGACGTCATGGCTTATTCCCTTAATAATCTGATT +
Preference number: 1 (lower is better)
Translates to: CLFKRSSQALYSEVP*AAIDVMAYSLNNLI
Trigger: AATCAGATTATTAAGGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGGGAAGATCTTTTAAAAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp AGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCACTGGTCTCGAACTCCTaGCCTCTGGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: SAGGRRHGHQANLGIHTALVSNS*PLVIHP
Trigger: TGGGTGGATCACCAGAGGTCAGGAGTTCGAGACCAG...TGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp AGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTAGCCTCAGGTGTAGCTaGGATTACAGGCGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: RAETEECWGQATWPPGQPSLRCS*DYRRVP
Trigger: TGGCACACGCCTGTAATCCCAGCTACACCTGAGGCT...AGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAAGCTGGTGGGAAAGCATaGGCTTCAGCTCCTGAACAG +
Preference number: 2 (lower is better)
Translates to: RHGHQANLGIHTAGQRGEAGGKA*ASAPEQ
Trigger: CTGTTCAGGAGCTGAAGCCCATGCTTTCCCACCAGC...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCCCTCTACTCTGAAGTaGCCTGGGCTGCTATTGACG +
Preference number: 2 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHPSTLK*PGLLLT
Trigger: CGTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGG...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAAGCATCATGGGAAGGATaGTTCATGTGTGGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: RHGHQANLGIHTAGQRGEASWEG*FMCGLC
Trigger: GCACAGCCCACACATGAACCATCCTTCCCATGATGC...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACTTCATGTGTGGGCTGTaGAAGGGACATTGCAGACGG +
Preference number: 2 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHFMCGL*KGHCRR
Trigger: CCGTCTGCAATGTCCCTTGCACAGCCCACACATGAA...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCAGCTGGTGGGAAAGCATaGGCTTCAGCTCCTGAACAG +
Preference number: 2 (lower is better)
Translates to: APEQHCSFKQAKRAQEKAAGGKA*ASAPEQ
Trigger: CTGTTCAGGAGCTGAAGCCCATGCTTTCCCACCAGC...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CAA 90 bp GGCATCATGGGAAGGATGGTTCATGTGTGGGCTGTGCAAGGGACATaGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGT +
Preference number: 2 (lower is better)
Translates to: GIMGRMVHVWAVQGT*QTEEATRELFLQRR
Trigger: ACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATGAACCATCCTTCCCATGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp AGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGATTCCCTTAATAATCTaGTTCCAGGTGACCTCAGGG +
Preference number: 2 (lower is better)
Translates to: RRHGHQANLGIHTAGQRGIPLII*FQVTSG
Trigger: CCCTGAGGTCACCTGGAATCAGATTATTAAGGGAAT...CCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp GTGGGCCTGACCAGAGAGAGAAGGCTGGAGAGGAAGTCGCCTCTTAGGGAAAGTGTCTCCCTTCCTCAGTaGGGTGTCAGTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: VGLTRERRLERKSPLRESVSLPQ*GVSLTL
Trigger: CAAAGTGAGACTGACACCTCACTGAGGAAGGGAGAC...ACTTTCCCTAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGGTCAGGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp AGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAAAGCATTAAGAAGTaGATCAATTCCCTGCTACTG +
Preference number: 2 (lower is better)
Translates to: SRDRGVLGAGDMATRPTWESIKK*INSLLL
Trigger: CAGTAGCAGGGAATTGATCCACTTCTTAATGCTTTC...CCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCTGGGGGCAGGCGACATaGCCACCAGGCCAACCTGGG +
Preference number: 2 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFWGQAT*PPGQPG
Trigger: CCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCA...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp TTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATGCAGCAGTCTCACTTTGCCTaGAGCACCTCTCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: LQTEEATRELFLQRRKMQQSHFA*STSQES
Trigger: GCTCTCCTGAGAGGTGCTGCAGGCAAAGTGAGACTG...CTGCATTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTCCGCTCCAGGGTCAGTaGCTCTACAGGGTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGPLQGQ*LYRVPR
Trigger: TCTGGGGACCCTGTAGAGTCACTGACCCTGGAGCGG...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATGAGACAGAGGAGTGCTaGGGGCAGGCGACATGGCCA +
Preference number: 2 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNETEEC*GQATWP
Trigger: TGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTC...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACGCTGGACTGGCATGTaGTACCTGACATTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: SMRHNLACNAIRQEAPKERWTGM*YLTFFQ
Trigger: CTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCG...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR TCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCCCGCTCCAGGGTCAGTaGCTCTACAGGGTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCPLQGQ*LYRVPR
Trigger: TCTGGGGACCCTGTAGAGTCACTGACCCTGGAGCGG...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp AGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGCCAGAACCTTGTCTTTaGAGACTGTGGTCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: SNWCLDEGDRRWTGMWYLPEPCL*RLWSLC
Trigger: ACACAGGGACCACAGTCTGCAAAGACAAGGTTCTGG...CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR-3UTR CCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAATACTCTGAAGTGCCCTaGGCTGCTATTGACGTCATG +
Preference number: 2 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEYSEVP*AAIDVM
Trigger: CATGACGTCAATAGCAGCCCAGGGCACTTCAGAGTA...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTTCAGCAGGAGCGGGATaGCAGAAGAGCGGCATCATG +
Preference number: 2 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGSAGAG*QKSGIM
Trigger: CATGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGA...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp CCATCTGTAGACGGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTAGGCATAACCTGGCCTaGAACGCCATAAGACAGGAG +
Preference number: 2 (lower is better)
Translates to: PSVDGGYFLLALSSSSLSRHNLA*NAIRQE
Trigger: CTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCT...AGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACCGTCTACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCGCCACCAGGCCAACCTaGGAATTCACACAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFATRPT*EFTQQD
Trigger: GTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGC...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGACCAAGCCCTCTACTCTaGAGTGCCCTGGGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRPSPLL*SALGCY
Trigger: ATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGG...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGATGGGCTTCAGCTCCTaGACAGGTGGAGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLMGFSS*TGGAPG
Trigger: CCCAGGGGCTCCACCTGTTCAGGAGCTGAAGCCCAT...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATAGGCTTTTCAAGACGTaGCATCCCTGCTCCATGGGC +
Preference number: 2 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNRLFKT*HPCSMG
Trigger: GCCCATGGAGCAGGGATGTCACGTCTTGAAAAGCCT...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp TGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGACATTCTTCTATTTGCTCTTCAGATaGACCACCCAGCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: CLDEGDRRWTGMWYLTFFYLLFR*TTQPAE
Trigger: TTCAGCTGGCTGGGTGGTTCATCTGAAGAGCAAATA...GAAGAATGTCAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR-3UTR GCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTGCTCACCACCATCTCTaGAGTGGGCCTGACCAGAGA +
Preference number: 2 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFAHHHL*SGPDQR
Trigger: TCTCTGGTCAGGCCCACTGCAGAGATGGTGGTGAGC...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATGGGGTTTTGCCATGTTaGCTGGGCTGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNGVLPC*LGWSRT
Trigger: AGTTCGAGACCAGCCCAGCCAACATGGCAAAACCCC...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACAAAACTTTGGAATCCTaGAGAATCCCTTTGTTCATT +
Preference number: 2 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHKTLES*RIPLFI
Trigger: AATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTT...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp GCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACTCTTGGCAACTTCTCCAGTTCTCTCCCTCCTGTaGAAAGCTAAGATGACTTCA +
Preference number: 2 (lower is better)
Translates to: ACNAIRQEAPKELLATSPVLSLL*KAKMTS
Trigger: TGAAGTCATCTTAGCTTTCCACAGGAGGGAGAGAAC...TGGAGAAGTTGCCAAGAGTTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTGGAGTGACATGCTGGTaGGAAAGCATGGGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSGVTCW*ESMGFS
Trigger: GCTGAAGCCCATGCTTTCCCACCAGCATGTCACTCC...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATGGAGTGACATGCTGGTaGGAAAGCATGGGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNGVTCW*ESMGFS
Trigger: GCTGAAGCCCATGCTTTCCCACCAGCATGTCACTCC...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTTGGGGGCAGGCGACATaGCCACCAGGCCAACCTGGG +
Preference number: 2 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSWGQAT*PPGQPG
Trigger: CCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCA...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp GCACTGGGTCATCTTCATCAATTACTGACCCATTCCACTTCCAGTAAGCAATGTAGGCATAACCTGGCCTaGAACGCCATAAGACAGGAG +
Preference number: 2 (lower is better)
Translates to: ALGHLHQLLTHSTSSKQCRHNLA*NAIRQE
Trigger: CTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCT...ACATTGCTTACTGGAAGTGGAATGGGTCAGTAATTGATGAAGATGACCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR TCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGTCAGCAGGAGCGGGATaGCAGAAGAGCGGCATCATG +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLSAGAG*QKSGIM
Trigger: CATGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGA...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGCTCTGCAAGTCAGCATaGGGCATAACCTGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLLCKSA*GITWPA
Trigger: TGCAGGCCAGGTTATGCCTCATGCTGACTTGCAGAG...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCCCTGGGCTGCTATTaGCGTCATGGCTTATTCCCT +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLALGCY*RHGLFP
Trigger: AGGGAATAAGCCATGACGTCAATAGCAGCCCAGGGC...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCGTCTCCCTTCCTCAGTaGGGTGTCAGTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFVSLPQ*GVSLTL
Trigger: CAAAGTGAGACTGACACCTCACTGAGGAAGGGAGAC...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAACTGCTATTGACGTCATaGCTTATTCCCTTAATAATC +
Preference number: 2 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKLLLTS*LIPLII
Trigger: GATTATTAAGGGAATAAGCCATGACGTCAATAGCAG...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCGCCATCTGTAGACGGTaGCTATTTCCTTCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCAICRR*LFPSCP
Trigger: AGGGCAAGAAGGAAATAGCCACCGTCTACAGATGGC...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGAGCCATCTGTAGACGGTaGCTATTTCCTTCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRAICRR*LFPSCP
Trigger: AGGGCAAGAAGGAAATAGCCACCGTCTACAGATGGC...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGACAGGGCAGGGAGGTaGTCTGGGAGTGACATGCTG +
Preference number: 2 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSDRAGR*SGSDML
Trigger: CAGCATGTCACTCCCAGACCACCTCCCTGCCCTGTC...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACAAGAGCATTATACATaGCTATTTGCTCTTCAGATG +
Preference number: 2 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEQEHYT*LFALQM
Trigger: CATCTGAAGAGCAAATAGCCATGTATAATGCTCTTG...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR CCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTACATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR CAA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTaGCACTTTTCTGTTTGGATCTTCCTCCACCCACGCTTATCCATT +
Preference number: 2 (lower is better)
Translates to: VFFLQNSTLGRWGIT*HFSVWIFLHPRLSI
Trigger: AATGGATAAGCGTGGGTGGAGGAAGATCCAAACAGAAAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGTAGAGATGGGGTTTTaGCATGTTGGCTGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLVEMGF*HVGWAG
Trigger: ACCAGCCCAGCCAACATGGCAAAACCCCATCTCTAC...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR GCA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTTTTGAGACGGAGTCTTaGTCTGTTGCCAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSFETES*SVARLE
Trigger: CTCTAGCCTGGCAACAGAGCAAGACTCCGTCTCAAA...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR GCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTAGGCGTGTGCCACCATaGCTAGCTCATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFRRVPP*LAHFCI
Trigger: AATACAAAAATGAGCTAGGCATGGTGGCACACGCCT...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR CCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGAAGAAGAGCGGCATCATaGGAAGGATGGTTCATGTGT +
Preference number: 2 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGRRAAS*EGWFMC
Trigger: ACACATGAACCATCCTTCCCATGATGCCGCTCTTCT...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCAGTTCGCTGTCTCCATaGCTTTTCTTGGCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFSSLSP*LFLAVQ
Trigger: TTGAACTGCCAAGAAAAGGCATGGAGACAGCGAACT...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTCTGTGCAAGGGACATTaGAGACGGAGGAAGCCACTA +
Preference number: 2 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSLCKGH*RRRKPL
Trigger: TAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAG...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp TTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTAGAGTAATACAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 2 (lower is better)
Translates to: LAGLTITGLVGLFSSRVIQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...TATTACTCTAGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
3UTR-3UTR CCA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGACTCCATGCCTTTTCTTaGCAGTTCAAACATTCAGAG +
Preference number: 2 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRLHAFS*QFKHSE
Trigger: CTCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAG...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCTATAGTTACATTCCATaGACTCTGCAAGTCAGCATG +
Preference number: 2 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCYSYIP*TLQVSM
Trigger: CATGCTGACTTGCAGAGTTCATGGAATGTAACTATA...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR TCA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTTGGAATTTGGTGTCTTaGATAAAAGCATTCCTAGAC +
Preference number: 2 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSWNLVS*IKAFLD
Trigger: GTCTAGGAATGCTTTTATTCAAGACACCAAATTCCA...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTTTCAAGCAATTCTCCTaGCTCAGCCTCAGGTGTAGC +
Preference number: 2 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSFKQFS*LSLRCS
Trigger: GCTACACCTGAGGCTGAGGCAGGAGAATTGCTTGAA...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR-3UTR GCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCTATGTTACATGTaGAAATTGCTCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCNLCYM*KLLLEG
Trigger: GCCTTCCAGGAGCAATTTGCACATGTAACATAGATT...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTATGGATACAGTATATATaGGTCATAGGTCTTTCCATC +
Preference number: 2 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLWIQYI*VIGLSI
Trigger: GATGGAAAGACCTATGACGCATATATACTGTATCCA...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR CCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGTTCTCTCCCTCCTGTaGAAAGCTAAGATGACTTCA +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLVLSLL*KAKMTS
Trigger: TGAAGTCATCTTAGCTTTCCACAGGAGGGAGAGAAC...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTACCAATCATGTGCTTCTaGAAATTAGTGACTGGATAT +
Preference number: 2 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLPIMCF*KLVTGY
Trigger: ATATCCAGTCACTAATTTCCAGAAGCACATGATTGG...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR CCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAAAACTTTGGAATCCTaGAGAATCCCTTTGTTCATT +
Preference number: 2 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCKTLES*RIPLFI
Trigger: AATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTT...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR TCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGTGTGGAAAGCTAAGATaGCTTCAAAACTTTGGAATC +
Preference number: 2 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLCGKLR*LQNFGI
Trigger: GATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACA...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR GCA 90 bp CTGGATATATTAACTGGATATATGCTGCATCTATACCATGTGTATTCTTGGCAACAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 2 (lower is better)
Translates to: LDILTGYMLHLYHVYSWQQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...TTGCCAAGAATACACATGGTATAGATGCAGCATATATCCAGTTAATATATCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR CCA 72 bp GTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTaGGAATTCACACAGCAGGACAGCGAGGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: VLGAGDMATRPT*EFTQQDSEGKL
Trigger: CAGCTTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 72 bp AGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATaGCCACCAGGCCAACCTGGGAATTCACACAGCAGG +
Preference number: 3 (lower is better)
Translates to: RAETEECWGQAT*PPGQPGNSHSR
Trigger: CCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR GCA 72 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTaGAGTGGGCCTGACCAGAGAGAGAAGGCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: GDQPPRCAHHHL*SGPDQREKAGE
Trigger: CTCTCCAGCCTTCTCTCTCTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACGGTGTCAGTCTCACTTaGCCTGCAGCACCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHGVSLT*PAAPLR
Trigger: CCTGAGAGGTGCTGCAGGCAAAGTGAGACTGACACC...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR GCA 72 bp GCGGCATCATGGGAAGGATGGTTCATGTGTGGGCTGTaGAAGGGACATTGCAGACGGAGGAAGCCACTAGGG +
Preference number: 3 (lower is better)
Translates to: AASWEGWFMCGL*KGHCRRRKPLG
Trigger: CCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATGAACCATCCTTCCCATGATGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 72 bp AAGCATGGGCTTCAGCTCCTGAACAGGTGGAGCCCCTaGGAGGTGTTTCAGCAGGAGCGGGATGACAGAAGA +
Preference number: 3 (lower is better)
