RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL17RA (Homo sapiens)

Ensembl gene IDs: ENSG00000177663

Ensembl transcript IDs: ENST00000319363.11, ENST00000459971.1, ENST00000477874.1, ENST00000612619.1

Found 902 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGCGGCCCTCCATCTCACTCTGTCCTCAGGTGCCCCGGGCCTTaGTGGAGTCCCAGCTGGCAGGGCGCTAAGGCAGAAGAGGGCCCT +
Preference number: 1 (lower is better)
Translates to: SSGPPSHSVLRCPGP*WSPSWQGAKAEEGP
Trigger: AGGGCCCTCTTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTGAGATGGAGGGCCGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp AGCGGCCCTCCATCTCACTCTGTCCTCAGGTGCCCCGGGCCTTGCTaGAGTCCCAGCTGGCAGGGCGCTAAGGCAGAAGAGGGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: SGPPSHSVLRCPGPC*SPSWQGAKAEEGPA
Trigger: TGCAGGGCCCTCTTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTGAGATGGAGGGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp TCTCACTCTGTCCTCAGGTGCCCCGGGCCTTGCTGGAGTCCCAGCTaGCAGGGCGCTAAGGCAGAAGAGGGCCCTGCATACACCTCATTT +
Preference number: 1 (lower is better)
Translates to: SHSVLRCPGPCWSPS*QGAKAEEGPAYTSF
Trigger: AAATGAGGTGTATGCAGGGCCCTCTTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GCAGGGAAAGAGGATCAGTGGTACCTCAGGGGGCACAAACTGCTCTaGCCCAGAAGCAGGCTGGTGCCACTCGGGGATACTGCAGGCTTG +
Preference number: 1 (lower is better)
Translates to: AGKEDQWYLRGHKLL*PRSRLVPLGDTAGL
Trigger: CAAGCCTGCAGTATCCCCGAGTGGCACCAGCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGAGGTACCACTGATCCTCTTTCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp CTGGGCCAGGCTTCCTGGCACACTTCAAACCATGAGACAGGAGACTaGATGTTCCTCCCACAGGCAAGACTGGCCCACCCGGGTGACTGC +
Preference number: 1 (lower is better)
Translates to: LGQASWHTSNHETGD*MFLPQARLAHPGDC
Trigger: GCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATGGTTTGAAGTGTGCCAGGAAGCCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CAACCTAAATGGACAGGGCGAGAGTGTGGACCCAGTGCTAGGATCTaGGAGAGGCGATGGGGCATGGAGAGCCATGCAGAGGTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: QPKWTGRECGPSARI*ERRWGMESHAEVEG
Trigger: GCCCTCCACCTCTGCATGGCTCTCCATGCCCCATCGCCTCTCCCAGATCCTAGCACTGGGTCCACACTCTCGCCCTGTCCATTTAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp ACAGCCCCTCTCTGTGTTGTGACCCTAGCTTGCTGCTTCTGGCTGTaGCAAATGCTAAGCAGGCGTTTCACTCAGGGCAGCCCGGGAGGC +
Preference number: 1 (lower is better)
Translates to: TAPLCVVTLACCFWL*QMLSRRFTQGSPGG
Trigger: GCCTCCCGGGCTGCCCTGAGTGAAACGCCTGCTTAGCATTTGGCACAGCCAGAAGCAGCAAGCTAGGGTCACAACACAGAGAGGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CTAGGATCTGGGAGAGGCGATGGGGCATGGAGAGCCATGCAGAGGTaGAGGGCAAGATGGACCTGGATGCCATTTCAGAGTGAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: LGSGRGDGAWRAMQR*RARWTWMPFQSEGR
Trigger: CCTCCCCTCACTCTGAAATGGCATCCAGGTCCATCTTGCCCTCCACCTCTGCATGGCTCTCCATGCCCCATCGCCTCTCCCAGATCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp AGCAAGCTACCTAGGGCGGACGAGCAGCTGGCCAGCCCCCAACCCTaGTGCCTCTTCTTTGTAAGGATCCTCTGTCCGACACAGTTGACT +
Preference number: 1 (lower is better)
Translates to: SKLPRADEQLASPQP*CLFFVRILCPTQLT
Trigger: AGTCAACTGTGTCGGACAGAGGATCCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCTGGCCAGCTGCTCGTCCGCCCTAGGTAGCTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GCATGTTCCTCCCACAGGCAAGACTGGCCCACCCGGGTGACTGCCTaGTTTCATCAACCTAAATGGACAGGGCGAGAGTGTGGACCCAGT +
Preference number: 1 (lower is better)
Translates to: ACSSHRQDWPTRVTA*FHQPKWTGRECGPS
Trigger: ACTGGGTCCACACTCTCGCCCTGTCCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGAGGAACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CTGCCTCTTCTTTGTAAGGATCCTCTGTCCGACACAGTTGACTTGTaGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACT +
Preference number: 1 (lower is better)
Translates to: LPLLCKDPLSDTVDL*DAGPAAGAAALHLT
Trigger: AGTGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGGACAGAGGATCCTTACAAAGAAGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CAAGACTGGCCCACCCGGGTGACTGCCTGCTTTCATCAACCTAAATaGACAGGGCGAGAGTGTGGACCCAGTGCTAGGATCTGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: QDWPTRVTACFHQPK*TGRECGPSARIWER
Trigger: CCTCTCCCAGATCCTAGCACTGGGTCCACACTCTCGCCCTGTCCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 90 bp AGGAGACTGCATGTTCCTCCCACAGGCAAGACTGGCCCACCCGGGTaGCTGCCTGCTTTCATCAACCTAAATGGACAGGGCGAGAGTGTG +
Preference number: 1 (lower is better)
Translates to: RRLHVPPTGKTGPPG*LPAFINLNGQGESV
Trigger: CACACTCTCGCCCTGTCCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGAGGAACATGCAGTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp GAGCCTCAAGGACGCTCTACCATTAGCTCCTGGGAGCGGGCTGTGTaGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGA +
Preference number: 1 (lower is better)
Translates to: EPQGRSTISSWERAV*IPLGIDDNQTAAQR
Trigger: TCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGAGCGTCCTTGAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 90 bp GTGTCCAGACCCAACGAAGCCCCTCTCCAGGATTATTGGAGAGACTaGGCCCAAAAGGCTAGTGGCTGGGAGGCTTCTGCTCCTGTTCTC +
Preference number: 1 (lower is better)
Translates to: VSRPNEAPLQDYWRD*AQKASGWEASAPVL
Trigger: GAGAACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTTGGGCTCAGTCTCTCCAATAATCCTGGAGAGGGGCTTCGTTGGGTCTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GGCTGGGAGGCTTCTGCTCCTGTTCTCCTTTGCCTGGTCCTTTGCTaGTGTTGGGTGGATTATGGGCCATACACCATCTGGGACACAGAG +
Preference number: 1 (lower is better)
Translates to: GWEASAPVLLCLVLC*CWVDYGPYTIWDTE
Trigger: CTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GCCCAAAAGGCTAGTGGCTGGGAGGCTTCTGCTCCTGTTCTCCTTTaGCTGGTCCTTTGCTGCTGTTGGGTGGATTATGGGCCATACACC +
Preference number: 1 (lower is better)
Translates to: AQKASGWEASAPVLL*LVLCCCWVDYGPYT
Trigger: GGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GTCATGAAACTCTACGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTaGATAATCGGCCTGGACACAGGCATGGTTAGATGCTCCGCTGCT +
Preference number: 1 (lower is better)
Translates to: VMKLYAGVGSLLVAA*IIGLDTGMVRCSAA
Trigger: AGCAGCGGAGCATCTAACCATGCCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGTTTCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GTAGCTGGCACAATGCCACATTGCAGTCAGGAAGAAAAGCCAGTGTaGACCAAGGCCCTTCTTCCTCCCACATCTGCACTGCTCCAGGCA +
Preference number: 1 (lower is better)
Translates to: VAGTMPHCSQEEKPV*TKALLPPTSALLQA
Trigger: TGCCTGGAGCAGTGCAGATGTGGGAGGAAGAAGGGCCTTGGTGCACACTGGCTTTTCTTCCTGACTGCAATGTGGCATTGTGCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp ACCGGAGGAAGAGAGCAATACCTAATAGCAGGGAAAGAGGATCAGTaGTACCTCAGGGGGCACAAACTGCTCTGCCCCAGAAGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: TGGREQYLIAGKEDQ*YLRGHKLLCPRSRL
Trigger: CAGCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGAGGTACCACTGATCCTCTTTCCCTGCTATTAGGTATTGCTCTCTTCCTCCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp TATTACACAGCCCCTCTCTGTGTTGTGACCCTAGCTTGCTGCTTCTaGCTGTGCCAAATGCTAAGCAGGCGTTTCACTCAGGGCAGCCCG +
Preference number: 1 (lower is better)
Translates to: YYTAPLCVVTLACCF*LCQMLSRRFTQGSP
Trigger: CGGGCTGCCCTGAGTGAAACGCCTGCTTAGCATTTGGCACAGCCAGAAGCAGCAAGCTAGGGTCACAACACAGAGAGGGGCTGTGTAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 90 bp CCTATTCCAGTGTCAGACGGCACCTCAATGTGTTCTTCAGGACCCTaGAGCCAGAAGCCTCTAGCCTACCCCCAGGAGGTACTTCAGGAA +
Preference number: 1 (lower is better)
Translates to: PIPVSDGTSMCSSGP*SQKPLAYPQEVLQE
Trigger: TTCCTGAAGTACCTCCTGGGGGTAGGCTAGAGGCTTCTGGCTTCAGGGTCCTGAAGAACACATTGAGGTGCCGTCTGACACTGGAATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp AGCCAGTATTACACAGCCCCTCTCTGTGTTGTGACCCTAGCTTGCTaGTTCTGGCTGTGCCAAATGCTAAGCAGGCGTTTCACTCAGGGC +
Preference number: 1 (lower is better)
Translates to: SQYYTAPLCVVTLAC*FWLCQMLSRRFTQG
Trigger: GCCCTGAGTGAAACGCCTGCTTAGCATTTGGCACAGCCAGAAGCAGCAAGCTAGGGTCACAACACAGAGAGGGGCTGTGTAATACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CACTCCACTCACCTCCCAGCACTTACCCACAAACTGCTTCCTTGCTaGGACTACGCTTTCCCCAACCACAATCCTTCAGCTCAGGCATCT +
Preference number: 1 (lower is better)
Translates to: HSTHLPALTHKLLPC*DYAFPNHNPSAQAS
Trigger: AGATGCCTGAGCTGAAGGATTGTGGTTGGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGGGTAAGTGCTGGGAGGTGAGTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp TCCTGTTCTCCTTTGCCTGGTCCTTTGCTGCTGTTGGGTGGATTATaGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTA +
Preference number: 1 (lower is better)
Translates to: SCSPLPGPLLLLGGL*AIHHLGHRALVALL
Trigger: TAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CTTCTGCTCCTGTTCTCCTTTGCCTGGTCCTTTGCTGCTGTTGGGTaGATTATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: LLLLFSFAWSFAAVG*IMGHTPSGTQSFGG
Trigger: GCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp GAGGCTTCTGCTCCTGTTCTCCTTTGCCTGGTCCTTTGCTGCTGTTaGGTGGATTATGGGCCATACACCATCTGGGACACAGAGCTTTGG +
Preference number: 1 (lower is better)
Translates to: EASAPVLLCLVLCCC*VDYGPYTIWDTELW
Trigger: CCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CAAACCATGAGACAGGAGACTGCATGTTCCTCCCACAGGCAAGACTaGCCCACCCGGGTGACTGCCTGCTTTCATCAACCTAAATGGACA +
Preference number: 1 (lower is better)
Translates to: QTMRQETACSSHRQD*PTRVTACFHQPKWT
Trigger: TGTCCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp AATGAACGAATAATGGAGCCTCAAGGACGCTCTACCATTAGCTCCTaGGAGCGGGCTGTGTGGATTCCCCTGGGGATAGACGATAACCAG +
Preference number: 1 (lower is better)
Translates to: NERIMEPQGRSTISS*ERAVWIPLGIDDNQ
Trigger: CTGGTTATCGTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGAGCGTCCTTGAGGCTCCATTATTCGTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp AAAAGGCTAGTGGCTGGGAGGCTTCTGCTCCTGTTCTCCTTTGCCTaGTCCTTTGCTGCTGTTGGGTGGATTATGGGCCATACACCATCT +
Preference number: 1 (lower is better)
Translates to: KRLVAGRLLLLFSFA*SFAAVGWIMGHTPS
Trigger: AGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp TCGTTTAACGTGTCCTCGGCACTAGCGGTTAAGTTCCTTCATGGCTaGGGCCATGCCGCATGCAATTTATCTTGGTATCCCAAATGCCCG +
Preference number: 1 (lower is better)
Translates to: SFNVSSALAVKFLHG*GHAACNLSWYPKCP
Trigger: CGGGCATTTGGGATACCAAGATAAATTGCATGCGGCATGGCCCCAGCCATGAAGGAACTTAACCGCTAGTGCCGAGGACACGTTAAACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp GAAATGTCTTCTAGGGAAGCAAGCTGGCGCTCACCGATTTTGGTTTaGCAGGCATATCAGAAGGCACTTTGTGACAGGTGCAGTAGGGAC +
Preference number: 1 (lower is better)
Translates to: EMSSREASWRSPILV*QAYQKALCDRCSRD
Trigger: GTCCCTACTGCACCTGTCACAAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGAAGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp AGTCGGAACGCGGGTGCAGGGCTTCAGACTCACCTTCCTGCCAGATaGTTTTACGTTTCACCTCGACATTTCTCTCTTCCTATAAATGAA +
Preference number: 1 (lower is better)
Translates to: SRNAGAGLQTHLPAR*FYVSPRHFSLPINE
Trigger: TTCATTTATAGGAAGAGAGAAATGTCGAGGTGAAACGTAAAAGCATCTGGCAGGAAGGTGAGTCTGAAGCCCTGCACCCGCGTTCCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 90 bp TACGTTTCACCTCGACATTTCTCTCTTCCTATAAATGAACTCAGGTaGCATCCAGCTGTGTTTAGCCCTCAGCCTCTCTCCATGCAGAGG +
Preference number: 1 (lower is better)
Translates to: YVSPRHFSLPINELR*HPAVFSPQPLSMQR
Trigger: CCTCTGCATGGAGAGAGGCTGAGGGCTAAACACAGCTGGATGTCACCTGAGTTCATTTATAGGAAGAGAGAAATGTCGAGGTGAAACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp CAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCTCTTTTCAAATaGTGTCTTTGGACCTCAGACCCTGAAGTCACAGCAGCACCCCTT +
