RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL17REL (Homo sapiens)

Ensembl gene IDs: ENSG00000188263

Ensembl transcript IDs: ENST00000341280.5, ENST00000389983.6

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTaGCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCCTGCGGCCCCT +
Preference number: 1 (lower is better)
Translates to: VSPTQSPVQCTPRPA*RGRPRSSPRPPAAP
Trigger: AGGGGCCGCAGGAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 90 bp GGGCCGGATGGTCTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTaGACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCT +
Preference number: 1 (lower is better)
Translates to: GPDGLPVSPTQSPVQ*TPRPACRGRPRSSP
Trigger: AGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAGACCATCCGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR TCA 90 bp CCAGGCTCCAGAGGGTGGCTCAGCGGGGAAGCCGGAGAGCCTACGTaGCCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTG +
Preference number: 1 (lower is better)
Translates to: PGSRGWLSGEAGEPT*PTREVFKGRPHGPL
Trigger: CAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCCACCCTCTGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp GCGTGCGGGAGGCCCAGCGGTGTGTGGTGGAGGGAAATGCAAGGCTaGAGGGCAGTGCTGGGCACAGACCTGGGTTTGGCGCAGAAGCCT +
Preference number: 1 (lower is better)
Translates to: ACGRPSGVWWREMQG*RAVLGTDLGLAQKP
Trigger: AGGCTTCTGCGCCAAACCCAGGTCTGTGCCCAGCACTGCCCTCCAGCCTTGCATTTCCCTCCACCACACACCGCTGGGCCTCCCGCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp ACAGTGAGACCAGGGTGGGCGTGCGGGAGGCCCAGCGGTGTGTGGTaGAGGGAAATGCAAGGCTGGAGGGCAGTGCTGGGCACAGACCTG +
Preference number: 1 (lower is better)
Translates to: TVRPGWACGRPSGVW*REMQGWRAVLGTDL
Trigger: CAGGTCTGTGCCCAGCACTGCCCTCCAGCCTTGCATTTCCCTCCACCACACACCGCTGGGCCTCCCGCACGCCCACCCTGGTCTCACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp GTGACAGTGAGACCAGGGTGGGCGTGCGGGAGGCCCAGCGGTGTGTaGTGGAGGGAAATGCAAGGCTGGAGGGCAGTGCTGGGCACAGAC +
Preference number: 1 (lower is better)
Translates to: VTVRPGWACGRPSGV*WREMQGWRAVLGTD
Trigger: GTCTGTGCCCAGCACTGCCCTCCAGCCTTGCATTTCCCTCCACCACACACCGCTGGGCCTCCCGCACGCCCACCCTGGTCTCACTGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 90 bp CGGCCCCTGAGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTaGTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATG +
Preference number: 1 (lower is better)
Translates to: RPLRDGHPLERRLQS*WGTEKCTSVLQPWM
Trigger: CATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCTCAGGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 90 bp GCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTaGCAGCCCCAGGGACACCTGACCAGCAGGTGGCCATTGCCCCTT +
Preference number: 1 (lower is better)
Translates to: AVDLPSIAWALHSGR*QPQGHLTSRWPLPL
Trigger: AAGGGGCAATGGCCACCTGCTGGTCAGGTGTCCCTGGGGCTGGCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp CCCCTGAGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTaGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAG +
Preference number: 1 (lower is better)
Translates to: PLRDGHPLERRLQSC*GTEKCTSVLQPWMQ
Trigger: CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCTCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp CTCACAGGGAGGGGTGCAGGTAGGAGTGCCAGCTCTGACCCTTCCTaGACTCCAAGGCAGAGCCACGCTCCTGACCACACCCAGGCCACA +
Preference number: 1 (lower is better)
Translates to: LTGRGAGRSASSDPS*TPRQSHAPDHTQAT
Trigger: TGTGGCCTGGGTGTGGTCAGGAGCGTGGCTCTGCCTTGGAGTCCAGGAAGGGTCAGAGCTGGCACTCCTACCTGCACCCCTCCCTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 90 bp GCTCTGCAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTaGAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: ALQPPLQSMGHSSLC*RREKKAQRPTASWK
Trigger: CTTCCAGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp CACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCTaGGCCTCAGTGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGG +
Preference number: 1 (lower is better)
Translates to: HWAESCPDVPWVLGA*ASVAGGQRDIPSHW
Trigger: CCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCACTGAGGCCCAGGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR TCA 90 bp GGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTaGTCAGGGAAGGTGGACCCCCAGGGAGGAGGAGGCAAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: GQRDIPSHWRLEPEL*SGKVDPQGGGGKAS
Trigger: ACTGGCCTTGCCTCCTCCTCCCTGGGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 90 bp GTCCCTGGCACCTACTTGTTCGTGAGGAGATTCCTGGCCTCAGGCTaGCGTCCCATGTGGGTGGGTGCAGCTGGAGAGAGACGTAGGGGT +
Preference number: 1 (lower is better)
Translates to: VPGTYLFVRRFLASG*RPMWVGAAGERRRG
Trigger: ACCCCTACGTCTCTCTCCAGCTGCACCCACCCACATGGGACGGCAGCCTGAGGCCAGGAATCTCCTCACGAACAAGTAGGTGCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp CCTCAGTGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTaGAACCAGAGCTCTGATCAGGGAAGGTGGACCCCCAGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: PQWLVGKGTSQVTGG*NQSSDQGRWTPREE
Trigger: CTCCTCCCTGGGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCACTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp GATGCACAGACAGGAGAGGTGGACTCCAGCCAGTGTGGGGTGCCCTaGGCAGAAACTGGGGTGATCCTTGACCACCTCGGGCCTGATCAG +
Preference number: 1 (lower is better)
Translates to: DAQTGEVDSSQCGVP*AETGVILDHLGPDQ
Trigger: CTGATCAGGCCCGAGGTGGTCAAGGATCACCCCAGTTTCTGCCCAGGGCACCCCACACTGGCTGGAGTCCACCTCTCCTGTCTGTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp ACGCTCCTGACCACACCCAGGCCACATGTGCTTAGTTCTGTCCACTaGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCTGG +
Preference number: 1 (lower is better)
Translates to: TLLTTPRPHVLSSVH*AESCPDVPWVLGAW
Trigger: CCAGGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTGGCCTGGGTGTGGTCAGGAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp GAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGTaGCCTCTGAGACCACAGGAAGTGACTGACCGTTGCTGGGTGAGT +
Preference number: 1 (lower is better)
Translates to: ECLRTAHPSRWPPGR*PLRPQEVTDRCWVS
Trigger: ACTCACCCAGCAACGGTCAGTCACTTCCTGTGGTCTCAGAGGCCACCTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 90 bp TGGATGTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTaGCCCCCAGGCAGGTGGCCTCTGAGACCACAGGAAGTGACTGAC +
Preference number: 1 (lower is better)
Translates to: WMCHLECLRTAHPSR*PPGRWPLRPQEVTD
Trigger: GTCAGTCACTTCCTGTGGTCTCAGAGGCCACCTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCACATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCCCCTGCCTGGCCCACTaGTGCTCCCTGGAAAGGGTC +
Preference number: 2 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPPCLAH*CSLERV
Trigger: GACCCTTTCCAGGGAGCACCAGTGGGCCAGGCAGGG...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCTGTCCTGATGTACCCTaGGTCCTGGGAGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPCPDVP*VLGAWA
Trigger: GGCCCAGGCTCCCAGGACCCAGGGTACATCAGGACA...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCGCCTCCTGCGGCCCCTaGGAGATGGGCACCCACTGG +
Preference number: 2 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTASCGP*EMGTHW
Trigger: CCAGTGGGTGCCCATCTCTCAGGGGCCGCAGGAGGC...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCCGGAGGTTGCAGAGCTaGTGGGGGACGGAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPRRLQS*WGTEKC
Trigger: ACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCG...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCACGCCACGCCCAGCCTaGCGTGGGAGGCCTAGGTCT +
Preference number: 2 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCTPRPA*RGRPRS
Trigger: AGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGT...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCCACCTCTGTGGCTGTTaGGGTTCACCCCACCCGAAG +
Preference number: 2 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPHLCGC*GSPHPK
Trigger: CTTCGGGTGGGGTGAACCGCAACAGCCACAGAGGTG...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCGGCCTCAGTGGCTGGTaGGCAAAGGGACATCCCAAG +
Preference number: 2 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPGLSGW*AKGHPK
Trigger: CTTGGGATGTCCCTTTGCCCACCAGCCACTGAGGCC...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CAA 90 bp GGCCTCCTGCGGCCCCTGAGAGATGGGCACCCACTGGAGCGGAGGTaGCAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GLLRPLRDGHPLERR*QSCWGTEKCTSVLQ
Trigger: CTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCTCAGGGGCCGCAGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCAGCCCTGGATGCAGATaGCTGGGGCACAGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACSPGCR*LGHRPP
Trigger: AGGAGGCCTGTGCCCCAGGCATCTGCATCCAGGGCT...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCACTGCACAGGCCACTaGTGGGCACCCCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADHCTGH*WAPLAG
Trigger: CCCAGCCAGGGGTGCCCAGCAGTGGCCTGTGCAGTG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACACAGTGAGACCAGGGTaGGCGTGCGGGAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADTVRPG*ACGRPS
Trigger: GCTGGGCCTCCCGCACGCCCACCCTGGTCTCACTGT...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCAGAGACCCCTGCCTaGCCCACTGGTGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADPETPA*PTGAPW
Trigger: CCAGGGAGCACCAGTGGGCCAGGCAGGGGTCTCTGG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCTGGAGGGGTCCGAGTaGGGCGGGTGCCCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADLEGSE*GGCPSE
Trigger: TTCACTGGGGCACCCGCCCCACTCGGACCCCTCCAG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACGGGAGAAGGGGGAGCTaGAGGTCTGCGGGTACTGCC +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADGRRGS*RSAGTA
Trigger: GGCAGTACCCGCAGACCTTCAGCTCCCCCTTCTCCC...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCCAGTCTCCTGTTCAGTaGACGCCACGCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCQSPVQ*TPRPAC
Trigger: GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTG...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCCATTCCAGAGACCCCTaGCTGGCCCACTGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCHSRDP*LAHWCS
Trigger: GGAGCACCAGTGGGCCAGGCAGGGGTCTCTGGAATG...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCCAGCCAGTGTGGGGTaGCCTGGGCAGAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: WECICRWGATTAGTGWACPASVG*PGQKLG
Trigger: CCCCAGTTTCTGCCCAGGGCACCCCACACTGGCTGG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTTCCGAGTGGGGCGGGTaGCCCAGTGAAGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: WECICRWGATTAGTGWACSEWGG*PSEAQH
Trigger: GTGCTGAGCTTCACTGGGGCACCCGCCCCACTCGGA...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTCACTGCACAGGCCACTaGTGGGCACCCCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAHCTGH*WAPLAG
Trigger: CCCAGCCAGGGGTGCCCAGCAGTGGCCTGTGCAGTG...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCTCGGTCCTCCAGCCCTaGATGCAGATGCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCSVLQP*MQMPGA
Trigger: TGCCCCAGGCATCTGCATCCAGGGCTGGAGGACCGA...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCGGCTGCCGTCCCATGTaGGTGGGTGCAGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTGCRPM*VGAAGE
Trigger: CTCTCCAGCTGCACCCACCCACATGGGACGGCAGCC...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCGGCCCACGGCCAGCTaGAAGAGGGCAGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQRPTAS*KRAAWA
Trigger: GGCCCAGGCTGCCCTCTTCCAGCTGGCCGTGGGCCG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CAA 90 bp AGGGAAATGCAAGGCTGGAGGGCAGTGCTGGGCACAGACCTGGGTTaGGCGCAGAAGCCTGACCTGACTCAGGGCCGGATGGTCTCCCCG +
Preference number: 2 (lower is better)
Translates to: REMQGWRAVLGTDLG*AQKPDLTQGRMVSP
Trigger: CGGGGAGACCATCCGGCCCTGAGTCAGGTCAGGCTTCTGCGCCAAACCCAGGTCTGTGCCCAGCACTGCCCTCCAGCCTTGCATTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCGGCTCAGCAGACAAGTaGAGGAGGAGCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGGSADK*RRSPPW
Trigger: CCAGGGTGGGCTCCTCCTTCACTTGTCTGCTGAGCC...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACGGGCAGAAACTGGGGTaGTCCTTGACCACCTCGGGC +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADGQKLG*SLTTSG
Trigger: GCCCGAGGTGGTCAAGGATCACCCCAGTTTCTGCCC...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCCTGACCGTTGCTGGGTaGGTGGGGCTGGGATCTGGG +