Translates to: KHGLQLLNRWSP*EVFQQERDDRR
Trigger: TCTTCTGTCATCCCGCTCCTGCTGAAACACCTCCCAGGGGCTCCACCTGTTCAGGAGCTGAAGCCCATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCATGCCCTGGGCTGCTATaGACGTCATGGCTTATTCCC +
Preference number: 3 (lower is better)
Translates to: APEQHCSFKQAKRAQEKACPGLL*TSWLIP
Trigger: GGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCA...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR CCA 72 bp GAGCGGGATGACAGAAGAGCGGCATCATGGGAAGGATaGTTCATGTGTGGGCTGTGCAAGGGACATTGCAGA +
Preference number: 3 (lower is better)
Translates to: ERDDRRAASWEG*FMCGLCKGHCR
Trigger: TCTGCAATGTCCCTTGCACAGCCCACACATGAACCATCCTTCCCATGATGCCGCTCTTCTGTCATCCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 72 bp CTCTTGGCAACTTCTCCATGCTACCCGAGAGGCACGTaGGCCTCTCTTTGCAGTTTCTCCTTAGTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: LLATSPCYPRGT*ASLCSFSLVAG
Trigger: ACCAGCCACTAAGGAGAAACTGCAAAGAGAGGCTCACGTGCCTCTCGGGTAGCATGGAGAAGTTGCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR CAA 90 bp AGAACTCTTGGCAACTTCTCCATGCTACCCGAGAGGCACGTGAGCCTCTCTTTGCACGTGAGCCTCTCTTaGCAGTTTCTCCTTAGTGGC +
Preference number: 3 (lower is better)
Translates to: RTLGNFSMLPERHVSLSLHVSLS*QFLLSG
Trigger: GCCACTAAGGAGAAACTGCAAAGAGAGGCTCACGTG...CAAAGAGAGGCTCACGTGCCTCTCGGGTAGCATGGAGAAGTTGCCAAGAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR CAA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTTGGGGTTTTGCCATGTaGGCTGGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGWGFAM*AGLVSN
Trigger: GTTCGAGACCAGCCCAGCCAACATGGCAAAACCCCA...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR TCA 72 bp TGGAAAGTTCTCCAAGAATATGTCTCCCTTCCTCAGTaGGGTGTCAGTCTCACTTTGCCTGCAGCACCTCTC +
Preference number: 3 (lower is better)
Translates to: WKVLQEYVSLPQ*GVSLTLPAAPL
Trigger: GAGAGGTGCTGCAGGCAAAGTGAGACTGACACCTCACTGAGGAAGGGAGACATATTCTTGGAGAACTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 72 bp TGTCTTTGCAGACTGTGGTCCCTGTGTAAAGTCCCCTaGCCAGCGGATAGCCCCATGTTTCTGCTTAATGAA +
Preference number: 3 (lower is better)
Translates to: CLCRLWSLCKVP*PADSPMFLLNE
Trigger: TTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACAGGGACCACAGTCTGCAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR CCA 72 bp GACAGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTaGACTGGCATGTGGTACCTGACATTCTTCCAGAAC +
Preference number: 3 (lower is better)
Translates to: DSNWCLDEGDRR*TGMWYLTFFQN
Trigger: GTTCTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
3UTR-3UTR CAA 90 bp AGAACTCTTGGCAACTTCTCCATGCTACCCGAGAGGCACGTGAGCCTCTCTTTGCATTTTCTCATAGTCTaGGATTTTCTCCAGCTCAAG +
Preference number: 3 (lower is better)
Translates to: RTLGNFSMLPERHVSLSLHFLIV*DFLQLK
Trigger: CTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATG...CAAAGAGAGGCTCACGTGCCTCTCGGGTAGCATGGAGAAGTTGCCAAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR GCA 72 bp TTTTTAAAAGATCTTCCCAAGCCCTCTACTCTGAAGTaGCCTGGGCTGCTATTGACGTCATGGCTTATTCCC +
Preference number: 3 (lower is better)
Translates to: FLKDLPKPSTLK*PGLLLTSWLIP
Trigger: GGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGGGAAGATCTTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR GCA 72 bp TTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTCCATaGCTTTTCTTGGCAGTTCAAACATTCAGAGAGGGC +
Preference number: 3 (lower is better)
Translates to: FLLALSSSSLSP*LFLAVQTFREG
Trigger: GCCCTCTCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAGACAGCGAACTAGAAGAAAGGGCAAGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CCA 72 bp AAAAGATCTTCCCAAGCCCTCTACTCTGAAGTGCCCTaGGCTGCTATTGACGTCATGGCTTATTCCCTTAAT +
Preference number: 3 (lower is better)
Translates to: KRSSQALYSEVP*AAIDVMAYSLN
Trigger: ATTAAGGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGGGAAGATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR TCA 72 bp TTCTGTTTGGATCTTCCTCCACCCACGCTTATCCATTaGTTCTTGTCCCTCCTTAAATTCCAGCTGCCATTC +
Preference number: 3 (lower is better)
Translates to: FCLDLPPPTLIH*FLSLLKFQLPF
Trigger: GAATGGCAGCTGGAATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 72 bp TCCACTTCCAGTAAGCAATGTCACTCAACTGGCCGGTaGCATTACAGATCAATTGTATCTGGGATCCCAAGT +
Preference number: 3 (lower is better)
Translates to: STSSKQCHSTGR*HYRSIVSGIPS
Trigger: ACTTGGGATCCCAGATACAATTGATCTGTAATGTCACCGGCCAGTTGAGTGACATTGCTTACTGGAAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR GCA 72 bp AAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATaGAGGATAATAACAAAGGACAGGATGGTCATGCCA +
Preference number: 3 (lower is better)
Translates to: KPLGSCSSKDVK*RIITKDRMVMP
Trigger: TGGCATGACCATCCTGTCCTTTGTTATTATCCTGCATTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp GTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCTTAAGAGACAGTCTCTaGTTCTGTTGCTCACACTGG +
Preference number: 3 (lower is better)
Translates to: VKSPDQRIAPCFCLMNLILRDSL*FCCSHW
Trigger: CCAGTGTGAGCAACAGAACAAGAGACTGTCTCTTAA...GATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
3UTR-3UTR CAA 90 bp TTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 3 (lower is better)
Translates to: LYLGSQVYFHCLISWAHNPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...ATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
3UTR-3UTR CAA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTTCTCCATGCCTTTTCTaGGCAGTTCAAACATTCAGA +
Preference number: 3 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSSPCLF*AVQTFR
Trigger: TCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAGA...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTTCCTGGAGAATCCCTTaGTTCATTGAAGTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSSWRIP*FIEVSF
Trigger: AAAACTCACTTCAATGAACAAAGGGATTCTCCAGGA...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTCCAGAGACTGTGGAATaGGAGGATGTTCTGAATTTT +
Preference number: 3 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSPETVE*EDVLNF
Trigger: AAAATTCAGAACATCCTCCAATTCCACAGTCTCTGG...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR TCA 72 bp CTGCTATTGACGTCATGGCTTATTCCCTTAATAATCTaGTTCCAGGTGACCTCAGGGATAAAGGATGATATA +
Preference number: 3 (lower is better)
Translates to: LLLTSWLIPLII*FQVTSGIKDDI
Trigger: TATATCATCCTTTATCCCTGAGGTCACCTGGAATCAGATTATTAAGGGAATAAGCCATGACGTCAATAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR GCA 72 bp TTATCCATTGATTCTTGTCCCTCCTTAAATTCCAGCTaGCATTCTACTTGTAATTCTTGGTCATCATCACCC +
Preference number: 3 (lower is better)
Translates to: LSIDSCPSLNSS*HSTCNSWSSSP
Trigger: GGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATTTAAGGAGGGACAAGAATCAATGGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGTCTCCATGCCTTTTCTaGGCAGTTCAAACATTCAGA +
Preference number: 3 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLSPCLF*AVQTFR
Trigger: TCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAGA...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR-3UTR CAA 90 bp GTGACTGGATATATTAACTGGATATATGCTGCATCTATACCATGTGTATTCTTGCCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 3 (lower is better)
Translates to: VTGYINWIYAASIPCVFLPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...CAAGAATACACATGGTATAGATGCAGCATATATCCAGTTAATATATCCAGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR-3UTR CAA 90 bp GTGACTGGATATATTAACTGGATATATGCTGCATCTATACCATGTGTATTCTTGGACATTACAGATCAATaGTATCTGGGATCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: VTGYINWIYAASIPCVFLDITDQ*YLGSQV
Trigger: GACTTGGGATCCCAGATACAATTGATCTGTAATGTC...CAAGAATACACATGGTATAGATGCAGCATATATCCAGTTAATATATCCAGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR CCA 72 bp ATGTGCTTCTGGAAATTAGTGACTGGATATATTAACTaGATATATGCTGCATCTATACCATGTGTATTCTTG +
Preference number: 3 (lower is better)
Translates to: MCFWKLVTGYIN*IYAASIPCVFL
Trigger: CAAGAATACACATGGTATAGATGCAGCATATATCCAGTTAATATATCCAGTCACTAATTTCCAGAAGCACAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
3UTR CCA 72 bp ACTGTCAACGTGACACATATACCAATCATGTGCTTCTaGAAATTAGTGACTGGATATATTAACTGGATATAT +
Preference number: 3 (lower is better)
Translates to: TVNVTHIPIMCF*KLVTGYINWIY
Trigger: ATATATCCAGTTAATATATCCAGTCACTAATTTCCAGAAGCACATGATTGGTATATGTGTCACGTTGACAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp GGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGGACGGCCGTGGAGGGTaGTGGGATCCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GGRRHGHQANLGIHTAGQDGRGG*WDPSPG
Trigger: CCCGGGGCTGGGATCCCATCACCCTCCACGGCCGTC...CTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp AGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGTGGGGGCAGGCGACATaGCCACCAGGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: SRDRGVLGAGDMATRPTWWGQAT*PPGQPG
Trigger: CCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCA...CCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTCCGCTCCAGGGTCAGTaGCTCTACAGGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RAETEECWGQATWPPGQPPLQGQ*LYRVPR
Trigger: TCTGGGGACCCTGTAGAGTCACTGACCCTGGAGCGG...AGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCAGAGCCGAGCGAGGAGTaGTTCGGTGCGCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: APEQHCSFKQAKRAQEKAEPSEE*FGARAR
Trigger: GCGCGCCCGCGCACCGAAGCACTCCTCGCTCGGCTC...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp AGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGAGACAGAGGAGTGCTaGGGGCAGGCGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: RAETEECWGQATWPPGQPETEEC*GQATWP
Trigger: TGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTC...AGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAACGAGGAGTGCTTCGGTaGGCGGGCGCGCGATTGTCA +
Preference number: 4 (lower is better)
Translates to: RHGHQANLGIHTAGQRGERGVLR*AGARLS
Trigger: TGACAATCGCGCGCCCGCGCACCGAAGCACTCCTCG...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAACCGCTCCAGGGTCAGTaGCTCTACAGGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RHGHQANLGIHTAGQRGEPLQGQ*LYRVPR
Trigger: TCTGGGGACCCTGTAGAGTCACTGACCCTGGAGCGG...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGCTCTGCAAGTCAGCATaGGGCATAACCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRDRGVLGAGDMATRPTWLCKSA*GITWPA
Trigger: TGCAGGCCAGGTTATGCCTCATGCTGACTTGCAGAG...CCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp AGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGCAGTCTCACTTTGCCTaGAGCACCTCTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SRDRGVLGAGDMATRPTWQSHFA*STSQES
Trigger: GCTCTCCTGAGAGGTGCTGCAGGCAAAGTGAGACTG...CCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCGATTGTCACATTCCTaGCGCTCCCTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHRLSHS*RSLGRA
Trigger: CGCGCGCCCCAGGGAGCGGCAGGAATGTGACAATCG...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGGACAGGGCAGGGAGGTaGTCTGGGAGTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQDRAGR*SGSDML
Trigger: CAGCATGTCACTCCCAGACCACCTCCCTGCCCTGTC...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGTCTCCCTTCCTCAGTaGGGTGTCAGTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SRDRGVLGAGDMATRPTWVSLPQ*GVSLTL
Trigger: CAAAGTGAGACTGACACCTCACTGAGGAAGGGAGAC...CCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGTCAGCAGGAGCGGGATaGCAGAAGAGCGGCATCATG +
Preference number: 4 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQSAGAG*QKSGIM
Trigger: CATGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGA...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TTTGCCTGCAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACAGGGTCTCTGCAGTGGGCCTaGCCAGAGAGAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FACSTSQESRSRVSDSTGSLQWA*PEREGW
Trigger: CCAGCCTTCTCTCTCTGGTCAGGCCCACTGCAGAGA...CCCTGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TTTGCCTGCAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACAGGGAACAGGTGGAGCCCCTaGGAGGTGTTTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FACSTSQESRSRVSDSTGNRWSP*EVFQQE
Trigger: CTCCTGCTGAAACACCTCCCAGGGGCTCCACCTGTT...CCCTGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCTCAGCAGGAGCGGGATaGCAGAAGAGCGGCATCATG +
Preference number: 4 (lower is better)
Translates to: SESSNSSWRETSLPDVLTSAGAG*QKSGIM
Trigger: CATGATGCCGCTCTTCTGTCATCCCGCTCCTGCTGA...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAAAGGCTTTTCAAGACGTaGCATCCCTGCTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: RHGHQANLGIHTAGQRGERLFKT*HPCSMG
Trigger: GCCCATGGAGCAGGGATGTCACGTCTTGAAAAGCCT...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCCTGGTCTCGAACTCCTaGCCTCTGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: SESSNSSWRETSLPDVLTLVSNS*PLVIHP
Trigger: TGGGTGGATCACCAGAGGTCAGGAGTTCGAGACCAG...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGAGGCATAACCTGGCCTaGAACGCCATAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQRHNLA*NAIRQE
Trigger: CTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCT...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp AGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGCCATCTGTAGACGGTaGCTATTTCCTTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RAETEECWGQATWPPGQPAICRR*LFPSCP
Trigger: AGGGCAAGAAGGAAATAGCCACCGTCTACAGATGGC...AGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGCTAGGCCCTGTCTGTTaGAACAGCAGCTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: RRHGHQANLGIHTAGQRGLGPVC*NSSSRT
Trigger: TGTTCTGGAGCTGCTGTTCCAACAGACAGGGCCTAG...CCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACGGAGTGACATGCTGGTaGGAAAGCATGGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHGVTCW*ESMGFS
Trigger: GCTGAAGCCCATGCTTTCCCACCAGCATGTCACTCC...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CATGTGTGGGCTGTGCAAGGGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGCTGGGAGTGACATGCTaGTGGGAAAGCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HVWAVQGTLQTEEATRELLGVTC*WESMGF
Trigger: GAAGCCCATGCTTTCCCACCAGCATGTCACTCCCAG...CAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCAGCCACCAGGCCAACCTaGGAATTCACACAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: APEQHCSFKQAKRAQEKAATRPT*EFTQQD
Trigger: GTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGC...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TTTGCCTGCAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACAGGGCCAGAGAGAGAAGGCTaGAGAGGAAGTCGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: FACSTSQESRSRVSDSTGPEREG*RGSRLL
Trigger: TAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGG...CCCTGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TTTGCCTGCAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACAGGGCTAGGCCCTGTCTGTTaGAACAGCAGCTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: FACSTSQESRSRVSDSTGLGPVC*NSSSRT
Trigger: TGTTCTGGAGCTGCTGTTCCAACAGACAGGGCCTAG...CCCTGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCGTCTCCCTTCCTCAGTaGGGTGTCAGTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SESSNSSWRETSLPDVLTVSLPQ*GVSLTL
Trigger: CAAAGTGAGACTGACACCTCACTGAGGAAGGGAGAC...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAAATGGGCTTCAGCTCCTaGACAGGTGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKMGFSS*TGGAPG
Trigger: CCCAGGGGCTCCACCTGTTCAGGAGCTGAAGCCCAT...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GTGGGCCTGACCAGAGAGAGAAGGCTGGAGAGGAAGTCGCCTCTTAGGGAAAGTAGGCTTTTCAAGACGTaGCATCCCTGCTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: VGLTRERRLERKSPLRESRLFKT*HPCSMG
Trigger: GCCCATGGAGCAGGGATGTCACGTCTTGAAAAGCCT...ACTTTCCCTAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGGTCAGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCCCACGCTTATCCATTaGTTCTTGTCCCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: GGRRHGHQANLGIHTAGQPTLIH*FLSLLK
Trigger: TTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGG...CTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCCTGTGCAAGGGACATTaGAGACGGAGGAAGCCACTA +
Preference number: 4 (lower is better)
Translates to: SESSNSSWRETSLPDVLTLCKGH*RRRKPL
Trigger: TAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAG...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGCATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCGCATCATGGGAAGGATaGTTCATGTGTGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SESSNSSWRETSLPDVLTASWEG*FMCGLC
Trigger: GCACAGCCCACACATGAACCATCCTTCCCATGATGC...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGGGACCGTTATTGACCTaGAATCAAGTACTCAGAACA +
Preference number: 4 (lower is better)
Translates to: GGRRHGHQANLGIHTAGQGPLLT*NQVLRT
Trigger: TGTTCTGAGTACTTGATTTCAGGTCAATAACGGTCC...CTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGCTGGTGACAGTAACTaGTGTTTAGATGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RRHGHQANLGIHTAGQRGAGDSN*CLDEGD
Trigger: GTCACCTTCATCTAAACACCAGTTACTGTCACCAGC...CCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp GGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGTATAGTTACATTCCATaGACTCTGCAAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: GGRRHGHQANLGIHTAGQYSYIP*TLQVSM
Trigger: CATGCTGACTTGCAGAGTTCATGGAATGTAACTATA...CTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp AGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGACTGTGCTTGTGTCCTaGAATCGGTGGCATATAAAT +
Preference number: 4 (lower is better)
Translates to: RRHGHQANLGIHTAGQRGTVLVS*NRWHIN
Trigger: ATTTATATGCCACCGATTGCAGGACACAAGCACAGT...CCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAAACCATCTTCAGAGGGTaGGTCTACCTGGACGGACGG +
Preference number: 4 (lower is better)
Translates to: SMRHNLACNAIRQEAPKETIFRG*VYLDGR
Trigger: CCGTCCGTCCAGGTAGACGCACCCTCTGAAGATGGT...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp TTTGCCTGCAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACAGGGGGCTGGGGATGTGTATaGAAAATACAAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: FACSTSQESRSRVSDSTGGWGCV*KIQADG
Trigger: TCCATCTGCTTGTATTTTCCATACACATCCCCAGCC...CCCTGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCATGTGCAAATTGCTCCTaGAAGGCAGTGAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: APEQHCSFKQAKRAQEKACANCS*KAVRDR
Trigger: TCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACA...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGGTGTCCTGCAATCGGTaGCATATAAATTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQVSCNR*HINLAF