Preference number: 1 (lower is better)
Translates to: QEQILQTLASEPLFK*CLWTSDPEVTAAPL
Trigger: AAGGGGTGCTGCTGTGACTTCAGGGTCTGAGGTCCAAAGACAGCATTTGAAAAGAGGCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp CCATTTCTACAAAATATATACACACAAATTAGCCGGGCACAGTGGTaGACGCCTGTAGTTCTAGCCACTGGCAGGCTGAGGTGGAAAGAT +
Preference number: 1 (lower is better)
Translates to: PFLQNIYTQISRAQW*TPVVLATGRLRWKD
Trigger: ATCTTTCCACCTCAGCCTGCCAGTGGCTAGAACTACAGGCGTGCACCACTGTGCCCGGCTAATTTGTGTGTATATATTTTGTAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp GTTAAGTTCCTTCATGGCTGGGGCCATGCCGCATGCAATTTATCTTaGTATCCCAAATGCCCGCCACATAGTAGGTGCACAATAAATGCT +
Preference number: 1 (lower is better)
Translates to: VKFLHGWGHAACNLS*YPKCPPHSRCTINA
Trigger: AGCATTTATTGTGCACCTACTATGTGGCGGGCATTTGGGATACCAAGATAAATTGCATGCGGCATGGCCCCAGCCATGAAGGAACTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp TGGGAGCAGATGGGAACATGTGCTCTACGCAGGAAGAGTGCATTGTaGTATCCTGTACTCTGGGCGTCAAACAGTTATTTATTGGAAGCT +
Preference number: 1 (lower is better)
Translates to: WEQMGTCALRRKSAL*YPVLWASNSYLLEA
Trigger: AGCTTCCAATAAATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAGAGCACATGTTCCCATCTGCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 90 bp CATTTCACACACGAACATATACACATGCAGACATGTACACACAGATaGATACGTGCACACACACTCCTCTCTCAAAGCTGGGATCTGGGC +
Preference number: 1 (lower is better)
Translates to: HFTHEHIHMQTCTHR*IRAHTLLSQSWDLG
Trigger: GCCCAGATCCCAGCTTTGAGAGAGGAGTGTGTGTGCACGTATTCATCTGTGTGTACATGTCTGCATGTGTATATGTTCGTGTGTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp GTGCATTGTGGTATCCTGTACTCTGGGCGTCAAACAGTTATTTATTaGAAGCTAGGGAAAGGTCACAGAATGCATGGTAGGTGTCCAGAC +
Preference number: 1 (lower is better)
Translates to: VHCGILYSGRQTVIY*KLGKGHRMHGRCPD
Trigger: GTCTGGACACCTACCATGCATTCTGTGACCTTTCCCTAGCTTCCAATAAATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp ACATGTGCTCTACGCAGGAAGAGTGCATTGTGGTATCCTGTACTCTaGGCGTCAAACAGTTATTTATTGGAAGCTAGGGAAAGGTCACAG +
Preference number: 1 (lower is better)
Translates to: TCALRRKSALWYPVL*ASNSYLLEARERSQ
Trigger: CTGTGACCTTTCCCTAGCTTCCAATAAATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAGAGCACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CTGAGCTCTCTCTGCCTCTCGTTAGCTGTGGCTTTGGCCATCAACTaGAACTATGTCATTATTTATAAAACAGGAGCAATCACAGGGCTG +
Preference number: 1 (lower is better)
Translates to: LSSLCLSLAVALAIN*NYVIIYKTGAITGL
Trigger: CAGCCCTGTGATTGCTCCTGTTTTATAAATAATGACATAGTTCCAGTTGATGGCCAAAGCCACAGCTAACGAGAGGCAGAGAGAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 90 bp CAAGCATGTTATGAATATTTAGAAATGTCTTCTAGGGAAGCAAGCTaGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTT +
Preference number: 1 (lower is better)
Translates to: QACYEYLEMSSREAS*RSPILVCQAYQKAL
Trigger: AAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGAAGACATTTCTAAATATTCATAACATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp CATTTACATTTTAAAGCCTACATTTCACACACGAACATATACACATaGAGACATGTACACACAGATGAATACGTGCACACACACTCCTCT +
Preference number: 1 (lower is better)
Translates to: HLHFKAYISHTNIYT*RHVHTDEYVHTHSS
Trigger: AGAGGAGTGTGTGTGCACGTATTCATCTGTGTGTACATGTCTGCATGTGTATATGTTCGTGTGTGAAATGTAGGCTTTAAAATGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 90 bp TTCTTCATATTCTTCTATAAAATATACCCATGGAATCCATATTGTTaGCATTTTTCCACAATGGACATGTTCACTCAGCCAAGTACTTCC +
Preference number: 1 (lower is better)
Translates to: FFIFFYKIYPWNPYC*HFSTMDMFTQPSTS
Trigger: GGAAGTACTTGGCTGAGTGAACATGTCCATTGTGGAAAAATGGCAACAATATGGATTCCATGGGTATATTTTATAGAAGAATATGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTGCCCCGGGCCTTGCTaGAGTCCCAGCTGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSCPGPC*SPSWQG
Trigger: GCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATCCCACAGGCAAGACTaGCCCACCCGGGTGACTGCC +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSHRQD*PTRVTA
Trigger: GGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTTGGACCTCAGACCCTaGAGTCACAGCAGCACCCCT +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSLDLRP*SHSSTP
Trigger: AGGGGTGCTGCTGTGACTTCAGGGTCTGAGGTCCAA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACCCAGTGCTAGGATCTaGGAGAGGCGATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPPSARI*ERRWGM
Trigger: CATGCCCCATCGCCTCTCCCAGATCCTAGCACTGGG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATTGGACCTCAGACCCTaGAGTCACAGCAGCACCCCT +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPLDLRP*SHSSTP
Trigger: AGGGGTGCTGCTGTGACTTCAGGGTCTGAGGTCCAA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATGCTGGAGTCCCAGCTaGCAGGGCGCTAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISCWSPS*QGAKAE
Trigger: TTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACAGCCAAGTACTTCCTaGGCTCCTGAGAGACGCCAA +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPQPSTS*APERRQ
Trigger: TTGGCGTCTCTCAGGAGCTCAGGAAGTACTTGGCTG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGAGCTCCAGCCCAGCTaGTCTGAAGAATCCTACGTG +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPELQPS*SEESYV
Trigger: CACGTAGGATTCTTCAGAGCAGCTGGGCTGGAGCTC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGCAGATGGGAACATGTaGTCTACGCAGGAAGAGTGC +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSADGNM*STQEEC
Trigger: GCACTCTTCCTGCGTAGAGCACATGTTCCCATCTGC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAAACCGGAACCACCTCTaGACACTCAGGAGACGAGCT +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPNRNHL*TLRRRA
Trigger: AGCTCGTCTCCTGAGTGTGCAGAGGTGGTTCCGGTT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGGGTTTCACCATGTTaGCCAGGCTGGCTCAAACTC +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGVSPC*PGWLKL
Trigger: GAGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGCAGCCTCTACCTCCTaGGCTCAAGTGATCATCTGG +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISAASTS*AQVIIW
Trigger: CCAGATGATCACTTGAGCCCAGGAGGTAGAGGCTGC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACAAAAGGCTAGTGGCTaGGAGGCTTCTGCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPQKASG*EASAPV
Trigger: AACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTTG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAGGAATGGGAGCAGATaGGAACATGTGCTCTACGCA +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSRNGSR*EHVLYA
Trigger: TGCGTAGAGCACATGTTCCCATCTGCTCCCATTCCT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 90 bp CTGCTGCCTCTTCTTTGTAAGGATCCTCTGTCCGACACAGTTGACTaGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTC +
Preference number: 2 (lower is better)
Translates to: LLPLLCKDPLSDTVD*WDAGPAAGAAALHL
Trigger: GAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGGACAGAGGATCCTTACAAAGAAGAGGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCCAGCCCAGCTGCTCTaGAGAATCCTACGTGCTAAC +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRPAQLL*RILRAN
Trigger: GTTAGCACGTAGGATTCTTCAGAGCAGCTGGGCTGG...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGATTATTGGAGAGACTaGGCCCAAAAGGCTAGTGGC +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPDYWRD*AQKASG
Trigger: GCCACTAGCCTTTTGGGCTCAGTCTCTCCAATAATC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAAGAATTCAAGGTTCCTaGGGAATGGGAGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPRIQGS*GMGADG
Trigger: CCCATCTGCTCCCATTCCTCAGGAACCTTGAATTCT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTCATCCAGGCTGCAGTaGAATGGCACAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSSRLQ*NGTISA
Trigger: AGCCGAGATTGTGCCATTGCACTGCAGCCTGGATGA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAACCATTATAGCTCACTaGAGCCTCTACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISTIIAH*SLYLLG
Trigger: GCCCAGGAGGTAGAGGCTGCAGTGAGCTATAATGGT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACACAAACTGCTTCCTTaGTGGGACTACGCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISHKLLP*WDYAFP
Trigger: GGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCACAAACTGCTTCCTTaGTGGGACTACGCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPHKLLP*WDYAFP
Trigger: GGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGCAAACTGTCCTGTTTaGTCTCCTGTCACATTTCCG +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSANCPV*SPVTFP
Trigger: CGGAAATGTGACAGGAGAGCAAACAGGACAGTTTGC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCTTTGCCTGGTCCTTTaGTGCTGTTGGGTGGATTAT +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSLCLVL*CCWVDY
Trigger: ATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTGGCTGGGAGGCTTCTaGTCCTGTTCTCCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRWLGGF*SCSPLP
Trigger: AGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCCA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAGGTGCCCCGGGCCTTaGTGGAGTCCCAGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPRCPGP*WSPSWQ
Trigger: CTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAAAGTTCCTTCATGGCTaGGGCCATGCCGCATGCAAT +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISKFLHG*GHAACN
Trigger: ATTGCATGCGGCATGGCCCCAGCCATGAAGGAACTT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACTGTTGGGTGGATTATaGGCCATACACCATCTGGGA +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPLLGGL*AIHHLG
Trigger: TCCCAGATGGTGTATGGCCCATAATCCACCCAACAG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGACATTTACTGGCATaGGCTCAAAGGCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGHLLA*AQRPAE
Trigger: CTCTGCTGGCCTTTGAGCCCATGCCAGTAAATGTCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTGCAGGCCCGGCTGCTaGAGCAGCGGCCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCCRPGC*SSGPPS
Trigger: AGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGCAGGAAAAAGTCATaGAACTCTACGCGGGAGTTG +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGRKKS*NSTREL
Trigger: CAACTCCCGCGTAGAGTTTCATGACTTTTTCCTGCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGCTGCAGTGAGCCATaGTTGCACCACTGTAATACA +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGCSEP*LHHCNT
Trigger: TGTATTACAGTGGTGCAATCATGGCTCACTGCAGCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGAAAGGTCACAGAATaGATGGTAGGTGTCCAGACC +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGKVTE*MVGVQT
Trigger: GGTCTGGACACCTACCATGCATTCTGTGACCTTTCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACTCAAAGCTGGGATCTaGGCGGTCCCTGGGGAGCCG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPLKAGI*AVPGEP
Trigger: CGGCTCCCCAGGGACCGCCCAGATCCCAGCTTTGAG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCAAAAGGCTAGTGGCTaGGAGGCTTCTGCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRQKASG*EASAPV
Trigger: AACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTTG...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACAACTAGCAACTTCTTaGCCTACAGTAAGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISQLATS*PTVSGS
Trigger: CGAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTCATGGCTGGGGCCATaGCGCATGCAATTTATCTTG +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRSWLGP*RMQFIL
Trigger: CAAGATAAATTGCATGCGGCATGGCCCCAGCCATGA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTAGGCGTGAGCCACCGTaGCCGGCCCATCCTGTTCGT +
Preference number: 2 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFRREPP*PAHPVR
