RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL17RC (Homo sapiens)

Ensembl gene IDs: ENSG00000163702

Ensembl transcript IDs: ENST00000295981.7, ENST00000383812.9, ENST00000403601.8, ENST00000412901.5, ENST00000413608.2, ENST00000416074.6, ENST00000424206.5, ENST00000434756.5, ENST00000436503.5, ENST00000438091.5, ENST00000440502.5, ENST00000451165.6, ENST00000451231.5, ENST00000451271.5, ENST00000455057.5, ENST00000464406.5, ENST00000466046.5, ENST00000466712.1, ENST00000469686.5, ENST00000476810.5, ENST00000478206.1, ENST00000481032.1, ENST00000483582.5, ENST00000490512.5, ENST00000494365.5, ENST00000497102.5, ENST00000497387.5, ENST00000498214.6

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGCCCCCGA +
Preference number: 1 (lower is better)
Translates to: RRQGAHQALETRVIG*VEEQSRAAPGGRPR
Trigger: TCGGGGGCGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR TCA 90 bp CGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGCTTTCGC +
Preference number: 1 (lower is better)
Translates to: RRQGAHQALETRVIG*VEEQSRAAPGGRFR
Trigger: GCGAAAGCGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR GCA 90 bp GGCCGTGCGCCCCGGGCCCGGACACCCCATCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGC +
Preference number: 1 (lower is better)
Translates to: GRAPRARTPHPVATR*TAPPHRERRARPPR
Trigger: GCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCGGGGCGCACGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 90 bp AGTTCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTaGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCC +
Preference number: 1 (lower is better)
Translates to: SSRRLHRSTATRSGS*HRADARAPTRRSKP
Trigger: GGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGAACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR TCA 90 bp AAGACCACCACGCCGCCCTCCTGCAGGGTCTGGCGCCGCTGCGCGTaGAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTC +
Preference number: 1 (lower is better)
Translates to: KTTTPPSCRVWRRCA*NQATGPCALSSRRL
Trigger: GAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAGCGGCGCCAGACCCTGCAGGAGGGCGGCGTGGTGGTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 90 bp CGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTaGGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGC +
Preference number: 1 (lower is better)
Translates to: RSPPAQCRFCGQRAR*VQQPALQGQQLQSG
Trigger: GCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 90 bp TGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTaGTGCAGGGCCCCCAGGAAGTCTGGCAGTTGGGAGGGCAGTGTG +
Preference number: 1 (lower is better)
Translates to: CSALSWSRPERGARG*CRAPRKSGSWEGSV
Trigger: CACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 90 bp TCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTaGAGGGCCCCCAGGAAGTCTGGCAGTTGGGAGGGCAGTGTGAAG +
Preference number: 1 (lower is better)
Translates to: SALSWSRPERGARGC*RAPRKSGSWEGSVK
Trigger: CTTCACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 90 bp AGCGAGCACGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTaGAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCC +
Preference number: 1 (lower is better)
Translates to: SEHGASSSQLCRVSS*SRAACQRFWCARGS
Trigger: GGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCGTGCTCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 90 bp GTTCACGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGC +
Preference number: 1 (lower is better)
Translates to: VHVHSDVLPGKRWDQ*LAGVPTRSPPAQCR
Trigger: GCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 90 bp TCCCGGCGCGGGAGTCCCCGGGGGATGGAAGTAGCTATCCAGGGCTaGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCG +
Preference number: 1 (lower is better)
Translates to: SRRGSPRGMEVAIQG*LKGPGHLLRSLLEP
Trigger: CGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTACTTCCATCCCCCGGGGACTCCCGCGCCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 90 bp TCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAG +
Preference number: 1 (lower is better)
Translates to: SSSQLCRVSSCSRAA*QRFWCARGSSLKGQ
Trigger: CTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 90 bp AACCTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGC +
Preference number: 1 (lower is better)
Translates to: NLVHSDVLPGKRWDQ*LAGVPTRSPPAQCR
Trigger: GCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR CCA 90 bp ACGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCT +
Preference number: 1 (lower is better)
Translates to: TSTVTFSQESGGTSG*QGSPPGARQHSAAS
Trigger: AGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 90 bp TTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCT +
Preference number: 1 (lower is better)
Translates to: LSTVTFSQESGGTSG*QGSPPGARQHSAAS
Trigger: AGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR CCA 90 bp AAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCTGTCTGCAGGTGCGTAGGCGCCAGC +
Preference number: 1 (lower is better)
Translates to: KWTATRRQRSQSVSF*HLSTSSVCRCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476810.5
3UTR CCA 90 bp GAGCTGCCCTCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGGATCTGTTGTCCTGGGGGCCTCGTG +
Preference number: 1 (lower is better)
Translates to: ELPSWRLCWVVKYSH*VPRHRGICCPGGLV
Trigger: CACGAGGCCCCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR GCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTCACGTCCACAGTGACGTTCTCCCAG +
Preference number: 1 (lower is better)
Translates to: SLRGPRESAHKHSCS*SFSELFTSTVTFSQ
Trigger: CTGGGAGAACGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 90 bp GAAGTACAGCCACTGGGTTCCAAGGCACAGAGGGATCTGTTGTCCTaGGGGCCTCGTGTCTCCAACAGTAGCACATCGTCTTTGAGAGGC +
Preference number: 1 (lower is better)
Translates to: EVQPLGSKAQRDLLS*GPRVSNSSTSSLRG
Trigger: GCCTCTCAAAGACGATGTGCTACTGTTGGAGACACGAGGCCCCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR GCA 90 bp TTGCTTGGGGTGAGTCCTCTTCAAGGATCCTCTCTGATATGGCACTaGGTCCTTTGCACAGGCATCGGCCTACAGTGGGAATGGACTTGG +
Preference number: 1 (lower is better)
Translates to: LLGVSPLQGSSLIWH*VLCTGIGLQWEWTW
Trigger: CCAAGTCCATTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAGAGGACTCACCCCAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR CCA 90 bp TTTCCCTTGCTTGGGGTGAGTCCTCTTCAAGGATCCTCTCTGATATaGCACTGCGTCCTTTGCACAGGCATCGGCCTACAGTGGGAATGG +
Preference number: 1 (lower is better)
Translates to: FPLLGVSPLQGSSLI*HCVLCTGIGLQWEW
Trigger: CCATTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAGAGGACTCACCCCAAGCAAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR GCA 90 bp CGGAAGGCGTCGTGCGGGCCGTGCGCCCCGGGCCCGGACACCCCATCCTGTAGCCCGGGCGCCCGGCCCTaGAAGAAGTCGGGCAGCACG +
Preference number: 2 (lower is better)
Translates to: RKASCGPCAPGPDTPSCSPGARP*KKSGST
Trigger: CGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGG...GCTACAGGATGGGGTGTCCGGGCCCGGGGCGCACGGCCCGCACGACGCCTTCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp CCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTCGGGCAGCACGCAGCTGAGCCGCGCGGCCCCTaGCGGCCGCTTTCGCGTGAT +
Preference number: 2 (lower is better)
Translates to: PHVAAGRPALQEVGQHAAEPRGP*RPLSRD
Trigger: ATCACGCGAAAGCGGCCGCCAGGGGCCGCGCGGCTC...AGCTGCGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CAA 90 bp ATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTaGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: IQGWLKGPGHLLRSL*EPPGTRGARLLQGP
Trigger: GGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp TCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGCCCCCAGCATCTGCTGACACGTTaGGCCAGGGCAGGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SLLEPPGTRGARLLQGPQHLLTR*ARAGPS
Trigger: GCTGGGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...CTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451271.5
3UTR-3UTR GCA 90 bp CGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCACAGGGCCGACCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGG +
Preference number: 2 (lower is better)
Translates to: RRLHRSTATRSGSWHRADPVATR*TAPPHR
Trigger: CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGG...GTCGGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: CSALSWSRPERGARGCCRKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...CCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp TGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGG +
Preference number: 2 (lower is better)
Translates to: WHRADARAPTRRSKPESSPVATR*TAPPHR
Trigger: CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGG...CGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CGGAAGGCGTCGTGCGGGCCGTGCGCCCCGGGCCCGGACACCCCATCCTGTAGCCCCAGCAGCTCGGGATaGTGTTCCAGACTTCGAGCC +
Preference number: 2 (lower is better)
Translates to: RKASCGPCAPGPDTPSCSPSSSG*CSRLRA
Trigger: GGCTCGAAGTCTGGAACAGCATCCCGAGCTGCTGGG...GCTACAGGATGGGGTGTCCGGGCCCGGGGCGCACGGCCCGCACGACGCCTTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451271.5
3UTR-3UTR CCA 90 bp CTGGCGGCCGCCCCCGAGCGGACGTCCTGTTTCAAGAGCCTCAGCCACCCTTTCACGCGCAGCGGCAGCTaGCACAGGGCCGACGCCAGG +
Preference number: 2 (lower is better)
Translates to: LAAAPERTSCFKSLSHPFTRSGS*HRADAR
Trigger: CCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCGCGT...GAAAGGGTGGCTGAGGCTCTTGAAACAGGACGTCCGCTCGGGGGCGGCCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR CCA 90 bp GGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGGGCCCCCAGGAAGTCTaGCAGTTGGGAGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: GPGHLLRSLLEPPGTRGAGPQEV*QLGGQC
Trigger: ACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCC...CGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 2 (lower is better)
Translates to: QSGGLPEVLVCAGVLPEGAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...CCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp AGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGGGCCCCCAGGAAGTCTaGCAGTTGGGAGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: RARDTCSALSWSRPERGAGPQEV*QLGGQC
Trigger: ACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCC...CGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CAA 90 bp GGGATGGAAGTAGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTaGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGG +
Preference number: 2 (lower is better)
Translates to: GMEVAIQGWLKGPGH*LRSLLEPPGTRGAR
Trigger: CCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTACTTCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: SLHSATAPGEKSKTTTPPACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...GGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CAA 90 bp GTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCA +
Preference number: 2 (lower is better)
Translates to: VQQPALQGQQLQSGG*PEVLVCAGVLPEGA
Trigger: TGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: AGRGPHPEPASTVPLLRAAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...TGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 2 (lower is better)
Translates to: QRQLAQGRRQGAHQALETRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TCGTGCGGGCCGTGCGCCCCGGGCCCGGACACCCCATCCTGTAGCCACTCGCTGGGATGTATTTGTCCATaGGGCAGGCCCATAGCGCTC +
Preference number: 2 (lower is better)
Translates to: SCGPCAPGPDTPSCSHSLGCICP*GRPIAL
Trigger: GAGCGCTATGGGCCTGCCCCATGGACAAATACATCC...CAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCGGGGCGCACGGCCCGCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGCCCCCAGAGGGCCCAGCGCTTGTaGATGTATTTGTCCATGGGG +
Preference number: 2 (lower is better)
Translates to: SLLEPPGTRGARLLQGPQRAQRL*MYLSMG
Trigger: CCCCATGGACAAATACATCCACAAGCGCTGGGCCCT...CTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp AACCCGAGTCATCGGCTGAGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 2 (lower is better)
Translates to: NPSHRLSRGAEPRGPWRPSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...CGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCCATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: VSSCSRAACQRFWCARGSHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...GGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp TGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: WHRADARAPTRRSKPESSSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...CGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 2 (lower is better)
Translates to: GLPEVLVCAGVLPEGADVSPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...AACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp AGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 2 (lower is better)
Translates to: SQLCRVSSCSRAACQRFWSPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp TGTCGAAGCAGGCCCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTCGGTGGCACTGCGTCCTTTaGACAGGCATCGGCCTACAG +
Preference number: 2 (lower is better)
Translates to: CRSRPPRSCRAPGPARSRWHCVL*TGIGLQ
Trigger: CTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCA...CCGACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR CCA 90 bp CGGGCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGGATGTATTTGTCCATaGGGCAGGCCCATAGCGCTC +
Preference number: 2 (lower is better)
Translates to: RARTPHPVATRCTAPPHRGCICP*GRPIAL
Trigger: GAGCGCTATGGGCCTGCCCCATGGACAAATACATCC...CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp CCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCACCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 2 (lower is better)
Translates to: PARSVHDGSTGLRPRAAAPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...TGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 2 (lower is better)
Translates to: AVAVGRLARGSGVRGGPPSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...GGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp CGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: RETKPRAPARSVHDGSTGHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...ACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp TCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCGTAGCACATCGTCTTTaGGAGGCCCCAGGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: SLHSATAPGEKSKTTTPPVAHRL*EAPGSQ
Trigger: CTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTAC...GGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp TCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: SAVAVGRLARGSGVRGGPPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...AGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp TCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTTGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCG +
Preference number: 2 (lower is better)
Translates to: SAVAVGRLARGSGVRGGPCSRAA*QRFWCA
Trigger: CGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA...AGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: AVAVGRLARGSGVRGGPPSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...GGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCAGCCAGCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 2 (lower is better)
Translates to: ASTVPLLRAASTVRPAASRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GCTGGCTGCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGTCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 2 (lower is better)
Translates to: ASSSQLCRVSSCSRAACQSSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...CTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp CAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGA +
Preference number: 2 (lower is better)
Translates to: QTDQTAQGQQALAPPAGRGGTSG*QGSPPG
Trigger: TCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACC...GCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCGAACCTTGTCCACAGTaGCGTTCTCCCAGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: AVAVGRLARGSGVRGGPPEPCPQ*RSPRKA
Trigger: CGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTC...GGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GCACGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: ARCVQQPALQGQQLQSGGAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...GCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: AACQRFWCARGSSLKGQMSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...CATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GCCACACGAGGGCCCAGCGCTTGTGGATGTATTTGTCCATGGGGCAGGCCCATAAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 2 (lower is better)
Translates to: ATRGPSACGCICPWGRPISPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...TATGGGCCTGCCCCATGGACAAATACATCCACAAGCGCTGGGCCCTCGTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CGCTCAGTTCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCCCCTCGTGGAGGCTTTaGTGGGTAGTGAAGTACAGC +
Preference number: 2 (lower is better)
Translates to: RSVHDGSTGLRPRAAAAGPSWRL*WVVKYS
Trigger: GCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGG...GCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGAACTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp CGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTTCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 2 (lower is better)
Translates to: RETKPRAPARSVHDGSTGSSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...ACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCTGCTGTGTGAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: LSPSADTLSQGRAGSCCVKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...CACACAGCAGCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 2 (lower is better)
Translates to: SLHSATAPGEKSKTTTPPKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...GGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAAGGGATCTGTTGTCCTaGGGGCCTCGTGTCTCCAAC +
Preference number: 2 (lower is better)
Translates to: ARETKPRAPARSVHDGSTRDLLS*GPRVSN
Trigger: GTTGGAGACACGAGGCCCCCAGGACAACAGATCCCT...TGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp GCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGCATAGCTGCAGACACTaGCCTGACTGCAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: ARTPHPVATRCTAPPHREHSCRH*PDCRSC
Trigger: ACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATG...CTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp TGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGGATCCTCTCTGATATaGCACTGCGTCCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: CSALSWSRPERGARGCCRGSSLI*HCVLCT
Trigger: TGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCC...CCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR TCA 90 bp AACCTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCACGCGGGGGTCCTCCCTaGAGGGGCAGATGTTCGTCC +
Preference number: 2 (lower is better)
Translates to: NLVHSDVLPGKRWDQWLARGGPP*RGRCSS