Trigger: GAAAGCCAAATTTATATGCCACCGATTGCAGGACAC...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCATCTACTTGTAATTCTTaGTCATCATCACCCCCACTC +
Preference number: 4 (lower is better)
Translates to: SAGGRRHGHQANLGIHTASTCNS*SSSPPL
Trigger: GAGTGGGGGTGATGATGACCAAGAATTACAAGTAGA...TGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCATACTCTGAAGTGCCCTaGGCTGCTATTGACGTCATG +
Preference number: 4 (lower is better)
Translates to: APEQHCSFKQAKRAQEKAYSEVP*AAIDVM
Trigger: CATGACGTCAATAGCAGCCCAGGGCACTTCAGAGTA...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp GCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACTCTTGGCAACTTCTCCATACCCGAGAGGCACGTaGGCCTCTCTTTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ACNAIRQEAPKELLATSPYPRGT*ASLCSF
Trigger: GAAACTGCAAAGAGAGGCTCACGTGCCTCTCGGGTA...TGGAGAAGTTGCCAAGAGTTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410023.6
ENST00000413623.5
CDS-3UTR TCA 90 bp GTGGGCCTGACCAGAGAGAGAAGGCTGGAGAGGAAGTCGCCTCTTAGGGAAAGTAGTCTGTGTGTCAAATaGAAGCTAGGCCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VGLTRERRLERKSPLRESSLCVK*KLGPVC
Trigger: ACAGACAGGGCCTAGCTTTCATTTGACACACAGACT...ACTTTCCCTAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGGTCAGGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGATAAGTACAGTCTATTaGTCCGTGATGCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: RRHGHQANLGIHTAGQRGISTVY*SVMHAV
Trigger: TACAGCATGCATCACGGATCAATAGACTGTACTTAT...CCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTGACGGCCGTGGAGGGTaGTGGGATCCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFDGRGG*WDPSPG
Trigger: CCCGGGGCTGGGATCCCATCACCCTCCACGGCCGTC...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR GCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCAGTTAATTCAGGTCTGTaGCGCAGCAGAGTGACAACT +
Preference number: 4 (lower is better)
Translates to: APEQHCSFKQAKRAQEKAVNSGL*RSRVTT
Trigger: AGTTGTCACTCTGCTGCGGCACAGACCTGAATTAAC...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR GCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAAGCAACGGGTAGTTTCTaGTTAAATATGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RHGHQANLGIHTAGQRGEATGSF*LNMACA
Trigger: TGCACAAGCCATATTTAAGCAGAAACTACCCGTTGC...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGAATCTATGTTACATGTaGAAATTGCTCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQNLCYM*KLLLEG
Trigger: GCCTTCCAGGAGCAATTTGCACATGTAACATAGATT...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATGAGCCGAGCGAGGAGTaGTTCGGTGCGCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHEPSEE*FGARAR
Trigger: GCGCGCCCGCGCACCGAAGCACTCCTCGCTCGGCTC...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR CCA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCGTTCTCTCCCTCCTGTaGAAAGCTAAGATGACTTCA +
Preference number: 4 (lower is better)
Translates to: SESSNSSWRETSLPDVLTVLSLL*KAKMTS
Trigger: TGAAGTCATCTTAGCTTTCCACAGGAGGGAGAGAAC...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACGTTCTCTCCCTCCTGTaGAAAGCTAAGATGACTTCA +
Preference number: 4 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHVLSLL*KAKMTS
Trigger: TGAAGTCATCTTAGCTTTCCACAGGAGGGAGAGAAC...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CCATCTGTAGACGGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTGACAGGGCAGGGAGGTaGTCTGGGAGTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: PSVDGGYFLLALSSSSLSDRAGR*SGSDML
Trigger: CAGCATGTCACTCCCAGACCACCTCCCTGCCCTGTC...AGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACCGTCTACAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAAGACATCCCTGCTCCATaGGCTTCTGGCTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKDIPAP*ASGCSL
Trigger: CAGACTACAGCCAGAAGCCCATGGAGCAGGGATGTC...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAAGACATCCCTGCTCCATaGGCTTCTGGCTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEDIPAP*ASGCSL
Trigger: CAGACTACAGCCAGAAGCCCATGGAGCAGGGATGTC...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp TTTAAAAGATCTTCCCAAGCCCTCTACTCTGAAGTGCCCTGGGCTGCTATTGACCTGTGTAAAGTCCCCTaGCCAGCGGATAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: FKRSSQALYSEVPWAAIDLCKVP*PADSPM
Trigger: CATGGGGCTATCCGCTGGTCAGGGGACTTTACACAG...GTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGGGAAGATCTTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAATTATACATGGCTATTTaGTCTTCAGATGAACCACCC +
Preference number: 4 (lower is better)
Translates to: RHGHQANLGIHTAGQRGELYMAI*SSDEPP
Trigger: GGGTGGTTCATCTGAAGAGCAAATAGCCATGTATAA...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp AGAACTCTTGGCAACTTCTCCATGCTACCCGAGAGGCACGTGAGCCTCTCTTTGTGTCTTTGCAGACTGTaGTCCCTGTGTAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RTLGNFSMLPERHVSLSLCLCRL*SLCKVP
Trigger: GGGGACTTTACACAGGGACCACAGTCTGCAAAGACA...CAAAGAGAGGCTCACGTGCCTCTCGGGTAGCATGGAGAAGTTGCCAAGAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp GTGGGCCTGACCAGAGAGAGAAGGCTGGAGAGGAAGTCGCCTCTTAGGGAAAGTCACCTAAAGAACTCTTaGCAACTTCTCCATGCTACC +
Preference number: 4 (lower is better)
Translates to: VGLTRERRLERKSPLRESHLKNS*QLLHAT
Trigger: GGTAGCATGGAGAAGTTGCCAAGAGTTCTTTAGGTG...ACTTTCCCTAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGGTCAGGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGCCGGACGCCCCAGCTaGTACGGAGGCTCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGAGRPS*YGGSKE
Trigger: TTCCTTTGAGCCTCCGTACCAGCTGGGGCGTCCGGC...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAACCAGAGAGAGAAGGCTaGAGAGGAAGTCGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKPEREG*RGSRLL
Trigger: TAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGG...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAATCAACCCTTGGAAGATaGGGAATAACTTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: RHGHQANLGIHTAGQRGESTLGR*GITLHF
Trigger: AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGA...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTATGGGCTTCAGCTCCTaGACAGGTGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLMGFSS*TGGAPG
Trigger: CCCAGGGGCTCCACCTGTTCAGGAGCTGAAGCCCAT...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GTGGGCCTGACCAGAGAGAGAAGGCTGGAGAGGAAGTCGCCTCTTAGGGAAAGTGGACCGTTATTGACCTaGAATCAAGTACTCAGAACA +
Preference number: 4 (lower is better)
Translates to: VGLTRERRLERKSPLRESGPLLT*NQVLRT
Trigger: TGTTCTGAGTACTTGATTTCAGGTCAATAACGGTCC...ACTTTCCCTAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGGTCAGGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGCTCCCAGGGTTGTACTaGGATAAAAGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SNWCLDEGDRRWTGMWYLLPGLY*DKRHEP
Trigger: TGGCTCATGCCTTTTATCTCAGTACAACCCTGGGAG...CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR GCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACCAGAACCTTGTCTTTaGAGACTGTGGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEPEPCL*RLWSLC
Trigger: ACACAGGGACCACAGTCTGCAAAGACAAGGTTCTGG...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410023.6
ENST00000413623.5
CDS-3UTR CCA 90 bp ATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTGAAGGTGACCGTCGCTaGACTGGCATGTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: IVSLAGLTITGLVGLFSSEGDRR*TGMWYL
Trigger: CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTC...AGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACTCAACCCTTGGAAGATaGGGAATAACTTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHSTLGR*GITLHF
Trigger: AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGA...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTGAGGGTGCGTCTACCTaGACGGACGGCCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFEGAST*TDGRGG
Trigger: CCCTCCACGGCCGTCCGTCCAGGTAGACGCACCCTC...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR CCA 90 bp TTTGCCTGCAGCACCTCTCAGGAGAGCCGCTCCAGGGTCAGTGACTCTACAGGGCTGCTATTGACGTCATaGCTTATTCCCTTAATAATC +
Preference number: 4 (lower is better)
Translates to: FACSTSQESRSRVSDSTGLLLTS*LIPLII
Trigger: GATTATTAAGGGAATAAGCCATGACGTCAATAGCAG...CCCTGTAGAGTCACTGACCCTGGAGCGGCTCTCCTGAGAGGTGCTGCAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp TTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCTGTGTAAAGTCCCCTaGCCAGCGGATAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: LYLGSQVYFHCLISWAHNLCKVP*PADSPM
Trigger: CATGGGGCTATCCGCTGGTCAGGGGACTTTACACAG...ATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATTGTGCCGCAGCAGAGTaGCAACTCACATCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNCAAAE*QLTSCR
Trigger: CCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACA...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR TCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTTCTCTGCAGTGGGCCTaGCCAGAGAGAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFSLQWA*PEREGW
Trigger: CCAGCCTTCTCTCTCTGGTCAGGCCCACTGCAGAGA...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CTCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACTGGATACAGTATATATaGGTCATAGGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LREQQFQLEGDQPPRCAHWIQYI*VIGLSI
Trigger: GATGGAAAGACCTATGACGCATATATACTGTATCCA...GTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATGGTCTGGGAGTGACATaGTGGTGGGAAAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNGLGVT*WWESMG
Trigger: GCCCATGCTTTCCCACCAGCATGTCACTCCCAGACC...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATCGATTGTCACATTCCTaGCGCTCCCTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHRLSHS*RSLGRA
Trigger: CGCGCGCCCCAGGGAGCGGCAGGAATGTGACAATCG...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR GCA 90 bp TTTAAAAGATCTTCCCAAGCCCTCTACTCTGAAGTGCCCTGGGCTGCTATTGACGTAGAGATGGGGTTTTaGCATGTTGGCTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FKRSSQALYSEVPWAAIDVEMGF*HVGWAG
Trigger: ACCAGCCCAGCCAACATGGCAAAACCCCATCTCTAC...GTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGGGAAGATCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAAGCAATGTCACTCAACTaGCCGGTGACATTACAGATC +
Preference number: 4 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEAMSLN*PVTLQI
Trigger: GATCTGTAATGTCACCGGCCAGTTGAGTGACATTGC...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410023.6
ENST00000413623.5
CDS-3UTR CCA 90 bp CCATCTGTAGACGGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTCGCTGGACTGGCATGTaGTACCTGACATTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PSVDGGYFLLALSSSSLSRWTGM*YLTFFQ
Trigger: CTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCG...AGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACCGTCTACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp CATTCTCTCCTGAACCAAAGCCACACAAGGCTTTTCACAACCGTATGGCTCCTACGCTGGACTGGCATGTaGTACCTGACATTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HSLLNQSHTRLFTTVWLLRWTGM*YLTFFQ
Trigger: CTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCG...TAGGAGCCATACGGTTGTGAAAAGCCTTGTGTGGCTTTGGTTCAGGAGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CCA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTGAAGGTGACCGTCGCTaGACTGGCATGTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSEGDRR*TGMWYL
Trigger: CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTC...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGGGGCATTTGGGAATaGCTGGCCTCCCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLWGIWE*LASQEV
Trigger: CACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCA...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CCA 90 bp TTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATGCAGAGAAGAGCGGCATCATaGGAAGGATGGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: LQTEEATRELFLQRRKMQRRAAS*EGWFMC
Trigger: ACACATGAACCATCCTTCCCATGATGCCGCTCTTCT...CTGCATTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTAACAGGTGGAGCCCCTaGGAGGTGTTTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGNRWSP*EVFQQE
Trigger: CTCCTGCTGAAACACCTCCCAGGGGCTCCACCTGTT...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCTGGACGGACGGCCGTaGAGGGTGATGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFLDGRP*RVMGSQ
Trigger: CTGGGATCCCATCACCCTCCACGGCCGTCCGTCCAG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR CCA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGGAGGGTGCGTCTACCTaGACGGACGGCCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLEGAST*TDGRGG
Trigger: CCCTCCACGGCCGTCCGTCCAGGTAGACGCACCCTC...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp TTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATGCAGAGTTCGCTGTCTCCATaGCTTTTCTTGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQTEEATRELFLQRRKMQSSLSP*LFLAVQ
Trigger: TTGAACTGCCAAGAAAAGGCATGGAGACAGCGAACT...CTGCATTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTCAGTCTCACTTTGCCTaGAGCACCTCTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGQSHFA*STSQES
Trigger: GCTCTCCTGAGAGGTGCTGCAGGCAAAGTGAGACTG...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCGGTCTGGGAGTGACATaGTGGTGGGAAAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCGLGVT*WWESMG
Trigger: GCCCATGCTTTCCCACCAGCATGTCACTCCCAGACC...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTCCAGCCTCCCAGATGTaGTCACCACCATCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLPASQM*SPPSLQ
Trigger: CTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGG...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACGAGGAGTGCTTCGGTaGGCGGGCGCGCGATTGTCA +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPRGVLR*AGARLS
Trigger: TGACAATCGCGCGCCCGCGCACCGAAGCACTCCTCG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR CCA 90 bp CATGTGTGGGCTGTGCAAGGGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGCTTTCATATTCTTCTTaGAGAAGGCCTTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: HVWAVQGTLQTEEATRELLSYSS*RRPCLL
Trigger: TAAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAG...CAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TACTTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTCGCTGGACTGGCATGTaGTACCTGACATTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: YFHCLISWAHNHRPCGFVRWTGM*YLTFFQ
Trigger: CTGGAAGAATGTCAGGTACCACATGCCAGTCCAGCG...AACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAGCCGGACGCCCCAGCTaGTACGGAGGCTCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NCETYTPMPRSSRKMESTAGRPS*YGGSKE
Trigger: TTCCTTTGAGCCTCCGTACCAGCTGGGGCGTCCGGC...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CCA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGCTGGACGGACGGCCGTaGAGGGTGATGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLLDGRP*RVMGSQ
Trigger: CTGGGATCCCATCACCCTCCACGGCCGTCCGTCCAG...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp GGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTAGAGTAATAAATTCTTACCCGAGAGGCACGTaGGCCTCTCTTTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GLTITGLVGLFSSRVINSYPRGT*ASLCSF
Trigger: GAAACTGCAAAGAGAGGCTCACGTGCCTCTCGGGTA...AGAATTTATTACTCTAGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACAGTCTATTGATCCGTaGTGCATGCTGTACATGAAT +
Preference number: 4 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEQSIDP*CMLYMN
Trigger: ATTCATGTACAGCATGCATCACGGATCAATAGACTG...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCCCAAGCCCTCTACTCTaGAGTGCCCTGGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFPSPLL*SALGCY
Trigger: ATAGCAGCCCAGGGCACTTCAGAGTAGAGGGCTTGG...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTATTGACTCAAGCAGCTTaGGAAGGAGCCTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLLTQAA*EGALAV
Trigger: GACTGCCAAGGCTCCTTCTCAAGCTGCTTGAGTCAA...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR GCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATTTCTTCACGTTCCTTaGATTTATCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKFLHVP*IYQPPE
Trigger: CTCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAA...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AATTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAAGGCATAACCTGGCCTaGAACGCCATAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: NCIWDPKSTSIVSLAGLTRHNLA*NAIRQE
Trigger: CTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCT...TGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp GCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCGGGCCCAGGAGAAAGCATCCAAAGACGTAAAATaGAGGATAATAACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: APEQHCSFKQAKRAQEKASKDVK*RIITKD
Trigger: GTCCTTTGTTATTATCCTGCATTTTACGTCTTTGGA...TGCTTTCTCCTGGGCCCGCTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCTTCATGTGTGGGCTGTaGAAGGGACATTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFFMCGL*KGHCRR
Trigger: CCGTCTGCAATGTCCCTTGCACAGCCCACACATGAA...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCGCTCACCACCATCTCTaGAGTGGGCCTGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFAHHHL*SGPDQR
Trigger: TCTCTGGTCAGGCCCACTGCAGAGATGGTGGTGAGC...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACCAGCCTCCCAGATGTaGTCACCACCATCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGPASQM*SPPSLQ
Trigger: CTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGG...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTCCCTCTACTCTGAAGTaGCCTGGGCTGCTATTGACG +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLPSTLK*PGLLLT
Trigger: CGTCAATAGCAGCCCAGGGCACTTCAGAGTAGAGGG...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCCATCCTTGGGGCATTTaGGAATGGCTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSHPWGI*EWLASQ
Trigger: CTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATG...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CCA 90 bp CCATCTGTAGACGGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTAGAAGAGCGGCATCATaGGAAGGATGGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: PSVDGGYFLLALSSSSLSRRAAS*EGWFMC
Trigger: ACACATGAACCATCCTTCCCATGATGCCGCTCTTCT...AGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACCGTCTACAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTGCTGGTGGGAAAGCATaGGCTTCAGCTCCTGAACAG +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLAGGKA*ASAPEQ