Trigger: ACGAACAGGATGGGCCGGGCACGGTGGCTCACGCCT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAGGCATGTGTCACCATaGCCGGCTAATTTTTCTATT +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSRHVSP*PANFSI
Trigger: AATAGAAAAATTAGCCGGGCATGGTGACACATGCCT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATCTACGCAGGAAGAGTaGATTGTGGTATCCTGTACT +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSTQEE*IVVSCT
Trigger: AGTACAGGATACCACAATGCACTCTTCCTGCGTAGA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCACTCTGTCCTCAGGTaGCCCGGGCCTTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCHSVLR*PGPCWS
Trigger: ACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGACGAGCTGAAGAGGTaGGAGGGGCACAGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCDELKR*EGHSVE
Trigger: CTCCACGCTGTGCCCCTCCCACCTCTTCAGCTCGTC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGCCCCAGAAGCAGGCTaGTGCCACTCGGGGATACTG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPAPEAG*CHSGIL
Trigger: CAGTATCCCCGAGTGGCACCAGCCTGCTTCTGGGGC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGCTGGCTCAAACTCCTaGCCTCAGAGTGATCCACCT +
Preference number: 2 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRAGSNS*PQSDPP
Trigger: AGGTGGATCACTCTGAGGTCAGGAGTTTGAGCCAGC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTGCCCAGATCTTCACTaGCCCACCACCCCTCATTTC +
Preference number: 2 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRCPDLH*PTTPHF
Trigger: GAAATGAGGGGTGGTGGGTCAGTGAAGATCTGGGCA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAACTGGCCCACCCGGGTaGCTGCCTGCTTTCATCAAC +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPTGPPG*LPAFIN
Trigger: GTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAACACAGATGAATACGTaGACACACACTCCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISTQMNT*THTPLS
Trigger: TGAGAGAGGAGTGTGTGTGCACGTATTCATCTGTGT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTAGGCGTGAGCCACCGTaGCCGGCCCATCCTGTTCGT +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFRREPP*PAHPVR
Trigger: ACGAACAGGATGGGCCGGGCACGGTGGCTCACGCCT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATGCCTTTCCCGTGCATaGTCACAACCCTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPCLSRA*SQPWAG
Trigger: GCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGCA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGAGATAGTAGGCAATaGCCATCAGGACATTTACTG +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGDSRQ*PSGHLL
Trigger: CAGTAAATGTCCTGATGGGCATTGCCTACTATCTCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGCAGAAGAGGGCCCTaGATACACCTCATTTATTTA +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGRRGP*IHLIYL
Trigger: TAAATAAATGAGGTGTATGCAGGGCCCTCTTCTGCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGGGCACAAACTGCTCTaGCCCAGAAGCAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCGHKLL*PRSRLV
Trigger: CACCAGCCTGCTTCTGGGGCAGAGCAGTTTGTGCCC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATCAGGGGGCACAAACTaGTCTGCCCCAGAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPSGGTN*SAPEAG
Trigger: GCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCTCAAAGCTGGGATCTaGGCGGTCCCTGGGGAGCCG +
Preference number: 2 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSLKAGI*AVPGEP
Trigger: CGGCTCCCCAGGGACCGCCCAGATCCCAGCTTTGAG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTTGACCTACAGTAAGTaGCTCGACCTTCCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRLTYSK*LDLPAR
Trigger: TCTAGCAGGAAGGTCGAGCCACTTACTGTAGGTCAA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGGGAGGGGCACAGCGTaGAGGGCACCTGTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCGRGTA*RAPVLR
Trigger: TCTAAGAACAGGTGCCCTCCACGCTGTGCCCCTCCC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCACAATAAATGCTGAATaGACGAATAATGGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSTINAE*TNNGAS
Trigger: TGAGGCTCCATTATTCGTTCATTCAGCATTTATTGT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCGCCCAGGCTGGTCTTaGACTCCTGAGCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCRPGWS*TPELKQ
Trigger: TTGCTTGAGCTCAGGAGTTCAAGACCAGCCTGGGCG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCTCTCTTCCTATAAATaGACTCAGGTGACATCCAGC +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRLSSYK*TQVTSS
Trigger: GCTGGATGTCACCTGAGTTCATTTATAGGAAGAGAG...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCACCTAGGCCTTGCCTaGGTCTGGCCATGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCHLGLA*VWPCSS
Trigger: AGAACTGCATGGCCAGACTCAGGCAAGGCCTAGGTG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGACCGGCATCAAATTGTaGAGGGTCAATTGTGGATTG +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRTGIKL*RVNCGL
Trigger: CAATCCACAATTGACCCTGCACAATTTGATGCCGGT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATCAAGGACCTTCCTATaGAGAAAAGAGAAACTGGTT +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSRTFL*RKEKLV
Trigger: AACCAGTTTCTCTTTTCTGCATAGGAAGGTCCTTGA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGCCAGCCCCCAACCCTaGTGCCTCTTCTTTGTAAGG +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCASPQP*CLFFVR
Trigger: CCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCTGGC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGCCACTCGGGGATACTaGAGGCTTGCCAGGACCCCA +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFATRGY*RLARTP
Trigger: TGGGGTCCTGGCAAGCCTGCAGTATCCCCGAGTGGC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACTCCTCTCTCAAAGCTaGGATCTGGGCGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKLLSQS*DLGGPW
Trigger: CCAGGGACCGCCCAGATCCCAGCTTTGAGAGAGGAG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCAAACAGTTATTTATTaGAAGCTAGGGAAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSQTVIY*KLGKGH
Trigger: GTGACCTTTCCCTAGCTTCCAATAAATAACTGTTTG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATGGTATCCTGTACTCTaGGCGTCAAACAGTTATTTA +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPWYPVL*ASNSYL
Trigger: TAAATAACTGTTTGACGCCCAGAGTACAGGATACCA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGACGAGCTGAAGAGGTaGGAGGGGCACAGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFDELKR*EGHSVE
Trigger: CTCCACGCTGTGCCCCTCCCACCTCTTCAGCTCGTC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGCAGGCCCGGCTGCTaGAGCAGCGGCCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWCRPGC*SSGPPS
Trigger: AGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAGGGGTTATTCCTCCTaGGAAGGACTCCAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPRGYSS*EGLQGE
Trigger: CTCCCCCTGGAGTCCTTCCCAGGAGGAATAACCCCT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 90 bp GGAGGCTTCTGCTCCTGTTCTCCTTTGCCTGGTCCTTTGCTGCTGTaGGGTGGATTATGGGCCATACACCATCTGGGACACAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: GGFCSCSPLPGPLLL*GGLWAIHHLGHRAL
Trigger: CAAAGCTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGGTGGAAAGATGGCTTaGGCCTGGGAGGTCGAGGCT +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFGGKMA*AWEVEA
Trigger: AGCCTCGACCTCCCAGGCTCAAGCCATCTTTCCACC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTGCCTTTCCCGTGCATaGTCACAACCCTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSCLSRA*SQPWAG
Trigger: GCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGCA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTCAGGGGGCACAAACTaGTCTGCCCCAGAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFSGGTN*SAPEAG
Trigger: GCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCTCCCACATCTGCACTaGTCCAGGCAACCTTCGGTA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCLPHLH*SRQPSV
Trigger: TACCGAAGGTTGCCTGGAGCAGTGCAGATGTGGGAG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGGGGTTTCACCATGTTaGCCAGGCTGGCTCAAACTC +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPGVSPC*PGWLKL
Trigger: GAGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCACTGGGCCCAGGAAATaGGGAGGGAATGTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCTGPRK*GGNVRR
Trigger: TCTCCTCACATTCCCTCCCCATTTCCTGGGCCCAGT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 90 bp AGGCAGGAAAAAGTCATGAAACTCTACGCGGGAGTTGGGAGCTTGTaGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCATGGTTAGA +
Preference number: 2 (lower is better)
Translates to: RQEKVMKLYAGVGSL*VAACIIGLDTGMVR
Trigger: TCTAACCATGCCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGTTTCATGACTTTTTCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAATGTTCTTCAGGACCCTaGAGCCAGAAGCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKCSSGP*SQKPLA
Trigger: GGCTAGAGGCTTCTGGCTTCAGGGTCCTGAAGAACA...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAACCTTGGAGAATTTATaGCTCCTTTCTCTATGTCAT +
Preference number: 2 (lower is better)
Translates to: QLTCGMQARLLEQRPSISTLENL*LLSLCH
Trigger: ATGACATAGAGAAAGGAGTCATAAATTCTCCAAGGT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACTCAGCCTCTCTCCATaGAGAGGCTCATCAGACGAA +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPLSLSP*RGSSDE
Trigger: TTCGTCTGATGAGCCTCTGCATGGAGAGAGGCTGAG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCAGCCCCCAACCCTGCTaGCTCTTCTTTGTAAGGATC +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCSPQPC*LFFVRI
Trigger: GATCCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACATGAGACAGGAGACTaGATGTTCCTCCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPHETGD*MFLPQA
Trigger: TGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCATGAGACAGGAGACTaGATGTTCCTCCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCHETGD*MFLPQA
Trigger: TGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCTCCTCTCTCAAAGCTaGGATCTGGGCGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQLLSQS*DLGGPW
Trigger: CCAGGGACCGCCCAGATCCCAGCTTTGAGAGAGGAG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCTGTTCTCCTTTGCCTaGTCCTTTGCTGCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCLFSFA*SFAAVG
Trigger: CCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAAAGAAACAGACACCTTaGAGAATTTATGACTCCTTT +
Preference number: 2 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPKKQTP*RIYDSF
Trigger: AAAGGAGTCATAAATTCTCCAAGGTGTCTGTTTCTT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAATTAGCCGGGCACAGTaGTGCACGCCTGTAGTTCTA +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPISRAQ*CTPVVL
Trigger: TAGAACTACAGGCGTGCACCACTGTGCCCGGCTAAT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCATTAGCCGGGCACAGTaGTGCACGCCTGTAGTTCTA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCISRAQ*CTPVVL
Trigger: TAGAACTACAGGCGTGCACCACTGTGCCCGGCTAAT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGACACAGTTGACTTGTaGGATGCAGGCCCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFDTVDL*DAGPAA
Trigger: AGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGGGAAAGAGGATCAGTaGTACCTCAGGGGGCACAAA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCGKEDQ*YLRGHK
Trigger: TTTGTGCCCCCTGAGGTACCACTGATCCTCTTTCCC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCCACCAGCAGCTCCCTaGCAAGCTCACTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWPPAAP*QAHSTH
Trigger: GTGAGTGGAGTGAGCTTGTCAGGGAGCTGCTGGTGG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCCAGCCCAGCTGCTCTaGAGAATCCTACGTGCTAAC +
Preference number: 2 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSPAQLL*RILRAN