Preference number: 2 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCLTVAG*VGLGSG
Trigger: CCCAGATCCCAGCCCCACTCACCCAGCAACGGTCAG...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACAAGGTCTGCGGGTACTaGCACGGCCCTGGGCATGTC +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADKVCGY*HGPGHV
Trigger: GACATGCCCAGGGCCGTGGCAGTACCCGCAGACCTT...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCTCCACAGTGGCAGGTaGCAGCCCCAGGGACACCTG +
Preference number: 2 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRLHSGR*QPQGHL
Trigger: CAGGTGTCCCTGGGGCTGGCACCTGCCACTGTGGAG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCTGCCCAGTCCTGGGGTaGCAGTGGCTGTGGACAGCA +
Preference number: 2 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTCPVLG*QWLWTA
Trigger: TGCTGTCCACAGCCACTGGCACCCCAGGACTGGGCA...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTTGCCCAGTCCTGGGGTaGCAGTGGCTGTGGACAGCA +
Preference number: 2 (lower is better)
Translates to: WECICRWGATTAGTGWACCPVLG*QWLWTA
Trigger: TGCTGTCCACAGCCACTGGCACCCCAGGACTGGGCA...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCACAGTGAGACCAGGGTaGGCGTGCGGGAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPTVRPG*ACGRPS
Trigger: GCTGGGCCTCCCGCACGCCCACCCTGGTCTCACTGT...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCCTGGGCATGTCCTGTaGGCAGCAGGCTGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: WECICRWGATTAGTGWACPGHVL*AAGCPE
Trigger: TTCAGGGCAGCCTGCTGCCCACAGGACATGCCCAGG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCCCTGGGCATGTCCTGTaGGCAGCAGGCTGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGPGHVL*AAGCPE
Trigger: TTCAGGGCAGCCTGCTGCCCACAGGACATGCCCAGG...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGGCTGCCGTCCCATGTaGGTGGGTGCAGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQGCRPM*VGAAGE
Trigger: CTCTCCAGCTGCACCCACCCACATGGGACGGCAGCC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCTGCACCCCAGAGCACTaGGGAAGCTCCAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGCTPEH*GSSRQL
Trigger: CAGCTGCCTGGAGCTTCCCCAGTGCTCTGGGGTGCA...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTACGCCACGCCCAGCCTaGCGTGGGAGGCCTAGGTCT +
Preference number: 2 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSTPRPA*RGRPRS
Trigger: AGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGT...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCCTGTGGGCAGCAGGCTaGCCTGAAATGGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGLWAAG*PEMAVA
Trigger: AGCCACAGCCATTTCAGGGCAGCCTGCTGCCCACAG...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCAGCCCACCCAGCTCCTaGTGTTCCCAGGGGACTCAG +
Preference number: 2 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCSPPSS*CSQGTQ
Trigger: CTGAGTCCCCTGGGAACAGCAGGAGCTGGGTGGGCT...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCCGAGTGGGGCGGGTaGCCCAGTGAAGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPSEWGG*PSEAQH
Trigger: GTGCTGAGCTTCACTGGGGCACCCGCCCCACTCGGA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCAGGAGGAGCCCACCCTaGCCCCAAGAGGAGTGTGTA +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGRRSPP*PQEECV
Trigger: TACACACTCCTCTTGGGGCCAGGGTGGGCTCCTCCT...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCGTGACTGACCGTTGCTaGGTGAGTGGGGCTGGGATC +
Preference number: 2 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTVTDRC*VSGAGI
Trigger: GATCCCAGCCCCACTCACCCAGCAACGGTCAGTCAC...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTTTTGGCGCAGAAGCCTaGCCTGACTCAGGGCCGGAT +
Preference number: 2 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAFGAEA*PDSGPD
Trigger: ATCCGGCCCTGAGTCAGGTCAGGCTTCTGCGCCAAA...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCTTGGAACCAGAGCTCTaGTCAGGGAAGGTGGACCCC +
Preference number: 2 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTLEPEL*SGKVDP
Trigger: GGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAA...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACTGGCTGTGGCTCAGCTaGGCTGAGGAGACATTCCAG +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADWLWLS*AEETFQ
Trigger: CTGGAATGTCTCCTCAGCTCAGCTGAGCCACAGCCA...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCACCACAGGAAGTGACTaGCCGTTGCTGGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGTTGSD*PLLGEW
Trigger: CCACTCACCCAGCAACGGTCAGTCACTTCCTGTGGT...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTTGCACAGCACTCAGGTaGGACGATGTCCAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: WECICRWGATTAGTGWACCTALR*DDVQAP
Trigger: TGGAGCCTGGACATCGTCTCACCTGAGTGCTGTGCA...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCCAGTCTCCTGTTCAGTaGACGCCACGCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: SSVHWAESCPDVPWVLGAQSPVQ*TPRPAC
Trigger: GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTG...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGACCCCATGGCCCACTaGACAGGCCACTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQDPMAH*TGHCWA
Trigger: TGCCCAGCAGTGGCCTGTGCAGTGGGCCATGGGGTC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCGGTCCTCCAGCCCTaGATGCAGATGCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPSVLQP*MQMPGA
Trigger: TGCCCCAGGCATCTGCATCCAGGGCTGGAGGACCGA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGAGATGGGCACCCACTaGAGCGGAGGTTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: GSAGKPESLRDPHEKSSREMGTH*SGGCRA
Trigger: AGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTC...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGAGATGGGCACCCACTaGAGCGGAGGTTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQEMGTH*SGGCRA
Trigger: AGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTAGGCCCAGCGGTGTGTaGTGGAGGGAAATGCAAGGC +
Preference number: 2 (lower is better)
Translates to: IAASVAGGKRRPSGPRPARPSGV*WREMQG
Trigger: GCCTTGCATTTCCCTCCACCACACACCGCTGGGCCT...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACAGCTCTGACCCTTCCTaGACTCCAAGGCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADSSDPS*TPRQSH
Trigger: GTGGCTCTGCCTTGGAGTCCAGGAAGGGTCAGAGCT...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCCCTGCCTGGCCCACTaGTGCTCCCTGGAAAGGGTC +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQPCLAH*CSLERV
Trigger: GACCCTTTCCAGGGAGCACCAGTGGGCCAGGCAGGG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCTCCAGGCCTGTCCCTaGGGCCGTGGACTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKLQACP*GRGLAQ
Trigger: CTGGGCAAGTCCACGGCCCCAGGGACAGGCCTGGAG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTCAGTGTGGGGTGCCCTaGGCAGAAACTGGGGTGATC +
Preference number: 2 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAQCGVP*AETGVI
Trigger: GATCACCCCAGTTTCTGCCCAGGGCACCCCACACTG...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGTGACTGACCGTTGCTaGGTGAGTGGGGCTGGGATC +
Preference number: 2 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCVTDRC*VSGAGI
Trigger: GATCCCAGCCCCACTCACCCAGCAACGGTCAGTCAC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCAAGGGCCGACCCCATaGCCCACTGCACAGGCCACT +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQQGPTP*PTAQAT
Trigger: AGTGGCCTGTGCAGTGGGCCATGGGGTCGGCCCTTG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGTGGAAGAGGGCAGCCTaGGCCCAGACTGCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQWKRAA*AQTAVG
Trigger: TCCCACCGCAGTCTGGGCCCAGGCTGCCCTCTTCCA...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CAA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTaGCTCACAGGGAGGGGTGCAGGTAGGAGTGCCAGCTCTGACCCT +
Preference number: 2 (lower is better)
Translates to: LWLLRFTPPEARQAL*LTGRGAGRSASSDP
Trigger: AGGGTCAGAGCTGGCACTCCTACCTGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCGCAGAAGCCTGACCTaGCTCAGGGCCGGATGGTCT +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQRRSLT*LRAGWS
Trigger: AGACCATCCGGCCCTGAGTCAGGTCAGGCTTCTGCG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCGCCACTTGGAATGTCTaGGAACCGCACATCCCAGCA +
Preference number: 2 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGATWNV*EPHIPA
Trigger: TGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGC...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCTAGGCAAGCTCTTTTaGTCACAGGGAGGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTLGKLF*SQGGVQ
Trigger: CTGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAG...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCCAGCAGCCTTCCATCTaGAGGGAGGCTCAGCAGACA +
Preference number: 2 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCQQPSI*REAQQT
Trigger: TGTCTGCTGAGCCTCCCTGCAGATGGAAGGCTGCTG...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGAGCTCTGACCCTTCCTaGACTCCAAGGCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQSSDPS*TPRQSH
Trigger: GTGGCTCTGCCTTGGAGTCCAGGAAGGGTCAGAGCT...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCCCCTCCCACCTCTGTaGCTGTTGCGGTTCACCCCA +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQPLPPL*LLRFTP
Trigger: TGGGGTGAACCGCAACAGCCACAGAGGTGGGAGGGG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGCCGTCCCATGTGGGTaGGTGCAGCTGGAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQAVPCG*VQLERD
Trigger: GTCTCTCTCCAGCTGCACCCACCCACATGGGACGGC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCCGTTGCTGGGTGAGTaGGGCTGGGATCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQPLLGE*GWDLGK
Trigger: CTTCCCCAGATCCCAGCCCCACTCACCCAGCAACGG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCGACAGGCTGGGCATGTaGTCCTGCACAGCACTCAGG +
Preference number: 2 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPDRLGM*SCTALR
Trigger: CCTGAGTGCTGTGCAGGACCACATGCCCAGCCTGTC...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCACCCAGGCCACATGTaGTTAGTTCTGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRHPGHM*LVLSTG
Trigger: CCCAGTGGACAGAACTAAGCACATGTGGCCTGGGTG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTCCCAGCGGTGTGTGGTaGAGGGAAATGCAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSPSGVW*REMQGW
Trigger: CCAGCCTTGCATTTCCCTCCACCACACACCGCTGGG...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGACATCCCAAGTCACTaGCGGTTGGAACCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQDIPSH*RLEPEL
Trigger: GAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCAGCAATGTGTCCCTaGCACCTACTTGTTCGTGAG +
Preference number: 2 (lower is better)
Translates to: AGKPESLRDPHEKSSRADPAMCP*HLLVRE
Trigger: CTCACGAACAAGTAGGTGCCAGGGACACATTGCTGG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCAGCTACAGGAAGGGTaGGGTTGCACCCTGCACCCC +
Preference number: 2 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKQLQEG*GCTLHP
Trigger: GGGGTGCAGGGTGCAACCCCACCCTTCCTGTAGCTG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTGCTGGGACCTGGATGTaGCACTTGGAATGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAAGTWM*HLECLR
Trigger: TCTCAGACATTCCAAGTGGCACATCCAGGTCCCAGC...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGGGCCTCAGTGGCTGGTaGGCAAAGGGACATCCCAAG +
Preference number: 2 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKGLSGW*AKGHPK
Trigger: CTTGGGATGTCCCTTTGCCCACCAGCCACTGAGGCC...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCAGTGTGGGGTGCCCTaGGCAGAAACTGGGGTGATC +
Preference number: 2 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKQCGVP*AETGVI
Trigger: GATCACCCCAGTTTCTGCCCAGGGCACCCCACACTG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR TCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTTTTGGCGCAGAAGCCTaGCCTGACTCAGGGCCGGAT +
Preference number: 2 (lower is better)
Translates to: KGHPKSLAVGTRALIREGFGAEA*PDSGPD
Trigger: ATCCGGCCCTGAGTCAGGTCAGGCTTCTGCGCCAAA...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTCGGAGGTTGCAGAGCTaGTGGGGGACGGAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: KGHPKSLAVGTRALIREGRRLQS*WGTEKC
Trigger: ACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCG...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR GCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCTAGGCAAGCTCTTTTaGTCACAGGGAGGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQLGKLF*SQGGVQ