Trigger: CTGTTCAGGAGCTGAAGCCCATGCTTTCCCACCAGC...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGGAGACAGAGGAGTGCTaGGGGCAGGCGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLETEEC*GQATWP
Trigger: TGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTC...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCGGGGTTTTGCCATGTTaGCTGGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCGVLPC*LGWSRT
Trigger: AGTTCGAGACCAGCCCAGCCAACATGGCAAAACCCC...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTAGCCTCAGGTGTAGCTaGGATTACAGGCGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFSLRCS*DYRRVP
Trigger: TGGCACACGCCTGTAATCCCAGCTACACCTGAGGCT...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAAATCTTCATCAATTACTaGCCCATTCCACTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKIFINY*PIPLPV
Trigger: TACTGGAAGTGGAATGGGTCAGTAATTGATGAAGAT...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp AGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGCATCCCTTCCATAAATaGACAGCTTATATCCACACT +
Preference number: 4 (lower is better)
Translates to: SNWCLDEGDRRWTGMWYLHPFHK*TAYIHT
Trigger: AGTGTGGATATAAGCTGTTCATTTATGGAAGGGATG...CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR TCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCTGTGTAAAGTCCCCTaGCCAGCGGATAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFLCKVP*PADSPM
Trigger: CATGGGGCTATCCGCTGGTCAGGGGACTTTACACAG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR TCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTCTGGCATGTGGTACCTaGCATTCTTCCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGLACGT*HSSRTL
Trigger: CAAGGTTCTGGAAGAATGTCAGGTACCACATGCCAG...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp AATTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACACTGGCATGTGGTACCTaGCATTCTTCCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: NCIWDPKSTSIVSLAGLTLACGT*HSSRTL
Trigger: CAAGGTTCTGGAAGAATGTCAGGTACCACATGCCAG...TGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAAATAAGTACAGTCTATTaGTCCGTGATGCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKISTVY*SVMHAV
Trigger: TACAGCATGCATCACGGATCAATAGACTGTACTTAT...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCGCCCTGGGCTGCTATTaGCGTCATGGCTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSALGCY*RHGLFP
Trigger: AGGGAATAAGCCATGACGTCAATAGCAGCCCAGGGC...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp AGTAACTGGTGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGTTATACATGGCTATTTaGTCTTCAGATGAACCACCC +
Preference number: 4 (lower is better)
Translates to: SNWCLDEGDRRWTGMWYLLYMAI*SSDEPP
Trigger: GGGTGGTTCATCTGAAGAGCAAATAGCCATGTATAA...CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACACCAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR GCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTACCAGAACCTTGTCTTTaGAGACTGTGGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLPEPCL*RLWSLC
Trigger: ACACAGGGACCACAGTCTGCAAAGACAAGGTTCTGG...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR GCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCTTTGAGACGGAGTCTTaGTCTGTTGCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFFETES*SVARLE
Trigger: CTCTAGCCTGGCAACAGAGCAAGACTCCGTCTCAAA...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGATTCATGTGTGGGCTGTaGAAGGGACATTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRFMCGL*KGHCRR
Trigger: CCGTCTGCAATGTCCCTTGCACAGCCCACACATGAA...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTCACCACCATCTCTaGAGTGGGCCTGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLAHHHL*SGPDQR
Trigger: TCTCTGGTCAGGCCCACTGCAGAGATGGTGGTGAGC...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp TTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATGCAGAATCTATGTTACATGTaGAAATTGCTCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LQTEEATRELFLQRRKMQNLCYM*KLLLEG
Trigger: GCCTTCCAGGAGCAATTTGCACATGTAACATAGATT...CTGCATTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp GTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCGTGATCTTGGATCACTaGAGCCTCAAACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: VKSPDQRIAPCFCLMNLIVILDH*SLKLLG
Trigger: GCCTAGGAGTTTGAGGCTGCAGTGATCCAAGATCAC...GATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CCA 90 bp ATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: IVSLAGLTITGLVGLFSSAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...AGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CCA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGTGGGGCATTTGGGAATaGCTGGCCTCCCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWWGIWE*LASQEV
Trigger: CACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCA...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATCATCCTTGGGGCATTTaGGAATGGCTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHHPWGI*EWLASQ
Trigger: CTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATG...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CCA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGAGCATCATGGGAAGGATaGTTCATGTGTGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRASWEG*FMCGLC
Trigger: GCACAGCCCACACATGAACCATCCTTCCCATGATGC...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCCTGGGAGTGACATGCTaGTGGGAAAGCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSLGVTC*WESMGF
Trigger: GAAGCCCATGCTTTCCCACCAGCATGTCACTCCCAG...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CAA 72 bp CTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTaGCACTTTTCTGTTTGGATCTTCCTCCACCCACGC +
Preference number: 4 (lower is better)
Translates to: LQNSTLGRWGIT*HFSVWIFLHPR
Trigger: GCGTGGGTGGAGGAAGATCCAAACAGAAAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNAIVMS*ILHLSR
Trigger: CCTGCTAAGGTGGAGGATTCAGGACATTACTATTGC...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLAIVMS*ILHLSR
Trigger: CCTGCTAAGGTGGAGGATTCAGGACATTACTATTGC...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR TCA 90 bp GCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCTCTATGCTTTTCAGCTATTTGCTCTTCAGATaGACCACCCAGCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: AQVCVGCMTSIVPSMLFSYLLFR*TTQPAE
Trigger: TTCAGCTGGCTGGGTGGTTCATCTGAAGAGCAAATA...GCTGAAAAGCATAGAGGGAACTATACTTGTCATGCATCCTACACATACTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTATGTGCCGCAGCAGAGTaGCAACTCACATCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLCAAAE*QLTSCR
Trigger: CCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACA...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR TCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTAGTCTGTGTGTCAAATaGAAGCTAGGCCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGSLCVK*KLGPVC
Trigger: ACAGACAGGGCCTAGCTTTCATTTGACACACAGACT...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCGATTCTGGCATTTGCGTCTACCCTCATTaGCTCAAGCAGCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DQRIAPCFCLMNLIDSGICVYPH*LKQLEK
Trigger: CTTCTCAAGCTGCTTGAGTCAATGAGGGTAGACGCA...AATGCCAGAATCGATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR GCA 90 bp AGAACTCTTGGCAACTTCTCCATGCTACCCGAGAGGCACGTGAGCCTCTCTTTGCATATACCAATCATGTaGTTCTGGAAATTAGTGACT +
Preference number: 4 (lower is better)
Translates to: RTLGNFSMLPERHVSLSLHIPIM*FWKLVT
Trigger: AGTCACTAATTTCCAGAAGCACATGATTGGTATATG...CAAAGAGAGGCTCACGTGCCTCTCGGGTAGCATGGAGAAGTTGCCAAGAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTACCATCTTCAGAGGGTaGGTCTACCGTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSTIFRG*VYRLRS
Trigger: AGAACGGAGACGGTAGACGCACCCTCTGAAGATGGT...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR GCA 90 bp CCATCTGTAGACGGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTGCAACGGGTAGTTTCTaGTTAAATATGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PSVDGGYFLLALSSSSLSATGSF*LNMACA
Trigger: TGCACAAGCCATATTTAAGCAGAAACTACCCGTTGC...AGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACCGTCTACAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTTTGAGACGGAGTCTTaGTCTGTTGCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLFETES*SVARLE
Trigger: CTCTAGCCTGGCAACAGAGCAAGACTCCGTCTCAAA...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCCTGTGCAAGGGACATTaGAGACGGAGGAAGCCACTA +
Preference number: 4 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFLCKGH*RRRKPL
Trigger: TAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAG...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp CTGTCTGTTGGAACAGCAGCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGCAAGAAGTAGAGGTTTaGAATCCTTATACCACTGTA +
Preference number: 4 (lower is better)
Translates to: LSVGTAAPEQHCSFKQAKQEVEV*NPYTTV
Trigger: TACAGTGGTATAAGGATTGCAAACCTCTACTTCTTG...CTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGCTGCTGTTCCAACAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCAACCATCTTCAGAGGGTaGGTCTACCTGGACGGACGG +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPTIFRG*VYLDGR
Trigger: CCGTCCGTCCAGGTAGACGCACCCTCTGAAGATGGT...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS-3UTR GCA 90 bp GTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTCCACACCGGGCCTACTaGCTTTTTAAAAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: VLSMFIQLLKLCLCPAIGPHRAY*LFKRSS
Trigger: GGAAGATCTTTTAAAAAGGCAGTAGGCCCGGTGTGG...ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTTTCAAGCAATTCTCCTaGCTCAGCCTCAGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFFKQFS*LSLRCS
Trigger: GCTACACCTGAGGCTGAGGCAGGAGAATTGCTTGAA...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp CGATTCTGGCATTTTCTCATAGTCTTGGATTTTCTCCAGCTCAAGCAGGACAACGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: RFWHFLIVLDFLQLKQDNAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...GTTGTCCTGCTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATGCCAGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CCA 90 bp CGATTCTGGCATTTTCTCATAGTCTTGGATTTTCTCCAGCTCAAGCAGGACAACCATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RFWHFLIVLDFLQLKQDNHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...GTTGTCCTGCTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATGCCAGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCCAGATCAATTGTATCTaGGATCCCAAGTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: SIVSLAGLTITGLVGLFSQINCI*DPKSTS
Trigger: GGAAGTAGACTTGGGATCCCAGATACAATTGATCTG...GGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTCTTTGCAGACTGTaGTCCCTGTGTAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLCLCRL*SLCKVP
Trigger: GGGGACTTTACACAGGGACCACAGTCTGCAAAGACA...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATTCGGACACTAACTTCTaGCTGGGGATGTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNSDTNF*LGMCME
Trigger: TTCCATACACATCCCCAGCCAGAAGTTAGTGTCCGA...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CATACAACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTGGTGGGAAAGCATaGGCTTCAGCTCCTGAACAG +
Preference number: 4 (lower is better)
Translates to: HTTLKTVLVSCNRWHINLAGGKA*ASAPEQ
Trigger: CTGTTCAGGAGCTGAAGCCCATGCTTTCCCACCAGC...CAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATATCACCCCCACTCTCTaGCCAATTTTGTCACTAACC +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNITPTL*PILSLT
Trigger: GGTTAGTGACAAAATTGGCCAGAGAGTGGGGGTGAT...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CAA 72 bp GCCCTTTCTTCTAGTTCGCTGTCTCCATGCCTTTTCTaGGCAGTTCAAACATTCAGAGAGGGCATTTATTGC +
Preference number: 4 (lower is better)
Translates to: ALSSSSLSPCLF*AVQTFREGIYC
Trigger: GCAATAAATGCCCTCTCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAGACAGCGAACTAGAAGAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATCACTCAACTGGCCGGTaGCATTACAGATCAATTGTA +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNHSTGR*HYRSIV
Trigger: TACAATTGATCTGTAATGTCACCGGCCAGTTGAGTG...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp GCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCTCTATGCTTTTCAGCCACTCAACTGGCCGGTaGCATTACAGATCAATTGTA +
Preference number: 4 (lower is better)
Translates to: AQVCVGCMTSIVPSMLFSHSTGR*HYRSIV
Trigger: TACAATTGATCTGTAATGTCACCGGCCAGTTGAGTG...GCTGAAAAGCATAGAGGGAACTATACTTGTCATGCATCCTACACATACTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp ACTCAACTGGCCGGTGACATTACAGATCAATTGTATCTGGGATCCCAAGTCTACTTTCTTCACGTTCCTTaGATTTATCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TQLAGDITDQLYLGSQVYFLHVP*IYQPPE
Trigger: CTCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAA...GTAGACTTGGGATCCCAGATACAATTGATCTGTAATGTCACCGGCCAGTTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp GATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTCAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: DPKSTSIVSLAGLTITGLQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...AAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR GCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCCCAGAACCTTGTCTTTaGAGACTGTGGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSPEPCL*RLWSLC
Trigger: ACACAGGGACCACAGTCTGCAAAGACAAGGTTCTGG...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTACCATCTTCAGAGGGTaGGTCTACCGTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFTIFRG*VYRLRS
Trigger: AGAACGGAGACGGTAGACGCACCCTCTGAAGATGGT...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR GCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCAGGCGTGTGCCACCATaGCTAGCTCATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFRRVPP*LAHFCI
Trigger: AATACAAAAATGAGCTAGGCATGGTGGCACACGCCT...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp GGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTAGAGTAATAAATTCTCATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLTITGLVGLFSSRVINSHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...AGAATTTATTACTCTAGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTGCAATGTCACTCAACTaGCCGGTGACATTACAGATC +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLAMSLN*PVTLQI
Trigger: GATCTGTAATGTCACCGGCCAGTTGAGTGACATTGC...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp CTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATGAAGGTGACCGTCGCTaGACTGGCATGTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: LKIVKHIPLCHDLLERWNEGDRR*TGMWYL
Trigger: CAGGTACCACATGCCAGTCCAGCGACGGTCACCTTC...ATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCGCCATCTGTAGACGGTaGCTATTTCCTTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSAICRR*LFPSCP
Trigger: AGGGCAAGAAGGAAATAGCCACCGTCTACAGATGGC...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp GCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACTCTTGGCAACTTCTCCAAAAACTTTGGAATCCTaGAGAATCCCTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ACNAIRQEAPKELLATSPKTLES*RIPLFI
Trigger: AATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTT...TGGAGAAGTTGCCAAGAGTTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
3UTR CAA 72 bp AATGTCACTCAACTGGCCGGTGACATTACAGATCAATaGTATCTGGGATCCCAAGTCTACTTCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: NVTQLAGDITDQ*YLGSQVYFHCL
Trigger: GAGACAATGGAAGTAGACTTGGGATCCCAGATACAATTGATCTGTAATGTCACCGGCCAGTTGAGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSAIVMS*ILHLSR
Trigger: CCTGCTAAGGTGGAGGATTCAGGACATTACTATTGC...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp TACCACTCCTGTTTAATTGTATCAGTTGTAAAGCAACTGTTGGGTTTAACTAGTTACCCGAGAGGCACGTaGGCCTCTCTTTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YHSCLIVSVVKQLLGLTSYPRGT*ASLCSF
Trigger: GAAACTGCAAAGAGAGGCTCACGTGCCTCTCGGGTA...ACTAGTTAAACCCAACAGTTGCTTTACAACTGATACAATTAAACAGGAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR TCA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGAATTCCCTTAATAATCTaGTTCCAGGTGACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRIPLII*FQVTSG
Trigger: CCCTGAGGTCACCTGGAATCAGATTATTAAGGGAAT...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp ATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTCAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: IVSLAGLTITGLVGLFSSQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...AGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR GCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAGCAACGGGTAGTTTCTaGTTAAATATGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLATGSF*LNMACA
Trigger: TGCACAAGCCATATTTAAGCAGAAACTACCCGTTGC...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR GCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAGTTCGCTGTCTCCATaGCTTTTCTTGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCSSLSP*LFLAVQ
Trigger: TTGAACTGCCAAGAAAAGGCATGGAGACAGCGAACT...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGAGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTACAGATCAATTGTATCTaGGATCCCAAGTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLQINCI*DPKSTS
Trigger: GGAAGTAGACTTGGGATCCCAGATACAATTGATCTG...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CCA 90 bp CGATTCTGGCATTTTCTCATAGTCTTGGATTTTCTCCAGCTCAAGCAGGACAACCAGATCAATTGTATCTaGGATCCCAAGTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: RFWHFLIVLDFLQLKQDNQINCI*DPKSTS
Trigger: GGAAGTAGACTTGGGATCCCAGATACAATTGATCTG...GTTGTCCTGCTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATGCCAGAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTTGTCTTTGCAGACTGTaGTCCCTGTGTAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFCLCRL*SLCKVP
Trigger: GGGGACTTTACACAGGGACCACAGTCTGCAAAGACA...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCAAAGGAAGGAGAAAGTaGGGTTTTGGAGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCKGRRK*GFGDGC
Trigger: ACAGCCATCTCCAAAACCCCACTTTCTCCTTCCTTT...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGGAGTGACATGCTGGTaGGAAAGCATGGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSGVTCW*ESMGFS
Trigger: GCTGAAGCCCATGCTTTCCCACCAGCATGTCACTCC...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGAATCACCCCCACTCTCTaGCCAATTTTGTCACTAACC +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGITPTL*PILSLT
Trigger: GGTTAGTGACAAAATTGGCCAGAGAGTGGGGGTGAT...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
