Pregenerated sensors for IL1B (Homo sapiens)
Ensembl gene IDs: ENSG00000125538Ensembl transcript IDs: ENST00000263341.7, ENST00000416750.1, ENST00000418817.5, ENST00000432018.5, ENST00000477398.1, ENST00000487639.1, ENST00000491056.5, ENST00000496280.5
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTTAGAACCAAATGTGGCCGTGGTTTCTGTCAGGCGGGCTTTAAGTaGGTAGGAGAGGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGG | + |
Preference number: 1 (lower is better) Translates to: LRTKCGRGFCQAGFK*VGEVREAWLNKRAG Trigger: CCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACCTCTCCTACTCACTTAAAGCCCGCCTGACAGAAACCACGGCCACATTTGGTTCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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3UTR CCA 90 bp | ACAGGAGATCCTCTTAGCACTACCCTAAGGCAGGCAGTTGGGCATTaGTGTAGACAACAGGAAAGTCCAGGCTATAGCCGTACTCAAAAA | + |
Preference number: 1 (lower is better) Translates to: TGDPLSTTLRQAVGH*CRQQESPGYSRTQK Trigger: TTTTTGAGTACGGCTATAGCCTGGACTTTCCTGTTGTCTACACCAATGCCCAACTGCCTGCCTTAGGGTAGTGCTAAGAGGATCTCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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3UTR-3UTR TCA 90 bp | CAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTCTGAAAGGAGAGAGCTaGCTGTCCTGGCTGATGGAC | + |
Preference number: 2 (lower is better) Translates to: QNVGANDRGFLRTKCGRGLKGES*LSWLMD Trigger: GTCCATCAGCCAGGACAGTCAGCTCTCTCCTTTCAG...ACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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3UTR-3UTR TCA 90 bp | ATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTGCTGACTGTCCTGGCTaGTGGACAGGAGATCCTCTT | + |
Preference number: 2 (lower is better) Translates to: MWERMTEGFLEPNVAVVSADCPG*WTGDPL Trigger: AAGAGGATCTCCTGTCCATCAGCCAGGACAGTCAGC...AGAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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3UTR-3UTR CCA 90 bp | CATCAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGCTCAACAAAAGGGCTaGGGATTGGCCCTGAAAGGA | + |
Preference number: 2 (lower is better) Translates to: HQNVGANDRGFLRTKCGRAQQKG*GLALKG Trigger: TCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGC...ACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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3UTR-3UTR CCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAGAGGTGAGAGAGGCCTaGCTCAACAAAAGGGCTGGG | + |
Preference number: 2 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQEVREA*LNKRAG Trigger: CCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACCTC...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGGCCAGCCCTAGGGATTaGGTCCACATTCAGCACAGG | + |
Preference number: 4 (lower is better) Translates to: GERGLAQQKGWGLALKGEASPRD*VHIQHR Trigger: CCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGC...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTCTGACGCGGCCTGCCTaGAGCCCTTGCTGTAGTGGT | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSLTRPA*SPCCSG Trigger: ACCACTACAGCAAGGGCTTCAGGCAGGCCGCGTCAG...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGGCAATGAAGATTGGCTaGAGAGAATCCCAGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GERGLAQQKGWGLALKGEAMKIG*RESQSS Trigger: GCTGCTCTGGGATTCTCTTCAGCCAATCTTCATTGC...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | CAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTCATGGCCACAACAACTaGCGCGGCCTGCCTGAAGCC | + |
Preference number: 4 (lower is better) Translates to: QNVGANDRGFLRTKCGRGHGHNN*RGLPEA Trigger: GGCTTCAGGCAGGCCGCGTCAGTTGTTGTGGCCATG...ACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGAAGCCATCATTTCACTaGCGAGCTCAGGTACTTCTG | + |
Preference number: 4 (lower is better) Translates to: GERGLAQQKGWGLALKGEKPSFH*RAQVLL Trigger: CAGAAGTACCTGAGCTCGCCAGTGAAATGATGGCTT...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTCTGCTTGAGAGGTGCTaGTGTACCAGTTGGGGAACT | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSLLERC*CTSWGT Trigger: AGTTCCCCAACTGGTACATCAGCACCTCTCAAGCAG...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTCGGAGATTCGTAGCTaGATGCCGCCATCCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: QNVGANDRGFLRTKCGRGSEIRS*MPPSRG Trigger: CCCTCTGGATGGCGGCATCCAGCTACGAATCTCCGA...ACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTGAGGTGAGAGAGGCCTaGCTCAACAAAAGGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: QNVGANDRGFLRTKCGRGEVREA*LNKRAG Trigger: CCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACCTC...ACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | CAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTGAGCGTGCAGTTCAGTaGTCGTACAGGTGCATCGTG | + |