Trigger: GGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCG...TGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp TTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: FWCARGSSLKGQMFVLTEPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...CTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CTCTTCCCAGTGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: LFPVPMHGQVDSHTQTEVPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...GACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp ACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCTACGGAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTC +
Preference number: 2 (lower is better)
Translates to: TKPRAPARSVHDGSTGLRKHSCS*SFSELF
Trigger: GAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTT...CCGTAGACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 2 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR CAA 90 bp CACAGAGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: HRAHRLTKLHKGSRH*HLQQDAAGSRVGLE
Trigger: TTCCAGGCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp TCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTGAACCTTGTCCACAGTaGCGTTCTCCCAGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: SAVAVGRLARGSGVRGGPEPCPQ*RSPRKA
Trigger: CGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTC...AGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp AAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: KGSRHLHLQQDAAGSRVGAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...GCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCCTCGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 2 (lower is better)
Translates to: HWPDCRSCSKYSPRRAALAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...GAGGGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp CGGGCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: RARTPHPVATRCTAPPHRTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 2 (lower is better)
Translates to: QTDQTAQGQQALAPPAGRSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...GCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476810.5
3UTR-3UTR CCA 90 bp GCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCCTCGTGGAGGCTTTGCAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: AGLVVSTLQGELPSWRLCKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...GCAAAGCCTCCACGAGGGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp AGGAGGATGAGGGAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGCCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 2 (lower is better)
Translates to: RRMRESAAAKSRQASHTRPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...CCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTCCCTCATCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCAGGGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: VCAGVLPEGADVRPNGVRAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...CCTGACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp ACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: TKLHKGSRHLHLQQDAAGAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...GCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: EVLVCAGVLPEGADVRPNSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...GTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GGCAGGCCAGCCACACGAGGGCCCAGCGCTTGTGGATGTATTTGTCCATGGGGCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 2 (lower is better)
Translates to: GRPATRGPSACGCICPWGRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GCCCCATGGACAAATACATCCACAAGCGCTGGGCCCTCGTGTGGCTGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 2 (lower is better)
Translates to: AVAVGRLARGSGVRGGPPGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...GGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp CTGCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCAGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: LRVKPSHGPLRAQFTTAPVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...TGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp ACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCTACGGGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: TKPRAPARSVHDGSTGLRVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...CCGTAGACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 2 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp CCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCACATAGCTGCAGACACTaGCCTGACTGCAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: PHPVATRCTAPPHRERRAHSCRH*PDCRSC
Trigger: ACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATG...TGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp GTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCCAGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 2 (lower is better)
Translates to: VAFQQWELENLVHSDVLPAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...TGGGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp AGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCATCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 2 (lower is better)
Translates to: SPQTDQTAQGQQALAPPASSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...TGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp AGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCTTGTGGCAATTTTCCCTTGCTTaGGGTGAGTCCTCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: SAAAKSRQASHTRAQRLWQFSLA*GESSSR
Trigger: CCTTGAAGAGGACTCACCCCAAGCAAGGGAAAATTG...CCACAAGCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR GCA 90 bp AATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: NGNSRTLSTVTFSQESGGPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...CCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp AGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: SSCSRAACQRFWCARGSSTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: AACQRFWCARGSSLKGQMTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...CATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTGCAGCTTCCCCTCGTGGAGGCTTTaGTGGGTAGTGAAGTACAGC +
Preference number: 2 (lower is better)
Translates to: SLRGPRESAHKHSCSCSFPSWRL*WVVKYS
Trigger: GCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGG...GAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp GTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 2 (lower is better)
Translates to: VKPSHGPLRAQFTTAPQVGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...GACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp AAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 2 (lower is better)
Translates to: KGSRHLHLQQDAAGSRVGGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...GCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp ACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: TKLHKGSRHLHLQQDAAGVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...GCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GGCAGGCCAGCCACACGAGGGCCCAGCGCTTGTGGATGTATTTGTCCATGGGGCGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: GRPATRGPSACGCICPWGVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...GCCCCATGGACAAATACATCCACAAGCGCTGGGCCCTCGTGTGGCTGGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR CAA 90 bp GAGACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTaGAGCCAGGGCAGGGCCCAGCAGCTCGGGATGCTGTTCCAGACT +
Preference number: 2 (lower is better)
Translates to: ETFRTRCTLSPSADT*SQGRAQQLGMLFQT
Trigger: AGTCTGGAACAGCATCCCGAGCTGCTGGGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451271.5
3UTR-3UTR TCA 90 bp GTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGTCATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: VWFKVMICGPVRFLCHRGHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...ACCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
3UTR-3UTR GCA 90 bp CGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGTTCAAGGTAATGATCTaGGGTCCAGTCAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: RCVQQPALQGQQLQSGGLFKVMI*GPVRFL
Trigger: CAAAAACCTGACTGGACCGCAGATCATTACCTTGAA...CAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp AGGGAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCTTCAAGGTAATGATCTaGGGTCCAGTCAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: RESAAAKSRQASHTRAQRFKVMI*GPVRFL
Trigger: CAAAAACCTGACTGGACCGCAGATCATTACCTTGAA...GCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp CTGAATACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: LNTEAGNQVCVVQGNDLRACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...CCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGTATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: EVLVCAGVLPEGADVRPNVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...GTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp ATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTCCTTGAGAGGCCCTTTTTCTaGGGCTCCGTATTCCCAGAC +
Preference number: 2 (lower is better)
Translates to: MHGQVDSHTQTEVTVGLLERPFF*GSVFPD
Trigger: GTCTGGGAATACGGAGCCCCAGAAAAAGGGCCTCTC...AAGGAGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476810.5
3UTR CAA 90 bp GGTGAGTCCTCTTCAAGGATCCTCTCTGATATGGCACTGCGTCCTTaGCACAGGCATCGGCCTACAGTGGGAATGGACTTGGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: GESSSRILSDMALRP*HRHRPTVGMDLGRG
Trigger: CCCCCTTCCCAAGTCCATTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAGAGGACTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR TCA 90 bp TCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTGGGTTCCAAGGCACAGATCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 2 (lower is better)
Translates to: SWRLCWVVKYSHWVPRHRSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...TCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp GGCAGGCCAGCCACACGAGGGCCCAGCGCTTGTGGATGTATTTGTCCATGGGGCACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: GRPATRGPSACGCICPWGTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...GCCCCATGGACAAATACATCCACAAGCGCTGGGCCCTCGTGTGGCTGGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp CACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCCCCTTCAAGGTAATGATCTaGGGTCCAGTCAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: HSDVLPGKRWDQWLAGVPFKVMI*GPVRFL
Trigger: CAAAAACCTGACTGGACCGCAGATCATTACCTTGAA...GGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CAA 90 bp GGTAGTGAAGTACAGCCACTGGGTTCCAAGGCACAGAGGGATCTGTaGTCCTGGGGGCCTCGTGTCTCCAACAGTAGCACATCGTCTTTG +
Preference number: 2 (lower is better)
Translates to: GSEVQPLGSKAQRDL*SWGPRVSNSSTSSL
Trigger: CAAAGACGATGTGCTACTGTTGGAGACACGAGGCCCCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR TCA 90 bp TCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTGGGTTCCAAGGCACAGAGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: SWRLCWVVKYSHWVPRHRAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...TCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp CATAGCTGCAGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGGCCCACAAGCACTCCTaGAGCTGCAGCTTCTCCGAG +
Preference number: 2 (lower is better)
Translates to: HSCRHWPDCRSCSKYSPRAHKHS*SCSFSE
Trigger: CTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGC...CCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp TTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCTGCTGTGTGGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 2 (lower is better)
Translates to: LSPSADTLSQGRAGSCCVGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...CACACAGCAGCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACAGACTGACCAAAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 2 (lower is better)
Translates to: SLGQPRSSHIPQSPQTDQKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...TTGGTCAGTCTGTGGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 2 (lower is better)
Translates to: VVEFLLVPGLSIGPDSYLSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...GAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATGGGAACTCGAGAACTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: VHLNTEVRVAFQQWELENSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...GTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
3UTR-3UTR CCA 90 bp GAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 2 (lower is better)
Translates to: EYRTRFVPHSLGQPRSSHKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...ATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR TCA 90 bp GAGACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 2 (lower is better)
Translates to: ETFRTRCTLSPSADTLSQAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...CTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR GCA 90 bp GTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 2 (lower is better)
Translates to: VVEFLLVPGLSIGPDSYLRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp GCTTGTGGATGTATTTGTCCATGGGGCAGGCCCATAGCGCTCCCAAGTCATCGTACACAGAGGTTAGGGTaGCCTTTCAGCAATGGGAAC +
Preference number: 2 (lower is better)
Translates to: ACGCICPWGRPIALPSHRTQRLG*PFSNGN
Trigger: GTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGT...ACGATGACTTGGGAGCGCTATGGGCCTGCCCCATGGACAAATACATCCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR CCA 90 bp CATCGTCCCATAGCTGCAGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: HRPIAADTGLTAGLVVSTVKYSH*VPRHRG
Trigger: CCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCAC...AGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATGGGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp ACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACAGACACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: TSLPRAASKQSYTTEPTDTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...GTCTGTGGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CCA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CCA 90 bp GTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGTGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 2 (lower is better)
Translates to: VWFKVMICGPVRFLCHRGGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...ACCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR GCA 90 bp ACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: TEAGNQVCVVQGNDLRSSTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...ACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 72 bp CGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTaGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGC +
Preference number: 3 (lower is better)
Translates to: RLHRSTATRSGS*HRADARAPTRR
Trigger: GCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 72 bp CTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAG +
Preference number: 3 (lower is better)
Translates to: LAGVPTRSPPAQ*RFCGQRARCVQ
Trigger: CTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR TCA 72 bp GGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGC +
Preference number: 3 (lower is better)
Translates to: GAHQALETRVIG*VEEQSRAAPGG
Trigger: GCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR TCA 72 bp ACGCCGCCCTCCTGCAGGGTCTGGCGCCGCTGCGCGTaGAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: TPPSCRVWRRCA*NQATGPCALSS
Trigger: TGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAGCGGCGCCAGACCCTGCAGGAGGGCGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 72 bp GGTGGAGCAGCCTGTCGAAGCAGGCCCCCACGTAGCTaGCGGGCGCCCGGCCCTGCAAGAAGTCGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: GGAACRSRPPRS*RAPGPARSRAA
Trigger: TGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACAGGCTGCTCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 72 bp CTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTaGTGCAGGGCCCCCAGGAAGTCTGGCAGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: LSWSRPERGARG*CRAPRKSGSWE
Trigger: CTCCCAACTGCCAGACTTCCTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp CGCAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAATTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: RSGSWHRADARAPTRRSKLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...TTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp TCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCACAGGGCCTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: SRRLHRSTATRSGSWHRALQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...GGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR GCA 72 bp CCCCGGGCCCGGACACCCCATCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGGGAGAGAAGAGCAAGA +
Preference number: 3 (lower is better)
Translates to: PRARTPHPVATR*TAPPHRERRAR
Trigger: TCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 72 bp GTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGT +
Preference number: 3 (lower is better)
Translates to: VTFSQESGGTSG*QGSPPGARQHS
Trigger: ACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 72 bp CACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCA +
Preference number: 3 (lower is better)
Translates to: HSDVLPGKRWDQ*LAGVPTRSPPA
Trigger: TGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: VSSCSRAACQRFWCARGSLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...GGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 3 (lower is better)
Translates to: AGRGPHPEPASTVPLLRASCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...TGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp AGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCTTGTGGGCACAGAGGGATCTGTaGTCCTGGGGGCCTCGTGTC +
Preference number: 3 (lower is better)
Translates to: SAAAKSRQASHTRAQRLWAQRDL*SWGPRV
Trigger: GACACGAGGCCCCCAGGACAACAGATCCCTCTGTGC...CCACAAGCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 72 bp GTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATG +
Preference number: 3 (lower is better)
Translates to: VSSCSRAACQRF*CARGSSLKGQM
Trigger: CATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 72 bp GGGAGTCCCCGGGGGATGGAAGTAGCTATCCAGGGCTaGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: GSPRGMEVAIQG*LKGPGHLLRSL
Trigger: GAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTACTTCCATCCCCCGGGGACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp TCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCACAGGGCCGGGAACTCGAGAACCTaGTCCACAGTGACGTTCTCC +
Preference number: 3 (lower is better)
Translates to: SRRLHRSTATRSGSWHRAGNSRT*STVTFS
Trigger: GGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCC...GGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR CAA 90 bp CCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 3 (lower is better)
Translates to: PEPASTVPLLRAASTVRPSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...TGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp TCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCGCCCTCGTGGAGGCTTaGCTGGGTAGTGAAGTACAG +