3UTR CAA 72 bp TCGCCTCTTAGGGAAAGTCTCCCAGAGACTGTGGAATaGGAGGATGTTCTGAATTTTGGTAAAATTCTGATC +
Preference number: 4 (lower is better)
Translates to: SPLRESLPETVE*EDVLNFGKILI
Trigger: GATCAGAATTTTACCAAAATTCAGAACATCCTCCAATTCCACAGTCTCTGGGAGACTTTCCCTAAGAGGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCTCTATGCTTTTCAGCATCTTCATCAATTACTaGCCCATTCCACTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: AQVCVGCMTSIVPSMLFSIFINY*PIPLPV
Trigger: TACTGGAAGTGGAATGGGTCAGTAATTGATGAAGAT...GCTGAAAAGCATAGAGGGAACTATACTTGTCATGCATCCTACACATACTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR TCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACTGGCATGTGGTACCTaGCATTCTTCCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPLACGT*HSSRTL
Trigger: CAAGGTTCTGGAAGAATGTCAGGTACCACATGCCAG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR TCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACCCACGCTTATCCATTaGTTCTTGTCCCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGPTLIH*FLSLLK
Trigger: TTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGG...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCCAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp CATTCTCTCCTGAACCAAAGCCACACAAGGCTTTTCACAACCGTATGGCTCCTACATATACCAATCATGTaGTTCTGGAAATTAGTGACT +
Preference number: 4 (lower is better)
Translates to: HSLLNQSHTRLFTTVWLLHIPIM*FWKLVT
Trigger: AGTCACTAATTTCCAGAAGCACATGATTGGTATATG...TAGGAGCCATACGGTTGTGAAAAGCCTTGTGTGGCTTTGGTTCAGGAGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR GCA 90 bp TACTTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTGGATACAGTATATATaGGTCATAGGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: YFHCLISWAHNHRPCGFVWIQYI*VIGLSI
Trigger: GATGGAAAGACCTATGACGCATATATACTGTATCCA...AACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp TTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTAGAGTAATATTATACATGGCTATTTaGTCTTCAGATGAACCACCC +
Preference number: 4 (lower is better)
Translates to: LAGLTITGLVGLFSSRVILYMAI*SSDEPP
Trigger: GGGTGGTTCATCTGAAGAGCAAATAGCCATGTATAA...TATTACTCTAGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTACTGTGCTTGTGTCCTaGAATCGGTGGCATATAAAT +
Preference number: 4 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLTVLVS*NRWHIN
Trigger: ATTTATATGCCACCGATTGCAGGACACAAGCACAGT...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTCAACTCTTAAAACTGTaGTTGTGTCCTGCAATCGGT +
Preference number: 4 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFQLLKL*LCPAIG
Trigger: ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTG...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACACATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: NCETYTPMPRSSRKMESTHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTGCAATGTCACTCAACTaGCCGGTGACATTACAGATC +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFAMSLN*PVTLQI
Trigger: GATCTGTAATGTCACCGGCCAGTTGAGTGACATTGC...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp CAATTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACCAAGAGCATTATACATaGCTATTTGCTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: QLYLGSQVYFHCLISWAHQEHYT*LFALQM
Trigger: CATCTGAAGAGCAAATAGCCATGTATAATGCTCTTG...GTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCGAAAGCATTAAGAAGTaGATCAATTCCCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFESIKK*INSLLL
Trigger: CAGTAGCAGGGAATTGATCCACTTCTTAATGCTTTC...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCAGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPAIVMS*ILHLSR
Trigger: CCTGCTAAGGTGGAGGATTCAGGACATTACTATTGC...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGAGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERAIVMS*ILHLSR
Trigger: CCTGCTAAGGTGGAGGATTCAGGACATTACTATTGC...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACACACTCAACTGGCCGGTaGCATTACAGATCAATTGTA +
Preference number: 4 (lower is better)
Translates to: NCETYTPMPRSSRKMESTHSTGR*HYRSIV
Trigger: TACAATTGATCTGTAATGTCACCGGCCAGTTGAGTG...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp ACCAAAAGTCCTCTCCATGTTCATACAACTCTTAAAACTGTGCTTGTGTCCTGCTCTGAGGCAGTAAGATaGATTTCTTACCACGCAATA +
Preference number: 4 (lower is better)
Translates to: TKSPLHVHTTLKTVLVSCSEAVR*ISYHAI
Trigger: TATTGCGTGGTAAGAAATTCATCTTACTGCCTCAGA...GCAGGACACAAGCACAGTTTTAAGAGTTGTATGAACATGGAGAGGACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATTGGAATTTGGTGTCTTaGATAAAAGCATTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNWNLVS*IKAFLD
Trigger: GTCTAGGAATGCTTTTATTCAAGACACCAAATTCCA...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTCAGTCTATTGATCCGTaGTGCATGCTGTACATGAAT +
Preference number: 4 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSQSIDP*CMLYMN
Trigger: ATTCATGTACAGCATGCATCACGGATCAATAGACTG...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGGTTAATTCAGGTCTGTaGCGCAGCAGAGTGACAACT +
Preference number: 4 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWVNSGL*RSRVTT
Trigger: AGTTGTCACTCTGCTGCGGCACAGACCTGAATTAAC...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR GCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCCAACTCTTAAAACTGTaGTTGTGTCCTGCAATCGGT +
Preference number: 4 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFQLLKL*LCPAIG
Trigger: ACCGATTGCAGGACACAAGCACAGTTTTAAGAGTTG...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCAGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTACATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCCAGATCAATTGTATCTaGGATCCCAAGTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFQINCI*DPKSTS
Trigger: GGAAGTAGACTTGGGATCCCAGATACAATTGATCTG...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGCAATGTCACTCAACTaGCCGGTGACATTACAGATC +
Preference number: 4 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLAMSLN*PVTLQI
Trigger: GATCTGTAATGTCACCGGCCAGTTGAGTGACATTGC...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp GTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCCCAATCATGTGCTTCTaGAAATTAGTGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: VKSPDQRIAPCFCLMNLIPIMCF*KLVTGY
Trigger: ATATCCAGTCACTAATTTCCAGAAGCACATGATTGG...GATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCCAAGAGCATTATACATaGCTATTTGCTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFQEHYT*LFALQM
Trigger: CATCTGAAGAGCAAATAGCCATGTATAATGCTCTTG...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACTCCATGCCTTTTCTTaGCAGTTCAAACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGLHAFS*QFKHSE
Trigger: CTCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAG...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGAGTGTCCTGCAATCGGTaGCATATAAATTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGVSCNR*HINLAF
Trigger: GAAAGCCAAATTTATATGCCACCGATTGCAGGACAC...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACACTCAACTGGCCGGTaGCATTACAGATCAATTGTA +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPHSTGR*HYRSIV
Trigger: TACAATTGATCTGTAATGTCACCGGCCAGTTGAGTG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCCATCCCTTCCATAAATaGACAGCTTATATCCACACT +
Preference number: 4 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFHPFHK*TAYIHT
Trigger: AGTGTGGATATAAGCTGTTCATTTATGGAAGGGATG...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR TCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTTATTTGCTCTTCAGATaGACCACCCAGCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSYLLFR*TTQPAE
Trigger: TTCAGCTGGCTGGGTGGTTCATCTGAAGAGCAAATA...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCTTCACGTTCCTTaGATTTATCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NCETYTPMPRSSRKMESTFLHVP*IYQPPE
Trigger: CTCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAA...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp ATATTGCTTGCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCTCTATGCAAGAAGTAGAGGTTTaGAATCCTTACCACGCAATA +
Preference number: 4 (lower is better)
Translates to: ILLAQVCVGCMTSIVPSMQEVEV*NPYHAI
Trigger: TATTGCGTGGTAAGGATTGCAAACCTCTACTTCTTG...CATAGAGGGAACTATACTTGTCATGCATCCTACACATACTTGGGCAAGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR GCA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAGCAACGGGTAGTTTCTaGTTAAATATGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NCETYTPMPRSSRKMESTATGSF*LNMACA
Trigger: TGCACAAGCCATATTTAAGCAGAAACTACCCGTTGC...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCTCCAAAGACGTAAAATaGAGGATAATAACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFSKDVK*RIITKD
Trigger: GTCCTTTGTTATTATCCTGCATTTTACGTCTTTGGA...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCCTTTCATATTCTTCTTaGAGAAGGCCTTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFLSYSS*RRPCLL
Trigger: TAAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAG...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TCATCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACG +
Preference number: 4 (lower is better)
Translates to: SSYTSEEVLKIVKHIPLCAFVFI*VKRTGT
Trigger: CGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGC...GCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp CTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCATTGTCTCATTAGCTaGGCTCACAATCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: LKIVKHIPLCHDLLERWNHCLIS*AHNHRP
Trigger: AGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATG...ATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATCAGATCAATTGTATCTaGGATCCCAAGTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHQINCI*DPKSTS
Trigger: GGAAGTAGACTTGGGATCCCAGATACAATTGATCTG...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp AGGGAGCTGTTCCTCCAAAGACGTAAAATGCAGGATAATAACAAAGGACAGGATCCAATCATGTGCTTCTaGAAATTAGTGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: RELFLQRRKMQDNNKGQDPIMCF*KLVTGY
Trigger: ATATCCAGTCACTAATTTCCAGAAGCACATGATTGG...ATCCTGTCCTTTGTTATTATCCTGCATTTTACGTCTTTGGAGGAACAGCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CCA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGCTGGTGACAGTAACTaGTGTTTAGATGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLAGDSN*CLDEGD
Trigger: GTCACCTTCATCTAAACACCAGTTACTGTCACCAGC...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTTCGGACACTAACTTCTaGCTGGGGATGTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSSDTNF*LGMCME
Trigger: TTCCATACACATCCCCAGCCAGAAGTTAGTGTCCGA...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGAGAAAGCATTAAGAAGTaGATCAATTCCCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGESIKK*INSLLL
Trigger: CAGTAGCAGGGAATTGATCCACTTCTTAATGCTTTC...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAATCTTCATCAATTACTaGCCCATTCCACTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: NCETYTPMPRSSRKMESTIFINY*PIPLPV
Trigger: TACTGGAAGTGGAATGGGTCAGTAATTGATGAAGAT...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATCATCCCTTCCATAAATaGACAGCTTATATCCACACT +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHHPFHK*TAYIHT
Trigger: AGTGTGGATATAAGCTGTTCATTTATGGAAGGGATG...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTTCTGAGGCAGTAAGATaGATTTCTTACCACGCAATA +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFSEAVR*ISYHAI
Trigger: TATTGCGTGGTAAGAAATTCATCTTACTGCCTCAGA...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTTGTGGAAAGCTAAGATaGCTTCAAAACTTTGGAATC +
Preference number: 4 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSCGKLR*LQNFGI
Trigger: GATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACA...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCTGGAATTTGGTGTCTTaGATAAAAGCATTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSWNLVS*IKAFLD
Trigger: GTCTAGGAATGCTTTTATTCAAGACACCAAATTCCA...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCATTTCTTCACGTTCCTTaGATTTATCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPFLHVP*IYQPPE
Trigger: CTCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAA...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTCATATACCAATCATGTaGTTCTGGAAATTAGTGACT +
Preference number: 4 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFHIPIM*FWKLVT
Trigger: AGTCACTAATTTCCAGAAGCACATGATTGGTATATG...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR GCA 90 bp TCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGCAACGGGTAGTTTCTaGTTAAATATGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SYTSEEVLKIVKHIPLCHATGSF*LNMACA
Trigger: TGCACAAGCCATATTTAAGCAGAAACTACCCGTTGC...GTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp AATAGGATATTGCTTGCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCCAAGAAGTAGAGGTTTaGAATCCTTATACCACTGTA +
Preference number: 4 (lower is better)
Translates to: NRILLAQVCVGCMTSIVPQEVEV*NPYTTV
Trigger: TACAGTGGTATAAGGATTGCAAACCTCTACTTCTTG...GGGAACTATACTTGTCATGCATCCTACACATACTTGGGCAAGCAATATCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422532.2
CDS-3UTR CCA 90 bp AGTAATAAATTCTATTACCCGGGTAATAGGATATTGCTTGCCCAAGTATGTGTAGCTGGTGACAGTAACTaGTGTTTAGATGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SNKFYYPGNRILLAQVCVAGDSN*CLDEGD
Trigger: GTCACCTTCATCTAAACACCAGTTACTGTCACCAGC...TACACATACTTGGGCAAGCAATATCCTATTACCCGGGTAATAGAATTTATTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp CTGGATATATTAACTGGATATATGCTGCATCTATACCATGTGTATTCTTGGCAACACCTAAAGAACTCTTaGCAACTTCTCCATGCTACC +
Preference number: 4 (lower is better)
Translates to: LDILTGYMLHLYHVYSWQHLKNS*QLLHAT
Trigger: GGTAGCATGGAGAAGTTGCCAAGAGTTCTTTAGGTG...TTGCCAAGAATACACATGGTATAGATGCAGCATATATCCAGTTAATATATCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp TCATCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCAAAGGAAGGAGAAAGTaGGGTTTTGGAGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSYTSEEVLKIVKHIPLCKGRRK*GFGDGC
Trigger: ACAGCCATCTCCAAAACCCCACTTTCTCCTTCCTTT...GCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CCA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGCTCCATGCCTTTTCTTaGCAGTTCAAACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLLHAFS*QFKHSE
Trigger: CTCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAG...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGTCTACTTGTAATTCTTaGTCATCATCACCCCCACTC +
Preference number: 4 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLSTCNS*SSSPPL
Trigger: GAGTGGGGGTGATGATGACCAAGAATTACAAGTAGA...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGATCTTCATCAATTACTaGCCCATTCCACTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWIFINY*PIPLPV
Trigger: TACTGGAAGTGGAATGGGTCAGTAATTGATGAAGAT...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGCATCCCTTCCATAAATaGACAGCTTATATCCACACT +
Preference number: 4 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWHPFHK*TAYIHT
Trigger: AGTGTGGATATAAGCTGTTCATTTATGGAAGGGATG...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR TCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCATCTGAGGCAGTAAGATaGATTTCTTACCACGCAATA +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPSEAVR*ISYHAI
Trigger: TATTGCGTGGTAAGAAATTCATCTTACTGCCTCAGA...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTTTTCTTCACGTTCCTTaGATTTATCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSFLHVP*IYQPPE
Trigger: CTCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAA...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGCAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGACAAGTATGTGTAGGATaGATGACAAGTATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERQVCVG*MTSIVP
Trigger: GGGAACTATACTTGTCATGCATCCTACACATACTTG...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTGGATACAGTATATATaGGTCATAGGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHWIQYI*VIGLSI
Trigger: GATGGAAAGACCTATGACGCATATATACTGTATCCA...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCAAGAAGTAGAGGTTTaGAATCCTTATACCACTGTA +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFQEVEV*NPYTTV
Trigger: TACAGTGGTATAAGGATTGCAAACCTCTACTTCTTG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTAAACATATACCCCTATaGCACGATCTTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFKHIPL*HDLLER
Trigger: TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTT...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp AATAGGATATTGCTTGCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCCTTTCATATTCTTCTTaGAGAAGGCCTTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NRILLAQVCVGCMTSIVPLSYSS*RRPCLL
Trigger: TAAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAG...GGGAACTATACTTGTCATGCATCCTACACATACTTGGGCAAGCAATATCCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCCAATCATGTGCTTCTaGAAATTAGTGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFPIMCF*KLVTGY
Trigger: ATATCCAGTCACTAATTTCCAGAAGCACATGATTGG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATCCAATCATGTGCTTCTaGAAATTAGTGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHPIMCF*KLVTGY
Trigger: ATATCCAGTCACTAATTTCCAGAAGCACATGATTGG...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCAAGAGCATTATACATaGCTATTTGCTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFQEHYT*LFALQM
Trigger: CATCTGAAGAGCAAATAGCCATGTATAATGCTCTTG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CCA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCAAAACTTTGGAATCCTaGAGAATCCCTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSKTLES*RIPLFI
Trigger: AATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTT...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CCA 90 bp TCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACCTTTTCACAACCGTATaGCTCCTAATGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SYTSEEVLKIVKHIPLCHLFTTV*LLMPFS
Trigger: AGAAAAAGGCATTAGGAGCCATACGGTTGTGAAAAG...GTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR TCA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTTCTGAGGCAGTAAGATaGATTTCTTACCACGCAATA +
Preference number: 4 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSSEAVR*ISYHAI
Trigger: TATTGCGTGGTAAGAAATTCATCTTACTGCCTCAGA...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR TCA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGTGTGGAAAGCTAAGATaGCTTCAAAACTTTGGAATC +