Trigger: CTGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTGCTGGGCACAGACCTaGGTTTGGCGCAGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGCWAQT*VWRRSL
Trigger: CAGGCTTCTGCGCCAAACCCAGGTCTGTGCCCAGCA...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGAGGCCCAGCGGTGTGTaGTGGAGGGAAATGCAAGGC +
Preference number: 2 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRRPSGV*WREMQG
Trigger: GCCTTGCATTTCCCTCCACCACACACCGCTGGGCCT...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCCAGCAATGTGTCCCTaGCACCTACTTGTTCGTGAG +
Preference number: 2 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPPAMCP*HLLVRE
Trigger: CTCACGAACAAGTAGGTGCCAGGGACACATTGCTGG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCTTAGTTCTGTCCACTaGGCAGAGTCCTGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQLSSVH*AESCPD
Trigger: ATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 72 bp GGGCAGCCTGGGCCCAGACTGCGGTGGGAGTGCATCTaGAGATGGGGTGCGACCACCGCTGGGACAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GQPGPRLRWECI*RWGATTAGTGW
Trigger: CCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCACCGCAGTCTGGGCCCAGGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 72 bp TCAAGGGCCGACCCCATGGCCCACTGCACAGGCCACTaGTGGGCACCCCTGGCTGGGACCTGGATGTGCCAC +
Preference number: 3 (lower is better)
Translates to: SRADPMAHCTGH*WAPLAGTWMCH
Trigger: GTGGCACATCCAGGTCCCAGCCAGGGGTGCCCAGCAGTGGCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCCCACTGGAGCGGAGGTaGCAGAGCTGCTGGGGGACG +
Preference number: 3 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCPLERR*QSCWGT
Trigger: CGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGG...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 72 bp TGCTGGGAGAAGGGGGAGCTGAAGGTCTGCGGGTACTaGCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: CWEKGELKVCGY*HGPGHVLWAAG
Trigger: GCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACCTTCAGCTCCCCCTTCTCCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 72 bp GGAAGAGGGCAGCCTGGGCCCAGACTGCGGTGGGAGTaGATCTGCAGATGGGGTGCGACCACCGCTGGGACA +
Preference number: 3 (lower is better)
Translates to: GRGQPGPRLRWE*ICRWGATTAGT
Trigger: TGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCACCGCAGTCTGGGCCCAGGCTGCCCTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp AGACCAGGGTGGGCGTGCGGGAGGCCCAGCGGTGTGTaGTGGAGGGAAATGCAAGGCTGGAGGGCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: RPGWACGRPSGV*WREMQGWRAVL
Trigger: CAGCACTGCCCTCCAGCCTTGCATTTCCCTCCACCACACACCGCTGGGCCTCCCGCACGCCCACCCTGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp CCTGTCCCTGGGGCCGTGGACTTGCCCAGCATAGCATaGGCACTCCACAGTGGCAGGTGCCAGCCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: PVPGAVDLPSIA*ALHSGRCQPQG
Trigger: TCCCTGGGGCTGGCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 72 bp ACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTaGCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: TQSPVQCTPRPA*RGRPRSSPRPP
Trigger: AGGAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCGCAGCTGCCAGGGCCTaGTCTTCAGGGCCAGGGACA +
Preference number: 3 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTAAARA*SSGPGT
Trigger: TGTCCCTGGCCCTGAAGACAAGGCCCTGGCAGCTGC...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp GATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTaGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCC +
Preference number: 3 (lower is better)
Translates to: DGHPLERRLQSC*GTEKCTSVLQP
Trigger: GGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp GTGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTaGGACAGGCTGGGCATGTGGTCCTGCACAGCACTC +
Preference number: 3 (lower is better)
Translates to: VGVHLQMGCDHR*DRLGMWSCTAL
Trigger: GAGTGCTGTGCAGGACCACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR TCA 72 bp CCAGCCAGTGTGGGGTGCCCTGGGCAGAAACTGGGGTaGTCCTTGACCACCTCGGGCCTGATCAGCTACAGG +
Preference number: 3 (lower is better)
Translates to: PASVGCPGQKLG*SLTTSGLISYR
Trigger: CCTGTAGCTGATCAGGCCCGAGGTGGTCAAGGATCACCCCAGTTTCTGCCCAGGGCACCCCACACTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCGCTAGGCAAGCTCTTTaGCTCACAGGGAGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTARQAL*LTGRGA
Trigger: TGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAGC...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR TCA 72 bp GACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTaGTCAGGGAAGGTGGACCCCCAGGGAGGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: DIPSHWRLEPEL*SGKVDPQGGGG
Trigger: GCCTCCTCCTCCCTGGGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR GCA 72 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTaGTGGGGGACGGAGAAGTGTACATCGGTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: RDGHPLERRLQS*WGTEKCTSVLQ
Trigger: CTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCTTGGCCAAAAAGTCTaGCTGGGAGAAGGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTLGQKV*LGEGGA
Trigger: AGCTCCCCCTTCTCCCAGCAAGACTTTTTGGCCAAG...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp CTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTaGAACCAGAGCTCTGATCAGGGAAGGTGGACCCCC +
Preference number: 3 (lower is better)
Translates to: LVGKGTSQVTGG*NQSSDQGRWTP
Trigger: GGGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGTCCCTGGCACCTACTaGTTCGTGAGGAGATTCCTG +
Preference number: 3 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCVPGTY*FVRRFL
Trigger: CAGGAATCTCCTCACGAACAAGTAGGTGCCAGGGAC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGAGGGGGACCTAGGCTaGGCCAAAAAGTCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQEGDLG*AKKSCW
Trigger: CCAGCAAGACTTTTTGGCCAAGCCTAGGTCCCCCTC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp ACCACACCCAGGCCACATGTGCTTAGTTCTGTCCACTaGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: TTPRPHVLSSVH*AESCPDVPWVL
Trigger: CAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTGGCCTGGGTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR-3UTR CAA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGACCTGGATGTGCCACTaGGAATGTCTGAGAACCGCA +
Preference number: 3 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQTWMCH*ECLRTA
Trigger: TGCGGTTCTCAGACATTCCAAGTGGCACATCCAGGT...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CCA 72 bp GGGACTTACTCGCTCTGCAGCCCCCTCTCCAGTCTATaGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: GTYSLCSPLSSL*DIAASVAGGKR
Trigger: TCTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCCGGCCCACGGCCAGCTaGAAGAGGGCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACRPTAS*KRAAWA
Trigger: GGCCCAGGCTGCCCTCTTCCAGCTGGCCGTGGGCCG...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCGGGAGCGGGCTGGCCTaGAGTGTGCGTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLGSGLA*SVRWQA
Trigger: TGCCTGCCAACGCACACTCCAGGCCAGCCCGCTCCC...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCGAGGCCCTGGGCACTTaGACCAGAATCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPEALGT*TRIALR
Trigger: GCGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTC...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCAGCTGGCTGGATTGCTaGAGCTTACGGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPSWLDC*SLRQPA
Trigger: GGCCGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCT...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCAGCCCACCCAGCTCCTaGTGTTCCCAGGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPSPPSS*CSQGTQ
Trigger: CTGAGTCCCCTGGGAACAGCAGGAGCTGGGTGGGCT...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCCCTCCAGGACTGACCTaGACATGGACACGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPPPGLT*TWTRGV
Trigger: CACGCCCCGTGTCCATGTCCAGGTCAGTCCTGGAGG...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCGGGTGTCCAGGCTCATaGCACAGGCCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACGCPGS*HRPPGP
Trigger: GGGGCCTGGAGGCCTGTGCCATGAGCCTGGACACCC...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCGGCTCCCGGAGGCCCTaGGCACTTGCACCAGAATCG +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLGSRRP*ALAPES
Trigger: CGATTCTGGTGCAAGTGCCCAGGGCCTCCGGGAGCC...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCCCTGGGCATGTCCTGTaGGCAGCAGGCTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPPGHVL*AAGCPE
Trigger: TTCAGGGCAGCCTGCTGCCCACAGGACATGCCCAGG...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCTCGGTCCTCCAGCCCTaGATGCAGATGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLSVLQP*MQMPGA
Trigger: TGCCCCAGGCATCTGCATCCAGGGCTGGAGGACCGA...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCGAGATGGGCACCCACTaGAGCGGAGGTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPEMGTH*SGGCRA
Trigger: AGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTC...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCTGCTGGGCACAGACCTaGGTTTGGCGCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPCWAQT*VWRRSL
Trigger: CAGGCTTCTGCGCCAAACCCAGGTCTGTGCCCAGCA...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCGCCGTCCCATGTGGGTaGGTGCAGCTGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLAVPCG*VQLERD
Trigger: GTCTCTCTCCAGCTGCACCCACCCACATGGGACGGC...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCTGCACCCCAGAGCACTaGGGAAGCTCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLCTPEH*GSSRQL
Trigger: CAGCTGCCTGGAGCTTCCCCAGTGCTCTGGGGTGCA...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCTGGAAGAGGGCAGCCTaGGCCCAGACTGCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACWKRAA*AQTAVG
Trigger: TCCCACCGCAGTCTGGGCCCAGGCTGCCCTCTTCCA...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCCGGCCCACGGCCAGCTaGAAGAGGGCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCRPTAS*KRAAWA
Trigger: GGCCCAGGCTGCCCTCTTCCAGCTGGCCGTGGGCCG...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCGCCACCCACACGCTCTaGCACTGCGTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCATHTL*HCVSWV
Trigger: CACCCAGGAGACGCAGTGTCAGAGCGTGTGGGTGGC...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTGCCTCCTGCGGCCCCTaGGAGATGGGCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAASCGP*EMGTHW
Trigger: CCAGTGGGTGCCCATCTCTCAGGGGCCGCAGGAGGC...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCTCCTGCGGCCCCTaGGAGATGGGCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRASCGP*EMGTHW
Trigger: CCAGTGGGTGCCCATCTCTCAGGGGCCGCAGGAGGC...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCCTGACCGTTGCTGGGTaGGTGGGGCTGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCLTVAG*VGLGSG
Trigger: CCCAGATCCCAGCCCCACTCACCCAGCAACGGTCAG...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCCCGCAGGCGCTCATaGAGGGTGATGGAGGCGCGT +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTPRRRS*RVMEAR
Trigger: ACGCGCCTCCATCACCCTGCATGAGCGCCTGCGGGG...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCGCACCAGAATCGCCTTaGGCCTCCGGTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACAPESP*ASGPPS
Trigger: ACTGGGTGGACCGGAGGCGCAAGGCGATTCTGGTGC...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCACTGCACAGGCCACTaGTGGGCACCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKHCTGH*WAPLAG
Trigger: CCCAGCCAGGGGTGCCCAGCAGTGGCCTGTGCAGTG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCGGGACTTACTCGCTCTaGAGCCCCCTCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPGTYSL*SPLSSL
Trigger: TAGACTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCC...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCATGTTCCGGTTCCTGTaGCTCCTGCAGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPMFRFL*LLQAKP
Trigger: GGGCTTTGCCTGCAGGAGCCACAGGAACCGGAACAT...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGGTGGGAGGCCCTaGCCACCCACACGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRAGGRP*PPTRSD