Preference number: 3 (lower is better)
Translates to: SLHSATAPGEKSKTTTPPALVEA*LGSEVQ
Trigger: CTGTACTTCACTACCCAGCAAAGCCTCCACGAGGGC...GGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CAA 90 bp GGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: GLPEVLVCAGVLPEGADVLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...AACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp CTGCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCAATGGCACTGCGTCCTTaGCACAGGCATCGGCCTACA +
Preference number: 3 (lower is better)
Translates to: LRVKPSHGPLRAQFTTAPMALRP*HRHRPT
Trigger: TGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCAT...TGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR GCA 72 bp GGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTCACGTCCACAGTGACG +
Preference number: 3 (lower is better)
Translates to: GPRESAHKHSCS*SFSELFTSTVT
Trigger: CGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CAA 90 bp AGAAGGAGGATGAGGGAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: RRRMRESAAAKSRQASHTPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...CGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTCCCTCATCCTCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GGGCCCAGCGCTTGTGGATGTATTTGTCCATGGGGCAGGCCCATAGCGCTCCCAAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 3 (lower is better)
Translates to: GPSACGCICPWGRPIALPKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...TGGGAGCGCTATGGGCCTGCCCCATGGACAAATACATCCACAAGCGCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp AGGGAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCACGAGGGCCCAGCGCTaGTGGATGTATTTGTCCATG +
Preference number: 3 (lower is better)
Translates to: RESAAAKSRQASHTRAQRTRAQR*WMYLSM
Trigger: CATGGACAAATACATCCACAAGCGCTGGGCCCTCGT...GCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 3 (lower is better)
Translates to: VSSCSRAACQRFWCARGSSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...GGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 3 (lower is better)
Translates to: AACQRFWCARGSSLKGQMRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...CATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp CCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAACGAGGGCCCAGCGCTaGTGGATGTATTTGTCCATG +
Preference number: 3 (lower is better)
Translates to: PHPVATRCTAPPHRERRATRAQR*WMYLSM
Trigger: CATGGACAAATACATCCACAAGCGCTGGGCCCTCGT...TGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR TCA 72 bp GGGGGCCTCGTGTCTCCAACAGTAGCACATCGTCTTTaGGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCT +
Preference number: 3 (lower is better)
Translates to: GGLVSPTVAHRL*EAPGSQPTSTP
Trigger: AGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTACTGTTGGAGACACGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 72 bp TCTTCAGGCTCTTCCCAGTGCCCATGCACGGCCAAGTaGACAGCCACACGCAGACAGAGGTCACAGTCGGTC +
Preference number: 3 (lower is better)
Translates to: SSGSSQCPCTAK*TATRRQRSQSV
Trigger: GACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGAGCCTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR CCA 72 bp GCCACACGCAGACAGAGGTCACAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCTGTCTGCAGGTGCGTA +
Preference number: 3 (lower is better)
Translates to: ATRRQRSQSVSF*HLSTSSVCRCV
Trigger: TACGCACCTGCAGACAGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTGTGACCTCTGTCTGCGTGTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476810.5
3UTR-3UTR CAA 90 bp ATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: IRTSLPRAASKQSYTTEPPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...GGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 3 (lower is better)
Translates to: AASSAGSAVAVGRLARGSRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...AGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CCA 72 bp ACTCTCCAAGGCGAGCTGCCCTCGTGGAGGCTTTGCTaGGTAGTGAAGTACAGCCACTGGGTTCCAAGGCAC +
Preference number: 3 (lower is better)
Translates to: TLQGELPSWRLC*VVKYSHWVPRH
Trigger: GTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGGCAGCTCGCCTTGGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CAA 90 bp GCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 3 (lower is better)
Translates to: AHARPSGQPHADRGHSRSRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...AGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR-3UTR CAA 90 bp GTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTACCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: VPSRTWAEYRTRFVPHSLPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...TAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
3UTR CCA 72 bp CCACTGGGTTCCAAGGCACAGAGGGATCTGTTGTCCTaGGGGCCTCGTGTCTCCAACAGTAGCACATCGTCT +
Preference number: 3 (lower is better)
Translates to: PLGSKAQRDLLS*GPRVSNSSTSS
Trigger: AGACGATGTGCTACTGTTGGAGACACGAGGCCCCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 72 bp TCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGGATCTGTTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: SWRLCWVVKYSH*VPRHRGICCPG
Trigger: CCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 72 bp CTTGGGGTGAGTCCTCTTCAAGGATCCTCTCTGATATaGCACTGCGTCCTTTGCACAGGCATCGGCCTACAG +
Preference number: 3 (lower is better)
Translates to: LGVSPLQGSSLI*HCVLCTGIGLQ
Trigger: CTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAGAGGACTCACCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR CAA 90 bp TCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 3 (lower is better)
Translates to: SRTWAEYRTRFVPHSLGQSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...CTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
3UTR GCA 72 bp CTTCAAGGATCCTCTCTGATATGGCACTGCGTCCTTTaGACAGGCATCGGCCTACAGTGGGAATGGACTTGG +
Preference number: 3 (lower is better)
Translates to: LQGSSLIWHCVL*TGIGLQWEWTW
Trigger: CCAAGTCCATTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR GCA 72 bp GTGAGTCCTCTTCAAGGATCCTCTCTGATATGGCACTaGGTCCTTTGCACAGGCATCGGCCTACAGTGGGAA +
Preference number: 3 (lower is better)
Translates to: VSPLQGSSLIWH*VLCTGIGLQWE
Trigger: TTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAGAGGACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR GCA 72 bp AAGTCATCGTCCCATAGCTGCAGACACTGGCCTGACTaGAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCT +
Preference number: 3 (lower is better)
Translates to: KSSSHSCRHWPD*RSCSKYSPRRA
Trigger: AGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATGGGACGATGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
3UTR CCA 72 bp CACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATaGGAACTCGAGAACCTTGTCCACAGTGACGTTCTC +
Preference number: 3 (lower is better)
Translates to: HLNTEVRVAFQQ*ELENLVHSDVL
Trigger: GAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
3UTR CCA 72 bp CTGCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATaGGAACTCGAGAACCTTGTCCACAGTGACGTTCTC +
Preference number: 3 (lower is better)
Translates to: LLNTEVRVAFQQ*ELENLVHSDVL
Trigger: GAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
3UTR-3UTR CAA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 3 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
3UTR-3UTR CAA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 3 (lower is better)
Translates to: GNQVCVVQGNDLRSSQVFRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...AAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
3UTR CCA 72 bp GGTAATGATCTGCGGTCCAGTCAATTTTCCCTTGCTTaGGGTGAGTCCTCTTCAAGGATCCTCTCTGATATG +
Preference number: 3 (lower is better)
Translates to: GNDLRSSQFSLA*GESSSRILSDM
Trigger: CATATCAGAGAGGATCCTTGAAGAGGACTCACCCCAAGCAAGGGAAAATTGACTGGACCGCAGATCATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR GCA 90 bp GGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCACCACGCCGCCCTCCTaGAGGGTCTGGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GARQHSAASAGSEHGASSTTPPS*RVWRRC
Trigger: GCAGCGGCGCCAGACCCTGCAGGAGGGCGGCGTGGT...GCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCGGGGCGCGAGGCTGCTaGAGGGCCCCCAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: QRQLAQGRRQGAHQALETGARGC*RAPRKS
Trigger: AGACTTCCTGGGGGCCCTGCAGCAGCCTCGCGCCCC...GGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGG +
Preference number: 4 (lower is better)
Translates to: GPGHLLRSLLEPPGTRGAPVATR*TAPPHR
Trigger: CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGG...CGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AACCCGAGTCATCGGCTGAGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGCCGGGCGCCCGGCCCTaGAAGAAGTCGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: NPSHRLSRGAEPRGPWRPPGARP*KKSGST
Trigger: CGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGG...CGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCGGGGCGCGAGGCTGCTaGAGGGCCCCCAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GARQHSAASAGSEHGASSGARGC*RAPRKS
Trigger: AGACTTCCTGGGGGCCCTGCAGCAGCCTCGCGCCCC...GCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CGCAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSGSWHRADARAPTRRSKQWVAS*GPTSLS
Trigger: GGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTG...TTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CGGGCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: RARTPHPVATRCTAPPHRSPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGTCGAAGCAGGCCCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTCGGGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: CRSRPPRSCRAPGPARSRGGTSG*QGSPPG
Trigger: TCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACC...CCGACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CAA 72 bp TGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTaGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WLKGPGHLLRSL*EPPGTRGARLL
Trigger: CAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp TGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGTTGGGAGGGCAGTGTaGAGACGGGCACGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: CSALSWSRPERGARGCCRVGRAV*RRARCG
Trigger: TCCGCACCGTGCCCGTCTTCACACTGCCCTCCCAAC...CCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QRQLAQGRRQGAHQALETHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...GGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCCTGTCGAAGCAGGCCCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: ACRSRPPRSCRAPGPARSAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...ACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCCTGTCGAAGCAGGCCCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ACRSRPPRSCRAPGPARSSPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...ACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGACCACGCCGCCCTCCTaGAGGGTCTGGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSSQLCRVSSCSRAACQTTPPS*RVWRRC
Trigger: GCAGCGGCGCCAGACCCTGCAGGAGGGCGGCGTGGT...CTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: WHRADARAPTRRSKPESSKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...CGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCAGCCAAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: PPAQCRFCGQRARCVQQPKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...TGGCTGCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp ACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCTACGGACGCGCAGCGGCAGCTaGCACAGGGCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: TKPRAPARSVHDGSTGLRTRSGS*HRADAR
Trigger: CCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCGCGT...CCGTAGACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCCTGTCGAAGCAGGCCCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTTGCTCCGCTCTCTCTTaGAGCCGCCCGGAACGCGGG +
Preference number: 4 (lower is better)
Translates to: ACRSRPPRSCRAPGPARSCSALS*SRPERG
Trigger: CCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA...ACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTACCACGCCGCCCTCCTaGAGGGTCTGGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RETKPRAPARSVHDGSTGTTPPS*RVWRRC
Trigger: GCAGCGGCGCCAGACCCTGCAGGAGGGCGGCGTGGT...ACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CGGAAGGCGTCGTGCGGGCCGTGCGCCCCGGGCCCGGACACCCCATCCTGTAGCCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: RKASCGPCAPGPDTPSCSQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...GCTACAGGATGGGGTGTCCGGGCCCGGGGCGCACGGCCCGCACGACGCCTTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CGCTCAGTTCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RSVHDGSTGLRPRAAAAGKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...GCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGAACTGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCCATCTGCTGACACGTTaGGCCAGGGCAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AVAVGRLARGSGVRGGPPHLLTR*ARAGPS
Trigger: GCTGGGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...GGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR TCA 90 bp GCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGCGCGGGGGTCCTCCCTaGAGGGGCAGATGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: ASSSQLCRVSSCSRAACQRGGPP*RGRCSS
Trigger: GGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCG...CTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ARTPHPVATRCTAPPHREPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...CTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: AACQRFWCARGSSLKGQMAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...CATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: CRVSSCSRAACQRFWCARGGTSG*QGSPPG
Trigger: TCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACC...CCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGAAGCGGTGGGACCAGTaGCTGGCAGGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RCVQQPALQGQQLQSGGLKRWDQ*LAGVPT
Trigger: GGTGGGGACCCCTGCCAGCCACTGGTCCCACCGCTT...CAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAAGGGATCTGTTGTCCTaGGGGCCTCGTGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: AGRGPHPEPASTVPLLRARDLLS*GPRVSN
Trigger: GTTGGAGACACGAGGCCCCCAGGACAACAGATCCCT...TGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGAGCCGCGCGGCCCCTaGCGGCCGCTTTCGCGTGAT +
Preference number: 4 (lower is better)
Translates to: AASSAGSAVAVGRLARGSEPRGP*RPLSRD
Trigger: ATCACGCGAAAGCGGCCGCCAGGGGCCGCGCGGCTC...AGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp CGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCACAGGGCCGACTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: RRLHRSTATRSGSWHRADSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...GTCGGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CGCAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAATGTTCACGTCCACAGTaGCGTTCTCCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: RSGSWHRADARAPTRRSKCSRPQ*RSPRKA
Trigger: CGCTTTCCTGGGAGAACGTCACTGTGGACGTGAACA...TTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCAGCCAGCCAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASTVPLLRAASTVRPAASQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...GCTGGCTGCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: GPGHLLRSLLEPPGTRGARERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...CGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGTGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: SRAACQRFWCARGSSLKGCSRAA*QRFWCA
Trigger: CGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA...CCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGTGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: QSGGLPEVLVCAGVLPEGCSRAA*QRFWCA
Trigger: CGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA...CCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCATGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: PARSVHDGSTGLRPRAAACSRAA*QRFWCA
Trigger: CGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA...TGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGG +
Preference number: 4 (lower is better)
Translates to: KGSRHLHLQQDAAGSRVGPVATR*TAPPHR
Trigger: CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGG...GCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCATGGCACTGCGTCCTTTaGACAGGCATCGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: PEPASTVPLLRAASTVRPWHCVL*TGIGLQ
Trigger: CTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCA...TGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARETKPRAPARSVHDGSTACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...TGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: VHSDVLPGKRWDQWLAGVGGTSG*QGSPPG
Trigger: TCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACC...GACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGCGCCCGGCCCTGCAAGAAGTCGGGCAGCACGCAGCTGAGCGAGGCGCGGAAGAGGGATCTGTTGTCCTaGGGGCCTCGTGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GARPCKKSGSTQLSEARKRDLLS*GPRVSN
Trigger: GTTGGAGACACGAGGCCCCCAGGACAACAGATCCCT...CTTCCGCGCCTCGCTCAGCTGCGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCGGTACGGCGTCCGGGTaGAGCAGCCTGTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSCSRAACQRFWCARGSGTASG*SSLSKQ
Trigger: CTGCTTCGACAGGCTGCTCCACCCGGACGCCGTACC...GGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGCAGGAAGTCTGGCAGTTaGGAGGGCAGTGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: LRSLLEPPGTRGARLLQGRKSGS*EGSVKT
Trigger: CGTCTTCACACTGCCCTCCCAACTGCCAGACTTCCT...GCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CAA 72 bp CCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PALQGQQLQSGG*PEVLVCAGVLP
Trigger: AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
3UTR CAA 72 bp GTAGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTaGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGG +
Preference number: 4 (lower is better)
Translates to: VAIQGWLKGPGH*LRSLLEPPGTR
Trigger: CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp AGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCCGCGGGGGTCCTCCCTaGAGGGGCAGATGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: SSQLCRVSSCSRAACQRFRGGPP*RGRCSS
Trigger: GGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCG...GAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: AACQRFWCARGSSLKGQMTRVIG*VEEQSR
Trigger: GCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGT...CATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CTGCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVKPSHGPLRAQFTTAPHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...TGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGGCGGCCGCTTTCGCGTaGTCCTTTTTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARTPHPVATRCTAPPHREAAAFA*SFLRRR