Preference number: 4 (lower is better) Translates to: QNVGANDRGFLRTKCGRGERAVQ*SYRCIV Trigger: CACGATGCACCTGTACGATCACTGAACTGCACGCTC...ACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTACAGATTCTTTTCCTTaGGGCCCAAGGCCACAGGTA | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSTDSFP*GPRPQV Trigger: TACCTGTGGCCTTGGGCCTCAAGGAAAAGAATCTGT...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | ATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTCAGGCGGGCTTTAAGTaGGTAGGAGAGGTGAGAGAG | + |
Preference number: 4 (lower is better) Translates to: MWERMTEGFLEPNVAVVSQAGFK*VGEVRE Trigger: CTCTCTCACCTCTCCTACTCACTTAAAGCCCGCCTG...AGAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCAGATTCGTAGCTGGATaGCGCCATCCAGAGGGCAGA | + |
Preference number: 4 (lower is better) Translates to: NVGANDRGFLRTKCGRGFRFVAG*RHPEGR Trigger: TCTGCCCTCTGGATGGCGGCATCCAGCTACGAATCT...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CATCAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTCTCAGGTCATTCTCCTaGAAGGTCTGTGGGCAGGGA | + |
Preference number: 4 (lower is better) Translates to: HQNVGANDRGFLRTKCGRLRSFS*KVCGQG Trigger: TCCCTGCCCACAGACCTTCCAGGAGAATGACCTGAG...ACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGTCTTTGGGTAATTTTTaGGATCTACACTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: GERGLAQQKGWGLALKGESLGNF*DLHSPA Trigger: AGCTGGAGAGTGTAGATCCCAAAAATTACCCAAAGA...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTTTGCTCATCAGAATGTaGGAGCGAATGACAGAGGGT | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSLLIRM*ERMTEG Trigger: ACCCTCTGTCATTCGCTCCCACATTCTGATGAGCAA...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGCACACCAGTCCAAATTaGATTGATTCCATAGCTATT | + |
Preference number: 4 (lower is better) Translates to: GERGLAQQKGWGLALKGEHTSPN*IDSIAI Trigger: AATAGCTATGGAATCAATTCAATTTGGACTGGTGTG...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | ATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTGAGCTCAGGTACTTCTaGCATGGCTGCTTCAGACAC | + |
Preference number: 4 (lower is better) Translates to: MWERMTEGFLEPNVAVVSELRYF*HGCFRH Trigger: GTGTCTGAAGCAGCCATGGCAGAAGTACCTGAGCTC...AGAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CATCAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTCAGAGGTCCAGGTCCTaGAAGGAGCACTTCATCTGT | + |
Preference number: 4 (lower is better) Translates to: HQNVGANDRGFLRTKCGRQRSRS*KEHFIC Trigger: ACAGATGAAGTGCTCCTTCCAGGACCTGGACCTCTG...ACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CATCAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTAAGTCAGTTATATCCTaGCCGCCTTTGGTCCCTCCC | + |
Preference number: 4 (lower is better) Translates to: HQNVGANDRGFLRTKCGRKSVIS*PPLVPP Trigger: GGGAGGGACCAAAGGCGGCCAGGATATAACTGACTT...ACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCGGCATGTTTTCTGCTTaGGAGGTGCTGATGTACCAG | + |
Preference number: 4 (lower is better) Translates to: NVGANDRGFLRTKCGRGFGMFSA*EVLMYQ Trigger: CTGGTACATCAGCACCTCTCAAGCAGAAAACATGCC...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTACACAAATTGCATGGTaGAGTCAGTTATATCCTGGC | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSTQIAW*SQLYPG Trigger: GCCAGGATATAACTGACTTCACCATGCAATTTGTGT...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCGAGAACACCACTTGTTaGTCCATATCCTGTCCCTGG | + |
Preference number: 4 (lower is better) Translates to: NVGANDRGFLRTKCGRGFENTTC*SISCPW Trigger: CCAGGGACAGGATATGGAGCAACAAGTGGTGTTCTC...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CATCAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTCAGGTACTTCTGCCATaGCTGCTTCAGACACTTGAG | + |
Preference number: 4 (lower is better) Translates to: HQNVGANDRGFLRTKCGRQVLLP*LLQTLE Trigger: CTCAAGTGTCTGAAGCAGCCATGGCAGAAGTACCTG...ACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | CATCAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTTCCATATCCTGTCCCTaGAGGTGGAGAGCTTTCAGT | + |