Trigger: GTCAGAGCGTGTGGGTGGCCAGGGCCTCCCACCGGC...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGCCGGTGGGAGGCCCTaGCCACCCACACGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQAGGRP*PPTRSD
Trigger: GTCAGAGCGTGTGGGTGGCCAGGGCCTCCCACCGGC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCGATGCACCAGCTGGCTaGATTGCTGCAGCTTACGGC +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPDAPAG*IAAAYG
Trigger: GCCGTAAGCTGCAGCAATCCAGCCAGCTGGTGCATC...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCTGCTGGGCACAGACCTaGGTTTGGCGCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLCWAQT*VWRRSL
Trigger: CAGGCTTCTGCGCCAAACCCAGGTCTGTGCCCAGCA...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCCCCACTGGTGCTCCCTaGAAAGGGTCTCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACPTGAP*KGSPEA
Trigger: GGCCTCTGGAGACCCTTTCCAGGGAGCACCAGTGGG...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCTCCAGGCCTGTCCCTaGGGCCGTGGACTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTLQACP*GRGLAQ
Trigger: CTGGGCAAGTCCACGGCCCCAGGGACAGGCCTGGAG...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCGAAGCTGAGACCCTCTaGAGGGGTCCGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCEAETL*RGPSGA
Trigger: CGCCCCACTCGGACCCCTCCAGAGGGTCTCAGCTTC...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCCCAGGCTCCAGAGGGTaGCTCAGCGGGGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGPGSRG*LSGEAG
Trigger: TCCGGCTTCCCCGCTGAGCCACCCTCTGGAGCCTGG...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGGGCGCTCATGCAGGGTaGTGGAGGCGCGTACACGCA +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKGAHAG*WRRVHA
Trigger: TGCGTGTACGCGCCTCCATCACCCTGCATGAGCGCC...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGGGGAGAAGGGGGAGCTaGAGGTCTGCGGGTACTGCC +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKGRRGS*RSAGTA
Trigger: GGCAGTACCCGCAGACCTTCAGCTCCCCCTTCTCCC...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCGTGATCTGCTGGAGGTaGCCTTTGCTAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACVICWR*PLLGRG
Trigger: CCCCCTCCCTAGCAAAGGTCACCTCCAGCAGATCAC...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCAGCCCCAGGGACACCTaGCCAGCAGGTGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGSPRDT*PAGGHC
Trigger: GCAATGGCCACCTGCTGGTCAGGTGTCCCTGGGGCT...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGGGGCGGGTGCCCCAGTaGAGCTCAGCACCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKGRVPQ*SSAPKD
Trigger: ATCCTTGGGTGCTGAGCTTCACTGGGGCACCCGCCC...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACGGGCGGGTGCCCCAGTaGAGCTCAGCACCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADGRVPQ*SSAPKD
Trigger: ATCCTTGGGTGCTGAGCTTCACTGGGGCACCCGCCC...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCTGACCGTTGCTGGGTaGGTGGGGCTGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKLTVAG*VGLGSG
Trigger: CCCAGATCCCAGCCCCACTCACCCAGCAACGGTCAG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCACCACAGGAAGTGACTaGCCGTTGCTGGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLTTGSD*PLLGEW
Trigger: CCACTCACCCAGCAACGGTCAGTCACTTCCTGTGGT...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGCCCCGCAGGCGCTCATaGAGGGTGATGGAGGCGCGT +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQPRRRS*RVMEAR
Trigger: ACGCGCCTCCATCACCCTGCATGAGCGCCTGCGGGG...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCACTGGAGCGGAGGTTaGAGAGCTGCTGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACHWSGG*RAAGGR
Trigger: CCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGACGCCACGCCCAGCCTaGCGTGGGAGGCCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRTPRPA*RGRPRS
Trigger: AGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGT...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCTCCACAGTGGCAGGTaGCAGCCCCAGGGACACCTG +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACLHSGR*QPQGHL
Trigger: CAGGTGTCCCTGGGGCTGGCACCTGCCACTGTGGAG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCTCCACAGTGGCAGGTaGCAGCCCCAGGGACACCTG +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKLHSGR*QPQGHL
Trigger: CAGGTGTCCCTGGGGCTGGCACCTGCCACTGTGGAG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGGACCCCATGGCCCACTaGACAGGCCACTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKDPMAH*TGHCWA
Trigger: TGCCCAGCAGTGGCCTGTGCAGTGGGCCATGGGGTC...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCTCCACGAGGTGCCTCTaGTCCAGCTGGACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGSTRCL*SSWTPQ
Trigger: CTGCGGGGTCCAGCTGGACCAGAGGCACCTCGTGGA...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCTGAAGGGAGCGGGCTaGCCTGGAGTGTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKLKGAG*PGVCVG
Trigger: GCCAACGCACACTCCAGGCCAGCCCGCTCCCTTCAG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCTGAAGGGAGCGGGCTaGCCTGGAGTGTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACLKGAG*PGVCVG
Trigger: GCCAACGCACACTCCAGGCCAGCCCGCTCCCTTCAG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCCCCAGCGGTGTGTGGTaGAGGGAAATGCAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACPSGVW*REMQGW
Trigger: CCAGCCTTGCATTTCCCTCCACCACACACCGCTGGG...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCTGTCCTGATGTACCCTaGGTCCTGGGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCCPDVP*VLGAWA
Trigger: GGCCCAGGCTCCCAGGACCCAGGGTACATCAGGACA...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCCCTGCCTGGCCCACTaGTGCTCCCTGGAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACPCLAH*CSLERV
Trigger: GACCCTTTCCAGGGAGCACCAGTGGGCCAGGCAGGG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCCAGAGACCCCTGCCTaGCCCACTGGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQPETPA*PTGAPW
Trigger: CCAGGGAGCACCAGTGGGCCAGGCAGGGGTCTCTGG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTGCACGCCACGCCCAGCCTGCCGTGGGAGGCCTAGGTCTAGTCCTCGGCCTCTTGCCCAGCATAGCATaGGCACTCCACAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SARHAQPAVGGLGLVLGLLPSIA*ALHSGR
Trigger: CCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAA...GAGGCCGAGGACTAGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGTGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCAGGGGTGGTACTGGCTaGGACACCACCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGRGGTG*DTTSQP
Trigger: GGGCTGGGAGGTGGTGTCCCAGCCAGTACCACCCCT...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGGGCTGCCGTCCCATGTaGGTGGGTGCAGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKGCRPM*VGAAGE
Trigger: CTCTCCAGCTGCACCCACCCACATGGGACGGCAGCC...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCTGCACCCCAGAGCACTaGGGAAGCTCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCCTPEH*GSSRQL
Trigger: CAGCTGCCTGGAGCTTCCCCAGTGCTCTGGGGTGCA...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCAAGGGCCGACCCCATaGCCCACTGCACAGGCCACT +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACQGPTP*PTAQAT
Trigger: AGTGGCCTGTGCAGTGGGCCATGGGGTCGGCCCTTG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CAA 72 bp CGGCCCCTGAGAGATGGGCACCCACTGGAGCGGAGGTaGCAGAGCTGCTGGGGGACGGAGAAGTGTACATCG +
Preference number: 4 (lower is better)
Translates to: RPLRDGHPLERR*QSCWGTEKCTS
Trigger: CGATGTACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCTCAGGGGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGGGAGAAGGGGGAGCTaGAGGTCTGCGGGTACTGCC +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCGRRGS*RSAGTA
Trigger: GGCAGTACCCGCAGACCTTCAGCTCCCCCTTCTCCC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACGGCTCAGCAGACAAGTaGAGGAGGAGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADGSADK*RRSPPW
Trigger: CCAGGGTGGGCTCCTCCTTCACTTGTCTGCTGAGCC...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCGGGCAGAAACTGGGGTaGTCCTTGACCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGGQKLG*SLTTSG
Trigger: GCCCGAGGTGGTCAAGGATCACCCCAGTTTCTGCCC...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGGGATCTGGGGAAGCTaGGACCCTCTGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCGIWGS*DPLEGS
Trigger: GGACCCCTCCAGAGGGTCTCAGCTTCCCCAGATCCC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGGGATCTGGGGAAGCTaGGACCCTCTGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQGIWGS*DPLEGS
Trigger: GGACCCCTCCAGAGGGTCTCAGCTTCCCCAGATCCC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGGAGGCCCTGGGCACTTaGACCAGAATCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKEALGT*TRIALR
Trigger: GCGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTC...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCAGCTGGCTGGATTGCTaGAGCTTACGGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGSWLDC*SLRQPA
Trigger: GGCCGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCT...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCACCAGCTGGCTGGATTaGTGCAGCTTACGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCTSWLD*CSLRQP
Trigger: CGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGT...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGTGCCTGGCCCACTGGTaGTCCCTGGAAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKCLAHW*SLERVS
Trigger: GGAGACCCTTTCCAGGGAGCACCAGTGGGCCAGGCA...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTAAGGTCTGCGGGTACTaGCACGGCCCTGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACKVCGY*HGPGHV
Trigger: GACATGCCCAGGGCCGTGGCAGTACCCGCAGACCTT...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACTTCCTGGCCTCAGGCTaGCGTCCCATGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADFLASG*RPMWVG
Trigger: ACCCACCCACATGGGACGGCAGCCTGAGGCCAGGAA...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGCCAGCCAGTGTGGGGTaGCCTGGGCAGAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQPASVG*PGQKLG
Trigger: CCCCAGTTTCTGCCCAGGGCACCCCACACTGGCTGG...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCGAAGTGACTGACCGTTaGTGGGTGAGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCEVTDR*WVSGAG
Trigger: CCCAGCCCCACTCACCCAGCAACGGTCAGTCACTTC...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCATCTGCAGATGGGGTaGGACCACCGCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTHLQMG*DHRWDR
Trigger: CCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATG...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGTCCACGAGGTGCCTCTaGTCCAGCTGGACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQSTRCL*SSWTPQ
Trigger: CTGCGGGGTCCAGCTGGACCAGAGGCACCTCGTGGA...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGCCTGGGAGACGCTGTTaGCGGTCACTCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQPGRRC*RSLAQG
Trigger: CCCCTGTGCGAGTGACCGCCAACAGCGTCTCCCAGG...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCAGGTGCACCTGGAAGTaGGCGGGGTTGGGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGRCTWK*AGLGSD
Trigger: GTCGCTTCCCAACCCCGCCCACTTCCAGGTGCACCT...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCGCCTGGAGTGTGCGTTaGCAGGCAGGGAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGAWSVR*QAGSCD
Trigger: GTCACAGCTCCCTGCCTGCCAACGCACACTCCAGGC...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCGGCCTCAGTGGCTGGTaGGCAAAGGGACATCCCAAG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCGLSGW*AKGHPK
Trigger: CTTGGGATGTCCCTTTGCCCACCAGCCACTGAGGCC...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCCTCCCACCTCTGTaGCTGTTGCGGTTCACCCCA +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADPLPPL*LLRFTP
Trigger: TGGGGTGAACCGCAACAGCCACAGAGGTGGGAGGGG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCCTGGGCATGTCCTGTaGGCAGCAGGCTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKPGHVL*AAGCPE
Trigger: TTCAGGGCAGCCTGCTGCCCACAGGACATGCCCAGG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGGCTGCCGTCCCATGTaGGTGGGTGCAGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRGCRPM*VGAAGE
Trigger: CTCTCCAGCTGCACCCACCCACATGGGACGGCAGCC...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGTCTGCGGGTACTGCCACGGCCCTGGGCATGTCCTGTGGGCAGCAGGCTGCCCCCAGCAATGTGTCCCTaGCACCTACTTGTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: GLRVLPRPWACPVGSRLPPAMCP*HLLVRE