Trigger: CCTCCTTCTCAAAAAGGATCACGCGAAAGCGGCCGC...CTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp TGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: CSRAACQRFWCARGSSLKGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...CTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp ACTCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: TRCTAPPHRERRARPPRRGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...GCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSCSRAACQRFWCARGSSPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCTGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: SSCSRAACQRFWCARGSSCSRAA*QRFWCA
Trigger: CGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA...GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: SQLCRVSSCSRAACQRFWAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGGCCCACAAGCACTCCTaGAGCTGCAGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SRAACQRFWCARGSSLKGAHKHS*SCSFSE
Trigger: CTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGC...CCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CTCCAAGGCGAGCTGCCCTCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACCCGGGCGCCCGGCCCTaGAAGAAGTCGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LQGELPSWRLCWVVKYSHPGARP*KKSGST
Trigger: CGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGG...GTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGGCAGCTCGCCTTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp ACTCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCAGGGCCCGGGACACTTaGTCCGCTCTCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRCTAPPHRERRARPPRRRARDT*SALSWS
Trigger: GCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCT...GCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ARTPHPVATRCTAPPHREQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...CTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: EGPGTLAPLSLGAARNAGQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...CCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGCCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LKGPGHLLRSLLEPPGTRPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTAGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGGTGGGACCAGTGGCTaGCAGGGGTCCCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: VAIQGWLKGPGHLLRSLLGGTSG*QGSPPG
Trigger: TCCGGGTGGGGACCCCTGCCAGCCACTGGTCCCACC...CAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGAGGGCCCAGCGCTTGTaGATGTATTTGTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RARDTCSALSWSRPERGARAQRL*MYLSMG
Trigger: CCCCATGGACAAATACATCCACAAGCGCTGGGCCCT...CGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGCCCCCAGGAAGTCTaGCAGTTGGGAGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: CSRAACQRFWCARGSSLKGPQEV*QLGGQC
Trigger: ACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCC...CTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VHSDVLPGKRWDQWLAGVQWVAS*GPTSLS
Trigger: GGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTG...GACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp AGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSQLCRVSSCSRAACQRFQWVAS*GPTSLS
Trigger: GGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTG...GAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp TGTCGAAGCAGGCCCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTCGGGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: CRSRPPRSCRAPGPARSRAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...CCGACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGGGCCTGCTTCGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGCGCGGGGGTCCTCCCTaGAGGGGCAGATGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: LVHSDVLPGKRWDQWLAGRGGPP*RGRCSS
Trigger: GGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCG...CCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR TCA 90 bp AACCCGAGTCATCGGCTGAGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGGAACCTTGTCCACAGTaGCGTTCTCCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: NPSHRLSRGAEPRGPWRPEPCPQ*RSPRKA
Trigger: CGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTC...CGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp GGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTGTTGGGAGGGCAGTGTaGAGACGGGCACGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: GLPEVLVCAGVLPEGADVVGRAV*RRARCG
Trigger: TCCGCACCGTGCCCGTCTTCACACTGCCCTCCCAAC...AACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: RPAASSAGSAVAVGRLARGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...TCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGGGAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCCAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RESAAAKSRQASHTRAQRQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...GCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGGGCCCGGAGCAGGCACGATGTCCCCAGGCAGGCAGAGTATGTCACCCAGAGGCAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GARSRHDVPRQAEYVTQRQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...CCTCTGGGTGACATACTCTGCCTGCCTGGGGACATCGTGCCTGCTCCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR GCA 90 bp CAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: QSGGLPEVLVCAGVLPEGWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...CCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: ARTPHPVATRCTAPPHRERERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...CTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTAGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGCACAGTGCCGCTTCTaGGGGCAGCGAGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: VAIQGWLKGPGHLLRSLLAQCRF*GQRARC
Trigger: GCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGC...CAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: FWCARGSSLKGQMFVLTESPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...CTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EGPGTLAPLSLGAARNAGKHSCS*SFSELF
Trigger: GAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTT...CCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGCCCACAAGCACTCCTaGAGCTGCAGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPAHKHS*SCSFSE
Trigger: CTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGC...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGAGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCACCGGGCGCCCGGCCCTaGAAGAAGTCGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: QSPQTDQTAQGQQALAPPPGARP*KKSGST
Trigger: CGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGG...TGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRVSSCSRAACQRFWCARVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...CCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: RCVQQPALQGQQLQSGGLPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...CAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTGCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LRVKPSHGPLRAQFTTAPPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...TGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGTCTGGCGCCGCTGCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: GLAPLRVKPSHGPLRAQFKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...GAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAGCGGCGCCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CAGCGGCAGCTGGCACAGGGCCGACGCCAGGGCGCCCACCAGGCGCTCGAAACCGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: QRQLAQGRRQGAHQALETVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...GGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCGGCCCTGTGCCAGCTGCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGCACACAGAGGTTAGGGTaGCCTTTCAGCAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: LRSLLEPPGTRGARLLQGTQRLG*PFSNGN
Trigger: GTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGT...GCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR CCA 90 bp CCCCACGTAGCTGCCGGGCGCCCGGCCCTGCAAGAAGTCGGGCAGCACGCAGCTCATAGCTGCAGACACTaGCCTGACTGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PHVAAGRPALQEVGQHAAHSCRH*PDCRSC
Trigger: ACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATG...AGCTGCGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCCCGGCAGCTACGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGAGGGCCCAGCGCTTGTaGATGTATTTGTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: EGPGTLAPLSLGAARNAGRAQRL*MYLSMG
Trigger: CCCCATGGACAAATACATCCACAAGCGCTGGGCCCT...CCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCAGGGGTACGGCGTCCGGGTaGAGCAGCCTGTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VCAGVLPEGADVRPNGVRGTASG*SSLSKQ
Trigger: CTGCTTCGACAGGCTGCTCCACCCGGACGCCGTACC...CCTGACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCTTGGGCCCCCAGGAAGTCTaGCAGTTGGGAGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ESAAAKSRQASHTRAQRLGPQEV*QLGGQC
Trigger: ACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCC...CAAGCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: QSGGLPEVLVCAGVLPEGKESTT*AWREAC
Trigger: GCATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...CCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR TCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCCATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LVCAGVLPEGADVRPNGVHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...GACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCGGAGCGGGTGGGAGCTaGAGCTGTTCCAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VHSDVLPGKRWDQWLAGVGAGGS*SCSKPR
Trigger: TCTGGGCTTGGAACAGCTTCAGCTCCCACCCGCTCC...GACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR GCA 90 bp AGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: SQLCRVSSCSRAACQRFWGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: AIQGWLKGPGHLLRSLLESTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...CTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCTGCAGTCGGGCGGCTTaGCAGAGGTTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LVCAGVLPEGADVRPNGVCSRAA*QRFWCA
Trigger: CGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA...GACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCAGGGCCCGGGACACTTaGTCCGCTCTCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VHSDVLPGKRWDQWLAGVRARDT*SALSWS
Trigger: GCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCT...GACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTATACCACAGAGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGIPQSP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCTCTGTGGTAT...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434756.5
CDS-3UTR CCA 90 bp ACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TKLHKGSRHLHLQQDAAGVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...GCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVCAGVLPEGADVRPNGVVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...GACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ASSSQLCRVSSCSRAACQQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...CTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGCGCCCGGCCCTGCAAGAAGTCGGGCAGCACGCAGCTGAGCGAGGCGCGGAAGGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: GARPCKKSGSTQLSEARKVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...CTTCCGCGCCTCGCTCAGCTGCGTGCTGCCCGACTTCTTGCAGGGCCGGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CPCTAKWTATRRQRSQSVACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...GACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp ACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCGGCCCCCAGGAAGTCTaGCAGTTGGGAGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TKLHKGSRHLHLQQDAAGGPQEV*QLGGQC
Trigger: ACACTGCCCTCCCAACTGCCAGACTTCCTGGGGGCC...GCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: CRVSSCSRAACQRFWCARACTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGC...CCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR TCA 90 bp CAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTDQTAQGQQALAPPAGRQWVAS*GPTSLS
Trigger: GGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTG...GCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCGAGCTGTTCACCTaGACACAGAGGTTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSSCSRAACQRFWCARGSSELFT*TQRLGW
Trigger: CCACCCTAACCTCTGTGTTCAGGTGAACAGCTCGGA...GGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR TCA 90 bp AGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SYPGLAEGPGTLAPLSLGTRVIG*VEEQSR
Trigger: GCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGT...TCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTTGTTCACGTCCACAGTaGCGTTCTCCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPCSRPQ*RSPRKA
Trigger: CGCTTTCCTGGGAGAACGTCACTGTGGACGTGAACA...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCGACAGACCCAGCTCTTaGCCCTTCCCCGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGSRHLHLQQDAAGSRVGDRPSS*PFPVLL
Trigger: GAGAAGAACGGGGAAGGGGCAAGAGCTGGGTCTGTC...GCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR GCA 90 bp GCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACACTGCAGTCAGGCAGCTaGTGTGTGTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ARETKPRAPARSVHDGSTLQSGS*CVWLSS
Trigger: GGAACTCAACCACACACAGCAGCTGCCTGACTGCAG...TGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR GCA 90 bp GCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ARETKPRAPARSVHDGSTKHSCS*SFSELF
Trigger: GAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTT...TGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACGTCCACAGTGACGTTCTCCCAGCCTGTAGCCACTCGCTaGACAGCGCCACCGCACCGG +
Preference number: 4 (lower is better)
Translates to: SCSCSFSELFTSTVTFSQPVATR*TAPPHR
Trigger: CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGG...CTGGGAGAACGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp TTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGAGGGCCCGGGACACTTaGTCCGCTCTCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FWCARGSSLKGQMFVLTERARDT*SALSWS
Trigger: GCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCT...CTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGACGGAGGGGGCTGTGCTaGGTAGTTTGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: RPAASSAGSAVAVGRLARRRGLC*VVCALS
Trigger: AGAGAGTGCACAAACTACCCAGCACAGCCCCCTCCG...TCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCCGGAGGGGGCTGTGCTaGGTAGTTTGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: VKPSHGPLRAQFTTAPQVRRGLC*VVCALS
Trigger: AGAGAGTGCACAAACTACCCAGCACAGCCCCCTCCG...GACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AGGGAAAGCGCAGCGGCAAAGAGTAGGCAGGCCAGCCACACGAGGGCCCAGCGCAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: RESAAAKSRQASHTRAQRKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...GCGCTGGGCCCTCGTGTGGCTGGCCTGCCTACTCTTTGCCGCTGCGCTTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CAGTGTGAAGACGGGCACGGTGCGGAAAAGGGCGGGTACGGCGTCCGGGTGGAGGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: QCEDGHGAEKGGYGVRVEVKYSH*VPRHRG
Trigger: CCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCAC...CTCCACCCGGACGCCGTACCCGCCCTTTTCCGCACCGTGCCCGTCTTCACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp AAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTGGCGAGCTGCCCTCGTaGAGGCTTTGCTGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: KLHKGSRHLHLQQDAAGSGELPS*RLCWVV
Trigger: CACTACCCAGCAAAGCCTCCACGAGGGCAGCTCGCC...ACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR CCA 90 bp TGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCTCCTAGGGCCCAGCGCTTGTaGATGTATTTGTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: CTAPPHRERRARPPRRPPRAQRL*MYLSMG
Trigger: CCCCATGGACAAATACATCCACAAGCGCTGGGCCCT...AGGAGGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp ATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACGCGCAGCGGCAGCTaGCACAGGGCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: IRTSLPRAASKQSYTTEPTRSGS*HRADAR
Trigger: CCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCGCGT...GGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TTCCCAGTGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGGTACGGCGTCCGGGTaGAGCAGCCTGTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FPVPMHGQVDSHTQTEVTGTASG*SSLSKQ
Trigger: CTGCTTCGACAGGCTGCTCCACCCGGACGCCGTACC...TGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCACTGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCACAGAGGGATCTGTTGTCCTGGGGGCCTCGTGTCTCCAACAGTAGCACATCGTGCTCCGCTCTCTCTTaGAGCCGCCCGGAACGCGGG +
Preference number: 4 (lower is better)
Translates to: AQRDLLSWGPRVSNSSTSCSALS*SRPERG
Trigger: CCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA...CGATGTGCTACTGTTGGAGACACGAGGCCCCCAGGACAACAGATCCCTCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp AGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCGAGCCGCGCGGCCCCTaGCGGCCGCTTTCGCGTGAT +
Preference number: 4 (lower is better)
Translates to: RHWPDCRSCSKYSPRRAAEPRGP*RPLSRD
Trigger: ATCACGCGAAAGCGGCCGCCAGGGGCCGCGCGGCTC...GGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp AGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCAATTTTCCCTTGCTTaGGGTGAGTCCTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RARDTCSALSWSRPERGAQFSLA*GESSSR
Trigger: CCTTGAAGAGGACTCACCCCAAGCAAGGGAAAATTG...CGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp CGCGCGGCCCCTGGCGGCCGCTTTCGCGTGATCCTTTTTGAGAAGGAGGATGAGGTAGCACATCGTCTTTaGGAGGCCCCAGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RAAPGGRFRVILFEKEDEVAHRL*EAPGSQ
Trigger: CTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTAC...CTCATCCTCCTTCTCAAAAAGGATCACGCGAAAGCGGCCGCCAGGGGCCGCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp GCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGTAGCACATCGTCTTTaGGAGGCCCCAGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AASSAGSAVAVGRLARGSVAHRL*EAPGSQ
Trigger: CTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTAC...AGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp AACCCGAGTCATCGGCTGAGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGTTCAAGGATCCTCTCTaGTATGGCACTGCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: NPSHRLSRGAEPRGPWRPFKDPL*YGTASF
Trigger: AAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAA...CGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp CTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGTGCACTGTCACAGGATaGCTTGCTCACCATGCACGG +
Preference number: 4 (lower is better)
Translates to: LHKGSRHLHLQQDAAGSRCTVTG*LAHHAR