Preference number: 4 (lower is better) Translates to: HQNVGANDRGFLRTKCGRSISCP*RWRAFS Trigger: ACTGAAAGCTCTCCACCTCCAGGGACAGGATATGGA...ACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTCTTGTACAAAGGACATaGAGAACACCACTTGTTGCT | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSLVQRT*RTPLVA Trigger: AGCAACAAGTGGTGTTCTCCATGTCCTTTGTACAAG...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTTCTCCAGCTGTAGAGTaGGCTTATCATCTTTCAACA | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSSPAVE*AYHLST Trigger: TGTTGAAAGATGATAAGCCCACTCTACAGCTGGAGA...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAATATCCTGGCCGCCTTTaGTCCCTCCCAGGAAGACGG | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQYPGRL*SLPGRR Trigger: CCGTCTTCCTGGGAGGGACCAAAGGCGGCCAGGATA...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTACAAGTCATCCTCATTaGCACTGTAATAAGCCATCA | + |
Preference number: 4 (lower is better) Translates to: VPFLPALGIESTFSTGLSTSHPH*HCNKPS Trigger: TGATGGCTTATTACAGTGGCAATGAGGATGACTTGT...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCGACGGGCATGTTTTCTaGTTGAGAGGTGCTGATGTA | + |
Preference number: 4 (lower is better) Translates to: NVGANDRGFLRTKCGRGFDGHVF*LRGADV Trigger: TACATCAGCACCTCTCAAGCAGAAAACATGCCCGTC...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | ATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTTCCTGTCCCTGGAGGTaGAGAGCTTTCAGTTCATAT | + |
Preference number: 4 (lower is better) Translates to: MWERMTEGFLEPNVAVVSSCPWR*RAFSSY Trigger: ATATGAACTGAAAGCTCTCCACCTCCAGGGACAGGA...AGAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCCAGGCAGTTGGGCATTaGTGTAGACAACAGGAAAGT | + |
Preference number: 4 (lower is better) Translates to: NVGANDRGFLRTKCGRGFQAVGH*CRQQES Trigger: ACTTTCCTGTTGTCTACACCAATGCCCAACTGCCTG...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAGCTGACTGTCCTGGCTaGTGGACAGGAGATCCTCTT | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQADCPG*WTGDPL Trigger: AAGAGGATCTCCTGTCCATCAGCCAGGACAGTCAGC...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAACTGAAAGGAGAGAGCTaGCTGTCCTGGCTGATGGAC | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQLKGES*LSWLMD Trigger: GTCCATCAGCCAGGACAGTCAGCTCTCTCCTTTCAG...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAGTGAGTCCCGGAGCGTaGAGTTCAGTGATCGTACAG | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQVSPGA*SSVIVQ Trigger: CTGTACGATCACTGAACTGCACGCTCCGGGACTCAC...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR GCA 90 bp | ATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTCTCTTTTACAGACACTaGTACTTCTTGCCCCCTTTG | + |
Preference number: 4 (lower is better) Translates to: MWERMTEGFLEPNVAVVSLFYRH*YFLPPL Trigger: CAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAG...AGAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAATCCTCAGCTTGTCCATaGCCACAACAACTGACGCGG | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQSSACP*PQQLTR Trigger: CCGCGTCAGTTGTTGTGGCCATGGACAAGCTGAGGA...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR TCA 90 bp | ATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTCAGACACTTGAGCAATaGAGATTGGCTGAAGAGAAT | + |
Preference number: 4 (lower is better) Translates to: MWERMTEGFLEPNVAVVSQTLEQ*RLAEEN Trigger: ATTCTCTTCAGCCAATCTTCATTGCTCAAGTGTCTG...AGAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAGCTCAACAAAAGGGCTaGGGATTGGCCCTGAAAGGA | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQAQQKG*GLALKG Trigger: TCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGC...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAAACCAAATGTGGCCGTaGTTTCTGTCAGGCGGGCTT | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQNQMWP*FLSGGL Trigger: AAGCCCGCCTGACAGAAACCACGGCCACATTTGGTT...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CCA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAAGCTTTCAGTTCATATaGACCAGACATCACCAAGCT | + |
Preference number: 4 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQSFQFI*TRHHQA Trigger: AGCTTGGTGATGTCTGGTCCATATGAACTGAAAGCT...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS TCA 90 bp | GCAGGGAACCAGCATCTTCCTCAGCTTGTCCATGGCCACAACAACTaGCGCGGCCTGCCTGAAGCCCTTGCTGTAGTGGTGGTCGGAGAT | + |