Trigger: CTCACGAACAAGTAGGTGCCAGGGACACATTGCTGG...GGGCAGCCTGCTGCCCACAGGACATGCCCAGGGCCGTGGCAGTACCCGCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCAGCTACAGGAAGGGTaGGGTTGCACCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACQLQEG*GCTLHP
Trigger: GGGGTGCAGGGTGCAACCCCACCCTTCCTGTAGCTG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGAAGCTGAGACCCTCTaGAGGGGTCCGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCEAETL*RGPSGA
Trigger: CGCCCCACTCGGACCCCTCCAGAGGGTCTCAGCTTC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCGTTGCTGGGTGAGTaGGGCTGGGATCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADPLLGE*GWDLGK
Trigger: CTTCCCCAGATCCCAGCCCCACTCACCCAGCAACGG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGACTGCTGGGCACCCCTaGCTGGGACCTGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQTAGHP*LGPGCA
Trigger: GGCACATCCAGGTCCCAGCCAGGGGTGCCCAGCAGT...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCCAGGCTCCAGAGGGTaGCTCAGCGGGGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPPGSRG*LSGEAG
Trigger: TCCGGCTTCCCCGCTGAGCCACCCTCTGGAGCCTGG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCGACAGGCTGGGCATGTaGTCCTGCACAGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCDRLGM*SCTALR
Trigger: CCTGAGTGCTGTGCAGGACCACATGCCCAGCCTGTC...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGTGGAAGAGGGCAGCCTaGGCCCAGACTGCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQWKRAA*AQTAVG
Trigger: TCCCACCGCAGTCTGGGCCCAGGCTGCCCTCTTCCA...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCTGGACCCCGCAGAAATaGGGGATGGTCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTWTPQK*GMVLRV
Trigger: CACCCTGAGGACCATCCCTCATTTCTGCGGGGTCCA...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCGCAGAAGCCTGACCTaGCTCAGGGCCGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRRRSLT*LRAGWS
Trigger: AGACCATCCGGCCCTGAGTCAGGTCAGGCTTCTGCG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGTTTGGCGCAGAAGCCTaGCCTGACTCAGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKFGAEA*PDSGPD
Trigger: ATCCGGCCCTGAGTCAGGTCAGGCTTCTGCGCCAAA...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGGCTCAGCAGACAAGTaGAGGAGGAGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQGSADK*RRSPPW
Trigger: CCAGGGTGGGCTCCTCCTTCACTTGTCTGCTGAGCC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCACCAGAATCGCCTTaGGCCTCCGGTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRAPESP*ASGPPS
Trigger: ACTGGGTGGACCGGAGGCGCAAGGCGATTCTGGTGC...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGCATTCCAGAGACCCCTaGCTGGCCCACTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQHSRDP*LAHWCS
Trigger: GGAGCACCAGTGGGCCAGGCAGGGGTCTCTGGAATG...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCTGTGGGCAGCAGGCTaGCCTGAAATGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTLWAAG*PEMAVA
Trigger: AGCCACAGCCATTTCAGGGCAGCCTGCTGCCCACAG...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCTGTGGGCAGCAGGCTaGCCTGAAATGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKLWAAG*PEMAVA
Trigger: AGCCACAGCCATTTCAGGGCAGCCTGCTGCCCACAG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGTGCCCAGTCCTGGGGTaGCAGTGGCTGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQCPVLG*QWLWTA
Trigger: TGCTGTCCACAGCCACTGGCACCCCAGGACTGGGCA...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCGGTGGGAGTGCATCTaGAGATGGGGTGCGACCACC +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRRWECI*RWGATT
Trigger: GGTGGTCGCACCCCATCTGCAGATGCACTCCCACCG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACAGACTGCGGTGGGAGTaGATCTGCAGATGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADRLRWE*ICRWGA
Trigger: CGCACCCCATCTGCAGATGCACTCCCACCGCAGTCT...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACGCCCAAGAACGCGAGTaGTTGCCCAGCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADAQERE*LPSQHL
Trigger: CAGATGCTGGCTGGGCAAGCACTCGCGTTCTTGGGC...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCATGTTCCGGTTCCTGTaGCTCCTGCAGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCMFRFL*LLQAKP
Trigger: GGGCTTTGCCTGCAGGAGCCACAGGAACCGGAACAT...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGGACTGACCTGGACATaGACACGGGGCGTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSGLTWT*TRGVAG
Trigger: GCCGGCCACGCCCCGTGTCCATGTCCAGGTCAGTCC...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCCTCCAGGACTGACCTaGACATGGACACGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRPPGLT*TWTRGV
Trigger: CACGCCCCGTGTCCATGTCCAGGTCAGTCCTGGAGG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCACACTGCATGGCAGTaGAGGACGTCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKHTAWQ*RTSGPP
Trigger: TGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGGGTGTCCAGGCTCATaGCACAGGCCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQGCPGS*HRPPGP
Trigger: GGGGCCTGGAGGCCTGTGCCATGAGCCTGGACACCC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTTCAAAGGGGCAGATCTaGATCCGCACCGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACSKGQI*IRTASG
Trigger: CCCTGACGCGGTGCGGATCCAGATCTGCCCCTTTGA...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCTCAAAGGGGCAGATCTaGATCCGCACCGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTSKGQI*IRTASG
Trigger: CCCTGACGCGGTGCGGATCCAGATCTGCCCCTTTGA...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCAGGCAGAGCTGGGGCTaGGTGTCCACCAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPRQSWG*VSTSGY
Trigger: GTACCCGCTGGTGGACACCCAGCCCCAGCTCTGCCT...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCGGAAGTGGGCGGGGTTaGGAAGCGACGCTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTGSGRG*EATLFE
Trigger: TTCGAACAGCGTCGCTTCCCAACCCCGCCCACTTCC...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGGGAGCGGGCTGGCCTaGAGTGTGCGTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSGSGLA*SVRWQA
Trigger: TGCCTGCCAACGCACACTCCAGGCCAGCCCGCTCCC...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTACAGTGAGACCAGGGTaGGCGTGCGGGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSTVRPG*ACGRPS
Trigger: GCTGGGCCTCCCGCACGCCCACCCTGGTCTCACTGT...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTCCCCTCCCACCTCTGTaGCTGTTGCGGTTCACCCCA +
Preference number: 4 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAPLPPL*LLRFTP
Trigger: TGGGGTGAACCGCAACAGCCACAGAGGTGGGAGGGG...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCCCACTGGTGCTCCCTaGAAAGGGTCTCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQPTGAP*KGSPEA
Trigger: GGCCTCTGGAGACCCTTTCCAGGGAGCACCAGTGGG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCAGGGGTGGTACTGGCTaGGACACCACCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPRGGTG*DTTSQP
Trigger: GGGCTGGGAGGTGGTGTCCCAGCCAGTACCACCCCT...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGCCGTCCCATGTGGGTaGGTGCAGCTGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCAVPCG*VQLERD
Trigger: GTCTCTCTCCAGCTGCACCCACCCACATGGGACGGC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCCAGCTACAGGAAGGGTaGGGTTGCACCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCQLQEG*GCTLHP
Trigger: GGGGTGCAGGGTGCAACCCCACCCTTCCTGTAGCTG...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTCCGTTGCTGGGTGAGTaGGGCTGGGATCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAPLLGE*GWDLGK
Trigger: CTTCCCCAGATCCCAGCCCCACTCACCCAGCAACGG...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGAGTGCATCTGCAGATaGGGTGCGACCACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQECICR*GATTAG
Trigger: CCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGGATGGTCCTCAGGGTaGCATAGAGGTGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCGWSSG*HRGAGP
Trigger: TGGCCCAGCACCTCTATGTCACCCTGAGGACCATCC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGTGGACCCCGCAGAAATaGGGGATGGTCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQWTPQK*GMVLRV
Trigger: CACCCTGAGGACCATCCCTCATTTCTGCGGGGTCCA...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACTTGGAACCAGAGCTCTaGTCAGGGAAGGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADLEPEL*SGKVDP
Trigger: GGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAA...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCTGGCTGTGGCTCAGCTaGGCTGAGGAGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGWLWLS*AEETFQ
Trigger: CTGGAATGTCTCCTCAGCTCAGCTGAGCCACAGCCA...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCGGCCCCACAGTCAGGTaGGAACACCCCACACTCTCG +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPGPTVR*EHPTLS
Trigger: CGAGAGTGTGGGGTGTTCTCACCTGACTGTGGGGCC...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCACCACAGGAAGTGACTaGCCGTTGCTGGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RGSRRAYVTHTRSLQGPTTTGSD*PLLGEW
Trigger: CCACTCACCCAGCAACGGTCAGTCACTTCCTGTGGT...GGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGGCCGGAGAGCCTACGTaGCCCACACGAGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQAGEPT*PTREVF
Trigger: GAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGC...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTACCAGCTGGCTGGATTaGTGCAGCTTACGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: IAASVAGGKRRPSGPRPATSWLD*CSLRQP
Trigger: CGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGT...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCGGAGGTTGCAGAGCTaGTGGGGGACGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQRRLQS*WGTEKC
Trigger: ACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACAACGCCACGCCCAGCCTaGCGTGGGAGGCCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTTPRPA*RGRPRS
Trigger: AGACCTAGGCCTCCCACGGCAGGCTGGGCGTGGCGT...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCATTCCAGAGACCCCTaGCTGGCCCACTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPHSRDP*LAHWCS
Trigger: GGAGCACCAGTGGGCCAGGCAGGGGTCTCTGGAATG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCAAGGTCTGCGGGTACTaGCACGGCCCTGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPKVCGY*HGPGHV
Trigger: GACATGCCCAGGGCCGTGGCAGTACCCGCAGACCTT...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCAGCAGCCTTCCATCTaGAGGGAGGCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADQQPSI*REAQQT
Trigger: TGTCTGCTGAGCCTCCCTGCAGATGGAAGGCTGCTG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTTCCTGGCCTCAGGCTaGCGTCCCATGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPFLASG*RPMWVG
Trigger: ACCCACCCACATGGGACGGCAGCCTGAGGCCAGGAA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCAGCCCACCCAGCTCCTaGTGTTCCCAGGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPSPPSS*CSQGTQ
Trigger: CTGAGTCCCCTGGGAACAGCAGGAGCTGGGTGGGCT...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCGCTGGGACCTGGATGTaGCACTTGGAATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACAGTWM*HLECLR
Trigger: TCTCAGACATTCCAAGTGGCACATCCAGGTCCCAGC...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGAGATGGGCACCCACTGGAGCGGAGGTTGCAGAGCTGCTGGGGGACGGAGAAGCATGGACACGGGGCGTaGCCGGCAGAAGCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: RDGHPLERRLQSCWGTEKHGHGA*PAEAVK
Trigger: TTTAACAGCTTCTGCCGGCCACGCCCCGTGTCCATG...CTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCACACTGCATGGCAGTaGAGGACGTCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRHTAWQ*RTSGPP
Trigger: TGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGAGGGGACACACTGCATaGCAGTGGAGGACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQRGHTA*QWRTSG
Trigger: CCCTGACGTCCTCCACTGCCATGCAGTGTGTCCCCT...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCCTGCGATGCACCAGCTaGCTGGATTGCTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCLRCTS*LDCCSL
Trigger: TAAGCTGCAGCAATCCAGCCAGCTGGTGCATCGCAG...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGGCCTCAGTGGCTGGTaGGCAAAGGGACATCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRGLSGW*AKGHPK
Trigger: CTTGGGATGTCCCTTTGCCCACCAGCCACTGAGGCC...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTGTCCTGATGTACCCTaGGTCCTGGGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPCPDVP*VLGAWA