Preference number: 4 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLCGKLR*LQNFGI
Trigger: GATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACA...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR GCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCATATACCAATCATGTaGTTCTGGAAATTAGTGACT +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFHIPIM*FWKLVT
Trigger: AGTCACTAATTTCCAGAAGCACATGATTGGTATATG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGACAAGAAGTAGAGGTTTaGAATCCTTATACCACTGTA +
Preference number: 4 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERQEVEV*NPYTTV
Trigger: TACAGTGGTATAAGGATTGCAAACCTCTACTTCTTG...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAAAACATATACCCCTATaGCACGATCTTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLKHIPL*HDLLER
Trigger: TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTT...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCTTTCATATTCTTCTTaGAGAAGGCCTTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: CETYTPMPRSSRKMESTFLSYSS*RRPCLL
Trigger: TAAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACCAATCATGTGCTTCTaGAAATTAGTGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPPIMCF*KLVTGY
Trigger: ATATCCAGTCACTAATTTCCAGAAGCACATGATTGG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATATACCAATCATGTaGTTCTGGAAATTAGTGACT +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPHIPIM*FWKLVT
Trigger: AGTCACTAATTTCCAGAAGCACATGATTGGTATATG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR GCA 90 bp TACCACTCCTGTTTAATTGTATCAGTTGTAAAGCAACTGTTGGGTTTAACTAGTTGGATACAGTATATATaGGTCATAGGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: YHSCLIVSVVKQLLGLTSWIQYI*VIGLSI
Trigger: GATGGAAAGACCTATGACGCATATATACTGTATCCA...ACTAGTTAAACCCAACAGTTGCTTTACAACTGATACAATTAAACAGGAGTGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR GCA 90 bp CTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATAAACATATACCCCTATaGCACGATCTTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LKIVKHIPLCHDLLERWNKHIPL*HDLLER
Trigger: TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTT...ATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACTTTCATATTCTTCTTaGAGAAGGCCTTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPLSYSS*RRPCLL
Trigger: TAAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAG...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CCA 90 bp TACCACTCCTGTTTAATTGTATCAGTTGTAAAGCAACTGTTGGGTTTAACTAGTGAATTTTCCTTAAACTaGGTGTCACCTCCCATTTTT +
Preference number: 4 (lower is better)
Translates to: YHSCLIVSVVKQLLGLTSEFSLN*VSPPIF
Trigger: AAAAATGGGAGGTGACACCCAGTTTAAGGAAAATTC...ACTAGTTAAACCCAACAGTTGCTTTACAACTGATACAATTAAACAGGAGTGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS GCA 90 bp CTCAGAGGGGCGAGAGCCCTAGGAGCCGAGCGAGGAGTGCTTCGGTaGGCGGGCGCGCGATTGTCACATTCCTGCCGCTCCCTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: LRGARALGAERGVLR*AGARLSHSCRSLGR
Trigger: GCGCCCCAGGGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCACCGAAGCACTCCTCGCTCGGCTCCTAGGGCTCTCGCCCCTCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409288.5
ENST00000410023.6
CDS CCA 90 bp AGGGTGCGTCTACCTAGCCACTACGACCTGGCTCTACTACCCCCATaGAGCCTGGCTGCGACCCGCGAATTGAGTTGGCGACTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RVRLPSHYDLALLPP*SLAATRELSWRLQG
Trigger: GCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCCAGGTCGTAGTGGCTAGGTAGACGCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS-3UTR CAA 90 bp AGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGCTGTGCAAGGGACATaGCAGACGGAGGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: SRDRGVLGAGDMATRPTWAVQGT*QTEEAT
Trigger: AGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGC...CCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS TCA 90 bp ACCTGGCTCTACTACCCCCATGGAGCCTGGCTGCGACCCGCGAATTaGGTTGGCGACTCCAGGGCATCAGATCCCGAAGCAAACGCTCGC +
Preference number: 5 (lower is better)
Translates to: TWLYYPHGAWLRPAN*VGDSRASDPEANAR
Trigger: GCGAGCGTTTGCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CCA 90 bp GCTCTACTACCCCCATGGAGCCTGGCTGCGACCCGCGAATTGAGTTaGCGACTCCAGGGCATCAGATCCCGAAGCAAACGCTCGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ALLPPWSLAATRELS*RLQGIRSRSKRSPE
Trigger: CTCTGGCGAGCGTTTGCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS TCA 90 bp AGCTCCCTCGGGCTTTCCCCCTCCACTTCGCTAGTCTTCAGCAAGTaGCTGGCCCCTCCAGCTTGTTTGGAGGTCTTCATGGGCCATCCT +
Preference number: 5 (lower is better)
Translates to: SSLGLSPSTSLVFSK*LAPPACLEVFMGHP
Trigger: AGGATGGCCCATGAAGACCTCCAAACAAGCTGGAGGGGCCAGTCACTTGCTGAAGACTAGCGAAGTGGAGGGGGAAAGCCCGAGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450319.5
CDS-3UTR CAA 90 bp TCAGAGAGCAGCAATTCCAGCTGGAGGGAGACCAGCCTCCCAGATGTGCTCACCGGTGTCAGTCTCACTTaGCCTGCAGCACCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SESSNSSWRETSLPDVLTGVSLT*PAAPLR
Trigger: CCTGAGAGGTGCTGCAGGCAAAGTGAGACTGACACC...GGTGAGCACATCTGGGAGGCTGGTCTCCCTCCAGCTGGAATTGCTGCTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS CCA 90 bp GGTGCGTCTACCGTCTCCGTTCTTCATCCTTGGGGCATTTGGGAATaGCTGGCCTCCCAGGAGGTGGAGAATGTCGGGGTAATCCGACAA +
Preference number: 5 (lower is better)
Translates to: GASTVSVLHPWGIWE*LASQEVENVGVIRQ
Trigger: TTGTCGGATTACCCCGACATTCTCCACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAGACGGTAGACGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CCA 90 bp TCAGAGGGTGCGTCTACCGTCTCCGTTCTTCATCCTTGGGGCATTTaGGAATGGCTGGCCTCCCAGGAGGTGGAGAATGTCGGGGTAATC +
Preference number: 5 (lower is better)
Translates to: SEGASTVSVLHPWGI*EWLASQEVENVGVI
Trigger: GATTACCCCGACATTCTCCACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAGACGGTAGACGCACCCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS-3UTR CAA 90 bp CATGTGTGGGCTGTGCAAGGGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGCTCCGTTCTTCATCCTaGGGGCATTTGGGAATGGCT +
Preference number: 5 (lower is better)
Translates to: HVWAVQGTLQTEEATRELLRSSS*GHLGMA
Trigger: AGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAG...CAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CAA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAATGTTACATGTGCAAATaGCTCCTGGAAGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RHGHQANLGIHTAGQRGECYMCK*LLEGSE
Trigger: CTCACTGCCTTCCAGGAGCAATTTGCACATGTAACA...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAATTTGCACTTTTCTGTTaGGATCTTCCTCCACCCACG +
Preference number: 5 (lower is better)
Translates to: RHGHQANLGIHTAGQRGEFALFC*DLPPPT
Trigger: CGTGGGTGGAGGAAGATCCAAACAGAAAAGTGCAAA...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS GCA 90 bp CCAAGGGGTCCAGCTTCTCAGGAGGGAGTCACCATCTTCAGAGGGTaGGTCTACTTTGCCAATGAGAATTCACACCCAGGGGAATGGAAG +
Preference number: 5 (lower is better)
Translates to: PRGPASQEGVTIFRG*VYFANENSHPGEWK
Trigger: CTTCCATTCCCCTGGGTGTGAATTCTCATTGGCAAAGTAGACGCACCCTCTGAAGATGGTGACTCCCTCCTGAGAAGCTGGACCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428279.5
CDS-3UTR CAA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGGACATTACAGATCAATaGTATCTGGGATCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQDITDQ*YLGSQV
Trigger: GACTTGGGATCCCAGATACAATTGATCTGTAATGTC...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CATGTGTGGGCTGTGCAAGGGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGGCACCTAAAGAACTCTaGGCAACTTCTCCATGCTAC +
Preference number: 5 (lower is better)
Translates to: HVWAVQGTLQTEEATRELAPKEL*ATSPCY
Trigger: GTAGCATGGAGAAGTTGCCAAGAGTTCTTTAGGTGC...CAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp AGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAAAACGAAAGTGCTTTTaGAAGTCAGCCCTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: SAGGRRHGHQANLGIHTAKRKCF*KSALAR
Trigger: TCTAGCTAGGGCTGACTTCAAAAAGCACTTTCGTTT...TGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CAA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGGATGACTTCAAAACTTaGGAATCCTGGAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQDDFKT*ESWRIP
Trigger: AGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATC...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGCCAGAGACTGTGGAATaGGAGGATGTTCTGAATTTT +
Preference number: 5 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQPETVE*EDVLNF
Trigger: AAAATTCAGAACATCCTCCAATTCCACAGTCTCTGG...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp AGAGCAGAGACAGAGGAGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTTCAAGAAGTAGAGGTTaGCAATCCTTATACCACTGT +
Preference number: 5 (lower is better)
Translates to: RAETEECWGQATWPPGQPSRSRG*QSLYHC
Trigger: ACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGA...AGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACTCCTCTGTCTCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATGGGGTTTTGCCATGTaGGCTGGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKWGFAM*AGLVSN
Trigger: GTTCGAGACCAGCCCAGCCAACATGGCAAAACCCCA...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS TCA 90 bp TCAGGAGGGAGTCACCATCTTCAGAGGGTGCGTCTACTTTGCCAATaGGAATTCACACCCAGGGGAATGGAAGGATGGCCAAGGTCATGC +
Preference number: 5 (lower is better)
Translates to: SGGSHHLQRVRLLCQ*EFTPRGMEGWPRSC
Trigger: GCATGACCTTGGCCATCCTTCCATTCCCCTGGGTGTGAATTCTCATTGGCAAAGTAGACGCACCCTCTGAAGATGGTGACTCCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428279.5
CDS-3UTR CAA 90 bp GGAGACCAGCCTCCCAGATGTGCTCACCACCATCTCTGCAGTGGGCCTGACCAGACGATGAGCCTATCTTaGACTCCACTAAAGTGTATA +
Preference number: 5 (lower is better)
Translates to: GDQPPRCAHHHLCSGPDQTMSLS*TPLKCI
Trigger: TATACACTTTAGTGGAGTCAAAGATAGGCTCATCGT...CTGGTCAGGCCCACTGCAGAGATGGTGGTGAGCACATCTGGGAGGCTGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAGGACAGCGAGGGGAATCTCCATGCCTTTTCTaGGCAGTTCAAACATTCAGA +
Preference number: 5 (lower is better)
Translates to: RHGHQANLGIHTAGQRGESPCLF*AVQTFR
Trigger: TCTGAATGTTTGAACTGCCAAGAAAAGGCATGGAGA...TTCCCCTCGCTGTCCTGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp AGTGCTGGGGGCAGGCGACATGGCCACCAGGCCAACCTGGGAATTCACACAGCAAATAAGTACAGTCTATaGATCCGTGATGCATGCTGT +
Preference number: 5 (lower is better)
Translates to: SAGGRRHGHQANLGIHTANKYSL*IRDACC
Trigger: ACAGCATGCATCACGGATCAATAGACTGTACTTATT...TGCTGTGTGAATTCCCAGGTTGGCCTGGTGGCCATGTCGCCTGCCCCCAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS GCA 90 bp TGCTTTTTGAAGTCAGCCCTAGCTAGAGTTGTTAATTCAGGTCTGTaGCGCAGCAGAGTGACAACTCACATCTTGCCGGACGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: CFLKSALARVVNSGL*RSRVTTHILPDAPA
Trigger: AGCTGGGGCGTCCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACAGACCTGAATTAACAACTCTAGCTAGGGCTGACTTCAAAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS-3UTR CAA 90 bp GGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGTTCCTCCAAAGACGTAAAATTCTTGGAGAAGGCCTaGTCTTTTACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GHCRRRKPLGSCSSKDVKFLEKA*SFTKGS
Trigger: GGACCCCTTGGTAAAAGACAAGGCCTTCTCCAAGAA...TTTTACGTCTTTGGAGGAACAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp TGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGACATTCTTCCACGTGAGCCTCTCTTaGCAGTTTCTCCTTAGTGGC +
Preference number: 5 (lower is better)
Translates to: CLDEGDRRWTGMWYLTFFHVSLS*QFLLSG
Trigger: GCCACTAAGGAGAAACTGCAAAGAGAGGCTCACGTG...GAAGAATGTCAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTGCGCGGGCGCGCGATaGTCACATTCCTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHCAGAR*SHSCRS
Trigger: GGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCA...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409288.5
CDS GCA 90 bp CATCTAGAGCAGTCCAACACAAACACAGCCATCTCGGAGCTTTACTaGAGAGCGTTTTTGTTGCGGGAATGGACACTCAAGCCACACATC +
Preference number: 5 (lower is better)
Translates to: HLEQSNTNTAISELY*RAFLLREWTLKPHI
Trigger: GATGTGTGGCTTGAGTGTCCATTCCCGCAACAAAAACGCTCTGCAGTAAAGCTCCGAGATGGCTGTGTTTGTGTTGGACTGCTCTAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS-3UTR CAA 90 bp GTGGGCCTGACCAGAGAGAGAAGGCTGGAGAGGAAGTCGCCTCTTAGGGAAAGTGTAGATACAGGTGTCTaGCTGTCATCTTTATACCAA +
Preference number: 5 (lower is better)
Translates to: VGLTRERRLERKSPLRESVDTGV*LSSLYQ
Trigger: TTGGTATAAAGATGACAGCAAGACACCTGTATCTAC...ACTTTCCCTAAGAGGCGACTTCCTCTCCAGCCTTCTCTCTCTGGTCAGGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CATGTGTGGGCTGTGCAAGGGACATTGCAGACGGAGGAAGCCACTAGGGAGCTGCCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: HVWAVQGTLQTEEATRELPLKCI*SRSRGL
Trigger: CAAACCTCTACTTCTTGACAATATACACTTTAGTGG...CAGCTCCCTAGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGCCCACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CATTCTCTCCTGAACCAAAGCCACACAAGGCTTTTCACAACCGTATGGCTCCTACACGTGAGCCTCTCTTaGCAGTTTCTCCTTAGTGGC +
Preference number: 5 (lower is better)
Translates to: HSLLNQSHTRLFTTVWLLHVSLS*QFLLSG
Trigger: GCCACTAAGGAGAAACTGCAAAGAGAGGCTCACGTG...TAGGAGCCATACGGTTGTGAAAAGCCTTGTGTGGCTTTGGTTCAGGAGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTGGTGTCAGTCTCACTTaGCCTGCAGCACCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSGVSLT*PAAPLR
Trigger: CCTGAGAGGTGCTGCAGGCAAAGTGAGACTGACACC...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CTGTCTGTTGGAACAGCAGCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGTTTGCACTTTTCTGTTaGGATCTTCCTCCACCCACG +
Preference number: 5 (lower is better)
Translates to: LSVGTAAPEQHCSFKQAKFALFC*DLPPPT
Trigger: CGTGGGTGGAGGAAGATCCAAACAGAAAAGTGCAAA...CTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGCTGCTGTTCCAACAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp AAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTTGTTCATTGTGCGCGGGCGCGCGATaGTCACATTCCTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: KAKMTSKLWNPGESLCSLCAGAR*SHSCRS
Trigger: GGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCA...CAATGAACAAAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CATTCTCTCCTGAACCAAAGCCACACAAGGCTTTTCACAACCGTATGGCTCCTACAGTCTCTTGTTCTGTaGCTCACACTGGAGCGCAGT +
Preference number: 5 (lower is better)
Translates to: HSLLNQSHTRLFTTVWLLQSLVL*LTLERS
Trigger: ACTGCGCTCCAGTGTGAGCAACAGAACAAGAGACTG...TAGGAGCCATACGGTTGTGAAAAGCCTTGTGTGGCTTTGGTTCAGGAGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp CTGTCTGTTGGAACAGCAGCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: LSVGTAAPEQHCSFKQAKMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...CTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGCTGCTGTTCCAACAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTGTGACAACTCACATCTaGCCGGACGCCCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSVTTHI*PDAPAG
Trigger: ACCAGCTGGGGCGTCCGGCAAGATGTGAGTTGTCAC...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CAA 90 bp TTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCTTCTTGGAGAAGGCCTaGTCTTTTACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: FHCLISWAHNHRPCGFVFFLEKA*SFTKGS
Trigger: GGACCCCTTGGTAAAAGACAAGGCCTTCTCCAAGAA...GAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp CAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGCCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: QVYFHCLISWAHNHRPCGPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...CCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp AATTCCAGCTGCCATTCTACTTGTAATTCTTGGTCATCATCACCCCCACTCTCTCACGTGAGCCTCTCTTaGCAGTTTCTCCTTAGTGGC +
Preference number: 5 (lower is better)
Translates to: NSSCHSTCNSWSSSPPLSHVSLS*QFLLSG
Trigger: GCCACTAAGGAGAAACTGCAAAGAGAGGCTCACGTG...AGAGAGTGGGGGTGATGATGACCAAGAATTACAAGTAGAATGGCAGCTGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTGCTGTGCAAGGGACATaGCAGACGGAGGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSAVQGT*QTEEAT
Trigger: AGTGGCTTCCTCCGTCTGCAATGTCCCTTGCACAGC...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp AGGGAGCTGTTCCTCCAAAGACGTAAAATGCAGGATAATAACAAAGGACAGGATTGCCCTGGGCTGCTATaGACGTCATGGCTTATTCCC +
Preference number: 5 (lower is better)
Translates to: RELFLQRRKMQDNNKGQDCPGLL*TSWLIP
Trigger: GGGAATAAGCCATGACGTCAATAGCAGCCCAGGGCA...ATCCTGTCCTTTGTTATTATCCTGCATTTTACGTCTTTGGAGGAACAGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTTCTTCACGTTCCTaGCATTTATCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QVYFHCLISWAHNHRPCGFSSRS*HLSASR
Trigger: TCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAAA...CCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp TGTTTAGATGAAGGTGACCGTCGCTGGACTGGCATGTGGTACCTGACATTCTTCTCAAGAAGTAGAGGTTaGCAATCCTTACCACGCAAT +
Preference number: 5 (lower is better)
Translates to: CLDEGDRRWTGMWYLTFFSRSRG*QSLPRN
Trigger: ATTGCGTGGTAAGGATTGCAAACCTCTACTTCTTGA...GAAGAATGTCAGGTACCACATGCCAGTCCAGCGACGGTCACCTTCATCTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGTGACAACTCACATCTaGCCGGACGCCCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLVTTHI*PDAPAG
Trigger: ACCAGCTGGGGCGTCCGGCAAGATGTGAGTTGTCAC...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CAA 90 bp CTGTCTGTTGGAACAGCAGCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGTCCTGGAGAATCCCTTaGTTCATTGAAGTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LSVGTAAPEQHCSFKQAKSWRIP*FIEVSF
Trigger: AAAACTCACTTCAATGAACAAAGGGATTCTCCAGGA...CTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGCTGCTGTTCCAACAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp GCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACTCTTGGCAACTTCTCCAAGATGGGGAATAACTTaGCACTTTTCTGTTTGGATC +
Preference number: 5 (lower is better)
Translates to: ACNAIRQEAPKELLATSPRWGIT*HFSVWI
Trigger: GATCCAAACAGAAAAGTGCAAAGTTATTCCCCATCT...TGGAGAAGTTGCCAAGAGTTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp CTGTCTGTTGGAACAGCAGCTCCAGAACAGCACTGTTCCTTCAAGCAGGCAAAGACTTTCATATTCTTCTaGGAGAAGGCCTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LSVGTAAPEQHCSFKQAKTFIFF*EKALSF
Trigger: AAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAGT...CTTTGCCTGCTTGAAGGAACAGTGCTGTTCTGGAGCTGCTGTTCCAACAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp AGCATGAGGCATAACCTGGCCTGCAACGCCATAAGACAGGAGGCACCTAAAGAACAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: SMRHNLACNAIRQEAPKEQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...TTCTTTAGGTGCCTCCTGTCTTATGGCGTTGCAGGCCAGGTTATGCCTCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410023.6