Trigger: GTTAGCACGTAGGATTCTTCAGAGCAGCTGGGCTGG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTGCCCAGATCTTCACTaGCCCACCACCCCTCATTTC +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFCPDLH*PTTPHF
Trigger: GAAATGAGGGGTGGTGGGTCAGTGAAGATCTGGGCA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAGAATTCAAGGTTCCTaGGGAATGGGAGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPRIQGS*GMGADG
Trigger: CCCATCTGCTCCCATTCCTCAGGAACCTTGAATTCT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGTGGAAAGATGGCTTaGGCCTGGGAGGTCGAGGCT +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGGKMA*AWEVEA
Trigger: AGCCTCGACCTCCCAGGCTCAAGCCATCTTTCCACC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACTCGCCTTCCCAAAGTaGTGGGATTACAAGCATGAG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPLAFPK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTTGGGAAGGCGAG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACACTTACCCACAAACTaGTTCCTTGCTGGGACTACG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPHLPTN*FLAGTT
Trigger: CGTAGTCCCAGCAAGGAAGCAGTTTGTGGGTAAGTG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACTCAGCCTCTCTCCATaGAGAGGCTCATCAGACGAA +
Preference number: 2 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKLSLSP*RGSSDE
Trigger: TTCGTCTGATGAGCCTCTGCATGGAGAGAGGCTGAG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGGAAAGGTCACAGAATaGATGGTAGGTGTCCAGACC +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPGKVTE*MVGVQT
Trigger: GGTCTGGACACCTACCATGCATTCTGTGACCTTTCC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGAGCTTGTTGGTGGCTaGGTGCATAATCGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFELVGG*VHNRPG
Trigger: TCCAGGCCGATTATGCACGCAGCCACCAACAAGCTC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGGGAGCGGGCTGTGTaGATTCCCCTGGGGATAGAC +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWWERAV*IPLGID
Trigger: GTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACTCTGCTGCCCAGGCTaGATTGCAATGGTACCATTA +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPLCCPG*IAMVPL
Trigger: TAATGGTACCATTGCAATCCAGCCTGGGCAGCAGAG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAAATTCTTCAAACACTaGCTTCAGAGCCTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRKFFKH*LQSLFS
Trigger: TGAAAAGAGGCTCTGAAGCCAGTGTTTGAAGAATTT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCTGTTGGGTGGATTATaGGCCATACACCATCTGGGA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCLLGGL*AIHHLG
Trigger: TCCCAGATGGTGTATGGCCCATAATCCACCCAACAG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCAGGGCAAGATGGACCTaGATGCCATTTCAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCRARWT*MPFQSE
Trigger: CTCACTCTGAAATGGCATCCAGGTCCATCTTGCCCT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAGGTCGAGGCTGCAGTaGGCCATGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWRSRLQ*AMIAPL
Trigger: CAGTGGTGCAATCATGGCTCACTGCAGCCTCGACCT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACAGGCATGTGTCACCATaGCCGGCTAATTTTTCTATT +
Preference number: 2 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYRHVSP*PANFSI
Trigger: AATAGAAAAATTAGCCGGGCATGGTGACACATGCCT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCACCATTATAGCTCACTaGAGCCTCTACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSTIIAH*SLYLLG
Trigger: GCCCAGGAGGTAGAGGCTGCAGTGAGCTATAATGGT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGCAAACTGTCCTGTTTaGTCTCCTGTCACATTTCCG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPANCPV*SPVTFP
Trigger: CGGAAATGTGACAGGAGAGCAAACAGGACAGTTTGC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTCTACCATTAGCTCCTaGGAGCGGGCTGTGTGGATT +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFSTISS*ERAVWI
Trigger: AATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGTCCTTTGCTGCTGTTaGGTGGATTATGGGCCATAC +
Preference number: 2 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKVLCCC*VDYGPY
Trigger: GTATGGCCCATAATCCACCCAACAGCAGCAAAGGAC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTAGGTGGAGGGCAAGATaGACCTGGATGCCATTTCAG +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFRWRAR*TWMPFQ
Trigger: CTGAAATGGCATCCAGGTCCATCTTGCCCTCCACCT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATGTTCTTCAGGACCCTaGAGCCAGAAGCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELCSSGP*SQKPLA
Trigger: GGCTAGAGGCTTCTGGCTTCAGGGTCCTGAAGAACA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTACTTCCTGAGCTCCTaGGAGACGCCAAATATGGGA +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFYFLSS*ETPNMG
Trigger: TCCCATATTTGGCGTCTCTCAGGAGCTCAGGAAGTA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGCTGTTTTCATCTTCTaGGAGAATCCCATGACACTG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPAVFIF*ENPMTL
Trigger: CAGTGTCATGGGATTCTCTCAGAAGATGAAAACAGC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAACCGGCATCAAATTGTaGAGGGTCAATTGTGGATTG +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPTGIKL*RVNCGL
Trigger: CAATCCACAATTGACCCTGCACAATTTGATGCCGGT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAACCGGAACCACCTCTaGACACTCAGGAGACGAGCT +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWNRNHL*TLRRRA
Trigger: AGCTCGTCTCCTGAGTGTGCAGAGGTGGTTCCGGTT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTACAGGCATGGTTAGATaGTCCGCTGCTTCTTTCCCA +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFTGMVR*SAASFP
Trigger: TGGGAAAGAAGCAGCGGAGCATCTAACCATGCCTGT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGAGCTTGTTGGTGGCTaGGTGCATAATCGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWELVGG*VHNRPG
Trigger: TCCAGGCCGATTATGCACGCAGCCACCAACAAGCTC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTATGAGCCACTGCACCTaGCCCATTCAGCGTTTACAT +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFMSHCT*PIQRLH
Trigger: ATGTAAACGCTGAATGGGCCAGGTGCAGTGGCTCAT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAGCAGCCTCTACCTCCTaGGCTCAAGTGATCATCTGG +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELAASTS*AQVIIW
Trigger: CCAGATGATCACTTGAGCCCAGGAGGTAGAGGCTGC...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCTCTGCTGCCCAGGCTaGATTGCAATGGTACCATTA +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFLCCPG*IAMVPL
Trigger: TAATGGTACCATTGCAATCCAGCCTGGGCAGCAGAG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAAAGGTTCCTGAGGAATaGGAGCAGATGGGAACATGT +
Preference number: 2 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKKVPEE*EQMGTC
Trigger: ACATGTTCCCATCTGCTCCCATTCCTCAGGAACCTT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTAGGGCAAGATGGACCTaGATGCCATTTCAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFRARWT*MPFQSE
Trigger: CTCACTCTGAAATGGCATCCAGGTCCATCTTGCCCT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATCATCCAGGCTGCAGTaGAATGGCACAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELSSRLQ*NGTISA
Trigger: AGCCGAGATTGTGCCATTGCACTGCAGCCTGGATGA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATCTACCATTAGCTCCTaGGAGCGGGCTGTGTGGATT +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELSTISS*ERAVWI
Trigger: AATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGCATGCAATTTATCTTaGTATCCCAAATGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFACNLS*YPKCPP
Trigger: TGGCGGGCATTTGGGATACCAAGATAAATTGCATGC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAAGTTCCTTCATGGCTaGGGCCATGCCGCATGCAAT +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWKFLHG*GHAACN
Trigger: ATTGCATGCGGCATGGCCCCAGCCATGAAGGAACTT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGACATTTACTGGCATaGGCTCAAAGGCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGHLLA*AQRPAE
Trigger: CTCTGCTGGCCTTTGAGCCCATGCCAGTAAATGTCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAGGTGGAGGGCAAGATaGACCTGGATGCCATTTCAG +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWRWRAR*TWMPFQ
Trigger: CTGAAATGGCATCCAGGTCCATCTTGCCCTCCACCT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCATTACTTCTATAATCTaGAAAGGCAAACACCGGAGG +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCITSII*KGKHRR
Trigger: CCTCCGGTGTTTGCCTTTTCAGATTATAGAAGTAAT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTCAGACTCACCTTCCTaGCAGATGCTTTTACGTTTC +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFSDSPS*QMLLRF
Trigger: GAAACGTAAAAGCATCTGGCAGGAAGGTGAGTCTGA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAATGAGCCACTGCACCTaGCCCATTCAGCGTTTACAT +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELMSHCT*PIQRLH
Trigger: ATGTAAACGCTGAATGGGCCAGGTGCAGTGGCTCAT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAAACTGCTTCCTTGCTaGGACTACGCTTTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELKLLPC*DYAFPN
Trigger: GTTGGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAGGAAGAGTGCATTGTaGTATCCTGTACTCTGGGCG +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWRKSAL*YPVLWA
Trigger: CGCCCAGAGTACAGGATACCACAATGCACTCTTCCT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAGGAATGGGAGCAGATaGGAACATGTGCTCTACGCA +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELRNGSR*EHVLYA
Trigger: TGCGTAGAGCACATGTTCCCATCTGCTCCCATTCCT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 90 bp GAATGGGAGCAGATGGGAACATGTGCTCTACGCAGGAAGAGTGCATaGTGGTATCCTGTACTCTGGGCGTCAAACAGTTATTTATTGGAA +
Preference number: 2 (lower is better)
Translates to: EWEQMGTCALRRKSA*WYPVLWASNSYLLE
Trigger: TTCCAATAAATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAGAGCACATGTTCCCATCTGCTCCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 90 bp TATTTAGAAATGTCTTCTAGGGAAGCAAGCTGGCGCTCACCGATTTaGGTTTGCCAGGCATATCAGAAGGCACTTTGTGACAGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: YLEMSSREASWRSPI*VCQAYQKALCDRCS
Trigger: ACTGCACCTGTCACAAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGAAGACATTTCTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTATAAATGAACTCAGGTaGCATCCAGCTGTGTTTAGC +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFINELR*HPAVFS
Trigger: GCTAAACACAGCTGGATGTCACCTGAGTTCATTTAT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGACACAGATGAATACGTaGACACACACTCCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQTQMNT*THTPLS
Trigger: TGAGAGAGGAGTGTGTGTGCACGTATTCATCTGTGT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCACCTTCCTGCCAGATaGTTTTACGTTTCACCTCGA +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWHLPAR*FYVSPR
Trigger: TCGAGGTGAAACGTAAAAGCATCTGGCAGGAAGGTG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCAAATTCTTCAAACACTaGCTTCAGAGCCTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCKFFKH*LQSLFS
Trigger: TGAAAAGAGGCTCTGAAGCCAGTGTTTGAAGAATTT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTTTGCTGCTGTTGGGTaGATTATGGGCCATACACCA +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWFAAVG*IMGHTP
Trigger: TGGTGTATGGCCCATAATCCACCCAACAGCAGCAAA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAAGGTTCCTGAGGAATaGGAGCAGATGGGAACATGT +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWKVPEE*EQMGTC
Trigger: ACATGTTCCCATCTGCTCCCATTCCTCAGGAACCTT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGTGCTGATGGCTGCTaGACTGTGACTATACTAAAC +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWCADGC*TVTILN