Trigger: GGCCCAGGCTCCCAGGACCCAGGGTACATCAGGACA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACACCAGAGACCCCTGCCTaGCCCACTGGTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTPETPA*PTGAPW
Trigger: CCAGGGAGCACCAGTGGGCCAGGCAGGGGTCTCTGG...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTAGGAGGAGCCCACCCTaGCCCCAAGAGGAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: IAASVAGGKRRPSGPRPARRSPP*PQEECV
Trigger: TACACACTCCTCTTGGGGCCAGGGTGGGCTCCTCCT...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCAGGAGGAGCCCACCCTaGCCCCAAGAGGAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCRRSPP*PQEECV
Trigger: TACACACTCCTCTTGGGGCCAGGGTGGGCTCCTCCT...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCAGTGTGGGGTGCCCTaGGCAGAAACTGGGGTGATC +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRQCGVP*AETGVI
Trigger: GATCACCCCAGTTTCTGCCCAGGGCACCCCACACTG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCTGGAGGGGTCCGAGTaGGGCGGGTGCCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKLEGSE*GGCPSE
Trigger: TTCACTGGGGCACCCGCCCCACTCGGACCCCTCCAG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACAGGGTGCGACCACCGCTaGGACAGGCTGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTGCDHR*DRLGMW
Trigger: CCACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCC...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGGGCGCTCATGCAGGGTaGTGGAGGCGCGTACACGCA +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKGAHAG*WRRVHA
Trigger: TGCGTGTACGCGCCTCCATCACCCTGCATGAGCGCC...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTCGCAGAAGCCTGACCTaGCTCAGGGCCGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSRRSLT*LRAGWS
Trigger: AGACCATCCGGCCCTGAGTCAGGTCAGGCTTCTGCG...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTTTGGAACCAGAGCTCTaGTCAGGGAAGGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: IAASVAGGKRRPSGPRPALEPEL*SGKVDP
Trigger: GGGGTCCACCTTCCCTGATCAGAGCTCTGGTTCCAA...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCGTGATCTGCTGGAGGTaGCCTTTGCTAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPVICWR*PLLGRG
Trigger: CCCCCTCCCTAGCAAAGGTCACCTCCAGCAGATCAC...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGGGCAGAAACTGGGGTaGTCCTTGACCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQGQKLG*SLTTSG
Trigger: GCCCGAGGTGGTCAAGGATCACCCCAGTTTCTGCCC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACGCCACTTGGAATGTCTaGGAACCGCACATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADATWNV*EPHIPA
Trigger: TGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGC...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTGCCACTTGGAATGTCTaGGAACCGCACATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACATWNV*EPHIPA
Trigger: TGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGC...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CCTGGGGCCGTGGACTTGCCCAGCATAGCATGGGCACTCCACAGTGGCAGGTGCTGGACCAATGTTTACTaGGTGGCGGGGACTTACTCG +
Preference number: 4 (lower is better)
Translates to: PGAVDLPSIAWALHSGRCWTNVY*VAGTYS
Trigger: CGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCA...GCACCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCCCGCTTCCACGAGGTaGCTCTGGTCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKPASTR*LWSSWT
Trigger: GGTCCAGCTGGACCAGAGGCACCTCGTGGAAGCGGG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCGGAGGTTGCAGAGCTaGTGGGGGACGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPRRLQS*WGTEKC
Trigger: ACACTTCTCCGTCCCCCAGCAGCTCTGCAACCTCCG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGCAGTCTCCTGTTCAGTaGACGCCACGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQQSPVQ*TPRPAC
Trigger: GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTG...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCACCCAGGCCACATGTaGTTAGTTCTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADHPGHM*LVLSTG
Trigger: CCCAGTGGACAGAACTAAGCACATGTGGCCTGGGTG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCACCCAGGCCACATGTaGTTAGTTCTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: WECICRWGATTAGTGWACHPGHM*LVLSTG
Trigger: CCCAGTGGACAGAACTAAGCACATGTGGCCTGGGTG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCACCTCTGTGGCTGTTaGGGTTCACCCCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPHLCGC*GSPHPK
Trigger: CTTCGGGTGGGGTGAACCGCAACAGCCACAGAGGTG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGTGCCTGGCCCACTGGTaGTCCCTGGAAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQCLAHW*SLERVS
Trigger: GGAGACCCTTTCCAGGGAGCACCAGTGGGCCAGGCA...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCAGCAGCCTTCCATCTaGAGGGAGGCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQQQPSI*REAQQT
Trigger: TGTCTGCTGAGCCTCCCTGCAGATGGAAGGCTGCTG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACATCCGAGTGGGGCGGGTaGCCCAGTGAAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTSEWGG*PSEAQH
Trigger: GTGCTGAGCTTCACTGGGGCACCCGCCCCACTCGGA...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGCACTGCACAGGCCACTaGTGGGCACCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGHCTGH*WAPLAG
Trigger: CCCAGCCAGGGGTGCCCAGCAGTGGCCTGTGCAGTG...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCAGACTGCGGTGGGAGTaGATCTGCAGATGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSVHWAESCPDVPWVLGARLRWE*ICRWGA
Trigger: CGCACCCCATCTGCAGATGCACTCCCACCGCAGTCT...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGAAGAACGCGAGTGCTTaGCCAGCCAGCATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRKNASA*PASIWL
Trigger: CAGCCAGATGCTGGCTGGGCAAGCACTCGCGTTCTT...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389983.6
CDS-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCCTGGGAGACGCTGTTaGCGGTCACTCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKPGRRC*RSLAQG
Trigger: CCCCTGTGCGAGTGACCGCCAACAGCGTCTCCCAGG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGAGGCAGAGCTGGGGCTaGGTGTCCACCAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKRQSWG*VSTSGY
Trigger: GTACCCGCTGGTGGACACCCAGCCCCAGCTCTGCCT...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGCACAGGCCTCCTCCCTaGGAAGGTCTAGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRHRPPP*EGLGRQ
Trigger: TTGCCTTCCTAGACCTTCCCAGGGAGGAGGCCTGTG...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCGAGATGGGCACCCACTaGAGCGGAGGTTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSVHWAESCPDVPWVLGAEMGTH*SGGCRA
Trigger: AGCTCTGCAACCTCCGCTCCAGTGGGTGCCCATCTC...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCCCCAGCGGTGTGTGGTaGAGGGAAATGCAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSVHWAESCPDVPWVLGAPSGVW*REMQGW
Trigger: CCAGCCTTGCATTTCCCTCCACCACACACCGCTGGG...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGACAGTGAGACCAGGGTaGGCGTGCGGGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRTVRPG*ACGRPS
Trigger: GCTGGGCCTCCCGCACGCCCACCCTGGTCTCACTGT...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGCTGGAGGGGTCCGAGTaGGGCGGGTGCCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRLEGSE*GGCPSE
Trigger: TTCACTGGGGCACCCGCCCCACTCGGACCCCTCCAG...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGGGGTGCGACCACCGCTaGGACAGGCTGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGGCDHR*DRLGMW
Trigger: CCACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCC...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
3UTR CAA 72 bp TTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTaGCTCACAGGGAGGGGTGCAGGTAGGAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRFTPPEARQAL*LTGRGAGRSAS
Trigger: GCTGGCACTCCTACCTGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGCCACCCACACGCTCTaGCACTGCGTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGATHTL*HCVSWV
Trigger: CACCCAGGAGACGCAGTGTCAGAGCGTGTGGGTGGC...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGGGTCCACCCAGTAGCTaGGCTTCCCCGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKGPPSS*ASPLPR
Trigger: TCGTGGAAGCGGGGAAGCTCAGCTACTGGGTGGACC...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTAGCCCCAGGGACACCTaGCCAGCAGGTGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGSPRDT*PAGGHC
Trigger: GCAATGGCCACCTGCTGGTCAGGTGTCCCTGGGGCT...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGGCACCTACTTGTTCGTaGGGAGATTCCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQAPTCS*GDSWPQ
Trigger: CTGAGGCCAGGAATCTCCTCACGAACAAGTAGGTGC...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTGCACAGCACTCAGGTaGGACGATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPCTALR*DDVQAP
Trigger: TGGAGCCTGGACATCGTCTCACCTGAGTGCTGTGCA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGTACTGCACTCTGCGATaGACCAGCTGGCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQYCTLR*TSWLDC
Trigger: GCAATCCAGCCAGCTGGTGCATCGCAGAGTGCAGTA...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGGCGGGTACTGCACTCTaGGATGCACCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKAGTAL*DAPAGW
Trigger: CCAGCCAGCTGGTGCATCGCAGAGTGCAGTACCCGC...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGCACTGGAGCGGAGGTTaGAGAGCTGCTGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRHWSGG*RAAGGR
Trigger: CCGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTG...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCTAGGCAAGCTCTTTTaGTCACAGGGAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQLGKLF*SQGGVQ
Trigger: CTGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTCACCTCTGTGGCTGTTaGGGTTCACCCCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSHLCGC*GSPHPK
Trigger: CTTCGGGTGGGGTGAACCGCAACAGCCACAGAGGTG...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGCCAGCCAGTGTGGGGTaGCCTGGGCAGAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGPASVG*PGQKLG
Trigger: CCCCAGTTTCTGCCCAGGGCACCCCACACTGGCTGG...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTCCGAGTGGGGCGGGTaGCCCAGTGAAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRSEWGG*PSEAQH
Trigger: GTGCTGAGCTTCACTGGGGCACCCGCCCCACTCGGA...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGAAGTGACTGACCGTTaGTGGGTGAGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQEVTDR*WVSGAG
Trigger: CCCAGCCCCACTCACCCAGCAACGGTCAGTCACTTC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGGACCCCATGGCCCACTaGACAGGCCACTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRDPMAH*TGHCWA
Trigger: TGCCCAGCAGTGGCCTGTGCAGTGGGCCATGGGGTC...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCATCTGCAGATGGGGTaGGACCACCGCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKHLQMG*DHRWDR
Trigger: CCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACACGGTGGGAGTGCATCTaGAGATGGGGTGCGACCACC +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTRWECI*RWGATT
Trigger: GGTGGTCGCACCCCATCTGCAGATGCACTCCCACCG...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGGCTCCCGGAGGCCCTaGGCACTTGCACCAGAATCG +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGGSRRP*ALAPES
Trigger: CGATTCTGGTGCAAGTGCCCAGGGCCTCCGGGAGCC...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGGAAGTGGGCGGGGTTaGGAAGCGACGCTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSGSGRG*EATLFE
Trigger: TTCGAACAGCGTCGCTTCCCAACCCCGCCCACTTCC...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGCCCTGCCTGGCCCACTaGTGCTCCCTGGAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRPCLAH*CSLERV
Trigger: GACCCTTTCCAGGGAGCACCAGTGGGCCAGGCAGGG...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTTGCCCAGCATAGCATaGGCACTCCACAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPLPSIA*ALHSGR
Trigger: CCTGCCACTGTGGAGTGCCCATGCTATGCTGGGCAA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGTGACTGACCGTTGCTaGGTGAGTGGGGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQVTDRC*VSGAGI
Trigger: GATCCCAGCCCCACTCACCCAGCAACGGTCAGTCAC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGACTGCTGGGCACCCCTaGCTGGGACCTGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGTAGHP*LGPGCA