ENST00000413623.5
CDS-3UTR CAA 90 bp TGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: CIWDPKSTSIVSLAGLTIMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...GATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp ATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTCCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: IVSLAGLTITGLVGLFSSPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...AGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTACATTCTTCCAGAACCTaGTCTTTGCAGACTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLHSSRT*SLQTVV
Trigger: GACCACAGTCTGCAAAGACAAGGTTCTGGAAGAATG...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCCATTCTTCCAGAACCTaGTCTTTGCAGACTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VKSPDQRIAPCFCLMNLIHSSRT*SLQTVV
Trigger: GACCACAGTCTGCAAAGACAAGGTTCTGGAAGAATG...GATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CAA 90 bp CGATTCTGGCATTTTCTCATAGTCTTGGATTTTCTCCAGCTCAAGCAGGACAACGCACCTAAAGAACTCTaGGCAACTTCTCCATGCTAC +
Preference number: 5 (lower is better)
Translates to: RFWHFLIVLDFLQLKQDNAPKEL*ATSPCY
Trigger: GTAGCATGGAGAAGTTGCCAAGAGTTCTTTAGGTGC...GTTGTCCTGCTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATGCCAGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp ACTCTTAAAACTGTGCTTGTGTCCTGCAATCGGTGGCATATAAATTTGGCTTTCGGAGAAAGTGGGGTTTaGGAGATGGCTGTGTCACAG +
Preference number: 5 (lower is better)
Translates to: TLKTVLVSCNRWHINLAFGESGV*EMAVSQ
Trigger: CTGTGACACAGCCATCTCCAAAACCCCACTTTCTCC...GAAAGCCAAATTTATATGCCACCGATTGCAGGACACAAGCACAGTTTTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409589.5
CDS-3UTR CAA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTCTCTTAAAACTGTGCTaGTGTCCTGCAATCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLLLKLC*CPAIGG
Trigger: GCCACCGATTGCAGGACACAAGCACAGTTTTAAGAG...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCTTCTTGGAGAAGGCCTaGTCTTTTACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSFLEKA*SFTKGS
Trigger: GGACCCCTTGGTAAAAGACAAGGCCTTCTCCAAGAA...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp TCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCGTAGATACAGGTGTCTaGCTGTCATCTTTATACCAA +
Preference number: 5 (lower is better)
Translates to: SIVSLAGLTITGLVGLFSVDTGV*LSSLYQ
Trigger: TTGGTATAAAGATGACAGCAAGACACCTGTATCTAC...GGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp GCACTGGGTCATCTTCATCAATTACTGACCCATTCCACTTCCAGTAAGCAATGTATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: ALGHLHQLLTHSTSSKQCMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...ACATTGCTTACTGGAAGTGGAATGGGTCAGTAATTGATGAAGATGACCCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCCCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp ATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTGACATTACAGATCAATaGTATCTGGGATCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: IVSLAGLTITGLVGLFSSDITDQ*YLGSQV
Trigger: GACTTGGGATCCCAGATACAATTGATCTGTAATGTC...AGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGATGTTACATGTGCAAATaGCTCCTGGAAGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRCYMCK*LLEGSE
Trigger: CTCACTGCCTTCCAGGAGCAATTTGCACATGTAACA...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTCTTGGAGAAGGCCTaGTCTTTTACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: NCETYTPMPRSSRKMESTFLEKA*SFTKGS
Trigger: GGACCCCTTGGTAAAAGACAAGGCCTTCTCCAAGAA...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AAGTCAAAGGAAGTTCACGGGGAACTAGGAATGTGTCTTCTTCCTCCAGAATTCTTTTCTTCACGTTCCTaGCATTTATCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KSKEVHGELGMCLLPPEFFSSRS*HLSASR
Trigger: TCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAAA...GAATTCTGGAGGAAGAAGACACATTCCTAGTTCCCCGTGAACTTCCTTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CCATCTGTAGACGGTGGCTATTTCCTTCTTGCCCTTTCTTCTAGTTCGCTGTCTCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: PSVDGGYFLLALSSSSLSQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...AGACAGCGAACTAGAAGAAAGGGCAAGAAGGAAATAGCCACCGTCTACAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CATTCTCTCCTGAACCAAAGCCACACAAGGCTTTTCACAACCGTATGGCTCCTACCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: HSLLNQSHTRLFTTVWLLPLKCI*SRSRGL
Trigger: CAAACCTCTACTTCTTGACAATATACACTTTAGTGG...TAGGAGCCATACGGTTGTGAAAAGCCTTGTGTGGCTTTGGTTCAGGAGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp TTCCATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCACGATGAGCCTATCTTaGACTCCACTAAAGTGTATA +
Preference number: 5 (lower is better)
Translates to: FHCLISWAHNHRPCGFVFTMSLS*TPLKCI
Trigger: TATACACTTTAGTGGAGTCAAAGATAGGCTCATCGT...GAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp GACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCGATTCTGGCATTCCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: DQRIAPCFCLMNLIDSGIPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...AATGCCAGAATCGATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AATTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAGACATTACAGATCAATaGTATCTGGGATCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: NCIWDPKSTSIVSLAGLTDITDQ*YLGSQV
Trigger: GACTTGGGATCCCAGATACAATTGATCTGTAATGTC...TGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp CATTCTCTCCTGAACCAAAGCCACACAAGGCTTTTCACAACCGTATGGCTCCTAATACCATGTGTATTCTaGGCAAAACAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: HSLLNQSHTRLFTTVWLLIPCVF*AKQVNG
Trigger: TCCATTTACCTGTTTTGCCAAGAATACACATGGTAT...TAGGAGCCATACGGTTGTGAAAAGCCTTGTGTGGCTTTGGTTCAGGAGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTCATTCTTCCAGAACCTaGTCTTTGCAGACTGTGGTC +
Preference number: 5 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSHSSRT*SLQTVV
Trigger: GACCACAGTCTGCAAAGACAAGGTTCTGGAAGAATG...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp TCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGGAGAAAGTGGGGTTTaGGAGATGGCTGTGTCACAG +
Preference number: 5 (lower is better)
Translates to: SYTSEEVLKIVKHIPLCHGESGV*EMAVSQ
Trigger: CTGTGACACAGCCATCTCCAAAACCCCACTTTCTCC...GTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CAA 90 bp TCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACCTCCGTTCTTCATCCTaGGGGCATTTGGGAATGGCT +
Preference number: 5 (lower is better)
Translates to: SYTSEEVLKIVKHIPLCHLRSSS*GHLGMA
Trigger: AGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAG...GTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CAA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATCCAGAGACTGTGGAATaGGAGGATGTTCTGAATTTT +
Preference number: 5 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNPETVE*EDVLNF
Trigger: AAAATTCAGAACATCCTCCAATTCCACAGTCTCTGG...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS TCA 90 bp CAAGAAGTAGAGGTTTGCAATCCTTACCACGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGGAACAAACCAAAGTTTCTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: QEVEVCNPYHAIVMS*ILHLSRNKPKFLFV
Trigger: CACAAAGAGAAACTTTGGTTTGTTCCTGCTAAGGTGGAGGATTCAGGACATTACTATTGCGTGGTAAGGATTGCAAACCTCTACTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTATTCTTGGAGAAGGCCTaGTCTTTTACCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLFLEKA*SFTKGS
Trigger: GGACCCCTTGGTAAAAGACAAGGCCTTCTCCAAGAA...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp TGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAATCCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: CIWDPKSTSIVSLAGLTIQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...GATTGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp AATTGTATCTGGGATCCCAAGTCTACTTCCATTGTCTCATTAGCTGGGCTCACAACGATGAGCCTATCTTaGACTCCACTAAAGTGTATA +
Preference number: 5 (lower is better)
Translates to: NCIWDPKSTSIVSLAGLTTMSLS*TPLKCI
Trigger: TATACACTTTAGTGGAGTCAAAGATAGGCTCATCGT...TGTGAGCCCAGCTAATGAGACAATGGAAGTAGACTTGGGATCCCAGATACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp ATTGTCTCATTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTATACCATGTGTATTCTaGGCAAAACAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: IVSLAGLTITGLVGLFSSIPCVF*AKQVNG
Trigger: TCCATTTACCTGTTTTGCCAAGAATACACATGGTAT...AGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAATGAGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATCATTTTCTCATAGTCTaGGATTTTCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNHFLIV*DFLQLK
Trigger: CTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATG...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp TGTGTAAAGTCCCCTGACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTACATTTTCTCATAGTCTaGGATTTTCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: CVKSPDQRIAPCFCLMNLHFLIV*DFLQLK
Trigger: CTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATG...TAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTCAGGGGACTTTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGACAGAGAGATGACTTCAAAACTTaGGAATCCTGGAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: INLCYMCKLLLEGSEGQRDDFKT*ESWRIP
Trigger: AGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATC...TCTCTGTCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp GCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCTCTATGCTTTTCAGCTCAAGAAGTAGAGGTTaGCAATCCTTATACCACTGT +
Preference number: 5 (lower is better)
Translates to: AQVCVGCMTSIVPSMLFSSRSRG*QSLYHC
Trigger: ACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGA...GCTGAAAAGCATAGAGGGAACTATACTTGTCATGCATCCTACACATACTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422532.2
CDS-3UTR CAA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGAATTGACTCAAGCAGCTaGAGAAGGAGCCTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERIDSSS*RRSLGS
Trigger: ACTGCCAAGGCTCCTTCTCAAGCTGCTTGAGTCAAT...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp GTTTGGATCTTCCTCCACCCACGCTTATCCATTGATTCTTGTCCCTCCTTAAATACTTTCATATTCTTCTaGGAGAAGGCCTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: VWIFLHPRLSIDSCPSLNTFIFF*EKALSF
Trigger: AAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAGT...ATTTAAGGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTGAGGGATTTTCTTCACGTTCCTaGCATTTATCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HYINLCYMCKLLLEGSEGFSSRS*HLSASR
Trigger: TCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAAA...TCCCTCACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp TTAGCTGGGCTCACAATCACAGGCCTTGTGGGTTTGTTTTCCTCTAGAGTAATACAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: LAGLTITGLVGLFSSRVIQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...TATTACTCTAGAGGAAAACAAACCCACAAGGCCTGTGATTGTGAGCCCAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp AGGATATTGCTTGCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCTCTGTAGATACAGGTGTCTaGCTGTCATCTTTATACCAA +
Preference number: 5 (lower is better)
Translates to: RILLAQVCVGCMTSIVPSVDTGV*LSSLYQ
Trigger: TTGGTATAAAGATGACAGCAAGACACCTGTATCTAC...AGAGGGAACTATACTTGTCATGCATCCTACACATACTTGGGCAAGCAATATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: CETYTPMPRSSRKMESTFMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: NCETYTPMPRSSRKMESTMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACACCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: NCETYTPMPRSSRKMESTPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GTCTTCTTCCTCCAGAATTCAACCCTTGGAAGATGGGGAATAACTTTGCACTTTTCCTGGAGAATCCCTTaGTTCATTGAAGTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: VFFLQNSTLGRWGITLHFSWRIP*FIEVSF
Trigger: AAAACTCACTTCAATGAACAAAGGGATTCTCCAGGA...AAAGTGCAAAGTTATTCCCCATCTTCCAAGGGTTGAATTCTGGAGGAAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp ATAAAGCATTACATAAATCTATGTTACATGTGCAAATTGCTCCTGGAAGGCAGTCTCTTAAAACTGTGCTaGTGTCCTGCAATCGGTGGC +
Preference number: 5 (lower is better)
Translates to: IKHYINLCYMCKLLLEGSLLKLC*CPAIGG
Trigger: GCCACCGATTGCAGGACACAAGCACAGTTTTAAGAG...ACTGCCTTCCAGGAGCAATTTGCACATGTAACATAGATTTATGTAATGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp CTCCTGTGGAAAGCTAAGATGACTTCAAAACTTTGGAATCCTGGAGAATCCCTTAATAAGTACAGTCTATaGATCCGTGATGCATGCTGT +
Preference number: 5 (lower is better)
Translates to: LLWKAKMTSKLWNPGESLNKYSL*IRDACC
Trigger: ACAGCATGCATCACGGATCAATAGACTGTACTTATT...AAGGGATTCTCCAGGATTCCAAAGTTTTGAAGTCATCTTAGCTTTCCACAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp GACCAGCGGATAGCCCCATGTTTCTGCTTAATGAATTTAATCGATTCTGGCATTACTTTCATATTCTTCTaGGAGAAGGCCTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: DQRIAPCFCLMNLIDSGITFIFF*EKALSF
Trigger: AAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAGT...AATGCCAGAATCGATTAAATTCATTAAGCAGAAACATGGGGCTATCCGCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTTTCTTCACGTTCCTaGCATTTATCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHFSSRS*HLSASR
Trigger: TCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAAA...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp TCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTACCGGGTAATAGGATATaGCTTGCCCAAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: SEEVLKIVKHIPLCHDLLPGNRI*LAQVCV
Trigger: TACACATACTTGGGCAAGCAATATCCTATTACCCGG...TAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATGACATTACAGATCAATaGTATCTGGGATCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHDITDQ*YLGSQV
Trigger: GACTTGGGATCCCAGATACAATTGATCTGTAATGTC...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp CACTCTCTGGCCAATTTTGTCACTAACCTAAGTTTCCAAATTGGCTTGCTTTCTAGATGGGGAATAACTTaGCACTTTTCTGTTTGGATC +
Preference number: 5 (lower is better)
Translates to: HSLANFVTNLSFQIGLLSRWGIT*HFSVWI
Trigger: GATCCAAACAGAAAAGTGCAAAGTTATTCCCCATCT...AGAAAGCAAGCCAATTTGGAAACTTAGGTTAGTGACAAAATTGGCCAGAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409589.5
ENST00000410023.6
CDS-3UTR CAA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTGTCGAGACAAATGCCTaGGAATTTTCCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: CETYTPMPRSSRKMESTFVETNA*EFSLNW
Trigger: CCAGTTTAAGGAAAATTCCAAGGCATTTGTCTCGAC...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGTTAAGAGACAGTCTCTaGTTCTGTTGCTCACACTGG +
Preference number: 5 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWLRDSL*FCCSHW
Trigger: CCAGTGTGAGCAACAGAACAAGAGACTGTCTCTTAA...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGTTTTCTTCACGTTCCTaGCATTTATCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWFSSRS*HLSASR
Trigger: TCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAAA...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATTTTCTTCACGTTCCTaGCATTTATCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERFSSRS*HLSASR
Trigger: TCTGGAGGCTGATAAATGCAAGGAACGTGAAGAAAA...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATGTAGATACAGGTGTCTaGCTGTCATCTTTATACCAA +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHVDTGV*LSSLYQ
Trigger: TTGGTATAAAGATGACAGCAAGACACCTGTATCTAC...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTGTAGATACAGGTGTCTaGCTGTCATCTTTATACCAA +
Preference number: 5 (lower is better)
Translates to: CETYTPMPRSSRKMESTFVDTGV*LSSLYQ
Trigger: TTGGTATAAAGATGACAGCAAGACACCTGTATCTAC...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp CTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGT +
Preference number: 5 (lower is better)
Translates to: LKIVKHIPLCHDLLERWNMNPGG*FCRYRC
Trigger: ACACCTGTATCTACAGAACAAGCCTCCAGGATTCAT...ATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AATAGGATATTGCTTGCCCAAGTATGTGTAGGATGCATGACAAGTATAGTTCCCCCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: NRILLAQVCVGCMTSIVPPLKCI*SRSRGL
Trigger: CAAACCTCTACTTCTTGACAATATACACTTTAGTGG...GGGAACTATACTTGTCATGCATCCTACACATACTTGGGCAAGCAATATCCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTACGATGAGCCTATCTTaGACTCCACTAAAGTGTATA +
Preference number: 5 (lower is better)
Translates to: CETYTPMPRSSRKMESTFTMSLS*TPLKCI
Trigger: TATACACTTTAGTGGAGTCAAAGATAGGCTCATCGT...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAACGATGAGCCTATCTTaGACTCCACTAAAGTGTATA +
Preference number: 5 (lower is better)
Translates to: NCETYTPMPRSSRKMESTTMSLS*TPLKCI
Trigger: TATACACTTTAGTGGAGTCAAAGATAGGCTCATCGT...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GGGATGTGTATGGAAAATACAAGCAGATGGAAAGTTCTCCAAGAATATGTCTCCATACCATGTGTATTCTaGGCAAAACAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: GMCMENTSRWKVLQEYVSIPCVF*AKQVNG
Trigger: TCCATTTACCTGTTTTGCCAAGAATACACATGGTAT...GGAGACATATTCTTGGAGAACTTTCCATCTGCTTGTATTTTCCATACACATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410023.6
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTCAAGAAGTAGAGGTTaGCAATCCTTATACCACTGT +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHSRSRG*QSLYHC
Trigger: ACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGA...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTTCAAGAAGTAGAGGTTaGCAATCCTTATACCACTGT +
Preference number: 5 (lower is better)
Translates to: CETYTPMPRSSRKMESTFSRSRG*QSLYHC
Trigger: ACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGA...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACAACTTTCATATTCTTCTaGGAGAAGGCCTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: NCETYTPMPRSSRKMESTTFIFF*EKALSF
Trigger: AAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAGT...TGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGAGTAGATACAGGTGTCTaGCTGTCATCTTTATACCAA +
Preference number: 5 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERVDTGV*LSSLYQ
Trigger: TTGGTATAAAGATGACAGCAAGACACCTGTATCTAC...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp TGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATTTCCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: CETYTPMPRSSRKMESTFPLKCI*SRSRGL
Trigger: CAAACCTCTACTTCTTGACAATATACACTTTAGTGG...AAATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCAACGATGAGCCTATCTTaGACTCCACTAAAGTGTATA +
Preference number: 5 (lower is better)
Translates to: KIVKHIPLCHDLLERWNPTMSLS*TPLKCI