Trigger: GTTTAGTATAGTCACAGTTCAGCAGCCATCAGCACA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAGCATGCAATTTATCTTaGTATCCCAAATGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELACNLS*YPKCPP
Trigger: TGGCGGGCATTTGGGATACCAAGATAAATTGCATGC...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATTCAAATGCTGTCTTTaGACCTCAGACCCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: EALGIQRTANTILRVMELFKCCL*TSDPEV
Trigger: GACTTCAGGGTCTGAGGTCCAAAGACAGCATTTGAA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAAGAAACAGACACCTTaGAGAATTTATGACTCCTTT +
Preference number: 2 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPKKQTP*RIYDSF
Trigger: AAAGGAGTCATAAATTCTCCAAGGTGTCTGTTTCTT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGCTCAAACTGCTGAATaGATGTTTCAGAGACCGAAC +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWAQTAE*MFQRPN
Trigger: GTTCGGTCTCTGAAACATCCATTCAGCAGTTTGAGC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTTTCATCAACCTAAATaGACAGGGCGAGAGTGTGGA +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWFHQPK*TGRECG
Trigger: TCCACACTCTCGCCCTGTCCATTTAGGTTGATGAAA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTGGAATCCATATTGTTaGCATTTTTCCACAATGGAC +
Preference number: 2 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFWNPYC*HFSTMD
Trigger: GTCCATTGTGGAAAAATGGCAACAATATGGATTCCA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGCCATTTTTCCACAATaGACATGTTCACTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWAIFPQ*TCSLSQ
Trigger: TTGGCTGAGTGAACATGTCCATTGTGGAAAAATGGC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGACAATAAATGCTGAATaGACGAATAATGGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWTINAE*TNNGAS
Trigger: TGAGGCTCCATTATTCGTTCATTCAGCATTTATTGT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGACCTTGGAGAATTTATaGCTCCTTTCTCTATGTCAT +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWTLENL*LLSLCH
Trigger: ATGACATAGAGAAAGGAGTCATAAATTCTCCAAGGT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGGAATCCATATTGTTaGCATTTTTCCACAATGGAC +
Preference number: 2 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWWNPYC*HFSTMD
Trigger: GTCCATTGTGGAAAAATGGCAACAATATGGATTCCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp TGGAGCAGCGGCCCTCCATCTCACTCTGTCCTCAGGTaGCCCGGGCCTTGCTGGAGTCCCAGCTGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: WSSGPPSHSVLR*PGPCWSPSWQG
Trigger: GCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTGAGATGGAGGGCCGCTGCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GACACTGGTGAGCAGAGGCGGCCAGTGGGACACCCGTaGAGGGAAGCAGGCAAATGCAGGGACCAGCCACCC +
Preference number: 3 (lower is better)
Translates to: DTGEQRRPVGHP*REAGKCRDQPP
Trigger: GGGTGGCTGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGCTCACCAGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGCGGGAGTTGGGAGCTaGTTGGTGGCTGCGTGCATA +
Preference number: 3 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSAGVGS*LVAACI
Trigger: TATGCACGCAGCCACCAACAAGCTCCCAACTCCCGC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CCATCTCACTCTGTCCTCAGGTGCCCCGGGCCTTGCTaGAGTCCCAGCTGGCAGGGCGCTAAGGCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: PSHSVLRCPGPC*SPSWQGAKAEE
Trigger: CTCTTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTGAGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAAGGCGGGCAGATGGCTaGAGCCCAGGAGTTCGTGAC +
Preference number: 3 (lower is better)
Translates to: QLTCGMQARLLEQRPSISRRADG*SPGVRD
Trigger: GTCACGAACTCCTGGGCTCAAGCCATCTGCCCGCCT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAAACTCTACGCGGGAGTaGGGAGCTTGTTGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPNSTRE*GACWWL
Trigger: CAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGTT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp TGGAGAGCCATGCAGAGGTGGAGGGCAAGATGGACCTaGATGCCATTTCAGAGTGAGGGGAGGCCCCGTGGG +
Preference number: 3 (lower is better)
Translates to: WRAMQRWRARWT*MPFQSEGRPRG
Trigger: CCCACGGGGCCTCCCCTCACTCTGAAATGGCATCCAGGTCCATCTTGCCCTCCACCTCTGCATGGCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp TGGACAGGGCGAGAGTGTGGACCCAGTGCTAGGATCTaGGAGAGGCGATGGGGCATGGAGAGCCATGCAGAG +
Preference number: 3 (lower is better)
Translates to: WTGRECGPSARI*ERRWGMESHAE
Trigger: CTCTGCATGGCTCTCCATGCCCCATCGCCTCTCCCAGATCCTAGCACTGGGTCCACACTCTCGCCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACCACAAACTGCTTCCTaGCTGGGACTACGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: QLTCGMQARLLEQRPSISPQTAS*LGLRFP
Trigger: GGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GAGGATCAGTGGTACCTCAGGGGGCACAAACTGCTCTaGCCCAGAAGCAGGCTGGTGCCACTCGGGGATACT +
Preference number: 3 (lower is better)
Translates to: EDQWYLRGHKLL*PRSRLVPLGDT
Trigger: AGTATCCCCGAGTGGCACCAGCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGAGGTACCACTGATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CTTTGTAAGGATCCTCTGTCCGACACAGTTGACTTGTaGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTC +
Preference number: 3 (lower is better)
Translates to: LCKDPLSDTVDL*DAGPAAGAAAL
Trigger: GAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGGACAGAGGATCCTTACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp ATGAGGTGGGAACTCCTGCCCCACCCACTTTACAGATaGGCAAGCTACCTAGGGCGGACGAGCAGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: MRWELLPHPLYR*ASYLGRTSSWP
Trigger: TGGCCAGCTGCTCGTCCGCCCTAGGTAGCTTGCTCATCTGTAAAGTGGGTGGGGCAGGAGTTCCCACCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp GGACGCTCTACCATTAGCTCCTGGGAGCGGGCTGTGTaGATTCCCCTGGGGATAGACGATAACCAGACCGCT +
Preference number: 3 (lower is better)
Translates to: GRSTISSWERAV*IPLGIDDNQTA
Trigger: AGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGGTCCTTTGCTGCTGTaGGGTGGATTATGGGCCATA +
Preference number: 3 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRGPLLL*GGLWAI
Trigger: TATGGCCCATAATCCACCCAACAGCAGCAAAGGACC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAATATCCATCATACCCTaGCATTCAGAGATCCCAGCT +
Preference number: 3 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPISIIP*HSEIPA
Trigger: AGCTGGGATCTCTGAATGCAAGGGTATGATGGATAT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GACATCCAGCTGTGTTTAGCCCTCAGCCTCTCTCCATaGAGAGGCTCATCAGACGAAAGGTGCCCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: DIQLCLALSLSP*RGSSDERCPRP
Trigger: AGGCCTGGGGCACCTTTCGTCTGATGAGCCTCTGCATGGAGAGAGGCTGAGGGCTAAACACAGCTGGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp CTCTACGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTaGATAATCGGCCTGGACACAGGCATGGTTAGATGC +
Preference number: 3 (lower is better)
Translates to: LYAGVGSLLVAA*IIGLDTGMVRC
Trigger: GCATCTAACCATGCCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp TCCCACAGGCAAGACTGGCCCACCCGGGTGACTGCCTaGTTTCATCAACCTAAATGGACAGGGCGAGAGTGT +
Preference number: 3 (lower is better)
Translates to: SHRQDWPTRVTA*FHQPKWTGREC
Trigger: ACACTCTCGCCCTGTCCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GCTTCCTGGCACACTTCAAACCATGAGACAGGAGACTaGATGTTCCTCCCACAGGCAAGACTGGCCCACCCG +
Preference number: 3 (lower is better)
Translates to: ASWHTSNHETGD*MFLPQARLAHP
Trigger: CGGGTGGGCCAGTCTTGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATGGTTTGAAGTGTGCCAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp CTGAGAGTGGAAGCTCCTGGGAGCCTGAGCTCTCTCTaGCTCTCGTTAGCTGTGGCTTTGGCCATCAACTGG +
Preference number: 3 (lower is better)
Translates to: LRVEAPGSLSSL*LSLAVALAINW
Trigger: CCAGTTGATGGCCAAAGCCACAGCTAACGAGAGGCAGAGAGAGCTCAGGCTCCCAGGAGCTTCCACTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CCCACCCGGGTGACTGCCTGCTTTCATCAACCTAAATaGACAGGGCGAGAGTGTGGACCCAGTGCTAGGATC +
Preference number: 3 (lower is better)
Translates to: PTRVTACFHQPK*TGRECGPSARI
Trigger: GATCCTAGCACTGGGTCCACACTCTCGCCCTGTCCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp AGACAGGAGACTGCATGTTCCTCCCACAGGCAAGACTaGCCCACCCGGGTGACTGCCTGCTTTCATCAACCT +
Preference number: 3 (lower is better)
Translates to: RQETACSSHRQD*PTRVTACFHQP
Trigger: AGGTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGAGGAACATGCAGTCTCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp CTTCCTGAGCTCAGGGGAGCTCCAGCCCAGCTGCTCTaGAGAATCCTACGTGCTAACAGCTCCCCACTGATA +
Preference number: 3 (lower is better)
Translates to: LPELRGAPAQLL*RILRANSSPLI
Trigger: TATCAGTGGGGAGCTGTTAGCACGTAGGATTCTTCAGAGCAGCTGGGCTGGAGCTCCCCTGAGCTCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp GTGTCAGACGGCACCTCAATGTGTTCTTCAGGACCCTaGAGCCAGAAGCCTCTAGCCTACCCCCAGGAGGTA +
Preference number: 3 (lower is better)
Translates to: VSDGTSMCSSGP*SQKPLAYPQEV
Trigger: TACCTCCTGGGGGTAGGCTAGAGGCTTCTGGCTTCAGGGTCCTGAAGAACACATTGAGGTGCCGTCTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp CCCAACGAAGCCCCTCTCCAGGATTATTGGAGAGACTaGGCCCAAAAGGCTAGTGGCTGGGAGGCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PNEAPLQDYWRD*AQKASGWEASA
Trigger: AGCAGAAGCCTCCCAGCCACTAGCCTTTTGGGCTCAGTCTCTCCAATAATCCTGGAGAGGGGCTTCGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GCTAGTGGCTGGGAGGCTTCTGCTCCTGTTCTCCTTTaGCTGGTCCTTTGCTGCTGTTGGGTGGATTATGGG +
Preference number: 3 (lower is better)
Translates to: ASGWEASAPVLL*LVLCCCWVDYG
Trigger: CCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCCACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp ATAATGGAGCCTCAAGGACGCTCTACCATTAGCTCCTaGGAGCGGGCTGTGTGGATTCCCCTGGGGATAGAC +
Preference number: 3 (lower is better)
Translates to: IMEPQGRSTISS*ERAVWIPLGID
Trigger: GTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGAGCGTCCTTGAGGCTCCATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp CTCACTCCACTCACCTCCCAGCACTTACCCACAAACTaGTTCCTTGCTGGGACTACGCTTTCCCCAACCACA +
Preference number: 3 (lower is better)
Translates to: LTPLTSQHLPTN*FLAGTTLSPTT
Trigger: TGTGGTTGGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGGGTAAGTGCTGGGAGGTGAGTGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATGGGGTTTCACCATGTaGGCCAGGCTGGCTCAAACT +
Preference number: 3 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPWGFTM*ARLAQT
Trigger: AGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCCA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GAGGACAAAGGCAGCTGCCCTGGAGATAGTAGGCAATaGCCATCAGGACATTTACTGGCATGGGCTCAAAGG +
Preference number: 3 (lower is better)
Translates to: EDKGSCPGDSRQ*PSGHLLAWAQR
Trigger: CCTTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGCAGCTGCCTTTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp GTGTCCTCGGCACTAGCGGTTAAGTTCCTTCATGGCTaGGGCCATGCCGCATGCAATTTATCTTGGTATCCC +
Preference number: 3 (lower is better)
Translates to: VSSALAVKFLHG*GHAACNLSWYP
Trigger: GGGATACCAAGATAAATTGCATGCGGCATGGCCCCAGCCATGAAGGAACTTAACCGCTAGTGCCGAGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CACCTCCCAGCACTTACCCACAAACTGCTTCCTTGCTaGGACTACGCTTTCCCCAACCACAATCCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: HLPALTHKLLPC*DYAFPNHNPSA
Trigger: AGCTGAAGGATTGTGGTTGGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGGGTAAGTGCTGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CCTTTGCCTGGTCCTTTGCTGCTGTTGGGTGGATTATaGGCCATACACCATCTGGGACACAGAGCTTTGGTG +
Preference number: 3 (lower is better)
Translates to: PLPGPLLLLGGL*AIHHLGHRALV
Trigger: CACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CTGTTCTCCTTTGCCTGGTCCTTTGCTGCTGTTGGGTaGATTATGGGCCATACACCATCTGGGACACAGAGC +