Trigger: GGCACATCCAGGTCCCAGCCAGGGGTGCCCAGCAGT...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTCAAGGGCCGACCCCATaGCCCACTGCACAGGCCACT +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGQGPTP*PTAQAT
Trigger: AGTGGCCTGTGCAGTGGGCCATGGGGTCGGCCCTTG...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGGTCCACCCAGTAGCTaGGCTTCCCCGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGGPPSS*ASPLPR
Trigger: TCGTGGAAGCGGGGAAGCTCAGCTACTGGGTGGACC...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACATTTGGCGCAGAAGCCTaGCCTGACTCAGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTFGAEA*PDSGPD
Trigger: ATCCGGCCCTGAGTCAGGTCAGGCTTCTGCGCCAAA...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTTGGCTGTGGCTCAGCTaGGCTGAGGAGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSWLWLS*AEETFQ
Trigger: CTGGAATGTCTCCTCAGCTCAGCTGAGCCACAGCCA...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGGGCCCCACAGTCAGGTaGGAACACCCCACACTCTCG +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRGPTVR*EHPTLS
Trigger: CGAGAGTGTGGGGTGTTCTCACCTGACTGTGGGGCC...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTTGCACAGCACTCAGGTaGGACGATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSCTALR*DDVQAP
Trigger: TGGAGCCTGGACATCGTCTCACCTGAGTGCTGTGCA...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGCAAAGCAGCCAAAGTaGACTTGGAGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQAKQPK*TWSCCP
Trigger: GGGGCAGCAGCTCCAAGTGCACTTTGGCTGCTTTGC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCACAGCACCTCCAGTaGCTCAGTGTCGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADPQHLQ*LSVVFK
Trigger: TTTGAAAACGACACTGAGGCACTGGAGGTGCTGTGG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGAGCCCTGGATGCAGATaGCTGGGGCACAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGSPGCR*LGHRPP
Trigger: AGGAGGCCTGTGCCCCAGGCATCTGCATCCAGGGCT...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTAGCCCTGGATGCAGATaGCTGGGGCACAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGSPGCR*LGHRPP
Trigger: AGGAGGCCTGTGCCCCAGGCATCTGCATCCAGGGCT...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTTGCCCAGTCCTGGGGTaGCAGTGGCTGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGCPVLG*QWLWTA
Trigger: TGCTGTCCACAGCCACTGGCACCCCAGGACTGGGCA...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTCATGGACACGGGGCGTaGCCGGCAGAAGCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSHGHGA*PAEAVK
Trigger: TTTAACAGCTTCTGCCGGCCACGCCCCGTGTCCATG...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGAGGTGCACCTGGAAGTaGGCGGGGTTGGGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGRCTWK*AGLGSD
Trigger: GTCGCTTCCCAACCCCGCCCACTTCCAGGTGCACCT...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGCCTGGAGTGTGCGTTaGCAGGCAGGGAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGAWSVR*QAGSCD
Trigger: GTCACAGCTCCCTGCCTGCCAACGCACACTCCAGGC...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCAAGTCACTGGCGGTTaGAACCAGAGCTCTGATCAG +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQQVTGG*NQSSDQ
Trigger: CTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCTTAGTTCTGTCCACTaGGCAGAGTCCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AGKPESLRDPHEKSSRADLSSVH*AESCPD
Trigger: ATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAG...GTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGAGCTCTGACCCTTCCTaGACTCCAAGGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQSSDPS*TPRQSH
Trigger: GTGGCTCTGCCTTGGAGTCCAGGAAGGGTCAGAGCT...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGGAGTGCATCTGCAGATaGGGTGCGACCACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGECICR*GATTAG
Trigger: CCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTC...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCCCCTCTCCAGTCTATaGGACATAGCAGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQPLSSL*DIAASV
Trigger: AACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGCCGGAGAGCCTACGTaGCCCACACGAGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGAGEPT*PTREVF
Trigger: GAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGC...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACAGCAAAGCAGCCAAAGTaGACTTGGAGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTAKQPK*TWSCCP
Trigger: GGGGCAGCAGCTCCAAGTGCACTTTGGCTGCTTTGC...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTCTGCGATGCACCAGCTaGCTGGATTGCTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSLRCTS*LDCCSL
Trigger: TAAGCTGCAGCAATCCAGCCAGCTGGTGCATCGCAG...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGAGGCCCAGCGGTGTGTaGTGGAGGGAAATGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGRPSGV*WREMQG
Trigger: GCCTTGCATTTCCCTCCACCACACACCGCTGGGCCT...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTAGGCCCAGCGGTGTGTaGTGGAGGGAAATGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGRPSGV*WREMQG
Trigger: GCCTTGCATTTCCCTCCACCACACACCGCTGGGCCT...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp TGGCTGGTGGGCAAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGACATCCCAAGTCACTaGCGGTTGGAACCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WLVGKGTSQVTGGWNQSSDIPSH*RLEPEL
Trigger: GAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTC...AGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTTGCCCACCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACAAGCTCTGACCCTTCCTaGACTCCAAGGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTSSDPS*TPRQSH
Trigger: GTGGCTCTGCCTTGGAGTCCAGGAAGGGTCAGAGCT...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGGTGACTGACCGTTGCTaGGTGAGTGGGGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRVTDRC*VSGAGI
Trigger: GATCCCAGCCCCACTCACCCAGCAACGGTCAGTCAC...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGTGTGACTTCCTCCTGTaGCACAGGTGCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKCDFLL*HRCTWK
Trigger: CTTCCAGGTGCACCTGTGTCACAGGAGGAAGTCACA...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACATGTGACTTCCTCCTGTaGCACAGGTGCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTCDFLL*HRCTWK
Trigger: CTTCCAGGTGCACCTGTGTCACAGGAGGAAGTCACA...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACAGCACCTACTTGTTCGTaGGGAGATTCCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTAPTCS*GDSWPQ
Trigger: CTGAGGCCAGGAATCTCCTCACGAACAAGTAGGTGC...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCCACAGCACCTCCAGTaGCTCAGTGTCGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPPQHLQ*LSVVFK
Trigger: TTTGAAAACGACACTGAGGCACTGGAGGTGCTGTGG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGTACTGCACTCTGCGATaGACCAGCTGGCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKYCTLR*TSWLDC
Trigger: GCAATCCAGCCAGCTGGTGCATCGCAGAGTGCAGTA...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGGGACTTACTCGCTCTaGAGCCCCCTCTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGGTYSL*SPLSSL
Trigger: TAGACTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCC...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGCACAGGCCTCCTCCCTaGGAAGGTCTAGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRHRPPP*EGLGRQ
Trigger: TTGCCTTCCTAGACCTTCCCAGGGAGGAGGCCTGTG...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCCTTAGTTCTGTCCACTaGGCAGAGTCCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSVHWAESCPDVPWVLGALSSVH*AESCPD
Trigger: ATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAG...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTCTAGGCAAGCTCTTTTaGTCACAGGGAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KGHPKSLAVGTRALIREGLGKLF*SQGGVQ
Trigger: CTGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAG...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR GCA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGGCTGGGACCTGGATGTaGCACTTGGAATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKAGTWM*HLECLR
Trigger: TCTCAGACATTCCAAGTGGCACATCCAGGTCCCAGC...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACACCCCTCTCCAGTCTATaGGACATAGCAGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTPLSSL*DIAASV
Trigger: AACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGG...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTGGACCAATGTTTACTaGGTGGCGGGGACTTACTCG +
Preference number: 4 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRWTNVY*VAGTYS
Trigger: CGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCA...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR TCA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGTATATTCTGTGTAACTaGGAACAGGAGAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQYILCN*EQERPH
Trigger: ATGTGGCCTCTCCTGTTCTCAGTTACACAGAATATA...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389983.6
CDS-3UTR CCA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGCAAGTCACTGGCGGTTaGAACCAGAGCTCTGATCAG +
Preference number: 4 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGQVTGG*NQSSDQ
Trigger: CTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTG...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CCA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACACCAATGTTTACTGAGTaGCGGGGACTTACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LWLLRFTPPEARQALLLTPMFTE*RGLTRS
Trigger: AGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGG...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCGGAGGCCCTGGGCACTaGCACCAGAATCGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACGGPGH*HQNRLA
Trigger: CGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTCC...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS GCA 90 bp GCGCGTACACGCAGGAGCATCGCGCAGCCGTCAGAGGGGACACACTaGATGGCAGTGGAGGACGTCAGGGCCTCCAGGACTGACCTGGAC +
Preference number: 5 (lower is better)
Translates to: ARTRRSIAQPSEGTH*MAVEDVRASRTDLD
Trigger: GTCCAGGTCAGTCCTGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTGTCCCCTCTGACGGCTGCGCGATGCTCCTGCGTGTACGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS TCA 90 bp AGGGAGCGGGCTGGCCTGGAGTGTGCGTTGGCAGGCAGGGAGCTGTaGCTTCCTCCTGTGACACAGGTGCACCTGGAAGTGGGCGGGGTT +
Preference number: 5 (lower is better)
Translates to: RERAGLECALAGREL*LPPVTQVHLEVGGV
Trigger: AACCCCGCCCACTTCCAGGTGCACCTGTGTCACAGGAGGAAGTCACAGCTCCCTGCCTGCCAACGCACACTCCAGGCCAGCCCGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 90 bp GCAGGAGCATCGCGCAGCCGTCAGAGGGGACACACTGCATGGCAGTaGAGGACGTCAGGGCCTCCAGGACTGACCTGGACATGGACACGG +
Preference number: 5 (lower is better)
Translates to: AGASRSRQRGHTAWQ*RTSGPPGLTWTWTR
Trigger: CCGTGTCCATGTCCAGGTCAGTCCTGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTGTCCCCTCTGACGGCTGCGCGATGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGGCCTGGGAGACGCTGTaGGCGGTCACTCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQAWETL*AVTRTG
Trigger: CCCTGTGCGAGTGACCGCCAACAGCGTCTCCCAGGC...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGCCACTGGAGCGGAGGTaGCAGAGCTGCTGGGGGACG +
Preference number: 5 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQPLERR*QSCWGT
Trigger: CGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGG...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCCAAGAACGCGAGTGCTaGCCCAGCCAGCATCTGGCT +
Preference number: 5 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACQEREC*PSQHLA
Trigger: AGCCAGATGCTGGCTGGGCAAGCACTCGCGTTCTTG...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389983.6
CDS CCA 90 bp GTACACGCAGGAGCATCGCGCAGCCGTCAGAGGGGACACACTGCATaGCAGTGGAGGACGTCAGGGCCTCCAGGACTGACCTGGACATGG +
Preference number: 5 (lower is better)
Translates to: VHAGASRSRQRGHTA*QWRTSGPPGLTWTW
Trigger: CCATGTCCAGGTCAGTCCTGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTGTCCCCTCTGACGGCTGCGCGATGCTCCTGCGTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTGGAGGCCCTGGGCACTaGCACCAGAATCGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAGGPGH*HQNRLA
Trigger: CGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTCC...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCACAGGCCACCAGCTGGCTGGATaGCTGCAGCTTACGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RDPHEKSSRADPMAHCTGHQLAG*LQLTAA