Preference number: 5 (lower is better) Translates to: AGNQHLPQLVHGHNN*RGLPEALAVVVVGD Trigger: ATCTCCGACCACCACTACAGCAAGGGCTTCAGGCAGGCCGCGTCAGTTGTTGTGGCCATGGACAAGCTGAGGAAGATGCTGGTTCCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS TCA 90 bp | TCTTCCTCAGCTTGTCCATGGCCACAACAACTGACGCGGCCTGCCTaGAGCCCTTGCTGTAGTGGTGGTCGGAGATTCGTAGCTGGATGC | + |
Preference number: 5 (lower is better) Translates to: SSSACPWPQQLTRPA*SPCCSGGRRFVAGC Trigger: GCATCCAGCTACGAATCTCCGACCACCACTACAGCAAGGGCTTCAGGCAGGCCGCGTCAGTTGTTGTGGCCATGGACAAGCTGAGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS GCA 90 bp | ATCCTGGCCGCCTTTGGTCCCTCCCAGGAAGACGGGCATGTTTTCTaGTTGAGAGGTGCTGATGTACCAGTTGGGGAACTGGGCAGACTC | + |
Preference number: 5 (lower is better) Translates to: ILAAFGPSQEDGHVF*LRGADVPVGELGRL Trigger: GAGTCTGCCCAGTTCCCCAACTGGTACATCAGCACCTCTCAAGCAGAAAACATGCCCGTCTTCCTGGGAGGGACCAAAGGCGGCCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS-3UTR CAA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTATATCCTGGCCGCCTTaGGTCCCTCCCAGGAAGACG | + |
Preference number: 5 (lower is better) Translates to: VPFLPALGIESTFSTGLSISWPP*VPPRKT Trigger: CGTCTTCCTGGGAGGGACCAAAGGCGGCCAGGATAT...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS TCA 90 bp | TGGCCGCCTTTGGTCCCTCCCAGGAAGACGGGCATGTTTTCTGCTTaGGAGGTGCTGATGTACCAGTTGGGGAACTGGGCAGACTCAAAT | + |
Preference number: 5 (lower is better) Translates to: WPPLVPPRKTGMFSA*EVLMYQLGNWADSN Trigger: ATTTGAGTCTGCCCAGTTCCCCAACTGGTACATCAGCACCTCTCAAGCAGAAAACATGCCCGTCTTCCTGGGAGGGACCAAAGGCGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS CCA 90 bp | GATGAAGGGAAAGAAGGTGCTCAGGTCATTCTCCTGGAAGGTCTGTaGGCAGGGAACCAGCATCTTCCTCAGCTTGTCCATGGCCACAAC | + |
Preference number: 5 (lower is better) Translates to: DEGKEGAQVILLEGL*AGNQHLPQLVHGHN Trigger: GTTGTGGCCATGGACAAGCTGAGGAAGATGCTGGTTCCCTGCCCACAGACCTTCCAGGAGAATGACCTGAGCACCTTCTTTCCCTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS CCA 90 bp | CCACCACCAACGTTAGTGAGTGACTGTGGTGATATGATGACCAAGTaGCCAGGTCAGCAAGTGGTGCAGCCTGTGTCTCACTGGAAGAGG | + |
Preference number: 5 (lower is better) Translates to: PPPTLVSDCGDMMTK*PGQQVVQPVSHWKR Trigger: CCTCTTCCAGTGAGACACAGGCTGCACCACTTGCTGACCTGGCCACTTGGTCATCATATCACCACAGTCACTCACTAACGTTGGTGGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477398.1 |
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CDS-3UTR CAA 90 bp | GTTCCCTTTCTGCCAGCCCTAGGGATTGAGTCCACATTCAGCACAGGACTCTCTGTGCTGATGTACCAGTaGGGGAACTGGGCAGACTCA | + |
Preference number: 5 (lower is better) Translates to: VPFLPALGIESTFSTGLSVLMYQ*GNWADS Trigger: TGAGTCTGCCCAGTTCCCCAACTGGTACATCAGCAC...AGAGAGTCCTGTGCTGAATGTGGACTCAATCCCTAGGGCTGGCAGAAAGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CAA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGAAGGCCACAGGTATTTaGTCATTACTTTCTTCTCCT | + |
Preference number: 5 (lower is better) Translates to: GERGLAQQKGWGLALKGEKATGI*SLLSSP Trigger: AGGAGAAGAAAGTAATGACAAAATACCTGTGGCCTT...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS TCA 90 bp | GACTCTCTGGGTACAGCTCTCTTTAGGAAGACACAAATTGCATGGTaGAGTCAGTTATATCCTGGCCGCCTTTGGTCCCTCCCAGGAAGA | + |
Preference number: 5 (lower is better) Translates to: DSLGTALFRKTQIAW*SQLYPGRLWSLPGR Trigger: TCTTCCTGGGAGGGACCAAAGGCGGCCAGGATATAACTGACTTCACCATGCAATTTGTGTCTTCCTAAAGAGAGCTGTACCCAGAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CAA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCGGAGAACACCACTTGTaGCTCCATATCCTGTCCCTG | + |
Preference number: 5 (lower is better) Translates to: NVGANDRGFLRTKCGRGFGEHHL*LHILSL Trigger: CAGGGACAGGATATGGAGCAACAAGTGGTGTTCTCC...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CAA 90 bp | GGTGAGAGAGGCCTGGCTCAACAAAAGGGCTGGGGATTGGCCCTGAAAGGAGAGTTAGGAAGACACAAATaGCATGGTGAAGTCAGTTAT | + |
Preference number: 5 (lower is better) Translates to: GERGLAQQKGWGLALKGELGRHK*HGEVSY Trigger: ATAACTGACTTCACCATGCAATTTGTGTCTTCCTAA...CTCTCCTTTCAGGGCCAATCCCCAGCCCTTTTGTTGAGCCAGGCCTCTCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS TCA 90 bp | GTGGAGATCTACTGCCTGCTCTTGGCTAACTACCTTCTTCAAAGATaGAGGGAAAGAAGGTGCTCAGGTCATTCTCCTGGAAGGTCTGTG | + |