Trigger: TATACACTTTAGTGGAGTCAAAGATAGGCTCATCGT...TGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp ATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATCCACATATACCATGTGTATTCTaGGCAAAACAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: IVKHIPLCHDLLERWNPHIPCVF*AKQVNG
Trigger: TCCATTTACCTGTTTTGCCAAGAATACACATGGTAT...ATGTGGATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGACATTTTCTCATAGTCTaGGATTTTCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERHFLIV*DFLQLK
Trigger: CTTGAGCTGGAGAAAATCCAAGACTATGAGAAAATG...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS-3UTR CAA 90 bp TCATCATACACTTCTGAAGAGGTTCTTAAAATTGTGAAACATATACCCCTATGCAAACGAAAGTGCTTTTaGAAGTCAGCCCTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: SSYTSEEVLKIVKHIPLCKRKCF*KSALAR
Trigger: TCTAGCTAGGGCTGACTTCAAAAAGCACTTTCGTTT...GCATAGGGGTATATGTTTCACAATTTTAAGAACCTCTTCAGAAGTGTATGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409329.5
CDS-3UTR CAA 90 bp GAGGTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATCAAGAAGTAGAGGTTaGCAATCCTTATACCACTGT +
Preference number: 5 (lower is better)
Translates to: EVLKIVKHIPLCHDLLERSRSRG*QSLYHC
Trigger: ACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGA...TCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp GTTCTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: VLKIVKHIPLCHDLLERWQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...CCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp AGAGTAATAAATTCTATTACCCGGGTAATAGGATATTGCTTGCCCAAGTATGTGCCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: RVINSITRVIGYCLPKYVPLKCI*SRSRGL
Trigger: CAAACCTCTACTTCTTGACAATATACACTTTAGTGG...CACATACTTGGGCAAGCAATATCCTATTACCCGGGTAATAGAATTTATTACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413623.5
ENST00000422532.2
CDS-3UTR CAA 90 bp CTTAAAATTGTGAAACATATACCCCTATGCCACGATCTTCTAGAAAGATGGAATACTTTCATATTCTTCTaGGAGAAGGCCTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LKIVKHIPLCHDLLERWNTFIFF*EKALSF
Trigger: AAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAGT...ATTCCATCTTTCTAGAAGATCGTGGCATAGGGGTATATGTTTCACAATTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000424272.5
CDS-3UTR CAA 90 bp TCTAGAGTAATAAATTCTATTACCCGGGTAATAGGATATTGCTTGCCCAAGTATACTTTCATATTCTTCTaGGAGAAGGCCTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SRVINSITRVIGYCLPKYTFIFF*EKALSF
Trigger: AAAAGACAAGGCCTTCTCCAAGAAGAATATGAAAGT...ATACTTGGGCAAGCAATATCCTATTACCCGGGTAATAGAATTTATTACTCTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS-3UTR CAA 90 bp TACCACTCCTGTTTAATTGTATCAGTTGTAAAGCAACTGTTGGGTTTAACTAGTCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: YHSCLIVSVVKQLLGLTSQVIVP*CSFGLR
Trigger: TCTTAACCCAAATGAACACAAAGGCACTATAACTTG...ACTAGTTAAACCCAACAGTTGCTTTACAACTGATACAATTAAACAGGAGTGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424272.5
CDS GCA 72 bp GTGCTTCGGTGCGCGGGCGCGCGATTGTCACATTCCTaGCGCTCCCTGGGGCGCGCGGGGCAGGCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: VLRCAGARLSHS*RSLGRAGQAGA
Trigger: GGCGCCGGCCTGCCCCGCGCGCCCCAGGGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCACCGAAGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409288.5
ENST00000410023.6
CDS CAA 90 bp GCCCTAGGAGCCGAGCGAGGAGTGCTTCGGTGCGCGGGCGCGCGATaGTCACATTCCTGCCGCTCCCTGGGGCGCGCGGGGCAGGCCGGC +
Preference number: 6 (lower is better)
Translates to: ALGAERGVLRCAGAR*SHSCRSLGRAGQAG
Trigger: GCCGGCCTGCCCCGCGCGCCCCAGGGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCACCGAAGCACTCCTCGCTCGGCTCCTAGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409288.5
ENST00000410023.6
CDS CAA 72 bp GCCGAGCGAGGAGTGCTTCGGTGCGCGGGCGCGCGATaGTCACATTCCTGCCGCTCCCTGGGGCGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: AERGVLRCAGAR*SHSCRSLGRAG
Trigger: CCCCGCGCGCCCCAGGGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCACCGAAGCACTCCTCGCTCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409288.5
ENST00000410023.6
CDS GCA 72 bp GCGAGAGCCCTAGGAGCCGAGCGAGGAGTGCTTCGGTaGGCGGGCGCGCGATTGTCACATTCCTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: ARALGAERGVLR*AGARLSHSCRS
Trigger: GGAGCGGCAGGAATGTGACAATCGCGCGCCCGCGCACCGAAGCACTCCTCGCTCGGCTCCTAGGGCTCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409288.5
ENST00000410023.6
CDS CCA 72 bp TCAGATCCCGAAGCAAACGCTCGCCAGAGCGACCTCTaGAGCTTGGTGCCTGGCCAGGGGCTCTCTCCGACT +
Preference number: 6 (lower is better)
Translates to: SDPEANARQSDL*SLVPGQGLSPT
Trigger: AGTCGGAGAGAGCCCCTGGCCAGGCACCAAGCTCCAGAGGTCGCTCTGGCGAGCGTTTGCTTCGGGATCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CAA 90 bp GGCTCTACTACCCCCATGGAGCCTGGCTGCGACCCGCGAATTGAGTaGGCGACTCCAGGGCATCAGATCCCGAAGCAAACGCTCGCCAGA +
Preference number: 6 (lower is better)
Translates to: GSTTPMEPGCDPRIE*ATPGHQIPKQTLAR
Trigger: TCTGGCGAGCGTTTGCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CAA 90 bp GACCTGGCTCTACTACCCCCATGGAGCCTGGCTGCGACCCGCGAATaGAGTTGGCGACTCCAGGGCATCAGATCCCGAAGCAAACGCTCG +
Preference number: 6 (lower is better)
Translates to: DLALLPPWSLAATRE*SWRLQGIRSRSKRS
Trigger: CGAGCGTTTGCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS GCA 72 bp CTACGACCTGGCTCTACTACCCCCATGGAGCCTGGCTaGGACCCGCGAATTGAGTTGGCGACTCCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: LRPGSTTPMEPG*DPRIELATPGH
Trigger: ATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCCAGGTCGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CAA 72 bp ACCCCCATGGAGCCTGGCTGCGACCCGCGAATTGAGTaGGCGACTCCAGGGCATCAGATCCCGAAGCAAACG +
Preference number: 6 (lower is better)
Translates to: TPMEPGCDPRIE*ATPGHQIPKQT
Trigger: CGTTTGCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CAA 72 bp CTACTACCCCCATGGAGCCTGGCTGCGACCCGCGAATaGAGTTGGCGACTCCAGGGCATCAGATCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: LLPPWSLAATRE*SWRLQGIRSRS
Trigger: GCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS TCA 72 bp TACTACCCCCATGGAGCCTGGCTGCGACCCGCGAATTaGGTTGGCGACTCCAGGGCATCAGATCCCGAAGCA +
Preference number: 6 (lower is better)
Translates to: YYPHGAWLRPAN*VGDSRASDPEA
Trigger: TGCTTCGGGATCTGATGCCCTGGAGTCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CCA 72 bp CTACCTAGCCACTACGACCTGGCTCTACTACCCCCATaGAGCCTGGCTGCGACCCGCGAATTGAGTTGGCGA +
Preference number: 6 (lower is better)
Translates to: LPSHYDLALLPP*SLAATRELSWR
Trigger: TCGCCAACTCAATTCGCGGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCCAGGTCGTAGTGGCTAGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CCA 72 bp ATCTTCAGAGGGTGCGTCTACCTAGCCACTACGACCTaGCTCTACTACCCCCATGGAGCCTGGCTGCGACCC +
Preference number: 6 (lower is better)
Translates to: IFRGCVYLATTT*LYYPHGAWLRP
Trigger: GGGTCGCAGCCAGGCTCCATGGGGGTAGTAGAGCCAGGTCGTAGTGGCTAGGTAGACGCACCCTCTGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442590.5
CDS CAA 72 bp TCAGGTCTGTGCCGCAGCAGAGTGACAACTCACATCTaGCCGGACGCCCCAGCTGGTACGGAGGCTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SGLCRSRVTTHI*PDAPAGTEAQR
Trigger: CCTTTGAGCCTCCGTACCAGCTGGGGCGTCCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACAGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CCA 72 bp ACCGTCTCCGTTCTTCATCCTTGGGGCATTTGGGAATaGCTGGCCTCCCAGGAGGTGGAGAATGTCGGGGTA +
Preference number: 6 (lower is better)
Translates to: TVSVLHPWGIWE*LASQEVENVGV
Trigger: TACCCCGACATTCTCCACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CCA 72 bp GCGTCTACCGTCTCCGTTCTTCATCCTTGGGGCATTTaGGAATGGCTGGCCTCCCAGGAGGTGGAGAATGTC +
Preference number: 6 (lower is better)
Translates to: ASTVSVLHPWGI*EWLASQEVENV
Trigger: GACATTCTCCACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAGACGGTAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CAA 72 bp TTCAGAGGGTGCGTCTACCGTCTCCGTTCTTCATCCTaGGGGCATTTGGGAATGGCTGGCCTCCCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: FRGCVYRLRSSS*GHLGMAGLPGG
Trigger: ACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAGACGGTAGACGCACCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CAA 90 bp TTCAGAGGGTGCGTCTACCGTCTCCGTTCTTCATCCTTGGGGCATTaGGGAATGGCTGGCCTCCCAGGAGGTGGAGAATGTCGGGGTAAT +
Preference number: 6 (lower is better)
Translates to: FRGCVYRLRSSSLGH*GMAGLPGGGECRGN
Trigger: ATTACCCCGACATTCTCCACCTCCTGGGAGGCCAGCCATTCCCAAATGCCCCAAGGATGAAGAACGGAGACGGTAGACGCACCCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS TCA 72 bp GGGCTTTCCCCCTCCACTTCGCTAGTCTTCAGCAAGTaGCTGGCCCCTCCAGCTTGTTTGGAGGTCTTCATG +
Preference number: 6 (lower is better)
Translates to: GLSPSTSLVFSK*LAPPACLEVFM
Trigger: CATGAAGACCTCCAAACAAGCTGGAGGGGCCAGTCACTTGCTGAAGACTAGCGAAGTGGAGGGGGAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450319.5
CDS CCA 72 bp CAGAGTGACAACTCACATCTTGCCGGACGCCCCAGCTaGTACGGAGGCTCAAAGGAAGGAGAAAGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: QSDNSHLAGRPS*YGGSKEGESGV
Trigger: AACCCCACTTTCTCCTTCCTTTGAGCCTCCGTACCAGCTGGGGCGTCCGGCAAGATGTGAGTTGTCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CAA 90 bp GTTGTTAATTCAGGTCTGTGCCGCAGCAGAGTGACAACTCACATCTaGCCGGACGCCCCAGCTGGTACGGAGGCTCAAAGGAAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: VVNSGLCRSRVTTHI*PDAPAGTEAQRKEK
Trigger: TTTCTCCTTCCTTTGAGCCTCCGTACCAGCTGGGGCGTCCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACAGACCTGAATTAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS TCA 72 bp CTAGAGTTGTTAATTCAGGTCTGTGCCGCAGCAGAGTaGCAACTCACATCTTGCCGGACGCCCCAGCTGGTA +
Preference number: 6 (lower is better)
Translates to: LELLIQVCAAAE*QLTSCRTPQLV
Trigger: TACCAGCTGGGGCGTCCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACAGACCTGAATTAACAACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CAA 90 bp CAGCTTCTCAGGAGGGAGTCACCATCTTCAGAGGGTGCGTCTACTTaGCCAATGAGAATTCACACCCAGGGGAATGGAAGGATGGCCAAG +
Preference number: 6 (lower is better)
Translates to: QLLRRESPSSEGAST*PMRIHTQGNGRMAK
Trigger: CTTGGCCATCCTTCCATTCCCCTGGGTGTGAATTCTCATTGGCAAAGTAGACGCACCCTCTGAAGATGGTGACTCCCTCCTGAGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428279.5
CDS TCA 72 bp AGAGGTAATCACACCTCCTCCATGGGTGGTGAAGGCTaGGGAAAAACGCTTTGTCCAGGAGGGTTGTGCATC +
Preference number: 6 (lower is better)
Translates to: RGNHTSSMGGEG*GKTLCPGGLCI
Trigger: GATGCACAACCCTCCTGGACAAAGCGTTTTTCCTCAGCCTTCACCACCCATGGAGGAGGTGTGATTACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS CAA 72 bp AGGAGGGAGTCACCATCTTCAGAGGGTGCGTCTACTTaGCCAATGAGAATTCACACCCAGGGGAATGGAAGG +
Preference number: 6 (lower is better)
Translates to: RRESPSSEGAST*PMRIHTQGNGR
Trigger: CCTTCCATTCCCCTGGGTGTGAATTCTCATTGGCAAAGTAGACGCACCCTCTGAAGATGGTGACTCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428279.5
CDS TCA 72 bp AGTCACCATCTTCAGAGGGTGCGTCTACTTTGCCAATaGGAATTCACACCCAGGGGAATGGAAGGATGGCCA +
Preference number: 6 (lower is better)
Translates to: SHHLQRVRLLCQ*EFTPRGMEGWP
Trigger: TGGCCATCCTTCCATTCCCCTGGGTGTGAATTCTCATTGGCAAAGTAGACGCACCCTCTGAAGATGGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428279.5
CDS TCA 72 bp ATGACTTGCCTTGGTTGGGTCCCAGTCTCCTTTCTGTaGATAGAGGTAATCACACCTCCTCCATGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: MTCLGWVPVSFL*IEVITPPPWVV
Trigger: CACCACCCATGGAGGAGGTGTGATTACCTCTATTCACAGAAAGGAGACTGGGACCCAACCAAGGCAAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS GCA 72 bp AAGTCAGCCCTAGCTAGAGTTGTTAATTCAGGTCTGTaGCGCAGCAGAGTGACAACTCACATCTTGCCGGAC +
Preference number: 6 (lower is better)
Translates to: KSALARVVNSGL*RSRVTTHILPD
Trigger: GTCCGGCAAGATGTGAGTTGTCACTCTGCTGCGGCACAGACCTGAATTAACAACTCTAGCTAGGGCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409329.5
ENST00000409589.5
CDS CAA 72 bp AACACAGCCATCTCGGAGCTTTACTGCAGAGCGTTTTaGTTGCGGGAATGGACACTCAAGCCACACATCTGG +
Preference number: 6 (lower is better)
Translates to: NTAISELYCRAF*LREWTLKPHIW
Trigger: CCAGATGTGTGGCTTGAGTGTCCATTCCCGCAACAAAAACGCTCTGCAGTAAAGCTCCGAGATGGCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS GCA 72 bp AGCCCCGCAGTCTGGTCTATGAGCTCTTTCTGTGACTaGGTGAAGTGTGTTTTAAGTCTTGGAGAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: SPAVWSMSSFCD*VKCVLSLGEGL
Trigger: AAGGCCTTCTCCAAGACTTAAAACACACTTCACGCAGTCACAGAAAGAGCTCATAGACCAGACTGCGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430171.1
CDS GCA 72 bp CAGCCATCTCGGAGCTTTACTGCAGAGCGTTTTTGTTaGGGGAATGGACACTCAAGCCACACATCTGGTAAA +
Preference number: 6 (lower is better)
Translates to: QPSRSFTAERFC*GNGHSSHTSGK
Trigger: TTTACCAGATGTGTGGCTTGAGTGTCCATTCCCGCAACAAAAACGCTCTGCAGTAAAGCTCCGAGATGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS GCA 72 bp CAGTCCAACACAAACACAGCCATCTCGGAGCTTTACTaGAGAGCGTTTTTGTTGCGGGAATGGACACTCAAG +
Preference number: 6 (lower is better)
Translates to: QSNTNTAISELY*RAFLLREWTLK
Trigger: CTTGAGTGTCCATTCCCGCAACAAAAACGCTCTGCAGTAAAGCTCCGAGATGGCTGTGTTTGTGTTGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS TCA 72 bp TTGAAGCCCCGCAGTCTGGTCTATGAGCTCTTTCTGTaGCTGCGTGAAGTGTGTTTTAAGTCTTGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: LKPRSLVYELFL*LREVCFKSWRR
Trigger: CCTTCTCCAAGACTTAAAACACACTTCACGCAGTCACAGAAAGAGCTCATAGACCAGACTGCGGGGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430171.1
CDS CCA 72 bp TTCTTTGCTCTGTGGTCTGAAGCAAATGACTTGCCTTaGTTGGGTCCCAGTCTCCTTTCTGTGAATAGAGGT +
Preference number: 6 (lower is better)
Translates to: FFALWSEANDLP*LGPSLLSVNRG
Trigger: ACCTCTATTCACAGAAAGGAGACTGGGACCCAACCAAGGCAAGTCATTTGCTTCAGACCACAGAGCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS TCA 72 bp ACACAAGTCCTCCGTCTCCACGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGGAACAAACCAAAGTTT +
Preference number: 6 (lower is better)
Translates to: TQVLRLHAIVMS*ILHLSRNKPKF
Trigger: AAACTTTGGTTTGTTCCTGCTAAGGTGGAGGATTCAGGACATTACTATTGCGTGGAGACGGAGGACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422532.2
CDS CAA 72 bp TTTGCTCTGTGGTCTGAAGCAAATGACTTGCCTTGGTaGGGTCCCAGTCTCCTTTCTGTGAATAGAGGTAAT +
Preference number: 6 (lower is better)
Translates to: FALWSEANDLPW*GPSLLSVNRGN
Trigger: ATTACCTCTATTCACAGAAAGGAGACTGGGACCCAACCAAGGCAAGTCATTTGCTTCAGACCACAGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452403.5
CDS TCA 72 bp GAGGTTTGCAATCCTTACCACGCAATAGTAATGTCCTaGATCCTCCACCTTAGCAGGAACAAACCAAAGTTT +
Preference number: 6 (lower is better)
Translates to: EVCNPYHAIVMS*ILHLSRNKPKF
Trigger: AAACTTTGGTTTGTTCCTGCTAAGGTGGAGGATTCAGGACATTACTATTGCGTGGTAAGGATTGCAAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS CAA 72 bp CACCTTAGCAGGAACAAACCAAAGTTTCTCTTTGTGTaGATGAATCCTGGAGGCTTGTTCTGTAGATACAGG +
Preference number: 6 (lower is better)
Translates to: HLSRNKPKFLFV*MNPGGLFCRYR
Trigger: CCTGTATCTACAGAACAAGCCTCCAGGATTCATCAACACAAAGAGAAACTTTGGTTTGTTCCTGCTAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409589.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
ENST00000430171.1
ENST00000442590.5
ENST00000450319.5
CDS CAA 72 bp GTCTTGCTGTCATCTTTATACCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGAGGACAGGGACGAACA +
Preference number: 6 (lower is better)
Translates to: VLLSSLYQVIVP*CSFGLRGQGRT
Trigger: TGTTCGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGCACTATAACTTGGTATAAAGATGACAGCAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409589.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
ENST00000430171.1
ENST00000442590.5
ENST00000450319.5
ENST00000452403.5
CDS CAA 90 bp GATACAGGTGTCTTGCTGTCATCTTTATACCAAGTTATAGTGCCTTaGTGTTCATTTGGGTTAAGAGGACAGGGACGAACATCAATTTCA +
Preference number: 6 (lower is better)
Translates to: DTGVLLSSLYQVIVP*CSFGLRGQGRTSIS
Trigger: TGAAATTGATGTTCGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGCACTATAACTTGGTATAAAGATGACAGCAAGACACCTGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409589.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
ENST00000430171.1
ENST00000442590.5
ENST00000450319.5
ENST00000452403.5
CDS CAA 90 bp AGGAACAAACCAAAGTTTCTCTTTGTGTTGATGAATCCTGGAGGCTaGTTCTGTAGATACAGGTGTCTTGCTGTCATCTTTATACCAAGT +
Preference number: 6 (lower is better)
Translates to: RNKPKFLFVLMNPGG*FCRYRCLAVIFIPS
Trigger: ACTTGGTATAAAGATGACAGCAAGACACCTGTATCTACAGAACAAGCCTCCAGGATTCATCAACACAAAGAGAAACTTTGGTTTGTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409589.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
ENST00000430171.1
ENST00000442590.5
ENST00000450319.5
CDS CAA 90 bp TTCCCTCTATGCTTTTCAGCCACATTCATCACGATGAGCCTATCTTaGACTCCACTAAAGTGTATATTGTCAAGAAGTAGAGGTTTGCAA +
Preference number: 6 (lower is better)
Translates to: FPLCFSATFITMSLS*TPLKCILSRSRGLQ
Trigger: TTGCAAACCTCTACTTCTTGACAATATACACTTTAGTGGAGTCAAAGATAGGCTCATCGTGATGAATGTGGCTGAAAAGCATAGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
CDS CAA 72 bp TGCTTTTCAGCCACATTCATCACGATGAGCCTATCTTaGACTCCACTAAAGTGTATATTGTCAAGAAGTAGA +
Preference number: 6 (lower is better)
Translates to: CFSATFITMSLS*TPLKCILSRSR
Trigger: TCTACTTCTTGACAATATACACTTTAGTGGAGTCAAAGATAGGCTCATCGTGATGAATGTGGCTGAAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
CDS CAA 90 bp ACATTCATCACGATGAGCCTATCTTTGACTCCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTGCAATCCTTACCACGCAATAGTAAT +
Preference number: 6 (lower is better)
Translates to: TFITMSLSLTPLKCI*SRSRGLQSLPRNSN
Trigger: ATTACTATTGCGTGGTAAGGATTGCAAACCTCTACTTCTTGACAATATACACTTTAGTGGAGTCAAAGATAGGCTCATCGTGATGAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413623.5
CDS CAA 90 bp ACATTCATCACGATGAGCCTATCTTTGACTCCACTAAAGTGTATATaGTCAAGAAGTAGAGGTTTGCAATCCTTATACCACTGTAATTTA +
Preference number: 6 (lower is better)
Translates to: TFITMSLSLTPLKCI*SRSRGLQSLYHCNL
Trigger: TAAATTACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGACAATATACACTTTAGTGGAGTCAAAGATAGGCTCATCGTGATGAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409929.5
ENST00000410023.6
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
CDS CCA 72 bp ATCTTTATACCAAGTTATAGTGCCTTTGTGTTCATTTaGGTTAAGAGGACAGGGACGAACATCAATTTCATT +
Preference number: 6 (lower is better)
Translates to: IFIPSYSAFVFI*VKRTGTNINFI
Trigger: AATGAAATTGATGTTCGTCCCTGTCCTCTTAACCCAAATGAACACAAAGGCACTATAACTTGGTATAAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000409288.5
ENST00000409329.5
ENST00000409589.5
ENST00000409929.5
ENST00000410023.6
ENST00000413623.5
ENST00000422532.2
ENST00000424272.5
ENST00000428279.5
ENST00000430171.1
ENST00000442590.5
ENST00000450319.5
ENST00000452403.5