Preference number: 3 (lower is better)
Translates to: LFSFAWSFAAVG*IMGHTPSGTQS
Trigger: GCTCTGTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGCTGCCCAGGCTGGATaGCAATGGTACCATTATAGC +
Preference number: 3 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPAAQAG*QWYHYS
Trigger: GCTATAATGGTACCATTGCAATCCAGCCTGGGCAGC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCGCAGGAAGAGTGCATaGTGGTATCCTGTACTCTGG +
Preference number: 3 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCRRKSA*WYPVLW
Trigger: CCAGAGTACAGGATACCACAATGCACTCTTCCTGCG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp GGAGCAGATGGGAACATGTGCTCTACGCAGGAAGAGTaGATTGTGGTATCCTGTACTCTGGGCGTCAAACAG +
Preference number: 3 (lower is better)
Translates to: GADGNMCSTQEE*IVVSCTLGVKQ
Trigger: CTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAGAGCACATGTTCCCATCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp TCTAGGGAAGCAAGCTGGCGCTCACCGATTTTGGTTTaGCAGGCATATCAGAAGGCACTTTGTGACAGGTGC +
Preference number: 3 (lower is better)
Translates to: SREASWRSPILV*QAYQKALCDRC
Trigger: GCACCTGTCACAAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CTTCATGGCTGGGGCCATGCCGCATGCAATTTATCTTaGTATCCCAAATGCCCGCCACATAGTAGGTGCACA +
Preference number: 3 (lower is better)
Translates to: LHGWGHAACNLS*YPKCPPHSRCT
Trigger: TGTGCACCTACTATGTGGCGGGCATTTGGGATACCAAGATAAATTGCATGCGGCATGGCCCCAGCCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp AGGCCAGCAGAGCTAGAATTCAAGGTTCCTGAGGAATaGGAGCAGATGGGAACATGTGCTCTACGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RPAELEFKVPEE*EQMGTCALRRK
Trigger: CTTCCTGCGTAGAGCACATGTTCCCATCTGCTCCCATTCCTCAGGAACCTTGAATTCTAGCTCTGCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp AGAGAGCAATACCTAATAGCAGGGAAAGAGGATCAGTaGTACCTCAGGGGGCACAAACTGCTCTGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: REQYLIAGKEDQ*YLRGHKLLCPR
Trigger: TCTGGGGCAGAGCAGTTTGTGCCCCCTGAGGTACCACTGATCCTCTTTCCCTGCTATTAGGTATTGCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCCTTTGCCTGGTCCTTaGCTGCTGTTGGGTGGATTA +
Preference number: 3 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFPLPGP*LLLGGL
Trigger: TAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCGCAGGAAGAGTGCATaGTGGTATCCTGTACTCTGG +
Preference number: 3 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFRRKSA*WYPVLW
Trigger: CCAGAGTACAGGATACCACAATGCACTCTTCCTGCG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp CAAAATATATACACACAAATTAGCCGGGCACAGTGGTaGACGCCTGTAGTTCTAGCCACTGGCAGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: QNIYTQISRAQW*TPVVLATGRLR
Trigger: CCTCAGCCTGCCAGTGGCTAGAACTACAGGCGTGCACCACTGTGCCCGGCTAATTTGTGTGTATATATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGGGGTTTCACCATGTaGGCCAGGCTGGCTCAAACT +
Preference number: 3 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWWGFTM*ARLAQT
Trigger: AGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCCACAAACTGCTTCCTaGCTGGGACTACGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWPQTAS*LGLRFP
Trigger: GGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGAGTTGGGAGCTTGTaGGTGGCTGCGTGCATAATC +
Preference number: 3 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGVGSL*VAACII
Trigger: GATTATGCACGCAGCCACCAACAAGCTCCCAACTCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CTACAAAATATATACACACAAATTAGCCGGGCACAGTaGTGCACGCCTGTAGTTCTAGCCACTGGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: LQNIYTQISRAQ*CTPVVLATGRL
Trigger: CAGCCTGCCAGTGGCTAGAACTACAGGCGTGCACCACTGTGCCCGGCTAATTTGTGTGTATATATTTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp TGTCTTCTAGGGAAGCAAGCTGGCGCTCACCGATTTTaGTTTGCCAGGCATATCAGAAGGCACTTTGTGACA +
Preference number: 3 (lower is better)
Translates to: CLLGKQAGAHRF*FARHIRRHFVT
Trigger: TGTCACAAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGCAACTAGCAACTTCTaGACCTACAGTAAGTGGCTC +
Preference number: 3 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFATSNF*TYSKWL
Trigger: GAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTGC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATATTTACACACACTCTaGAAGCTCTTGGCATTCAGC +
Preference number: 3 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPYLHTL*KLLAFS
Trigger: GCTGAATGCCAAGAGCTTCAAGAGTGTGTGTAAATA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp CCTCGACATTTCTCTCTTCCTATAAATGAACTCAGGTaGCATCCAGCTGTGTTTAGCCCTCAGCCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: PRHFSLPINELR*HPAVFSPQPLS
Trigger: GGAGAGAGGCTGAGGGCTAAACACAGCTGGATGTCACCTGAGTTCATTTATAGGAAGAGAGAAATGTCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp AACAGGAGCAATCACAGGGCTGTGGTGAGAATCACATaGGGTGACACATGTGAAATGGTCCTTTCCCCTAAG +
Preference number: 3 (lower is better)
Translates to: NRSNHRAVVRIT*GDTCEMVLSPK
Trigger: CTTAGGGGAAAGGACCATTTCACATGTGTCACCTCATGTGATTCTCACCACAGCCCTGTGATTGCTCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp CATACCCTTGCATTCAGAGATCCCAGCTCAAACTGCTaGATGGATGTTTCAGAGACCGAACACCACCCTTTT +
Preference number: 3 (lower is better)
Translates to: HTLAFRDPSSNC*MDVSETEHHPF
Trigger: AAAAGGGTGGTGTTCGGTCTCTGAAACATCCATTCAGCAGTTTGAGCTGGGATCTCTGAATGCAAGGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp TCCACAATGGACATGTTCACTCAGCCAAGTACTTCCTaGGCTCCTGAGAGACGCCAAATATGGGAACACATA +
Preference number: 3 (lower is better)
Translates to: STMDMFTQPSTS*APERRQIWEHI
Trigger: TATGTGTTCCCATATTTGGCGTCTCTCAGGAGCTCAGGAAGTACTTGGCTGAGTGAACATGTCCATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp AACTCCGCAACTAGCAACTTCTTGACCTACAGTAAGTaGCTCGACCTTCCTGCTAGAAACTCTTACCAGATC +
Preference number: 3 (lower is better)
Translates to: NSATSNFLTYSK*LDLPARNSYQI
Trigger: GATCTGGTAAGAGTTTCTAGCAGGAAGGTCGAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTGCGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp ATTCTTCAAACACTGGCTTCAGAGCCTCTTTTCAAATaGTGTCTTTGGACCTCAGACCCTGAAGTCACAGCA +
Preference number: 3 (lower is better)
Translates to: ILQTLASEPLFK*CLWTSDPEVTA
Trigger: TGCTGTGACTTCAGGGTCTGAGGTCCAAAGACAGCATTTGAAAAGAGGCTCTGAAGCCAGTGTTTGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp GGTATCCTGTACTCTGGGCGTCAAACAGTTATTTATTaGAAGCTAGGGAAAGGTCACAGAATGCATGGTAGG +
Preference number: 3 (lower is better)
Translates to: GILYSGRQTVIY*KLGKGHRMHGR
Trigger: CCTACCATGCATTCTGTGACCTTTCCCTAGCTTCCAATAAATAACTGTTTGACGCCCAGAGTACAGGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp CTACGCAGGAAGAGTGCATTGTGGTATCCTGTACTCTaGGCGTCAAACAGTTATTTATTGGAAGCTAGGGAA +
Preference number: 3 (lower is better)
Translates to: LRRKSALWYPVL*ASNSYLLEARE
Trigger: TTCCCTAGCTTCCAATAAATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CCA 72 bp ATGGGAACATGTGCTCTACGCAGGAAGAGTGCATTGTaGTATCCTGTACTCTGGGCGTCAAACAGTTATTTA +
Preference number: 3 (lower is better)
Translates to: MGTCALRRKSAL*YPVLWASNSYL
Trigger: TAAATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAGAGCACATGTTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTCAAACAGTTATTTATaGGAAGCTAGGGAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWSNSYL*EARERS
Trigger: TGACCTTTCCCTAGCTTCCAATAAATAACTGTTTGA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp ATTATTTATAAAACAGGAGCAATCACAGGGCTGTGGTaGGAATCACATGAGGTGACACATGTGAAATGGTCC +
Preference number: 3 (lower is better)
Translates to: IIYKTGAITGLW*ESHEVTHVKWS
Trigger: GGACCATTTCACATGTGTCACCTCATGTGATTCTCACCACAGCCCTGTGATTGCTCCTGTTTTATAAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR TCA 72 bp ACGCCAAATATGGGAACACATATTACTTCTATAATCTaGAAAGGCAAACACCGGAGGAAGAGAGCAATACCT +
Preference number: 3 (lower is better)
Translates to: TPNMGTHITSII*KGKHRRKRAIP
Trigger: AGGTATTGCTCTCTTCCTCCGGTGTTTGCCTTTTCAGATTATAGAAGTAATATGTGTTCCCATATTTGGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR GCA 72 bp AACAAAAGCAAGAAAGAAGTATATCCATCATACCCTTaGATTCAGAGATCCCAGCTCAAACTGCTGAATGGA +
Preference number: 3 (lower is better)
Translates to: NKSKKEVYPSYP*IQRSQLKLLNG
Trigger: TCCATTCAGCAGTTTGAGCTGGGATCTCTGAATGCAAGGGTATGATGGATATACTTCTTTCTTGCTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGGGCTCGGCCCCGGCTaGGGACGCAGCGAACGAACG +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPGLGPG*GRSERT
Trigger: CGTTCGTTCGCTGCGTCCCCAGCCGGGGCCGAGCCC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGCGAGCACCAGGGTGTaGAGGGGCTGCGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPASTRV*RGCGAG
Trigger: GCCAGCGCCGCAGCCCCTCCACACCCTGGTGCTCGC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGCCACTTGGCGCGCGTaGCGCGGGAGCACAGGACGA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPATWRA*RGSTGR
Trigger: TCGTCCTGTGCTCCCGCGGCACGCGCGCCAAGTGGC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCCGTGCCGCAGGCGGTaGGCAGGAACTGGGCGAATT +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSPCRRR*AGTGRI
Trigger: AATTCGCCCAGTTCCTGCTCACCGCCTGCGGCACGG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACCTCGAACCTGTCCATaGGCGGGTACCGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISPRTCP*AGTAAP
Trigger: CGGCGCCGCGGTACCCGCTCATGGACAGGTTCGAGG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGCCACTTGGCGCGCGTaGCGCGGGAGCACAGGACGA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPATWRA*RGSTGR
Trigger: TCGTCCTGTGCTCCCGCGGCACGCGCGCCAAGTGGC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACCATGGGGGTGCTGCTaGCAAGGGGCGAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPPWGCC*QGASPR
Trigger: CCGAGGACTCGCCCCTTGGCAGCAGCACCCCCATGG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCAGGGCCGGCTTCCCTaGGTCCTGCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSQGRLP*VLLLFL
Trigger: GAGGAAGAGGAGCAGGACCCAGGGAAGCCGGCCCTG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATGCCCCGGGCCTTGCTaGAGTCCCAGCTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISCPGPC*SPSWQG
Trigger: GCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAACGCCATGGGGGTGCTaGTGCCAAGGGGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPTPWGC*CQGASP
Trigger: AGGACTCGCCCCTTGGCAGCAGCACCCCCATGGCGT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCCCACGGGCTTTCCGTaGTCGCAGCGCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPPTGFP*SQRSRT
Trigger: TGTGCGGCTGCGCTGCGACCACGGAAAGCCCGTGGG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCGACCAGCGGGTCTATaGCCAGGCAGGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPRPAGL*PGRPGS
Trigger: GCTCCCAGGCCTGCCTGGCCATAGACCCGCTGGTCG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGTCCTCGGGAGAGAGTaGCAGGGCCGGCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISVLGRE*QGRLPW
Trigger: CCAGGGAAGCCGGCCCTGCCACTCTCTCCCGAGGAC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGACGAGCTGAAGAGGTaGGAGGGGCACAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSDELKR*EGHSVE
Trigger: CTCCACGCTGTGCCCCTCCCACCTCTTCAGCTCGTC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGGGCGGACGAGCAGCTaGCCAGCCCCCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRGRTSS*PAPNPA
Trigger: AGCAGGGTTGGGGGCTGGCCAGCTGCTCGTCCGCCC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCCGTGCCGCAGGCGGTaGGCAGGAACTGGGCGAATT +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPPCRRR*AGTGRI