Preference number: 5 (lower is better) Translates to: VEIYCLLLANYLLQR*RERRCSGHSPGRSV Trigger: CACAGACCTTCCAGGAGAATGACCTGAGCACCTTCTTTCCCTTCATCTTTGAAGAAGGTAGTTAGCCAAGAGCAGGCAGTAGATCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000491056.5 ENST00000496280.5 |
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CDS CCA 90 bp | ACAAAGGACATGGAGAACACCACTTGTTGCTCCATATCCTGTCCCTaGAGGTGGAGAGCTTTCAGTTCATATGGACCAGACATCACCAAG | + |
Preference number: 5 (lower is better) Translates to: TKDMENTTCCSISCP*RWRAFSSYGPDITK Trigger: CTTGGTGATGTCTGGTCCATATGAACTGAAAGCTCTCCACCTCCAGGGACAGGATATGGAGCAACAAGTGGTGTTCTCCATGTCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS CCA 90 bp | AAATGGGAAACATTATCACTACTCCTCCCCTGTCACCACCAAGTGTaGCCACCACCACCAACGTTAGTGAGTGACTGTGGTGATATGATG | + |
Preference number: 5 (lower is better) Translates to: KWETLSLLLPCHHQV*PPPPTLVSDCGDMM Trigger: CATCATATCACCACAGTCACTCACTAACGTTGGTGGTGGTGGCCACACTTGGTGGTGACAGGGGAGGAGTAGTGATAATGTTTCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477398.1 |
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CDS-3UTR CAA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCCATGGAGAACACCACTaGTTGCTCCATATCCTGTCC | + |
Preference number: 5 (lower is better) Translates to: NVGANDRGFLRTKCGRGFHGEHH*LLHILS Trigger: GGACAGGATATGGAGCAACAAGTGGTGTTCTCCATG...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CAA 90 bp | AATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTTTCTACAGATTCTTTTCCTaGAGGCCCAAGGCCACAGGT | + |
Preference number: 5 (lower is better) Translates to: NVGANDRGFLRTKCGRGFYRFFS*RPKATG Trigger: ACCTGTGGCCTTGGGCCTCAAGGAAAAGAATCTGTA...GAAACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS CCA 90 bp | GACATGGAGAACACCACTTGTTGCTCCATATCCTGTCCCTGGAGGTaGAGAGCTTTCAGTTCATATGGACCAGACATCACCAAGCTTTTT | + |
Preference number: 5 (lower is better) Translates to: DMENTTCCSISCPWR*RAFSSYGPDITKLF Trigger: AAAAAGCTTGGTGATGTCTGGTCCATATGAACTGAAAGCTCTCCACCTCCAGGGACAGGATATGGAGCAACAAGTGGTGTTCTCCATGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS-3UTR CAA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAGCAGCCTGTTGTGCCTaGTGCCTCGAAGAGGTTTGG | + |
Preference number: 5 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQAACCA*CLEEVW Trigger: CCAAACCTCTTCGAGGCACAAGGCACAACAGGCTGC...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS TCA 90 bp | CCGAGTCATAAGCATTATATTACACCTGGCATTTTTGCAAAAAGCTaGGAGAGGGAGGCAGAGAGGGAAGGAGAGGGAGAGACAGAGAAA | + |
Preference number: 5 (lower is better) Translates to: PSHKHYITPGIFAKS*EREAEREGEGETEK Trigger: TTTCTCTGTCTCTCCCTCTCCTTCCCTCTCTGCCTCCCTCTCTCAGCTTTTTGCAAAAATGCCAGGTGTAATATAATGCTTATGACTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416750.1 ENST00000491056.5 |
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CDS-3UTR CAA 90 bp | CAGAATGTGGGAGCGAATGACAGAGGGTTTCTTAGAACCAAATGTGGCCGTGGTAGACACTGCTACTTCTaGCCCCCTTTGAATAAATTA | + |
Preference number: 5 (lower is better) Translates to: QNVGANDRGFLRTKCGRGRHCYF*PPLNKL Trigger: TAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCT...ACCACGGCCACATTTGGTTCTAAGAAACCCTCTGTCATTCGCTCCCACATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS CCA 90 bp | AGAAGGGCTTCATTCCATAGCATTCACTTACCTCCAGCTGTAGAGTaGGCTTATCATCTTTCAACACGCAGGACAGGTACAGATTCTTTT | + |
Preference number: 5 (lower is better) Translates to: RRASFHSIHLPPAVE*AYHLSTRRTGTDSF Trigger: AAAAGAATCTGTACCTGTCCTGCGTGTTGAAAGATGATAAGCCCACTCTACAGCTGGAGGTAAGTGAATGCTATGGAATGAAGCCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487639.1 |
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CDS-3UTR CAA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAGGCTGCTTCAGACACTaGAGCAATGAAGATTGGCTG | + |
Preference number: 5 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQGCFRH*SNEDWL Trigger: CAGCCAATCTTCATTGCTCAAGTGTCTGAAGCAGCC...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS-3UTR CAA 90 bp | AGGCTCTTTTACAGACACTGCTACTTCTTGCCCCCTTTGAATAAATTAGACCAAAGCATCTTCCTCAGCTaGTCCATGGCCACAACAACT | + |
Preference number: 5 (lower is better) Translates to: RLFYRHCYFLPPLNKLDQSIFLS*SMATTT Trigger: AGTTGTTGTGGCCATGGACAAGCTGAGGAAGATGCT...TTGGTCTAATTTATTCAAAGGGGGCAAGAAGTAGCAGTGTCTGTAAAAGAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS TCA 90 bp | GCTTATCATCTTTCAACACGCAGGACAGGTACAGATTCTTTTCCTTaGGGCCCAAGGCCACAGGTATTTTGTCATTACTTTCTTCTCCTT | + |