Trigger: CCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCA...CCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS-3UTR GCA 90 bp AGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: RCTLSPSADTLSQGRAGSGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...GCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: SAGSAVAVGRLARGSGVRWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...GCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RCTLSPSADTLSQGRAGSSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...GCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TTCCCAGTGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FPVPMHGQVDSHTQTEVTSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...TGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCACTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCTGCTGTGTGCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSPSADTLSQGRAGSCCVPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...CACACAGCAGCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTGCAGCTTCCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLRGPRESAHKHSCSCSFPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...GAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: AASSAGSAVAVGRLARGSSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...AGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VHSDVLPGKRWDQWLAGVSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...GACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SAGSAVAVGRLARGSGVRSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...GCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp ACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TDQTAQGQQALAPPAGRSVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...GCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTGCAGCTTCGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLRGPRESAHKHSCSCSFVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...GAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCCAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VHSDVLPGKRWDQWLAGVQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...GACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCCAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LVCAGVLPEGADVRPNGVQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...GACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGTCTGGCGCCGCTGCGCGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 4 (lower is better)
Translates to: GLAPLRVKPSHGPLRAQFGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...GAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAGCGGCGCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TCGAGAACCTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRTLSTVTFSQESGGTSGACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...GCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTCTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTGCAGCTTCGGCGAGCTGCCCTCGTaGAGGCTTTGCTGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SLRGPRESAHKHSCSCSFGELPS*RLCWVV
Trigger: CACTACCCAGCAAAGCCTCCACGAGGGCAGCTCGCC...GAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp ACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGACGCGCAGCGGCAGCTaGCACAGGGCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRFVPHSLGQPRSSHIPQTRSGS*HRADAR
Trigger: CCTGGCGTCGGCCCTGTGCCAGCTGCCGCTGCGCGT...CTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAATCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGATCCTCTCTGATATaGCACTGCGTCCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: LKGPGHLLRSLLEPPGTRGSSLI*HCVLCT
Trigger: TGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCC...CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp GAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: EVLVCAGVLPEGADVRPNSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...GTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GGGTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCCGCGGGGGTCCTCCCTaGAGGGGCAGATGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: GWPFSNGNSRTLSTVTFSRGGPP*RGRCSS
Trigger: GGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCG...GGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCCTCGTTGGGAGGGCAGTGTaGAGACGGGCACGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: HWPDCRSCSKYSPRRAALVGRAV*RRARCG
Trigger: TCCGCACCGTGCCCGTCTTCACACTGCCCTCCCAAC...GAGGGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp AGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCACATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPQTDQTAQGQQALAPPAHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...TGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476810.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CGTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTTTCCCTTGCTTGGGGTaGGTCCTCTTCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: RETKPRAPARSVHDGSTGFPCLG*VLFKDP
Trigger: AGGATCCTTGAAGAGGACTCACCCCAAGCAAGGGAA...ACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGAGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: QSPQTDQTAQGQQALAPPGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...TGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCCAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RCTLSPSADTLSQGRAGSQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...GCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTATGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: NCTRAAGTCTSSRTQRAVWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...TACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: CPCTAKWTATRRQRSQSVWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...GACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: AHARPSGQPHADRGHSRSWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...AGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCCCCAGCAGCTCGGGATaGTGTTCCAGACTTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QTDQTAQGQQALAPPAGRPSSSG*CSRLRA
Trigger: GGCTCGAAGTCTGGAACAGCATCCCGAGCTGCTGGG...GCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR GCA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCCCTCGTGGAGGCTTTaGTGGGTAGTGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGPSWRL*WVVKYS
Trigger: GCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGG...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR CCA 90 bp AACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTACAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NCTRAAGTCTSSRTQRAVQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...TACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCCCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QTDQTAQGQQALAPPAGRPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...GCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTCCTTCTGGCACCTCAGCACCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GQPHADRGHSRSPSGTSAPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...TGCTGAGGTGCCAGAAGGAGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR CCA 90 bp AGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 4 (lower is better)
Translates to: SRAACQRFWCARGSSLKGGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...CCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGCCGCCCGGAACGCGGGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 4 (lower is better)
Translates to: LKGPGHLLRSLLEPPGTRGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGGTGGCCTTTCAGCAATaGGAACTCGAGAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: ASSSQLCRVSSCSRAACQVAFQQ*ELENLV
Trigger: GACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCAC...CTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR CAA 72 bp TGGGGGCCTCGTGTCTCCAACAGTAGCACATCGTCTTaGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: WGPRVSNSSTSS*RGPRESAHKHS
Trigger: GGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTACTGTTGGAGACACGAGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp CACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCCTCACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HWPDCRSCSKYSPRRAALTRVIG*VEEQSR
Trigger: GCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGT...GAGGGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp CAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTTTCAAGGATCCTCTCTaGTATGGCACTGCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QLQSGGLPEVLVCAGVLPFKDPL*YGTASF
Trigger: AAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAA...AGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR TCA 90 bp AGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTTCCCTTGCTTGGGGTaGGTCCTCTTCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SQLCRVSSCSRAACQRFWFPCLG*VLFKDP
Trigger: AGGATCCTTGAAGAGGACTCACCCCAAGCAAGGGAA...CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGGTGCTGGGTAGTTTGTaGACTCTCTGTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SQLCRVSSCSRAACQRFWVLGSL*TLCPGS
Trigger: ACTCCCAGGACAGAGAGTGCACAAACTACCCAGCAC...CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGAGTATGTCACCCAGAGGCGGCAGGAGAGGCCCTTTTTCTGGGGCTCCGTATTAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVCHPEAAGEALFLGLRISTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...AATACGGAGCCCCAGAAAAAGGGCCTCTCCTGCCGCCTCTGGGTGACATACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR GCA 90 bp TCGCTGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLHSATAPGEKSKTTTPPTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...GGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp ACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTAGCCCGCCAGCACAGTaGCGCTTCTGCGGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: TEAGNQVCVVQGNDLRSSSPPAQ*RFCGQR
Trigger: TCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCT...ACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SYPGLAEGPGTLAPLSLGKHSCS*SFSELF
Trigger: GAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTT...TCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTGGGTTCCAAGGCACAGAGGGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VEALLGSEVQPLGSKAQRVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...CCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTGCAGCTTCCAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLRGPRESAHKHSCSCSFQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...GAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp TGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: CPCTAKWTATRRQRSQSVKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...GACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RHWPDCRSCSKYSPRRAAACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...GGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCATAGCTGCAGACACTaGCCTGACTGCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLPEVLVCAGVLPEGADVHSCRH*PDCRSC
Trigger: ACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATG...AACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp TCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACGTCCACAGTGACGTTCTCCCAGTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: SCSCSFSELFTSTVTFSQSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...CTGGGAGAACGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp TCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACGTCCACAGTGACGTTCTCCCAGTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: SCSCSFSELFTSTVTFSQWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...CTGGGAGAACGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp CCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSRTWAEYRTRFVPHSLGSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...CCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTTCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: RTWAEYRTRFVPHSLGQPSSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...AGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VRPAASSAGSAVAVGRLATFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...GGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: RCTLSPSADTLSQGRAGSRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACGTCCACAGTGACGTTCTCCCAGTCCAGCAGCCAGCTCTaGAGGGTCAGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SCSCSFSELFTSTVTFSQSSSQL*RVSSCS
Trigger: ACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGA...CTGGGAGAACGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp CGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTGCCCACAAGCACTCCTaGAGCTGCAGCTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: RTWAEYRTRFVPHSLGQPAHKHS*SCSFSE
Trigger: CTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGC...AGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCAGACACTGGCCTGACTaGAGGTCTTGTAGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: KGSRHLHLQQDAAGSRVGRHWPD*RSCSKY
Trigger: GTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCT...GCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR GCA 90 bp ACTGCGTCCTTTGCACAGGCATCGGCCTACAGTGGGAATGGACTTGGGAAGGGGTGGCACTGCGTCCTTTaGACAGGCATCGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: TASFAQASAYSGNGLGKGWHCVL*TGIGLQ
Trigger: CTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCA...CCCCTTCCCAAGTCCATTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR CCA 90 bp CACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: HRLTKLHKGSRHLHLQQDQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...GTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: SSQLCRVSSCSRAACQRFVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...GAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: SQLCRVSSCSRAACQRFWVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGTGGCCTTTCAGCAATaGGAACTCGAGAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: AASSAGSAVAVGRLARGSVAFQQ*ELENLV
Trigger: GACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCAC...AGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCGGATGTATTTGTCCATaGGGCAGGCCCATAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RCTLSPSADTLSQGRAGSGCICP*GRPIAL
Trigger: GAGCGCTATGGGCCTGCCCCATGGACAAATACATCC...GCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CATCGTCCCATAGCTGCAGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTTGCTCCGCTCTCTCTTaGAGCCGCCCGGAACGCGGG +
Preference number: 4 (lower is better)
Translates to: HRPIAADTGLTAGLVVSTCSALS*SRPERG
Trigger: CCCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCA...AGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATGGGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp CCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGGTAGCTATCCAGGGCTaGCTGAAGGGCCCGGGACAC +
Preference number: 4 (lower is better)
Translates to: PSRTWAEYRTRFVPHSLGVAIQG*LKGPGH
Trigger: GTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC...CCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACAGACTGACAAGCCCAGAATTTGGTaGCACCCCAGAGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLGQPRSSHIPQSPQTDKPRIW*HPRGGR
Trigger: CCTGCCGCCTCTGGGGTGCCACCAAATTCTGGGCTT...GTCAGTCTGTGGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTCGCGGGGGTCCTCCCTaGAGGGGCAGATGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQVFRGGPP*RGRCSS
Trigger: GGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCG...AAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp AGGCAGCTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RQLLCVVEFLLVPGLSIGHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...TCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGCAGGCAGCTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATACAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRQLLCVVEFLLVPGLSIQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...TATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAGCTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp ACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: TFRTRCTLSPSADTLSQGSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...GCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGTAGCACCAGCTCTGTCTaGAGGTGCGTAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VWFKVMICGPVRFLCHRGSTSSV*RCVGAS
Trigger: GCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCT...ACCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GGCAGGCAGCTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATATCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GRQLLCVVEFLLVPGLSISSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...TATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAGCTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424206.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGCCAGAGGTTCTGGTGTaGGCGGGGGTCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGPEVLV*AGVLPE
Trigger: TTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGG...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp CACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACATGACTTGCTCACCATaGACGGCCAAGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: HRLTKLHKGSRHLHLQQDMTCSP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCAT...GTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS-3UTR CCA 90 bp GAGGTTAGGGTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EVRVAFQQWELENLVHSDVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...GTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RTWAEYRTRFVPHSLGQPQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...AGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGACACAGAGGTTAGGGTaGCCTTTCAGCAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: FWCARGSSLKGQMFVLTETQRLG*PFSNGN
Trigger: GTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGT...CTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACGTCCACAGTGACGTTCTCCCAGGGATGTATTTGTCCATaGGGCAGGCCCATAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SCSCSFSELFTSTVTFSQGCICP*GRPIAL
Trigger: GAGCGCTATGGGCCTGCCCCATGGACAAATACATCC...CTGGGAGAACGTCACTGTGGACGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQVFQWVAS*GPTSLS
Trigger: GGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTG...AAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp CAGCGCTTGTGGATGTATTTGTCCATGGGGCAGGCCCATAGCGCTCCCAAGTCAGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: QRLWMYLSMGQAHSAPKSAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...TGACTTGGGAGCGCTATGGGCCTGCCCCATGGACAAATACATCCACAAGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GCCCTTTTTCTGGGGCTCCGTATTCCCAGACCCTCCCAGAGAAAGACAGACCCAGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: ALFLGLRIPRPSQRKTDPAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...TGGGTCTGTCTTTCTCTGGGAGGGTCTGGGAATACGGAGCCCCAGAAAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR TCA 90 bp CCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGTCCAGAGGCCACACCTaGATACAGAGGCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: PSRTWAEYRTRFVPHSLGSRGHT*IQRQGT