Trigger: AATTCGCCCAGTTCCTGCTCACCGCCTGCGGCACGG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGGTGGAAAGATGGCTTaGGCCTGGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSGGKMA*AWEVEA
Trigger: AGCCTCGACCTCCCAGGCTCAAGCCATCTTTCCACC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGCCTCCGAGATGGCCTaGTCTTCCAGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPASEMA*SSSRSR
Trigger: CCTGGACCTGCTGGAAGAGCAGGCCATCTCGGAGGC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTCGGGACAGCGGACCTaGCAGTCCCGGAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSGQRT*QSRNLS
Trigger: GGACAGGTTCCGGGACTGGCAGGTCCGCTGTCCCGA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTCAGGGGGCACAAACTaGTCTGCCCCAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSSGGTN*SAPEAG
Trigger: GCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCTCGTAGGGCGTGTGTaGGTCTGTGAGGACCATGGC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSLVGRV*VCEDHG
Trigger: GCCATGGTCCTCACAGACCCACACACGCCCTACGAG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGATCTGGGCGGTCCCTaGGGAGCCGCCCTCATGCAC +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRDLGGP*GAALMH
Trigger: GTGCATGAGGGCGGCTCCCCAGGGACCGCCCAGATC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTGCAGGCCCGGCTGCTaGAGCAGCGGCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRCRPGC*SSGPPS
Trigger: AGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACAGGACCCCATGAGGTaGGAACTCCTGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPQDPMR*ELLPHP
Trigger: TGGGTGGGGCAGGAGTTCCCACCTCATGGGGTCCTG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCCCAGTGCTAGGATCTaGGAGAGGCGATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSPSARI*ERRWGM
Trigger: CATGCCCCATCGCCTCTCCCAGATCCTAGCACTGGG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATCCCACAGGCAAGACTaGCCCACCCGGGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSHRQD*PTRVTA
Trigger: GGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGGCTTGGGCAGGTGGTaGACGGTCACCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSGLGRW*TVTSYS
Trigger: GGAATATGAGGTGACCGTTCACCACCTGCCCAAGCC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGTCCCACAGGCTGCCTaGGCTCATGCATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISVPQAA*AHAWRG
Trigger: ACCACGCCATGCATGAGCTCAGGCAGCCTGTGGGAC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGGTCGGCTGAGTAGATaGTCCAGACCTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSGRLSR*SRPSWA
Trigger: AGCCCAGGAAGGTCTGGATCATCTACTCAGCCGACC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCCGGGAGGCAAGGTCTaGGAGTGGAAGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPPGGKV*EWKLLG
Trigger: TCCCAGGAGCTTCCACTCTCAGACCTTGCCTCCCGG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTGGGGTCCCACAGGCTaGCTGAGCTCATGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPWGPTG*LSSCMA
Trigger: CGCCATGCATGAGCTCAGGCAGCCTGTGGGACCCCA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACCAGGTCATGACTCCTaGCTCCGAGATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPPGHDS*LRDGLL
Trigger: GAGCAGGCCATCTCGGAGGCAGGAGTCATGACCTGG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAGCAGACTACGTAGGTaGCGAAGCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSSRLRR*RSRLAS
Trigger: AGAGGCCAGCCTGCTTCGGCACCTACGTAGTCTGCT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTCGGGACAGCGGACCTaGCAGTCCCGGAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRSGQRT*QSRNLS
Trigger: GGACAGGTTCCGGGACTGGCAGGTCCGCTGTCCCGA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTTCCAGCTTTGCCACTaGTGCTCCTCCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSFQLCH*CSSFLP
Trigger: GGGGAGGAAGGAGGAGCAGCAGTGGCAAAGCTGGAA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATGCCTTTCCCGTGCATaGTCACAACCCTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPCLSRA*SQPWAG
Trigger: GCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGCA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGCCAGCCCCCAACCCTaGTGCCTCTTCTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSASPQP*CLFFVR
Trigger: CCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCTGGC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGACTGTCAGGCCCTCTaGCCCTTCCCTCGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISDCQAL*PFPRHS
Trigger: GCTGTGACGAGGGAAGGGGCAGAGGGCCTGACAGTC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGTCAGGTTTCGAGGGTaGATCCAGCTGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSVRFRG*IQLSSR
Trigger: CCTGGATGACAGCTGGATTCACCCTCGAAACCTGAC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACGCCACCGCCTGTGGTaGTGCCTCAGTTTGGACAGA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISRHRLW*CLSLDR
Trigger: TCTGTCCAAACTGAGGCATCACCACAGGCGGTGGCG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGAGGGGGTGGTCGGCTaGGTAGATGATCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPEGVVG*VDDPDL
Trigger: AAGGTCTGGATCATCTACTCAGCCGACCACCCCCTC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCCTCGAACCTGTCCATaGGCGGGTACCGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRPRTCP*AGTAAP
Trigger: CGGCGCCGCGGTACCCGCTCATGGACAGGTTCGAGG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTGTTCTTCAGGACCCTaGAGCCAGAAGCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSCSSGP*SQKPLA
Trigger: GGCTAGAGGCTTCTGGCTTCAGGGTCCTGAAGAACA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACCAGGTCATGACTCCTaGCTCCGAGATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISPGHDS*LRDGLL
Trigger: GAGCAGGCCATCTCGGAGGCAGGAGTCATGACCTGG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCAGTGCCAGCCGGACTaGGGCACCGTCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYQCQPD*GTVSQG
Trigger: CCCCTGGCTGACGGTGCCGCAGTCCGGCTGGCACTG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCAAGCCTTCGAGGTaGTCCCTCACGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSIKPSR*SLTSSG
Trigger: TCCAGAGGACGTGAGGGAGCACCTCGAAGGCTTGAT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTGGCGGAAAAGCAGCTaGCGCTGGAGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRWRKSS*RWRLLR
Trigger: CCTGAGGAGCCTCCAGCGGCAGCTGCTTTTCCGCCA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGATGCAGGCCCGGCTaGTGGAGCAGCGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGCRPG*WSSGPP
Trigger: TGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGCCACTCGGGGATACTaGAGGCTTGCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRATRGY*RLARTP
Trigger: TGGGGTCCTGGCAAGCCTGCAGTATCCCCGAGTGGC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGGTCCCCATCAGGGATaGGCTTGGGCAGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPGPHQG*AWAGGE
Trigger: TTCACCACCTGCCCAAGCCCATCCCTGATGGGGACC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCTGGTGGAACTCTTCTaGTCTGGGCGCAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSLVELF*SGRRYV
Trigger: CACATACCTGCGCCCAGACCAGAAGAGTTCCACCAG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATCCCGGAGGCAGCAGTaGCTCCTCAAACACCTCTTC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSRRQQ*LLKHLF
Trigger: GAAGAGGTGTTTGAGGAGCCACTGCTGCCTCCGGGA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACTCCCTCACGTCCTCTaGAAGGAGGTCAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISLPHVL*KEVRRR
Trigger: GCGTCTCCTGACCTCCTTCCAGAGGACGTGAGGGAG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCTCGTAGGGCGTGTGTaGGTCTGTGAGGACCATGGC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPLVGRV*VCEDHG
Trigger: GCCATGGTCCTCACAGACCCACACACGCCCTACGAG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGCTGCGGGGAGCTCCTaGAGATGTAGCCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRAAGSS*RCSPGQ
Trigger: CTGACCAGGGCTACATCTCCAGGAGCTCCCCGCAGC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTGCCCCGGGCCTTGCTaGAGTCCCAGCTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRCPGPC*SPSWQG
Trigger: GCCCTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCTTTCTTTTCCGCGGTaGAGTTCGAGTCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSLSFPR*SSSRLH
Trigger: GTGGAGCCGACTCGAACTCCACCGCGGAAAAGAAAG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGGCAGGTACTATTCTTaGCCGTGCAGTTTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPGRYYS*PCSLAP
Trigger: CGGGGCTAAACTGCACGGTCAAGAATAGTACCTGCC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGACCATCTCCTGCTTCTaGCGGCCCACCCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRTISCF*RPTQVM
Trigger: CATGACCTGGGTGGGCCGTCAGAAGCAGGAGATGGT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAAGCAGGCTGGCCTCTTaGAGTCCGGGAGGATCATGT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSRLAS*SPGGSC
Trigger: ACATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTCATCCAGGCTGCAGTaGAATGGCACAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSSSRLQ*NGTISA
Trigger: AGCCGAGATTGTGCCATTGCACTGCAGCCTGGATGA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGGGCACAAACTGCTCTaGCCCAGAAGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRGHKLL*PRSRLV
Trigger: CACCAGCCTGCTTCTGGGGCAGAGCAGTTTGTGCCC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAAGCCTGAGCTCTCTCTaGCTCTCGTTAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSLSSL*LSLAVA
Trigger: AGCCACAGCTAACGAGAGGCAGAGAGAGCTCAGGCT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCAGTTTAGCCCCGGCTaGGAGCAGACCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYQFSPG*EQTSAR
Trigger: CCGGGCGCTGGTCTGCTCCCAGCCGGGGCTAAACTG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATGGGCAAAGTGCAGCTaGATCTGCAGGTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPWAKCS*ICRSFG
Trigger: CCCAAAGGACCTGCAGATCCAGCTGCACTTTGCCCA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACTTGGACTGGTGGTTTaGGTCCCCATCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISLGLVV*VPIRDG
Trigger: CCCATCCCTGATGGGGACCCAAACCACCAGTCCAAG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGGCTGGATCTGCACTTaGTGGCGACAGCACCCTTTA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPGWICT*WRQHPL
Trigger: TAAAGGGTGCTGTCGCCACCAAGTGCAGATCCAGCC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCCTGGGCTTCAGCGGTaGGGGGATCAGGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRPGLQR*GDQVSR
Trigger: GCGGCTGACCTGATCCCCCCACCGCTGAAGCCCAGG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTCCCGGAGGCAGCAGTaGCTCCTCAAACACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSRRQQ*LLKHLF
Trigger: GAAGAGGTGTTTGAGGAGCCACTGCTGCCTCCGGGA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCAGGGGTTATTCCTCCTaGGAAGGACTCCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPRGYSS*EGLQGE
Trigger: CTCCCCCTGGAGTCCTTCCCAGGAGGAATAACCCCT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCCCCGGGGCTGCAGGTaGGGTTCCAGCTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRPRGCR*GSSFAT
Trigger: AGTGGCAAAGCTGGAACCTCACCTGCAGCCCCGGGG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACCAGCCCAGCTGCTCTaGAGAATCCTACGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISPAQLL*RILRAN
Trigger: GTTAGCACGTAGGATTCTTCAGAGCAGCTGGGCTGG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGGCAGGAAAAAGTCATaGAACTCTACGCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSGRKKS*NSTREL