Trigger: GGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGTG...GCCTGTGCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CTCCCCGTTTCCCCCACCCAGTCTCCTGTTCAGTGCACGCCACGCCCAGCCTGCGAGGGGGACCTAGGCTaGGCCAAAAAGTCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LPVSPTQSPVQCTPRPACEGDLG*AKKSCW
Trigger: CCAGCAAGACTTTTTGGCCAAGCCTAGGTCCCCCTC...GCAGGCTGGGCGTGGCGTGCACTGAACAGGAGACTGGGTGGGGGAAACGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp ATAGCAGCCTCTGTTGCAGGAGGGAAAAGAAGGCCCAGCGGCCCACGGCCAGCTGCAGCTGCCAGGGCCTaGTCTTCAGGGCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: IAASVAGGKRRPSGPRPAAAARA*SSGPGT
Trigger: TGTCCCTGGCCCTGAAGACAAGGCCCTGGCAGCTGC...AGCTGGCCGTGGGCCGCTGGGCCTTCTTTTCCCTCCTGCAACAGAGGCTGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTGCACCAGAATCGCCTaGCGCCTCCGGTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPCTRIA*RLRSTQ
Trigger: CTGGGTGGACCGGAGGCGCAAGGCGATTCTGGTGCA...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp GGCTCAGCGGGGAAGCCGGAGAGCCTACGTGACCCACACGAGAAGTCTTCAAGGTGGAAGTGGGCGGGGTaGGGAAGCGACGCTGTTCGA +
Preference number: 5 (lower is better)
Translates to: GSAGKPESLRDPHEKSSRWKWAG*GSDAVR
Trigger: TCGAACAGCGTCGCTTCCCAACCCCGCCCACTTCCA...CCTTGAAGACTTCTCGTGTGGGTCACGTAGGCTCTCCGGCTTCCCCGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp GTGCCACTTGGAATGTCTGAGAACCGCACATCCCAGCAGGTGGCCCCCAGGCAGCCACCTCTGTGGCTGTaGCGGTTCACCCCACCCGAA +
Preference number: 5 (lower is better)
Translates to: VPLGMSENRTSQQVAPRQPPLWL*RFTPPE
Trigger: TTCGGGTGGGGTGAACCGCAACAGCCACAGAGGTGG...CTGCCTGGGGGCCACCTGCTGGGATGTGCGGTTCTCAGACATTCCAAGTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCGCAGCTGCCAGGGCCTaGTCTTCAGGGCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: SSVHWAESCPDVPWVLGAAAARA*SSGPGT
Trigger: TGTCCCTGGCCCTGAAGACAAGGCCCTGGCAGCTGC...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGTGCACCAGAATCGCCTaGCGCCTCCGGTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQCTRIA*RLRSTQ
Trigger: CTGGGTGGACCGGAGGCGCAAGGCGATTCTGGTGCA...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCCACCAGCTGGCTGGATaGCTGCAGCTTACGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPHQLAG*LQLTAA
Trigger: GGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGTG...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTGCTAGGCAAGCTCTTTaGCTCACAGGGAGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: WECICRWGATTAGTGWACARQAL*LTGRGA
Trigger: TGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAGC...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGTGGAAGTGGGCGGGGTaGGGAAGCGACGCTGTTCGA +
Preference number: 5 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQWKWAG*GSDAVR
Trigger: TCGAACAGCGTCGCTTCCCAACCCCGCCCACTTCCA...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGCCACTGGAGCGGAGGTaGCAGAGCTGCTGGGGGACG +
Preference number: 5 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRPLERR*QSCWGT
Trigger: CGTCCCCCAGCAGCTCTGCAACCTCCGCTCCAGTGG...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTCTTGGCCAAAAAGTCTaGCTGGGAGAAGGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: WECICRWGATTAGTGWACLGQKV*LGEGGA
Trigger: AGCTCCCCCTTCTCCCAGCAAGACTTTTTGGCCAAG...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CAGCCCCCTCTCCAGTCTATGGGACATAGCAGCCTCTGTTGCAGGAGGGAAAAGCCTGGGGCCGTGGACTaGCCCAGCATAGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: QPPLQSMGHSSLCCRREKPGAVD*PSIAWA
Trigger: TGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG...CTTTTCCCTCCTGCAACAGAGGCTGCTATGTCCCATAGACTGGAGAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp TGGGAGTGCATCTGCAGATGGGGTGCGACCACCGCTGGGACAGGCTGGGCATGTGTCCCTGGCACCTACTaGTTCGTGAGGAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: WECICRWGATTAGTGWACVPGTY*FVRRFL
Trigger: CAGGAATCTCCTCACGAACAAGTAGGTGCCAGGGAC...ACATGCCCAGCCTGTCCCAGCGGTGGTCGCACCCCATCTGCAGATGCACTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AGCCTACGTGACCCACACGAGAAGTCTTCAAGGGCCGACCCCATGGCCCACTGCGGCCATGACCATGAATaGTCTGAGAGGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SLRDPHEKSSRADPMAHCGHDHE*SEREAG
Trigger: CCCAGCCTCCCTCTCAGACAATTCATGGTCATGGCC...GCAGTGGGCCATGGGGTCGGCCCTTGAAGACTTCTCGTGTGGGTCACGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS TCA 90 bp TCTGGTCCAGCTGGACCCCGCAGAAATGAGGGATGGTCCTCAGGGTaGCATAGAGGTGCTGGGCCACGCTCACCGCAAAGCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: SGPAGPRRNEGWSSG*HRGAGPRSPQSSQS
Trigger: ACTTTGGCTGCTTTGCGGTGAGCGTGGCCCAGCACCTCTATGTCACCCTGAGGACCATCCCTCATTTCTGCGGGGTCCAGCTGGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGCCTGGGGCCGTGGACTaGCCCAGCATAGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRPGAVD*PSIAWA
Trigger: TGCCCATGCTATGCTGGGCAAGTCCACGGCCCCAGG...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp GACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCTCTCCAGGCTAGGCAAGCTCTTTaGCTCACAGGGAGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: DQCLLSGGDLLALQPPLQARQAL*LTGRGA
Trigger: TGCACCCCTCCCTGTGAGCAAAAGAGCTTGCCTAGC...CTGGAGAGGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGTCCACCTCTGTGGCTGTaGCGGTTCACCCCACCCGAA +
Preference number: 5 (lower is better)
Translates to: KGHPKSLAVGTRALIREGPPLWL*RFTPPE
Trigger: TTCGGGTGGGGTGAACCGCAACAGCCACAGAGGTGG...ACCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp ACCCCTGGACCAATGTTTACTGAGTGGCGGGGACTTACTCGCTCTGCAGCCCCCGTCCCTGGCACCTACTaGTTCGTGAGGAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: TPGPMFTEWRGLTRSAAPVPGTY*FVRRFL
Trigger: CAGGAATCTCCTCACGAACAAGTAGGTGCCAGGGAC...GGGGGCTGCAGAGCGAGTAAGTCCCCGCCACTCAGTAAACATTGGTCCAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CAGAGCTGCTGGGGGACGGAGAAGTGTACATCGGTCCTCCAGCCCTGGATGCAGACCTGGATGTGCCACTaGGAATGTCTGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: QSCWGTEKCTSVLQPWMQTWMCH*ECLRTA
Trigger: TGCGGTTCTCAGACATTCCAAGTGGCACATCCAGGT...CTGCATCCAGGGCTGGAGGACCGATGTACACTTCTCCGTCCCCCAGCAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CTGTGGCTGTTGCGGTTCACCCCACCCGAAGCTAGGCAAGCTCTTTTGCTCACAGAGGGGGACCTAGGCTaGGCCAAAAAGTCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LWLLRFTPPEARQALLLTEGDLG*AKKSCW
Trigger: CCAGCAAGACTTTTTGGCCAAGCCTAGGTCCCCCTC...TGTGAGCAAAAGAGCTTGCCTAGCTTCGGGTGGGGTGAACCGCAACAGCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGTCCTGGGAGCCACCTGGATGTGCCACTaGGAATGTCTGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: SSVHWAESCPDVPWVLGATWMCH*ECLRTA
Trigger: TGCGGTTCTCAGACATTCCAAGTGGCACATCCAGGT...GGCTCCCAGGACCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp AAAGGGACATCCCAAGTCACTGGCGGTTGGAACCAGAGCTCTGATCAGGGAAGGGGCCATGACCATGAATaGTCTGAGAGGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KGTSQVTGGWNQSSDQGRGHDHE*SEREAG
Trigger: CCCAGCCTCCCTCTCAGACAATTCATGGTCATGGCC...CCTTCCCTGATCAGAGCTCTGGTTCCAACCGCCAGTGACTTGGGATGTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS-3UTR CAA 90 bp CACATGTGCTTAGTTCTGTCCACTGGGCAGAGTCCTGTCCTGATGTACCCTGGGCTTGGCCAAAAAGTCTaGCTGGGAGAAGGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: HMCLVLSTGQSPVLMYPGLGQKV*LGEGGA
Trigger: AGCTCCCCCTTCTCCCAGCAAGACTTTTTGGCCAAG...CCCAGGGTACATCAGGACAGGACTCTGCCCAGTGGACAGAACTAAGCACATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS TCA 90 bp AACGATCCGAAACCTGGGAAATCAGCAACTTATATTCTGTGTAACTaGGAACAGGAGAGGCCACATTCTGTAATCCGGGGGATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NDPKPGKSATYILCN*EQERPHSVIRGMAR
Trigger: CCTGGCCATCCCCCGGATTACAGAATGTGGCCTCTCCTGTTCTCAGTTACACAGAATATAAGTTGCTGATTTCCCAGGTTTCGGATCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389983.6
CDS GCA 72 bp TACTGCACTCTGCGATGCACCAGCTGGCTGGATTGCTaGAGCTTACGGCAGCCGGCCCCCGGCCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: YCTLRCTSWLDC*SLRQPAPGPGR
Trigger: GCGCCCGGGGCCGGGGGCCGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGTGCATCGCAGAGTGCAGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CAA 72 bp CGGGTACTGCACTCTGCGATGCACCAGCTGGCTGGATaGCTGCAGCTTACGGCAGCCGGCCCCCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RVLHSAMHQLAG*LQLTAAGPRPR
Trigger: CCGGGGCCGGGGGCCGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGTGCATCGCAGAGTGCAGTACCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp CCAGCGGGTACTGCACTCTGCGATGCACCAGCTGGCTaGATTGCTGCAGCTTACGGCAGCCGGCCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PAGTALCDAPAG*IAAAYGSRPPA
Trigger: GGCCGGGGGCCGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGTGCATCGCAGAGTGCAGTACCCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp CGGCTGCCAGGTCACCTGAGGCTGAAGGGAGCGGGCTaGCCTGGAGTGTGCGTTGGCAGGCAGGGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RLPGHLRLKGAG*PGVCVGRQGAV
Trigger: CACAGCTCCCTGCCTGCCAACGCACACTCCAGGCCAGCCCGCTCCCTTCAGCCTCAGGTGACCTGGCAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CAA 90 bp GCAGAGCCGCAGGTAGTAGTCGGGGCTCCCGGAGGCCCTGGGCACTaGCACCAGAATCGCCTTGCGCCTCCGGTCCACCCAGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: AEPQVVVGAPGGPGH*HQNRLAPPVHPVAE
Trigger: CTCAGCTACTGGGTGGACCGGAGGCGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTCCGGGAGCCCCGACTACTACCTGCGGCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp AGAGCCGCAGGTAGTAGTCGGGGCTCCCGGAGGCCCTaGGCACTTGCACCAGAATCGCCTTGCGCCTCCGGT +
Preference number: 6 (lower is better)
Translates to: RAAGSSRGSRRP*ALAPESPCASG
Trigger: ACCGGAGGCGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTCCGGGAGCCCCGACTACTACCTGCGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CAA 72 bp CAGGTAGTAGTCGGGGCTCCCGGAGGCCCTGGGCACTaGCACCAGAATCGCCTTGCGCCTCCGGTCCACCCA +
Preference number: 6 (lower is better)
Translates to: QVVVGAPGGPGH*HQNRLAPPVHP
Trigger: TGGGTGGACCGGAGGCGCAAGGCGATTCTGGTGCAAGTGCCCAGGGCCTCCGGGAGCCCCGACTACTACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp GGAGCATCGCGCAGCCGTCAGAGGGGACACACTGCATaGCAGTGGAGGACGTCAGGGCCTCCAGGACTGACC +
Preference number: 6 (lower is better)
Translates to: GASRSRQRGHTA*QWRTSGPPGLT
Trigger: GGTCAGTCCTGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTGTCCCCTCTGACGGCTGCGCGATGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp TCCACCAGCGGGTACTGCACTCTGCGATGCACCAGCTaGCTGGATTGCTGCAGCTTACGGCAGCCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: STSGYCTLRCTS*LDCCSLRQPAP
Trigger: GGGGGCCGGCTGCCGTAAGCTGCAGCAATCCAGCCAGCTGGTGCATCGCAGAGTGCAGTACCCGCTGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS TCA 72 bp CCAGAATCGCCTTGCGCCTCCGGTCCACCCAGTAGCTaGGCTTCCCCGCTTCCACGAGGTGCCTCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: PESPCASGPPSS*ASPLPRGASGP
Trigger: TGGACCAGAGGCACCTCGTGGAAGCGGGGAAGCTCAGCTACTGGGTGGACCGGAGGCGCAAGGCGATTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp TCGCGCAGCCGTCAGAGGGGACACACTGCATGGCAGTaGAGGACGTCAGGGCCTCCAGGACTGACCTGGACA +
Preference number: 6 (lower is better)
Translates to: SRSRQRGHTAWQ*RTSGPPGLTWT
Trigger: TGTCCAGGTCAGTCCTGGAGGCCCTGACGTCCTCCACTGCCATGCAGTGTGTCCCCTCTGACGGCTGCGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS TCA 72 bp GCTGGACCCCGCAGAAATGAGGGATGGTCCTCAGGGTaGCATAGAGGTGCTGGGCCACGCTCACCGCAAAGC +
Preference number: 6 (lower is better)
Translates to: AGPRRNEGWSSG*HRGAGPRSPQS
Trigger: GCTTTGCGGTGAGCGTGGCCCAGCACCTCTATGTCACCCTGAGGACCATCCCTCATTTCTGCGGGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS CCA 72 bp CCCCAACTGGTAGAGAACTTCAGGCAGAGCTGGGGCTaGGTGTCCACCAGCGGGTACTGCACTCTGCGATGC +
Preference number: 6 (lower is better)
Translates to: PQLVENFRQSWG*VSTSGYCTLRC
Trigger: GCATCGCAGAGTGCAGTACCCGCTGGTGGACACCCAGCCCCAGCTCTGCCTGAAGTTCTCTACCAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341280.5
ENST00000389983.6
CDS TCA 72 bp AAACCTGGGAAATCAGCAACTTATATTCTGTGTAACTaGGAACAGGAGAGGCCACATTCTGTAATCCGGGGG +
Preference number: 6 (lower is better)
Translates to: KPGKSATYILCN*EQERPHSVIRG
Trigger: CCCCCGGATTACAGAATGTGGCCTCTCCTGTTCTCAGTTACACAGAATATAAGTTGCTGATTTCCCAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389983.6