Trigger: GGTTCCCTGCCTCTGTATTCAGGTGTGGCCTCTGGA...CCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR TCA 90 bp GTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTACATCTGCTGACACGTTaGGCCAGGGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VPSRTWAEYRTRFVPHSLHLLTR*ARAGQA
Trigger: TGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATG...TAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: VVEFLLVPGLSIGPDSYLGRRGL*WVVCAL
Trigger: GAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCC...GAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CTCCGAGCTGTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATGGGAACAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRAVHLNTEVRVAFQQWEQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...TTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAACAGCTCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR GCA 90 bp GTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCCATCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: VAFQQWELENLVHSDVLPSSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...TGGGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR GCA 90 bp TCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SAGSAVAVGRLARGSGVRTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...GCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp AACAGTAGCACATCGTCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCCCCTCGTGGAGGCTTTaGTGGGTAGTGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: NSSTSSLRGPRESAHKHSPSWRL*WVVKYS
Trigger: GCTGTACTTCACTACCCAGCAAAGCCTCCACGAGGG...GGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTACTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GCTTGTGGATGTATTTGTCCATGGGGCAGGCCCATAGCGCTCCCAAGTCATCGTCGGAGGGGGCTGTGCTaGGTAGTTTGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: ACGCICPWGRPIALPSHRRRGLC*VVCALS
Trigger: AGAGAGTGCACAAACTACCCAGCACAGCCCCCTCCG...ACGATGACTTGGGAGCGCTATGGGCCTGCCCCATGGACAAATACATCCACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGTGGGTGGCAGGGGCTaGAATCCCTCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPVGGRG*NPSSAS
Trigger: GGAGGCTGAAGAGGGATTCCAGCCCCTGCCACCCAC...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp TCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SRTWAEYRTRFVPHSLGQQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...CTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp TCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCAGTCGGTCTCCTTCTaGCACCTCAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SRTWAEYRTRFVPHSLGQQSVSF*HLSTSS
Trigger: AGAGCTGGTGCTGAGGTGCCAGAAGGAGACCGACTG...CTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGCTTGCCAGAGGTTCTaGTGTGCGCGGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQVFACQRF*CARGSS
Trigger: GGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGC...AAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp TCCAACAGTAGCACATCGTCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACAGGAAGTCTGGCAGTTaGGAGGGCAGTGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: SNSSTSSLRGPRESAHKHRKSGS*EGSVKT
Trigger: CGTCTTCACACTGCCCTCCCAACTGCCAGACTTCCT...GTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGACGATGTGCTACTGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GAGACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGTAGCTATCCAGGGCTaGCTGAAGGGCCCGGGACAC +
Preference number: 4 (lower is better)
Translates to: ETFRTRCTLSPSADTLSQVAIQG*LKGPGH
Trigger: GTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC...CTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp ACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGTCCAAGCCCAGAATTTaGTGGCACCCCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TRFVPHSLGQPRSSHIPQSKPRI*WHPRGG
Trigger: GCCGCCTCTGGGGTGCCACCAAATTCTGGGCTTGGA...CTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAATCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp CCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: PSRTWAEYRTRFVPHSLGAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...CCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR TCA 90 bp CACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACAGACTGACAGCCACCCTTTCGCGTaGTCCTTTTTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSLGQPRSSHIPQSPQTDSHPFA*SFLRRR
Trigger: CCTCCTTCTCAAAAAGGATCACGCGAAAGGGTGGCT...GTCAGTCTGTGGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR GCA 90 bp CTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATCAGGCATCTTCTAGGTaGCAGGTGGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLCVVEFLLVPGLSIGPDQASSR*QVAPRP
Trigger: AGGCCTGGGTGCCACCTGGCACCTAGAAGATGCCTG...ATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp CAGCTTCTCCGAGCTGTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: QLLRAVHLNTEVRVAFQQWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...TTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAACAGCTCGGAGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR GCA 90 bp CATCGTCCCATAGCTGCAGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTTCTTCCCAGTGCCCATaGACGGCCAAGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: HRPIAADTGLTAGLVVSTSSQCP*TAKWTA
Trigger: GGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAGA...AGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCTGCAGCTATGGGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR GCA 90 bp GGCAGGCAGAGTATGTCACCCAGAGGCGGCAGGAGAGGCCCTTTTTCTGGGGCTACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GRQSMSPRGGRRGPFSGATFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...AGCCCCAGAAAAAGGGCCTCTCCTGCCGCCTCTGGGTGACATACTCTGCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR GCA 90 bp AATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: NGNSRTLSTVTFSQESGGRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...CCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR GCA 90 bp ATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: IRTSLPRAASKQSYTTEPRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR GCA 90 bp ACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACAGACTGTCACAGGATGACTTaGTCACCATGCACGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSLPRAASKQSYTTEPTDCHRMT*SPCTAK
Trigger: CTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACA...GTCTGTGGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS-3UTR CCA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGCGGAGGGGGCTGTGCTaGGTAGTTTGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGRRGLC*VVCALS
Trigger: AGAGAGTGCACAAACTACCCAGCACAGCCCCCTCCG...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTGAGAGGCCCTTTTTCTaGGGCTCCGTATTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AEYRTRFVPHSLGQPRSSERPFF*GSVFPD
Trigger: GTCTGGGAATACGGAGCCCCAGAAAAAGGGCCTCTC...ACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR CCA 90 bp CTGAATACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGCCATGCACGGCCAAGTaGACAGCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LNTEAGNQVCVVQGNDLRPCTAK*TATRRQ
Trigger: CTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGG...CCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGTATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: PSRTWAEYRTRFVPHSLGKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...CCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAATTTTCCCGTAGCTATCCAGGGCTaGCTGAAGGGCCCGGGACAC +
Preference number: 4 (lower is better)
Translates to: GTRSVWFKVMICGPVNFPVAIQG*LKGPGH
Trigger: GTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC...GGGAAAATTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR CCA 90 bp AGGGTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCGGCATCGGCCTACAGTaGGAATGGACTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RVAFQQWELENLVHSDVLGIGLQ*EWTWEG
Trigger: CCCTTCCCAAGTCCATTCCCACTGTAGGCCGATGCC...GAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR CAA 72 bp TGCTGCTCCTCAGAGACATTCAGAACCAGATGCACGTaGTCACCATCTGCTGACACGTTGAGCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CCSSETFRTRCT*SPSADTLSQGR
Trigger: CCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGTCTCTGAGGAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR TCA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR TCA 90 bp CAGCTTCTCCGAGCTGTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAAGAACCTTGTCCACAGTaGCGTTCTCCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QLLRAVHLNTEVRVAFQQEPCPQ*RSPRKA
Trigger: CGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTC...TTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAACAGCTCGGAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR GCA 90 bp TCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTGGGTTCCAAGGCACAGAGTGCTGGGTAGTTTGTaGACTCTCTGTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SWRLCWVVKYSHWVPRHRVLGSL*TLCPGS
Trigger: ACTCCCAGGACAGAGAGTGCACAAACTACCCAGCAC...TCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp CTGAATACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: LNTEAGNQVCVVQGNDLRWASAQ*QGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCA...CCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGTATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412901.5
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp ACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: TFRTRCTLSPSADTLSQGRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...GCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTACAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: VPSRTWAEYRTRFVPHSLQRKDH*ASAQCQ
Trigger: TTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTG...TAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp CACTCCCTAGGGCAGCCTCGAAGCAGTCATATACCACAGAGCCCACAGACTGACGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: HSLGQPRSSHIPQSPQTDVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...GTCAGTCTGTGGGCTCTGTGGTATATGACTGCTTCGAGGCTGCCCTAGGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGTGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: VWFKVMICGPVRFLCHRGVKYSH*VPRHRG
Trigger: CCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCAC...ACCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATGGGAACTCGAGAACGGCATCGGCCTACAGTaGGAATGGACTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VHLNTEVRVAFQQWELENGIGLQ*EWTWEG
Trigger: CCCTTCCCAAGTCCATTCCCACTGTAGGCCGATGCC...GTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR TCA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAAGGGAGAGGCCGAAGTaGTGCTCCTCAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: VPSRTWAEYRTRFVPHSLRERPK*CSSETF
Trigger: GAATGTCTCTGAGGAGCAGCACTTCGGCCTCTCCCT...TAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTCGGAGGGGGCTGTGCTaGGTAGTTTGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQVFRRGLC*VVCALS
Trigger: AGAGAGTGCACAAACTACCCAGCACAGCCCCCTCCG...AAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp CTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATAAGGAGAGCACGACTTaGGCCTGGAGAGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: LLCVVEFLLVPGLSIGPDKESTT*AWREAF
Trigger: GAATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTT...ATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGCAGGCAGCTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: GRQLLCVVEFLLVPGLSIVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...TATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAGCTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTGTTCCTTCTCGTACCTaGGCTGAGTATAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: AEYRTRFVPHSLGQPRSSVPSRT*AEYRTR
Trigger: TCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC...ACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGATGTATTTGTCCATaGGGCAGGCCCATAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPGCICP*GRPIAL
Trigger: GAGCGCTATGGGCCTGCCCCATGGACAAATACATCC...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp CTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATAGGAAGTCTGGCAGTTaGGAGGGCAGTGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: LLCVVEFLLVPGLSIGPDRKSGS*EGSVKT
Trigger: CGTCTTCACACTGCCCTCCCAACTGCCAGACTTCCT...ATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CCA 90 bp GGGTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCGGATCCTCTCTGATATaGCACTGCGTCCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: GWPFSNGNSRTLSTVTFSGSSLI*HCVLCT
Trigger: TGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCC...GGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
3UTR CAA 72 bp TCTTCAAGGATCCTCTCTGATATGGCACTGCGTCCTTaGCACAGGCATCGGCCTACAGTGGGAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: SSRILSDMALRP*HRHRPTVGMDL
Trigger: CAAGTCCATTCCCACTGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCATATCAGAGAGGATCCTTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS-3UTR TCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAATTTTCCGCTGCTGTGTGTGGTTaGGTTCCTTCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQFSAAVCG*VPSRTW
Trigger: CCAGGTACGAGAAGGAACTCAACCACACACAGCAGC...GGAAAATTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGTGCTGGGTAGTTTGTaGACTCTCTGTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPVLGSL*TLCPGS
Trigger: ACTCCCAGGACAGAGAGTGCACAAACTACCCAGCAC...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCGTGCTGGGTAGTTTGTaGACTCTCTGTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VVEFLLVPGLSIGPDSYLVLGSL*TLCPGS
Trigger: ACTCCCAGGACAGAGAGTGCACAAACTACCCAGCAC...GAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CCA 90 bp AATGGGAACTCGAGAACCTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 4 (lower is better)
Translates to: NGNSRTLSTVTFSQESGGGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...CCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAATTTTCCGTGCTGGGTAGTTTGTaGACTCTCTGTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQFSVLGSL*TLCPGS
Trigger: ACTCCCAGGACAGAGAGTGCACAAACTACCCAGCAC...GGAAAATTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR GCA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGAGACACTGGCCTGACTaGAGGTCTTGTAGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGRHWPD*RSCSKY
Trigger: GTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCT...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp CAGCTTCTCCGAGCTGTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAACAATTTTCCCTTGCTTaGGGTGAGTCCTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QLLRAVHLNTEVRVAFQQQFSLA*GESSSR
Trigger: CCTTGAAGAGGACTCACCCCAAGCAAGGGAAAATTG...TTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAACAGCTCGGAGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR CCA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 4 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CCA 90 bp GTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGAACCAGGTCTGTGTaGTTCAAGGTAATGATCTGC +
Preference number: 4 (lower is better)
Translates to: VPSRTWAEYRTRFVPHSLGTRSV*FKVMIC
Trigger: GCAGATCATTACCTTGAACCACACAGACCTGGTTCC...TAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR GCA 90 bp GTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VCVVQGNDLRSSQVFVPPTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...CGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGTTTCAAGGTAATGATCTaGGGTCCAGTCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: VWFKVMICGPVRFLCHRGFKVMI*GPVRFL
Trigger: CAAAAACCTGACTGGACCGCAGATCATTACCTTGAA...ACCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp ACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCTTCAAGGTAATGATCTaGGGTCCAGTCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TFRTRCTLSPSADTLSQGFKVMI*GPVRFL
Trigger: CAAAAACCTGACTGGACCGCAGATCATTACCTTGAA...GCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp GGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTACATTCAGAACCAGATaGACGTTGTCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GNQVCVVQGNDLRSSQVFTFRTR*TLSPSA
Trigger: AGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT...AAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR GCA 90 bp CTGAATACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTTCAAGGTAATGATCTaGGGTCCAGTCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LNTEAGNQVCVVQGNDLRFKVMI*GPVRFL
Trigger: CAAAAACCTGACTGGACCGCAGATCATTACCTTGAA...CCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGTATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
CDS TCA 90 bp CGACGCCAGGGCGCCCACCAGGCGCTCGAAACCCGAGTCATCGGCTaGGTAGAGGAGCAGAGCCGCGCGGCCCCTGGCGGCCGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RRQGAHQALETRVIG*VEEQSRAAPGGRCR
Trigger: CCGGCAGCGGCCGCCAGGGGCCGCGCGGCTCTGCTCCTCTACTCAGCCGATGACTCGGGTTTCGAGCGCCTGGTGGGCGCCCTGGCGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483582.5
CDS-3UTR CAA 90 bp AGGCGTCGTGCGGGCCGTGCGCCCCGGGCCCGGACACCCCATCCTGTAGCCACTTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RRRAGRAPRARTPHPVATLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...AGTGGCTACAGGATGGGGTGTCCGGGCCCGGGGCGCACGGCCCGCACGACGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GARQHSAASAGSEHGASSPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...GCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAGCTGGCACAGGGCCGACCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RRLHRSTATRSGSWHRADPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...GTCGGCCCTGTGCCAGCTGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGGAGCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ARTPHPVATRCTAPPHREPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...CTCCCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
CDS TCA 90 bp CCCCAGAGGCGGCAGGAGAGGCCCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACTGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: PQRRQERPGEQWVAS*GPTSLSRERTTGLR
Trigger: CCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGGGCCTCTCCTGCCGCCTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469686.5
ENST00000481032.1
ENST00000497102.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TCTCTCTTGGAGCCGCCCGGAACGCGGGGCGCGAGGCTGCTGCAGGGCCCCCAGAGTAGCACATCGTCTTaGAGAGGCCCCAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SLLEPPGTRGARLLQGPQSSTSS*RGPRES
Trigger: TGACTCCCTGGGGCCTCTCAAAGACGATGTGCTACT...CTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp GCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCGCACAGAGGGATCTGTaGTCCTGGGGGCCTCGTGTC +
Preference number: 5 (lower is better)
Translates to: AVAVGRLARGSGVRGGPPAQRDL*SWGPRV