Preference number: 5 (lower is better) Translates to: AYHLSTRRTGTDSFP*GPRPQVFCHYFLLL Trigger: AAGGAGAAGAAAGTAATGACAAAATACCTGTGGCCTTGGGCCTCAAGGAAAAGAATCTGTACCTGTCCTGCGTGTTGAAAGATGATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS TCA 90 bp | AAGGATAATCAAATTTATGTTGAAGACTTGGTTGTCTTCCTACTATaGAATGGGAAACATTATCACTACTCCTCCCCTGTCACCACCAAG | + |
Preference number: 5 (lower is better) Translates to: KDNQIYVEDLVVFLL*NGKHYHYSSPVTTK Trigger: CTTGGTGGTGACAGGGGAGGAGTAGTGATAATGTTTCCCATTTCATAGTAGGAAGACAACCAAGTCTTCAACATAAATTTGATTATCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477398.1 |
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CDS GCA 72 bp | CCTTGCTGTAGTGGTGGTCGGAGATTCGTAGCTGGATaGCGCCATCCAGAGGGCAGAGGTCCAGGTCCTGGA | + |
Preference number: 6 (lower is better) Translates to: PCCSGGRRFVAG*RHPEGRGPGPG Trigger: TCCAGGACCTGGACCTCTGCCCTCTGGATGGCGGCATCCAGCTACGAATCTCCGACCACCACTACAGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS CAA 72 bp | AAGGTCTGTGGGCAGGGAACCAGCATCTTCCTCAGCTaGTCCATGGCCACAACAACTGACGCGGCCTGCCTG | + |
Preference number: 6 (lower is better) Translates to: KVCGQGTSIFLS*SMATTTDAACL Trigger: CAGGCAGGCCGCGTCAGTTGTTGTGGCCATGGACAAGCTGAGGAAGATGCTGGTTCCCTGCCCACAGACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS TCA 72 bp | GCTTGTCCATGGCCACAACAACTGACGCGGCCTGCCTaGAGCCCTTGCTGTAGTGGTGGTCGGAGATTCGTA | + |
Preference number: 6 (lower is better) Translates to: ACPWPQQLTRPA*SPCCSGGRRFV Trigger: TACGAATCTCCGACCACCACTACAGCAAGGGCTTCAGGCAGGCCGCGTCAGTTGTTGTGGCCATGGACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS CAA 90 bp | CTGGCCGCCTTTGGTCCCTCCCAGGAAGACGGGCATGTTTTCTGCTaGAGAGGTGCTGATGTACCAGTTGGGGAACTGGGCAGACTCAAA | + |
Preference number: 6 (lower is better) Translates to: LAAFGPSQEDGHVFC*RGADVPVGELGRLK Trigger: TTTGAGTCTGCCCAGTTCCCCAACTGGTACATCAGCACCTCTCAAGCAGAAAACATGCCCGTCTTCCTGGGAGGGACCAAAGGCGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS TCA 72 bp | TTGGTCCCTCCCAGGAAGACGGGCATGTTTTCTGCTTaGGAGGTGCTGATGTACCAGTTGGGGAACTGGGCA | + |
Preference number: 6 (lower is better) Translates to: LVPPRKTGMFSA*EVLMYQLGNWA Trigger: TGCCCAGTTCCCCAACTGGTACATCAGCACCTCTCAAGCAGAAAACATGCCCGTCTTCCTGGGAGGGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS GCA 72 bp | GCCTTTGGTCCCTCCCAGGAAGACGGGCATGTTTTCTaGTTGAGAGGTGCTGATGTACCAGTTGGGGAACTG | + |
Preference number: 6 (lower is better) Translates to: AFGPSQEDGHVF*LRGADVPVGEL Trigger: CAGTTCCCCAACTGGTACATCAGCACCTCTCAAGCAGAAAACATGCCCGTCTTCCTGGGAGGGACCAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS GCA 72 bp | GCTGAAGAGAATCCCAGAGCAGCCTGTTGTGCCTTGTaGCTCGAAGAGGTTTGGTATCTGCCAGTTTCTCCC | + |
Preference number: 6 (lower is better) Translates to: AEENPRAACCAL*LEEVWYLPVSP Trigger: GGGAGAAACTGGCAGATACCAAACCTCTTCGAGGCACAAGGCACAACAGGCTGCTCTGGGATTCTCTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418817.5 |
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CDS CCA 72 bp | AAAGAAGGTGCTCAGGTCATTCTCCTGGAAGGTCTGTaGGCAGGGAACCAGCATCTTCCTCAGCTTGTCCAT | + |
Preference number: 6 (lower is better) Translates to: KEGAQVILLEGL*AGNQHLPQLVH Trigger: ATGGACAAGCTGAGGAAGATGCTGGTTCCCTGCCCACAGACCTTCCAGGAGAATGACCTGAGCACCTTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000263341.7 ENST00000416750.1 ENST00000418817.5 ENST00000432018.5 ENST00000487639.1 ENST00000491056.5 ENST00000496280.5 |
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CDS CCA 72 bp | GAAGACACAAATTGCATGGTGAAGTCAGTTATATCCTaGCCGCCTTTGGTCCCTCCCAGGAAGACGGGCATG | + |
Preference number: 6 (lower is better) Translates to: EDTNCMVKSVIS*PPLVPPRKTGM Trigger: CATGCCCGTCTTCCTGGGAGGGACCAAAGGCGGCCAGGATATAACTGACTTCACCATGCAATTTGTGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS CCA 72 bp | ACGTTAGTGAGTGACTGTGGTGATATGATGACCAAGTaGCCAGGTCAGCAAGTGGTGCAGCCTGTGTCTCAC | + |
Preference number: 6 (lower is better) Translates to: TLVSDCGDMMTK*PGQQVVQPVSH Trigger: GTGAGACACAGGCTGCACCACTTGCTGACCTGGCCACTTGGTCATCATATCACCACAGTCACTCACTAACGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477398.1 |
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CDS CAA 90 bp | CAGCACAGGACTCTCTGGGTACAGCTCTCTTTAGGAAGACACAAATaGCATGGTGAAGTCAGTTATATCCTGGCCGCCTTTGGTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: QHRTLWVQLSLGRHK*HGEVSYILAAFGPS Trigger: GGAGGGACCAAAGGCGGCCAGGATATAACTGACTTCACCATGCAATTTGTGTCTTCCTAAAGAGAGCTGTACCCAGAGAGTCCTGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS CCA 72 bp | TGCCATGGCTGCTTCAGACACTTGAGCAATGAAGATTaGCTGAAGAGAATCCCAGAGCAGCCTGTTGTGCCT | + |
Preference number: 6 (lower is better) Translates to: CHGCFRHLSNED*LKRIPEQPVVP Trigger: AGGCACAACAGGCTGCTCTGGGATTCTCTTCAGCCAATCTTCATTGCTCAAGTGTCTGAAGCAGCCATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000477398.1 ENST00000496280.5 |
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CDS CCA 72 bp | AGAGCAGCCTGTTGTGCCTTGTGCCTCGAAGAGGTTTaGTATCTGCCAGTTTCTCCCTCGCTGTTTTTATGG | + |
Preference number: 6 (lower is better) Translates to: RAACCALCLEEV*YLPVSPSLFLW Trigger: CCATAAAAACAGCGAGGGAGAAACTGGCAGATACCAAACCTCTTCGAGGCACAAGGCACAACAGGCTGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418817.5 |
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CDS CCA 72 bp | CCATCATTTCACTGGCGAGCTCAGGTACTTCTGCCATaGCTGCTTCAGACACCTTTAGGGTGTCAGCTGTTA | + |
Preference number: 6 (lower is better) Translates to: PSFHWRAQVLLP*LLQTPLGCQLL Trigger: TAACAGCTGACACCCTAAAGGTGTCTGAAGCAGCCATGGCAGAAGTACCTGAGCTCGCCAGTGAAATGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416750.1 |
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CDS CAA 72 bp | AATTGCATGGTGAAGTCAGTTATATCCTGGCCGCCTTaGGTCCCTCCCAGGAAGACGGGCATGTTTTCTGCT | + |
Preference number: 6 (lower is better) Translates to: NCMVKSVISWPP*VPPRKTGMFSA Trigger: AGCAGAAAACATGCCCGTCTTCCTGGGAGGGACCAAAGGCGGCCAGGATATAACTGACTTCACCATGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263341.7 ENST00000491056.5 |
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CDS CAA 72 bp | CAGAGCAGCCTGTTGTGCCTTGTGCCTCGAAGAGGTTaGGTATCTGCCAGTTTCTCCCTCGCTGTTTTTATG | + |
Preference number: 6 (lower is better) Translates to: QSSLLCLVPRRG*VSASFSLAVFM Trigger: CATAAAAACAGCGAGGGAGAAACTGGCAGATACCAAACCTCTTCGAGGCACAAGGCACAACAGGCTGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418817.5 |
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CDS CAA 72 bp | TTGGCTGAAGAGAATCCCAGAGCAGCCTGTTGTGCCTaGTGCCTCGAAGAGGTTTGGTATCTGCCAGTTTCT | + |
Preference number: 6 (lower is better) Translates to: LAEENPRAACCA*CLEEVWYLPVS Trigger: AGAAACTGGCAGATACCAAACCTCTTCGAGGCACAAGGCACAACAGGCTGCTCTGGGATTCTCTTCAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418817.5 |
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CDS CCA 72 bp | ATGGAGAACACCACTTGTTGCTCCATATCCTGTCCCTaGAGGTGGAGAGCTTTCAGTTCATATGGACCAGAC | + |
Preference number: 6 (lower is better) Translates to: MENTTCCSISCP*RWRAFSSYGPD Trigger: GTCTGGTCCATATGAACTGAAAGCTCTCCACCTCCAGGGACAGGATATGGAGCAACAAGTGGTGTTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS CAA 72 bp | ATACCATGGCATCAAAGTGGCCCAGAACTCCCTTCTTaGAGCTTTCCCTGTGTTAGAGCCCTTCCTTGGGTT | + |
Preference number: 6 (lower is better) Translates to: IPWHQSGPELPS*SFPCVRALPWV Trigger: AACCCAAGGAAGGGCTCTAACACAGGGAAAGCTCAAAGAAGGGAGTTCTGGGCCACTTTGATGCCATGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477398.1 |
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CDS GCA 72 bp | ATAAGCCATCATTTCACTGGCGAGCTCAGGTACTTCTaGCATGGCTGCTTCAGACACCTAGTTGTAAGGAAG | + |
Preference number: 6 (lower is better) Translates to: ISHHFTGELRYF*HGCFRHLVVRK Trigger: CTTCCTTACAACTAGGTGTCTGAAGCAGCCATGGCAGAAGTACCTGAGCTCGCCAGTGAAATGATGGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418817.5 |
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CDS GCA 72 bp | ATAAGCCATCATTTCACTGGCGAGCTCAGGTACTTCTaGCATGGCTGCTTCAGACACCTGTGTAAAAAGGAG | + |
Preference number: 6 (lower is better) Translates to: ISHHFTGELRYF*HGCFRHLCKKE Trigger: CTCCTTTTTACACAGGTGTCTGAAGCAGCCATGGCAGAAGTACCTGAGCTCGCCAGTGAAATGATGGCTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432018.5 ENST00000491056.5 |
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CDS TCA 72 bp | AAGCATTATATTACACCTGGCATTTTTGCAAAAAGCTaGGAGAGGGAGGCAGAGAGGGAAGGAGAGGGAGAG | + |