Trigger: GACACGAGGCCCCCAGGACAACAGATCCCTCTGTGC...GGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp GCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCACGCTTGTGGATGTATTaGTCCATGGGGCAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: AGRGPHPEPASTVPLLRARLWMY*SMGQAH
Trigger: ATGGGCCTGCCCCATGGACAAATACATCCACAAGCG...TGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RCVQQPALQGQQLQSGGLPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...CAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000498214.6
CDS TCA 90 bp TCCCAGAGGCGGCAGGAGAGGCCCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACTGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SQRRQERPGEQWVAS*GPTSLSRERTTGLR
Trigger: CCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGGGCCTCTCCTGCCGCCTCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000413608.2
ENST00000416074.6
ENST00000424206.5
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000440502.5
ENST00000451231.5
ENST00000455057.5
ENST00000466046.5
ENST00000483582.5
ENST00000490512.5
ENST00000494365.5
CDS TCA 90 bp ACCCAGAGGCGGCAGGAGAGGCCCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACTGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: TQRRQERPGEQWVAS*GPTSLSRERTTGLR
Trigger: CCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGGGCCTCTCCTGCCGCCTCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR CAA 90 bp GTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCCCATCTGCTGACACGTaGAGCCAGGGCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VKPSHGPLRAQFTTAPQVPSADT*SQGRAQ
Trigger: CTGGGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...GACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR CAA 90 bp GCTGGCAGGGGTCCCCACCCGGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: AGRGPHPEPASTVPLLRARTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...TGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCCGGGTGGGGACCCCTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RCVQQPALQGQQLQSGGLLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...CAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: VRPAASSAGSAVAVGRLALQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...GGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTGCACAGAGGGATCTGTaGTCCTGGGGGCCTCGTGTC +
Preference number: 5 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGAQRDL*SWGPRV
Trigger: GACACGAGGCCCCCAGGACAACAGATCCCTCTGTGC...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp GGAGCCCGCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCCGCTTGTGGATGTATTaGTCCATGGGGCAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: GARQHSAASAGSEHGASSRLWMY*SMGQAH
Trigger: ATGGGCCTGCCCCATGGACAAATACATCCACAAGCG...GCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGCGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: VKPSHGPLRAQFTTAPQVKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...GACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp AAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTTTGCTCCGCTCTCTCTaGGAGCCGCCCGGAACGCGG +
Preference number: 5 (lower is better)
Translates to: KLHKGSRHLHLQQDAAGSLLRSL*EPPGTR
Trigger: CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAA...ACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: DQTAQGQQALAPPAGRSGKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...CCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GCCAGCACAGTGCCGCTTCTGCGGGCAGCGAGCACGGTGCGTCCAGCAGCCAGCAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: ASTVPLLRAASTVRPAASSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...GCTGGCTGCTGGACGCACCGTGCTCGCTGCCCGCAGAAGCGGCACTGTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCTACGGCCACGCGCAGCGGCAACGAGGGCCCAGCGCTaGTGGATGTATTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: PARSVHDGSTGLRPRAAATRAQR*WMYLSM
Trigger: CATGGACAAATACATCCACAAGCGCTGGGCCCTCGT...TGCCGCTGCGCGTGGCCGTAGACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TTGTCACCATCTGCTGACACGTTGAGCCAGGGCAGGGCAGGCAGCTGCTGTGTGTTGCTCCGCTCTCTCTaGGAGCCGCCCGGAACGCGG +
Preference number: 5 (lower is better)
Translates to: LSPSADTLSQGRAGSCCVLLRSL*EPPGTR
Trigger: CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAA...CACACAGCAGCTGCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGGTGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCAAGGGCCCGGGACACTaGCTCCGCTCTCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SAGSAVAVGRLARGSGVRKGPGH*LRSLLE
Trigger: CTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTT...GCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CGGGCCCGGACACCCCATCCTGTAGCCACTCGCTGCACAGCGCCACCGCACCGGCCAGTCAATTTTCCCTaGCTTGGGGTGAGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RARTPHPVATRCTAPPHRPVNFP*LGVSPL
Trigger: AAGAGGACTCACCCCAAGCAAGGGAAAATTGACTGG...CCGGTGCGGTGGCGCTGTGCAGCGAGTGGCTACAGGATGGGGTGTCCGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS TCA 90 bp TCTCCCCAGGGTTCCAGACTCACCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACTGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SPQGSRLTGEQWVAS*GPTSLSRERTTGLR
Trigger: CCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGGTGAGTCTGGAACCCTGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295981.7
CDS GCA 90 bp GGGCTGGAATCCCTCTTCAGCCTCCAGAGGGGGCGGAGGGGGCTGTaGTGGGTAGTTTGTGCACTCTCTGTCCTGGGAGTCCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: GLESLFSLQRGRRGL*WVVCALSVLGVLTL
Trigger: GAGAGTCAGGACTCCCAGGACAGAGAGTGCACAAACTACCCAGCACAGCCCCCTCCGCCCCCTCTGGAGGCTGAAGAGGGATTCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENST00000295981.7
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000416074.6
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000451231.5
ENST00000451271.5
ENST00000466046.5
ENST00000469686.5
ENST00000476810.5
ENST00000481032.1
ENST00000483582.5
ENST00000494365.5
ENST00000497102.5
ENST00000498214.6
CDS CCA 90 bp GGTAGCGTCCTGAGGCCCCACAAGCCTCTCCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAAGGACAGCAAGAACCAGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: GSVLRPHKPLQRKDH*ASAQCQGQQEPGHR
Trigger: CCTGTGCCCTGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000295981.7
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000413608.2
ENST00000416074.6
ENST00000424206.5
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000455057.5
ENST00000466046.5
ENST00000469686.5
ENST00000476810.5
ENST00000481032.1
ENST00000483582.5
ENST00000490512.5
ENST00000494365.5
ENST00000497102.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: FWCARGSSLKGQMFVLTEKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...CTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CTTGTCCACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LVHSDVLPGKRWDQWLAGLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...CCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTGGACAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGGGGAACTCGAGAACCTaGTCCACAGTGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ASSSQLCRVSSCSRAACQGNSRT*STVTFS
Trigger: GGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCC...CTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGTCAGGTAAGGGCCCGGGACACTaGCTCCGCTCTCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CARGSSLKGQMFVLTESGKGPGH*LRSLLE
Trigger: CTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTT...ACCTGACTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGATGGCACTGCGTCCTTaGCACAGGCATCGGCCTACA +
Preference number: 5 (lower is better)
Translates to: CRVSSCSRAACQRFWCARMALRP*HRHRPT
Trigger: TGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCAT...CCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GGGTCAGCAGTTGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: GSAVAVGRLARGSGVRGGSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...ACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CGGTGCGTCCAGCAGCCAGCTCTGCAGGGTCAGCAGTTGCAGTCGGGCGGCTTGAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: RCVQQPALQGQQLQSGGLRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...CAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGGACGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TGCACAGCGCCACCGCACCGGGAGAGAAGAGCAAGACCACCACGCCGCCCTCCTAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: CTAPPHRERRARPPRRPPRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...AGGAGGGCGGCGTGGTGGTCTTGCTCTTCTCTCCCGGTGCGGTGGCGCTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGGAGGCCCTCGTGGAGGCTTaGCTGGGTAGTGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: AIQGWLKGPGHLLRSLLEALVEA*LGSEVQ
Trigger: CTGTACTTCACTACCCAGCAAAGCCTCCACGAGGGC...CTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp GTGAAACCAAGCCACGGGCCCCTGCGCGCTCAGTTCACGACGGCTCCACAGGTCCGCTTGTGGATGTATTaGTCCATGGGGCAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: VKPSHGPLRAQFTTAPQVRLWMY*SMGQAH
Trigger: ATGGGCCTGCCCCATGGACAAATACATCCACAAGCG...GACCTGTGGAGCCGTCGTGAACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CAGAGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCACCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: QSPQTDQTAQGQQALAPPPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...TGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp AAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCCTGTCACAGGATGACTaGCTCACCATGCACGGCCAA +
Preference number: 5 (lower is better)
Translates to: KGSRHLHLQQDAAGSRVGLSQDD*LTMHGQ
Trigger: TTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAG...GCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS GCA 90 bp CCCCACAAGCCTCTCCAGAGAAAGGACCACTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCAGGGCACAGGCATCTTCTAGGTGCC +
Preference number: 5 (lower is better)
Translates to: PHKPLQRKDHWASAQ*QGQQEPGHRHLLGA
Trigger: GGCACCTAGAAGATGCCTGTGCCCTGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000295981.7
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000416074.6
ENST00000424206.5
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000455057.5
ENST00000466046.5
ENST00000469686.5
ENST00000476810.5
ENST00000481032.1
ENST00000483582.5
ENST00000490512.5
ENST00000494365.5
ENST00000497102.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACGCAGCGGGCAGTAGGAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: LHKGSRHLHLQQDAAGSRSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...CCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CACAGTGACGTTCTCCCAGGAAAGCGGTGGGACCAGTGGCTGGCAGGGGTCCCCAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: HSDVLPGKRWDQWLAGVPRTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...GGGGACCCCTGCCAGCCACTGGTCCCACCGCTTTCCTGGGAGAACGTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CTTCCCAGTGCCCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACGCCCTCGTGGAGGCTTaGCTGGGTAGTGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: LPSAHARPSGQPHADRGHALVEA*LGSEVQ
Trigger: CTGTACTTCACTACCCAGCAAAGCCTCCACGAGGGC...GTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCACTGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451271.5
CDS-3UTR CAA 90 bp AGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCTTGCTCCGCTCTCTCTaGGAGCCGCCCGGAACGCGG +
Preference number: 5 (lower is better)
Translates to: RHWPDCRSCSKYSPRRAALLRSL*EPPGTR
Trigger: CCGCGTTCCGGGCGGCTCCAAGAGAGAGCGGAGCAA...GGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp TGCAGTCGGGCGGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGCCAGTCAATTTTCCCTaGCTTGGGGTGAGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: CSRAACQRFWCARGSSLKPVNFP*LGVSPL
Trigger: AAGAGGACTCACCCCAAGCAAGGGAAAATTGACTGG...CTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412901.5
ENST00000498214.6
CDS CCA 90 bp CGTCCCATAGCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGGATCTGTTGTCCTGGGGGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: RPIAWRLCWVVKYSH*VPRHRGICCPGGLV
Trigger: CACGAGGCCCCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGCTATGGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494365.5
CDS-3UTR CAA 90 bp GTGGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTCCTTCTGGCACCTCAGAGACAGACCCAGCTCTaGCCCCTTCCCCGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VDSHTQTEVTVGLLLAPQRQTQL*PLPRSS
Trigger: AGAAGAACGGGGAAGGGGCAAGAGCTGGGTCTGTCT...CTGAGGTGCCAGAAGGAGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR CAA 90 bp GGCTTGCCAGAGGTTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: GLPEVLVCAGVLPEGADVSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...AACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAACCTCTGGCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GTAGCTATCCAGGGCTGGCTGAAGGGCCCGGGACACTTGCTCCGCTCTCTCTTGAGTAGCACATCGTCTTaGAGAGGCCCCAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: VAIQGWLKGPGHLLRSLLSSTSS*RGPRES
Trigger: TGACTCCCTGGGGCCTCTCAAAGACGATGTGCTACT...CAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTTCAGCCAGCCCTGGATAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS GCA 90 bp GGCTCTTCCCAGTGCCGTGTACACATGCACTGTCACAGGATGACTTaGTCACCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: GSSQCRVHMHCHRMT*SPCTAKWTATRRQR
Trigger: CCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTGTACACGGCACTGGGAAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS GCA 90 bp TCTTTGAGAGGCCCCAGGGAGTCAGCCCACAAGCACTCCTGCAGCTaGAGCTTCTCCGAGCTGTTCACCTGCTGGGAAGAGACCATGGTT +
Preference number: 5 (lower is better)
Translates to: SLRGPRESAHKHSCS*SFSELFTCWEETMV
Trigger: AACCATGGTCTCTTCCCAGCAGGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGCTGACTCCCTGGGGCCTCTCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS-3UTR CAA 90 bp AGACACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: RHWPDCRSCSKYSPRRAAKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...GGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp TCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: SRTWAEYRTRFVPHSLGQKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...CTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GGCAGGCAGAGTATGTCACCCAGAGGCGGCAGGAGAGGCCCTTTTTCTGGGGCTAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: GRQSMSPRGGRRGPFSGARTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...AGCCCCAGAAAAAGGGCCTCTCCTGCCGCCTCTGGGTGACATACTCTGCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS-3UTR CAA 90 bp TTCTGGTGTGCGCGGGGGTCCTCCCTGAAGGGGCAGATGTTCGTCCTAACGGAGAGAACCAGATGCACGTaGTCACCATCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: FWCARGSSLKGQMFVLTERTRCT*SPSADT
Trigger: CGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCT...CTCCGTTAGGACGAACATCTGCCCCTTCAGGGAGGACCCCCGCGCACACCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGCCATCTGCTGACACGTaGAGCCAGGGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGPSADT*SQGRAG
Trigger: GCCTGCCCTGCCCTGGCTCAACGTGTCAGCAGATGG...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
CDS TCA 90 bp CTTCAGGCTCTTCCCAGTGCCGTGTACACATGCACTGTCACAGGATaGCTTGCTCACCATGCACGGCCAAGTGGACAGCCACACGCAGAC +
Preference number: 5 (lower is better)
Translates to: LQALPSAVYTCTVTG*LAHHARPSGQPHAD
Trigger: GTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTGTACACGGCACTGGGAAGAGCCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS GCA 90 bp CAGTGCCGTGTACACATGCACTGTCACAGGATGACTTGCTCACCATaGACGGCCAAGTGGACAGCCACACGCAGACAGAGGTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: QCRVHMHCHRMTCSP*TAKWTATRRQRSQS
Trigger: CGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTGTACACGGCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS CCA 90 bp CACATGCACTGTCACAGGATGACTTGCTCACCATGCACGGCCAAGTaGACAGCCACACGCAGACAGAGGTCACAGTCGGTCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HMHCHRMTCSPCTAK*TATRRQRSQSVSFW
Trigger: CCAGAAGGAGACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS-3UTR CAA 90 bp TGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTCAGGTTTTTGTGCCACCGGGGAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: CVVQGNDLRSSQVFVPPGKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...CCCCGGTGGCACAAAAACCTGACTGGACCGCAGATCATTACCTTGAACCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424206.5
ENST00000451231.5
ENST00000451271.5
CDS-3UTR CAA 90 bp ACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTTTGCAGTCGGGCGGCTaGCCAGAGGTTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: TEAGNQVCVVQGNDLRSSLQSGG*PEVLVC
Trigger: GCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAA...ACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412901.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GAGGTTAGGGTGGCCTTTCAGCAATGGGAACTCGAGAACCTTGTCCACAGTGACAAGGGCCCGGGACACTaGCTCCGCTCTCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: EVRVAFQQWELENLVHSDKGPGH*LRSLLE
Trigger: CTCCAAGAGAGAGCGGAGCAAGTGTCCCGGGCCCTT...GTCACTGTGGACAAGGTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498214.6
CDS TCA 90 bp CGGGTGGGAGCTGAAGCTGTTCCAAGCCCAGAATTTGGTGGCACCTaGCATACCCAGAGAGCCAAAGAACTTGGCTGTCCTAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RVGAEAVPSPEFGGT*HTQRAKELGCPRLR
Trigger: CCTCAGCCTAGGACAGCCAAGTTCTTTGGCTCTCTGGGTATGTCAGGTGCCACCAAATTCTGGGCTTGGAACAGCTTCAGCTCCCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469686.5
ENST00000481032.1
CDS GCA 90 bp GCTCCGTATTCCCAGACCCTCCCAGAGAAAGACAGACCCAGCTCTTaGCCCTTCCCCGTTCTTCTCTTCTACCATCAGCACCAGACAGAC +
Preference number: 5 (lower is better)
Translates to: APYSQTLPEKDRPSS*PFPVLLFYHQHQTD
Trigger: GTCTGTCTGGTGCTGATGGTAGAAGAGAAGAACGGGGAAGGGGCAAGAGCTGGGTCTGTCTTTCTCTGGGAGGGTCTGGGAATACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295981.7
ENST00000476810.5
CDS-3UTR CAA 90 bp GTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: VVEFLLVPGLSIGPDSYLKGSRH*HLQQDA
Trigger: TGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTT...GAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTTGCACCTCCAGCAGGACAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: HRLTKLHKGSRHLHLQQDSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...GTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440502.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CACTGGCCTGACTGCAGGTCTTGTAGTAAGTACTCTCCAAGGCGAGCTGCCCTCACGAGGGCCCAGCGCTaGTGGATGTATTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: HWPDCRSCSKYSPRRAALTRAQR*WMYLSM
Trigger: CATGGACAAATACATCCACAAGCGCTGGGCCCTCGT...GAGGGCAGCTCGCCTTGGAGAGTACTTACTACAAGACCTGCAGTCAGGCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451231.5
ENST00000451271.5
CDS GCA 90 bp GACCAGAATGGGGCAGGCAACAGAAGGCCTGTTGGGTTGGGAATCTaGACTCAATCTGACCTGAGGCAGATGTGGATTCAAGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: DQNGAGNRRPVGLGI*TQSDLRQMWIQGWV