Preference number: 6 (lower is better) Translates to: KHYITPGIFAKS*EREAEREGEGE Trigger: CTCTCCCTCTCCTTCCCTCTCTGCCTCCCTCTCTCAGCTTTTTGCAAAAATGCCAGGTGTAATATAATGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416750.1 ENST00000491056.5 |
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CDS GCA 72 bp | ATAAGCCATCATTTCACTGGCGAGCTCAGGTACTTCTaGCATGGCTGCTTCAGACACTTGAGCAATGAAGAT | + |
Preference number: 6 (lower is better) Translates to: ISHHFTGELRYF*HGCFRHLSNED Trigger: ATCTTCATTGCTCAAGTGTCTGAAGCAGCCATGGCAGAAGTACCTGAGCTCGCCAGTGAAATGATGGCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000477398.1 ENST00000496280.5 |
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CDS CAA 90 bp | CAGAATATTTCCCGAGTCATAAGCATTATATTACACCTGGCATTTTaGCAAAAAGCTGAGAGAGGGAGGCAGAGAGGGAAGGAGAGGGAG | + |
Preference number: 6 (lower is better) Translates to: QNISRVISIILHLAF*QKAERGRQRGKERE Trigger: CTCCCTCTCCTTCCCTCTCTGCCTCCCTCTCTCAGCTTTTTGCAAAAATGCCAGGTGTAATATAATGCTTATGACTCGGGAAATATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000416750.1 ENST00000491056.5 |
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CDS CAA 72 bp | ACTCTCTGGGTACAGCTCTCTTTAGGAAGACACAAATaGCATGGTGAAGTCAGTTATATCCTGGCCGCCTTT | + |
Preference number: 6 (lower is better) Translates to: TLWVQLSLGRHK*HGEVSYILAAF Trigger: AAAGGCGGCCAGGATATAACTGACTTCACCATGCAATTTGTGTCTTCCTAAAGAGAGCTGTACCCAGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263341.7 |
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CDS CAA 90 bp | GGCTTATCATCTTTCAACACGCAGGACAGGTACAGATTCTTTTCCTaGAGGCCCAAGGCCACAGGTATTTTGTCATTACTTTCTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: GLSSFNTQDRYRFFS*RPKATGILSLLSSP Trigger: AGGAGAAGAAAGTAATGACAAAATACCTGTGGCCTTGGGCCTCAAGGAAAAGAATCTGTACCTGTCCTGCGTGTTGAAAGATGATAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS CAA 90 bp | TCTAGAGAAAAGCATTTGCTAAACCAAACCCCAACTAGCAATGTATaGGCTAGGAGAGCTGGAGCAGAGGCTTTGACACTAACCTTTAGG | + |
Preference number: 6 (lower is better) Translates to: SREKHLLNQTPTSNV*ARRAGAEALTLTFR Trigger: CCTAAAGGTTAGTGTCAAAGCCTCTGCTCCAGCTCTCCTAGCCAATACATTGCTAGTTGGGGTTTGGTTTAGCAAATGCTTTTCTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491056.5 |
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CDS TCA 72 bp | CTTTCAACACGCAGGACAGGTACAGATTCTTTTCCTTaGGGCCCAAGGCCACAGGTATTTTGTCATTACTTT | + |
Preference number: 6 (lower is better) Translates to: LSTRRTGTDSFP*GPRPQVFCHYF Trigger: AAAGTAATGACAAAATACCTGTGGCCTTGGGCCTCAAGGAAAAGAATCTGTACCTGTCCTGCGTGTTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS CAA 72 bp | TCTTTCAACACGCAGGACAGGTACAGATTCTTTTCCTaGAGGCCCAAGGCCACAGGTATTTTGTCATTACTT | + |
Preference number: 6 (lower is better) Translates to: SFNTQDRYRFFS*RPKATGILSLL Trigger: AAGTAATGACAAAATACCTGTGGCCTTGGGCCTCAAGGAAAAGAATCTGTACCTGTCCTGCGTGTTGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263341.7 ENST00000487639.1 ENST00000491056.5 |
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CDS CAA 90 bp | AATGAATGTGTGAAAGAGAAGTCCTTTGGGTCTAGAGAAAAGCATTaGCTAAACCAAACCCCAACTAGCAATGTATTGGCTAGGAGAGCT | + |
Preference number: 6 (lower is better) Translates to: NECVKEKSFGSREKH*LNQTPTSNVLARRA Trigger: AGCTCTCCTAGCCAATACATTGCTAGTTGGGGTTTGGTTTAGCAAATGCTTTTCTCTAGACCCAAAGGACTTCTCTTTCACACATTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491056.5 |
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CDS CAA 90 bp | TCAAGATCTTCTTTAAGAATAGTTTCCACTAAAGAGATGATTGCTTaGGTTTCCAGCCTTCTTTGTTTTGTCTCCCCGCTGGGCCTTCTA | + |
Preference number: 6 (lower is better) Translates to: SRSSLRIVSTKEMIA*VSSLLCFVSPLGLL Trigger: TAGAAGGCCCAGCGGGGAGACAAAACAAAGAAGGCTGGAAACCAAAGCAATCATCTCTTTAGTGGAAACTATTCTTAAAGAAGATCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000491056.5 ENST00000496280.5 |
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CDS TCA 72 bp | CAAATTTATGTTGAAGACTTGGTTGTCTTCCTACTATaGAATGGGAAACATTATCACTACTCCTCCCCTGTC | + |
Preference number: 6 (lower is better) Translates to: QIYVEDLVVFLL*NGKHYHYSSPV Trigger: GACAGGGGAGGAGTAGTGATAATGTTTCCCATTTCATAGTAGGAAGACAACCAAGTCTTCAACATAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477398.1 |