Trigger: CACCCAGCCTTGAATCCACATCTGCCTCAGGTCAGATTGAGTGCAGATTCCCAACCCAACAGGCCTTCTGTTGCCTGCCCCATTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS GCA 90 bp GCCCACAAGCACTCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACCTaGTGGGAAGAGACCATGGTTAGGGCCACTAAGAAAAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: AHKHSCSCSFSELFT*WEETMVRATKKSKS
Trigger: GCTTTTGCTTTTCTTAGTGGCCCTAACCATGGTCTCTTCCCAGCAGGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS-3UTR CAA 90 bp ACATTCAGAACCAGATGCACGTTGTCACCATCTGCTGACACGTTGAGCCAGGGCGCTGTGCTGGGTAGTTaGTGCACTCTCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TFRTRCTLSPSADTLSQGAVLGS*CTLCPG
Trigger: CCCAGGACAGAGAGTGCACAAACTACCCAGCACAGC...GCCCTGGCTCAACGTGTCAGCAGATGGTGACAACGTGCATCTGGTTCTGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp ACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTGCGGTCCAGTGCTGTGCTGGGTAGTTaGTGCACTCTCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TEAGNQVCVVQGNDLRSSAVLGS*CTLCPG
Trigger: CCCAGGACAGAGAGTGCACAAACTACCCAGCACAGC...ACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412901.5
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GAGTATAGGACCAGATTCGTACCTCACTCCCTAGGGCAGCCTCGAAGCAGTCATGCTGTGCTGGGTAGTTaGTGCACTCTCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: EYRTRFVPHSLGQPRSSHAVLGS*CTLCPG
Trigger: CCCAGGACAGAGAGTGCACAAACTACCCAGCACAGC...ATGACTGCTTCGAGGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATGGGAACTCGAGAACGCTGTGCTGGGTAGTTaGTGCACTCTCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VHLNTEVRVAFQQWELENAVLGS*CTLCPG
Trigger: CCCAGGACAGAGAGTGCACAAACTACCCAGCACAGC...GTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR CAA 90 bp GTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATTCGTACCTCACTCCCTAGCTGTGCTGGGTAGTTaGTGCACTCTCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VPSRTWAEYRTRFVPHSLAVLGS*CTLCPG
Trigger: CCCAGGACAGAGAGTGCACAAACTACCCAGCACAGC...TAGGGAGTGAGGTACGAATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GGCAGGCAGCTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: GRQLLCVVEFLLVPGLSISCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...TATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp GCTTGTGGATGTATTTGTCCATGGGGCAGGCCCATAGCGCTCCCAAGTCATCGTAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: ACGCICPWGRPIALPSHRSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...ACGATGACTTGGGAGCGCTATGGGCCTGCCCCATGGACAAATACATCCACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CAGCTTCTCCGAGCTGTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAAGGGAACTCGAGAACCTaGTCCACAGTGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QLLRAVHLNTEVRVAFQQGNSRT*STVTFS
Trigger: GGAGAACGTCACTGTGGACAAGGTTCTCGAGTTCCC...TTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAACAGCTCGGAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS-3UTR CAA 90 bp GTTCACCTGAACACAGAGGTTAGGGTGGCCTTTCAGCAATGGGAACTCGAGAACATGGCACTGCGTCCTTaGCACAGGCATCGGCCTACA +
Preference number: 5 (lower is better)
Translates to: VHLNTEVRVAFQQWELENMALRP*HRHRPT
Trigger: TGTAGGCCGATGCCTGTGCAAAGGACGCAGTGCCAT...GTTCTCGAGTTCCCATTGCTGAAAGGCCACCCTAACCTCTGTGTTCAGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412901.5
CDS CCA 90 bp CACAAGCACTCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACCTGCTaGGAAGAGACCATGGTTAGGGCCACTAAGAAAAGCAAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: HKHSCSCSFSELFTC*EETMVRATKKSKSQ
Trigger: TTGGCTTTTGCTTTTCTTAGTGGCCCTAACCATGGTCTCTTCCCAGCAGGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS-3UTR CAA 90 bp AGGCAGCTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGAAGCTGCTGTGTGTGGTaGAGTTCCTTCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: RQLLCVVEFLLVPGLSIGSCCVW*SSFSYL
Trigger: CAGGTACGAGAAGGAACTCAACCACACACAGCAGCT...TCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424206.5
ENST00000434756.5
ENST00000451231.5
ENST00000451271.5
ENST00000476810.5
ENST00000498214.6
CDS-3UTR CAA 90 bp CTGCTGTGTGTGGTTGAGTTCCTTCTCGTACCTGGGCTGAGTATAGGACCAGATACGAGGGCCCAGCGCTaGTGGATGTATTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: LLCVVEFLLVPGLSIGPDTRAQR*WMYLSM
Trigger: CATGGACAAATACATCCACAAGCGCTGGGCCCTCGT...ATCTGGTCCTATACTCAGCCCAGGTACGAGAAGGAACTCAACCACACACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451231.5
ENST00000451271.5
ENST00000498214.6
CDS CCA 90 bp AGGAAACCAGGAAGGCAGAAGTTCCCCCACCAATTTTCCCTTGCTTaGGGTGAGTCCTCTTCAAGGATCCTCTCTGATATGGCACTGCGT +
Preference number: 5 (lower is better)
Translates to: RKPGRQKFPHQFSLA*GESSSRILSDMALR
Trigger: ACGCAGTGCCATATCAGAGAGGATCCTTGAAGAGGACTCACCCCAAGCAAGGGAAAATTGGTGGGGGAACTTCTGCCTTCCTGGTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000464406.5
ENST00000466046.5
ENST00000478206.1
ENST00000490512.5
ENST00000494365.5
CDS CCA 90 bp AATCCAGGGCACCAGCCAGGTGTTCCAATATTCACCAAGCTCTGGTaGCCTGATCTCCAAATTCCCAGCATCAACTATGCATATCTCCCG +
Preference number: 5 (lower is better)
Translates to: NPGHQPGVPIFTKLW*PDLQIPSINYAYLP
Trigger: CGGGAGATATGCATAGTTGATGCTGGGAATTTGGAGATCAGGCCACCAGAGCTTGGTGAATATTGGAACACCTGGCTGGTGCCCTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466712.1
CDS CCA 90 bp CCAAATCCAGGGCACCAGCCAGGTGTTCCAATATTCACCAAGCTCTaGTGGCCTGATCTCCAAATTCCCAGCATCAACTATGCATATCTC +
Preference number: 5 (lower is better)
Translates to: PNPGHQPGVPIFTKL*WPDLQIPSINYAYL
Trigger: GAGATATGCATAGTTGATGCTGGGAATTTGGAGATCAGGCCACCAGAGCTTGGTGAATATTGGAACACCTGGCTGGTGCCCTGGATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466712.1
CDS GCA 90 bp ATACAGAGGCAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTaGGGTCCAGTCTGTGGAACAAATAAAGGAAGGAGGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IQRQGTRSVWFKVMI*GPVCGTNKGRRLEK
Trigger: CTTCTCCAACCTCCTTCCTTTATTTGTTCCACAGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTGCCTCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464406.5
ENST00000466046.5
ENST00000494365.5
CDS CCA 90 bp CCTGTTGGGTTGGGAATCTGCACTCAATCTGACCTGAGGCAGATGTaGATTCAAGGCTGGGTGATTAGGAATCACTACATCTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PVGLGICTQSDLRQM*IQGWVIRNHYIFLC
Trigger: GCAGAGAAAGATGTAGTGATTCCTAATCACCCAGCCTTGAATCCACATCTGCCTCAGGTCAGATTGAGTGCAGATTCCCAACCCAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CCA 90 bp AAAGCGTCTTCTGACCCTAAAGCTGTTTTTATGTCTTACGGAGCATaGTTCCCCTCTCATCTAACCTTCTCAAAGAGATTCCTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: KASSDPKAVFMSYGA*FPSHLTFSKRFLSH
Trigger: GTGAGAAAGGAATCTCTTTGAGAAGGTTAGATGAGAGGGGAACCATGCTCCGTAAGACATAAAAACAGCTTTAGGGTCAGAAGACGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS TCA 72 bp CGGCAGGAGAGGCCCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACT +
Preference number: 6 (lower is better)
Translates to: RQERPGEQWVAS*GPTSLSRERTT
Trigger: AGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGGGCCTCTCCTGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000413608.2
ENST00000416074.6
ENST00000424206.5
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000455057.5
ENST00000466046.5
ENST00000469686.5
ENST00000481032.1
ENST00000483582.5
ENST00000490512.5
ENST00000494365.5
ENST00000497102.5
ENST00000498214.6
CDS CAA 72 bp GCGGGCAGTAGGGTAGGCCTGGAAGGAGAGCACGACTaGGGCCTGGAGAGAGGCATGCACGGCCAAGTGGAC +
Preference number: 6 (lower is better)
Translates to: AGSRVGLEGEHD*GLERGMHGQVD
Trigger: GTCCACTTGGCCGTGCATGCCTCTCTCCAGGCCCAAGTCGTGCTCTCCTTCCAGGCCTACCCTACTGCCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412901.5
ENST00000436503.5
ENST00000438091.5
ENST00000490512.5
CDS CCA 72 bp TGGCGGTGCAGGGCTCAGAATCCAGGCCAAGGGCTGTaGGATCATCTGCAGGGACCACTCTGCTCACTGCCC +
Preference number: 6 (lower is better)
Translates to: WRCRAQNPGQGL*DHLQGPLCSLP
Trigger: GGGCAGTGAGCAGAGTGGTCCCTGCAGATGATCCCACAGCCCTTGGCCTGGATTCTGAGCCCTGCACCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478206.1
CDS CAA 90 bp CACAGAGCCCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCCATGCA +
Preference number: 6 (lower is better)
Translates to: HRAHRLTKLHKGSRH*HLQQDAAGSRVGHA
Trigger: TGCATGGCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGGGCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451231.5
CDS CAA 90 bp GTACCTGGGCACAGACTGACCAAACTGCACAAGGGCAGCAGGCACTaGCACCTCCAGCAGGACGCAGCGGGCAGTAGGGTAGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: VPGHRLTKLHKGSRH*HLQQDAAGSRVGLE
Trigger: TTCCAGGCCTACCCTACTGCCCGCTGCGTCCTGCTGGAGGTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGTGCCCAGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451165.6
CDS TCA 72 bp GGTTCCAGACTCACCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACT +
Preference number: 6 (lower is better)
Translates to: GSRLTGEQWVAS*GPTSLSRERTT
Trigger: AGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGGTGAGTCTGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295981.7
CDS TCA 72 bp CAGACAGGGCAGTTCGGAGAGCAGTGGGTAGCGTCCTaGGGCCCCACAAGCCTCTCCAGAGAAAGGACCACT +
Preference number: 6 (lower is better)
Translates to: QTGQFGEQWVAS*GPTSLSRERTT
Trigger: AGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAGGACGCTACCCACTGCTCTCCGAACTGCCCTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476810.5
CDS GCA 72 bp GGGAGTCCTGACTCTCCTCCTACTTCCAGCACGGAGTaGTTTCGTTTTGGCTCCCGGCAGGCTGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: GSPDSPPTSSTE*FRFGSRQAAGC
Trigger: ACAGCCAGCAGCCTGCCGGGAGCCAAAACGAAAGCACTCCGTGCTGGAAGTAGGAGGAGAGTCAGGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383812.9
ENST00000416074.6
CDS CCA 72 bp CTGAGGCCCCACAAGCCTCTCCAGAGAAAGGACCACTaGGCTTCGGCCCAGTGCCAAGGACAGCAAGAACCA +
Preference number: 6 (lower is better)
Translates to: LRPHKPLQRKDH*ASAQCQGQQEP
Trigger: TGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTGGAGAGGCTTGTGGGGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000295981.7
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000413608.2
ENST00000416074.6
ENST00000424206.5
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000455057.5
ENST00000466046.5
ENST00000469686.5
ENST00000476810.5
ENST00000481032.1
ENST00000483582.5
ENST00000490512.5
ENST00000494365.5
ENST00000497102.5
ENST00000498214.6
CDS GCA 72 bp CCTCTCCAGAGAAAGGACCACTGGGCTTCGGCCCAGTaGCAAGGACAGCAAGAACCAGGGCACAGGCATCTT +
Preference number: 6 (lower is better)
Translates to: PLQRKDHWASAQ*QGQQEPGHRHL
Trigger: AAGATGCCTGTGCCCTGGTTCTTGCTGTCCTTGGCACTGGGCCGAAGCCCAGTGGTCCTTTCTCTGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000295981.7
ENST00000383812.9
ENST00000403601.8
ENST00000412901.5
ENST00000416074.6
ENST00000424206.5
ENST00000434756.5
ENST00000436503.5
ENST00000438091.5
ENST00000440502.5
ENST00000451231.5
ENST00000451271.5
ENST00000455057.5
ENST00000466046.5
ENST00000469686.5
ENST00000476810.5
ENST00000481032.1
ENST00000483582.5
ENST00000490512.5
ENST00000494365.5
ENST00000497102.5
ENST00000498214.6
CDS CAA 90 bp AGGCTCTTCCCAGTGCCGTGTACACATGCACTGTCACAGGATGACTaGCTCACCATGCACGGCCAAGTGGACAGCCACACGCAGACAGAG +
Preference number: 6 (lower is better)
Translates to: RLFPVPCTHALSQDD*LTMHGQVDSHTQTE
Trigger: CTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTGTACACGGCACTGGGAAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS GCA 72 bp CAGTGCCGTGTACACATGCACTGTCACAGGATGACTTaGTCACCATGCACGGCCAAGTGGACAGCCACACGC +
Preference number: 6 (lower is better)
Translates to: QCRVHMHCHRMT*SPCTAKWTATR
Trigger: GCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTGTACACGGCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS CCA 72 bp AGCAGTCATATACCACAGAGCCCATGCACGGCCAAGTaGACAGCCACACGCAGACAGAGGTCACAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: SSHIPQSPCTAK*TATRRQRSQSV
Trigger: GACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGGCTCTGTGGTATATGACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434756.5
CDS CCA 72 bp TGTCACAGGATGACTTGCTCACCATGCACGGCCAAGTaGACAGCCACACGCAGACAGAGGTCACAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: CHRMTCSPCTAK*TATRRQRSQSV
Trigger: GACCGACTGTGACCTCTGTCTGCGTGTGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS CCA 72 bp GCGTGGAGGCTTTGCTGGGTAGTGAAGTACAGCCACTaGGTTCCAAGGCACAGAGGGATCTGTTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: AWRLCWVVKYSH*VPRHRGICCPG
Trigger: CCCAGGACAACAGATCCCTCTGTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494365.5
CDS TCA 72 bp CTTCCCAGTGCCGTGTACACATGCACTGTCACAGGATaGCTTGCTCACCATGCACGGCCAAGTGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: LPSAVYTCTVTG*LAHHARPSGQP
Trigger: TGGCTGTCCACTTGGCCGTGCATGGTGAGCAAGTCATCCTGTGACAGTGCATGTGTACACGGCACTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440502.5
CDS CCA 72 bp CTCCCAAGTCATCGTCCCATAGCGTGGAGGCTTTGCTaGGTAGTGAAGTACAGCCACTGGGTTCCAAGGCAC +
Preference number: 6 (lower is better)
Translates to: LPSHRPIAWRLC*VVKYSHWVPRH
Trigger: GTGCCTTGGAACCCAGTGGCTGTACTTCACTACCCAGCAAAGCCTCCACGCTATGGGACGATGACTTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494365.5
CDS GCA 72 bp CACTCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACCTaGTGGGAAGAGACCATGGTTAGGGCCACTAAGAAA +
Preference number: 6 (lower is better)
Translates to: HSCSCSFSELFT*WEETMVRATKK
Trigger: TTTCTTAGTGGCCCTAACCATGGTCTCTTCCCAGCAGGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CCA 72 bp TCCTGCAGCTGCAGCTTCTCCGAGCTGTTCACCTGCTaGGAAGAGACCATGGTTAGGGCCACTAAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: SCSCSFSELFTC*EETMVRATKKS
Trigger: GCTTTTCTTAGTGGCCCTAACCATGGTCTCTTCCCAGCAGGTGAACAGCTCGGAGAAGCTGCAGCTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CAA 72 bp GACCAGAATGGGGCAGGCAACAGAAGGCCTGTTGGGTaGGGAATCTGCACTCAATCTGACCTGAGGCAGATG +
Preference number: 6 (lower is better)
Translates to: DQNGAGNRRPVG*GICTQSDLRQM
Trigger: CATCTGCCTCAGGTCAGATTGAGTGCAGATTCCCAACCCAACAGGCCTTCTGTTGCCTGCCCCATTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS GCA 72 bp GGGGCAGGCAACAGAAGGCCTGTTGGGTTGGGAATCTaGACTCAATCTGACCTGAGGCAGATGTGGATTCAA +
Preference number: 6 (lower is better)
Translates to: GAGNRRPVGLGI*TQSDLRQMWIQ
Trigger: TTGAATCCACATCTGCCTCAGGTCAGATTGAGTGCAGATTCCCAACCCAACAGGCCTTCTGTTGCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS TCA 72 bp CAGAAGGCCTGTTGGGTTGGGAATCTGCACTCAATCTaGCCTGAGGCAGATGTGGATTCAAGGCTGGGTGAT +
Preference number: 6 (lower is better)
Translates to: QKACWVGNLHSI*PEADVDSRLGD
Trigger: ATCACCCAGCCTTGAATCCACATCTGCCTCAGGTCAGATTGAGTGCAGATTCCCAACCCAACAGGCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CCA 72 bp GCTTCTCCGAGCTGTTCACCTGCTGGGAAGAGACCATaGTTAGGGCCACTAAGAAAAGCAAAAGCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: ASPSCSPAGKRP*LGPLRKAKAKG
Trigger: GCCTTTGGCTTTTGCTTTTCTTAGTGGCCCTAACCATGGTCTCTTCCCAGCAGGTGAACAGCTCGGAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CAA 90 bp AGGCAGAAAGACCAGAATGGGGCAGGCAACAGAAGGCCTGTTGGGTaGGGAATCTGCACTCAATCTGACCTGAGGCAGATGTGGATTCAA +
Preference number: 6 (lower is better)
Translates to: RQKDQNGAGNRRPVG*GICTQSDLRQMWIQ
Trigger: TTGAATCCACATCTGCCTCAGGTCAGATTGAGTGCAGATTCCCAACCCAACAGGCCTTCTGTTGCCTGCCCCATTCTGGTCTTTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CCA 72 bp GGAAGGCAGAAGTTCCCCCACCAATTTTCCCTTGCTTaGGGTGAGTCCTCTTCAAGGATCCTCTCTGATATG +
Preference number: 6 (lower is better)
Translates to: GRQKFPHQFSLA*GESSSRILSDM
Trigger: CATATCAGAGAGGATCCTTGAAGAGGACTCACCCCAAGCAAGGGAAAATTGGTGGGGGAACTTCTGCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000464406.5
ENST00000466046.5
ENST00000478206.1
ENST00000490512.5
ENST00000494365.5
CDS CCA 72 bp GGGCACCAGCCAGGTGTTCCAATATTCACCAAGCTCTaGTGGCCTGATCTCCAAATTCCCAGCATCAACTAT +
Preference number: 6 (lower is better)
Translates to: GHQPGVPIFTKL*WPDLQIPSINY
Trigger: ATAGTTGATGCTGGGAATTTGGAGATCAGGCCACCAGAGCTTGGTGAATATTGGAACACCTGGCTGGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466712.1
CDS GCA 72 bp CAGGGAACCAGGTCTGTGTGGTTCAAGGTAATGATCTaGGGTCCAGTCTGTGGAACAAATAAAGGAAGGAGG +
Preference number: 6 (lower is better)
Translates to: QGTRSVWFKVMI*GPVCGTNKGRR
Trigger: CCTCCTTCCTTTATTTGTTCCACAGACTGGACCGCAGATCATTACCTTGAACCACACAGACCTGGTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464406.5
ENST00000466046.5
ENST00000494365.5
CDS CCA 72 bp CACCAGCCAGGTGTTCCAATATTCACCAAGCTCTGGTaGCCTGATCTCCAAATTCCCAGCATCAACTATGCA +
Preference number: 6 (lower is better)
Translates to: HQPGVPIFTKLW*PDLQIPSINYA
Trigger: TGCATAGTTGATGCTGGGAATTTGGAGATCAGGCCACCAGAGCTTGGTGAATATTGGAACACCTGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466712.1
CDS CAA 72 bp TGCGGTCCAGTCTGTGGAACAAATAAAGGAAGGAGGTaGGAGAAGATAAGGAGGAAGAGGAGGAGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: CGPVCGTNKGRR*EKIRRKRRRPK
Trigger: CTTTGGCCTCCTCCTCTTCCTCCTTATCTTCTCCAACCTCCTTCCTTTATTTGTTCCACAGACTGGACCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464406.5
ENST00000466046.5
ENST00000478206.1
ENST00000490512.5
ENST00000494365.5
CDS GCA 72 bp GAGATTCCTTTCTCACATGACCACCCTGCTAAAAATTaGAACCCCAGTCCCACCTTATCCCTTTCCCATGGT +
Preference number: 6 (lower is better)
Translates to: EIPFSHDHPAKN*NPSPTLSLSHG
Trigger: ACCATGGGAAAGGGATAAGGTGGGACTGGGGTTGCAATTTTTAGCAGGGTGGTCATGTGAGAAAGGAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CAA 90 bp GTAATGATCTGCGGTCCAGTCTGTGGAACAAATAAAGGAAGGAGGTaGGAGAAGATAAGGAGGAAGAGGAGGAGGCCAAAGTCAAGGAAA +
Preference number: 6 (lower is better)
Translates to: VMICGPVCGTNKGRR*EKIRRKRRRPKSRK
Trigger: TTTCCTTGACTTTGGCCTCCTCCTCTTCCTCCTTATCTTCTCCAACCTCCTTCCTTTATTTGTTCCACAGACTGGACCGCAGATCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464406.5
ENST00000466046.5
ENST00000478206.1
ENST00000490512.5
ENST00000494365.5
CDS TCA 72 bp TGCTCTGCCTTTGTGCTGTGCCCACTGACTAGGGTATaGCTTCTTCCATACCAAATCTGGCTTATAGGAAGA +
Preference number: 6 (lower is better)
Translates to: CSAFVLCPLTRV*LLPYQIWLIGR
Trigger: TCTTCCTATAAGCCAGATTTGGTATGGAAGAAGTCATACCCTAGTCAGTGGGCACAGCACAAAGGCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466712.1
CDS TCA 72 bp GCCAGGTGTTCCAATATTCACCAAGCTCTGGTGGCCTaGTCTCCAAATTCCCAGCATCAACTATGCATATCT +
Preference number: 6 (lower is better)
Translates to: ARCSNIHQALVA*SPNSQHQLCIS
Trigger: AGATATGCATAGTTGATGCTGGGAATTTGGAGATCAGGCCACCAGAGCTTGGTGAATATTGGAACACCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466712.1
CDS CCA 72 bp TCTGACCCTAAAGCTGTTTTTATGTCTTACGGAGCATaGTTCCCCTCTCATCTAACCTTCTCAAAGAGATTC +
Preference number: 6 (lower is better)
Translates to: SDPKAVFMSYGA*FPSHLTFSKRF
Trigger: GAATCTCTTTGAGAAGGTTAGATGAGAGGGGAACCATGCTCCGTAAGACATAAAAACAGCTTTAGGGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497387.5
CDS CCA 72 bp AAATTGCAACCCCAGTCCCACCTTATCCCTTTCCCATaGTATTTGTATGCAATTTTAAGATACTATATGATT +
Preference number: 6 (lower is better)
Translates to: KLQPQSHLIPFP*YLYAILRYYMI
Trigger: AATCATATAGTATCTTAAAATTGCATACAAATACCATGGGAAAGGGATAAGGTGGGACTGGGGTTGCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497387.5