Trigger: CAACTCCCGCGTAGAGTTTCATGACTTTTTCCTGCC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCCCAGCTCAAACTGCTaGATGGATGTTTCAGAGACC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSPSSNC*MDVSET
Trigger: GGTCTCTGAAACATCCATTCAGCAGTTTGAGCTGGG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCAGCCAAGTACTTCCTaGGCTCCTGAGAGACGCCAA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPQPSTS*APERRQ
Trigger: TTGGCGTCTCTCAGGAGCTCAGGAAGTACTTGGCTG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCACCTAGGCCTTGCCTaGGTCTGGCCATGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRHLGLA*VWPCSS
Trigger: AGAACTGCATGGCCAGACTCAGGCAAGGCCTAGGTG...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCCCCTACGCGGTGCATaGGGCCCGGCTGGAACATCT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRPLRGA*GPAGTS
Trigger: AGATGTTCCAGCCGGGCCGCATGCACCGCGTAGGGG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTTCCAGCTTTGCCACTaGTGCTCCTCCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRFQLCH*CSSFLP
Trigger: GGGGAGGAAGGAGGAGCAGCAGTGGCAAAGCTGGAA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGACGCCATGGGGGTGCTaGTGCCAAGGGGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRTPWGC*CQGASP
Trigger: AGGACTCGCCCCTTGGCAGCAGCACCCCCATGGCGT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGAGACGCCATGGGGGTaGTGCTGCCAAGGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRETPWG*CCQGAS
Trigger: ACTCGCCCCTTGGCAGCAGCACCCCCATGGCGTCTC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATGGCAGCTCAGACTCTaGTCGAAGAGCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISWQLRL*SKSESI
Trigger: GATGCTCTCGCTCTTCGAGCAGAGTCTGAGCTGCCA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACACAAACTGCTTCCTTaGTGGGACTACGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPHKLLP*WDYAFP
Trigger: GGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCACTTACCCACAAACTaGTTCCTTGCTGGGACTACG +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSHLPTN*FLAGTT
Trigger: CGTAGTCCCAGCAAGGAAGCAGTTTGTGGGTAAGTG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGCAGATGGGAACATGTaGTCTACGCAGGAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPADGNM*STQEEC
Trigger: GCACTCTTCCTGCGTAGAGCACATGTTCCCATCTGC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAAACCGGAACCACCTCTaGACACTCAGGAGACGAGCT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISNRNHL*TLRRRA
Trigger: AGCTCGTCTCCTGAGTGTGCAGAGGTGGTTCCGGTT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGAGCTTGTTGGTGGCTaGGTGCATAATCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISELVGG*VHNRPG
Trigger: TCCAGGCCGATTATGCACGCAGCCACCAACAAGCTC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGCCAGCCCCCAACCCTaGTGCCTCTTCTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRASPQP*CLFFVR
Trigger: CCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCTGGC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGCACAAGGAAATTCTTaGACTGGTGGTTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSAQGNS*TGGLGP
Trigger: GGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACTGGGCGCAGGTATGTaGTGCATGTGCTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPLGAGM*CMCSKQ
Trigger: TTGCTTTGAGCACATGCACCACATACCTGCGCCCAG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCACGTTGGATCGCTGGTaGAACTCTTCTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPTLDRW*NSSGLG
Trigger: GCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGCTGGATCTGCACTTaGTGGCGACAGCACCCTTTA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGWICT*WRQHPL
Trigger: TAAAGGGTGCTGTCGCCACCAAGTGCAGATCCAGCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGCGGTGAGCAGGAACTaGGCGAATTTCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRAVSRN*ANFRTT
Trigger: CGTGGTCCTGAAATTCGCCCAGTTCCTGCTCACCGC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGTCAGGAGACGCCATaGGGGTGCTGCTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGQETP*GCCCQG
Trigger: CCCTTGGCAGCAGCACCCCCATGGCGTCTCCTGACC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATCTACCATTAGCTCCTaGGAGCGGGCTGTGTGGATT +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSTISS*ERAVWI
Trigger: AATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCCTGTTGGGTGGATTATaGGCCATACACCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSLLGGL*AIHHLG
Trigger: TCCCAGATGGTGTATGGCCCATAATCCACCCAACAG...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCACTGGGCCCAGGAAATaGGGAGGGAATGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPTGPRK*GGNVRR
Trigger: TCTCCTCACATTCCCTCCCCATTTCCTGGGCCCAGT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAATTAGCCGGGCACAGTaGTGCACGCCTGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPISRAQ*CTPVVL
Trigger: TAGAACTACAGGCGTGCACCACTGTGCCCGGCTAAT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGGGCGGACGAGCAGCTaGCCAGCCCCCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCGRTSS*PAPNPA
Trigger: AGCAGGGTTGGGGGCTGGCCAGCTGCTCGTCCGCCC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGATCTGGGAGAGGCGATaGGGCATGGAGAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRIWERR*GMESHA
Trigger: TGCATGGCTCTCCATGCCCCATCGCCTCTCCCAGAT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGAGAGTGGAAGCTCCTaGGAGCCTGAGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRESGSS*EPELSL
Trigger: CAGAGAGAGCTCAGGCTCCCAGGAGCTTCCACTCTC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGGCTGCAGTGAGCCATaGTTGCACCACTGTAATACA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPGCSEP*LHHCNT
Trigger: TGTATTACAGTGGTGCAATCATGGCTCACTGCAGCC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGACCTTCATCCTGGCGTaGTCACAGTCAGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRTFILA*SQSGTR
Trigger: CCTTGTGCCTGACTGTGAGCACGCCAGGATGAAGGT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGCCTCCGAGATGGCCTaGTCTTCCAGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYASEMA*SSSRSR
Trigger: CCTGGACCTGCTGGAAGAGCAGGCCATCTCGGAGGC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGATCATGTTCATGGCTaGAGTGAACAGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISDHVHG*SEQVPH
Trigger: GTGGGGGACCTGTTCACTGCAGCCATGAACATGATC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACACTTACCCACAAACTaGTTCCTTGCTGGGACTACG +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPHLPTN*FLAGTT
Trigger: CGTAGTCCCAGCAAGGAAGCAGTTTGTGGGTAAGTG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGAGGACAAAGGCAGCTaGCCTGGAGATAGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISEDKGS*PGDSRQ
Trigger: TTGCCTACTATCTCCAGGGCAGCTGCCTTTGTCCTC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCAGCCCCCAACCCTGCTaGCTCTTCTTTGTAAGGATC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSPQPC*LFFVRI
Trigger: GATCCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTCTTCCTCCCACATCTaGACTGCTCCAGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSSSHI*TAPGNL
Trigger: AAGGTTGCCTGGAGCAGTGCAGATGTGGGAGGAAGA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGACTGTCAGGCCCTCTaGCCCTTCCCTCGTCACAGC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYDCQAL*PFPRHS
Trigger: GCTGTGACGAGGGAAGGGGCAGAGGGCCTGACAGTC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGTGACCCTAGCTTGCTaGTTCTGGCTGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPVTLAC*FWLCQM
Trigger: CATTTGGCACAGCCAGAAGCAGCAAGCTAGGGTCAC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATCTCCTTGTTGGGTGTaGGCAAAGTGCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSPCWV*AKCSWI
Trigger: GATCCAGCTGCACTTTGCCCACACCCAACAAGGAGA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAAGTGTCTGGCATTTCTaGGCAGGAAACAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSVWHF*AGNSRG
Trigger: TCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGAEAG*PLEVRE
Trigger: CTCCCGGACTTCAAGAGGCCAGCCTGCTTCGGCACC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCAACATCTCCAGGTCCTaGATGCGGAAGTACACCTCC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPNISRS*MRKYTS
Trigger: GGAGGTGTACTTCCGCATCCAGGACCTGGAGATGTT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGTCCTCGGGAGAGAGTaGCAGGGCCGGCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPVLGRE*QGRLPW
Trigger: CCAGGGAAGCCGGCCCTGCCACTCTCTCCCGAGGAC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACTCTGCTGCCCAGGCTaGATTGCAATGGTACCATTA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPLCCPG*IAMVPL
Trigger: TAATGGTACCATTGCAATCCAGCCTGGGCAGCAGAG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCAAAAGGCTAGTGGCTaGGAGGCTTCTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPQKASG*EASAPV
Trigger: AACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTTG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGACGAGCTGAAGAGGTaGGAGGGGCACAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRDELKR*EGHSVE
Trigger: CTCCACGCTGTGCCCCTCCCACCTCTTCAGCTCGTC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp CTTCTTTGTAAGGATCCTCTGTCCGACACAGTTGACTaGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LLCKDPLSDTVD*WDAGPAAGAAA
Trigger: GGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGGACAGAGGATCCTTACAAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAGCGAACGAACGTTCTaGGGCTTTCTTTTCCGCGGT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRSERTF*GFLFRG
Trigger: ACCGCGGAAAAGAAAGCCTCAGAACGTTCGTTCGCT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCCCAGCTCAAACTGCTaGATGGATGTTTCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPPSSNC*MDVSET
Trigger: GGTCTCTGAAACATCCATTCAGCAGTTTGAGCTGGG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGGCTGCAGTGAGCCATaGTTGCACCACTGTAATACA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPGCSEP*LHHCNT
Trigger: TGTATTACAGTGGTGCAATCATGGCTCACTGCAGCC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACACTGGCCCACCCGGGTaGCTGCCTGCTTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYTGPPG*LPAFIN
Trigger: GTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTCATTGGTGTTCAGCTaGAGGACAGATAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSSLVFS*RTDNSA
Trigger: TGCAGAGTTATCTGTCCTGCAGCTGAACACCAATGA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGCGCCCGCTTCACGATaGCGGTTCCCGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFAPASR*RFPEAA
Trigger: TGCTGCCTCCGGGAACCGGCATCGTGAAGCGGGCGC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTGGGTGCCTTTCCCGTaGATGCTCACAACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRWVPFP*MLTTLG
Trigger: GCCCAGGGTTGTGAGCATGCACGGGAAAGGCACCCA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTCAGACTCACCTTCCTaGCAGATGCTTTTACGTTTC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSSDSPS*QMLLRF
Trigger: GAAACGTAAAAGCATCTGGCAGGAAGGTGAGTCTGA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAACAGGCATGGTTAGATaGTCCGCTGCTTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISTGMVR*SAASFP
Trigger: TGGGAAAGAAGCAGCGGAGCATCTAACCATGCCTGT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTCAGGGGGCACAAACTaGTCTGCCCCAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRSGGTN*SAPEAG
Trigger: GCCTGCTTCTGGGGCAGAGCAGTTTGTGCCCCCTGA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAACATGAACAGCTTGTaGAATGGGTTTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSNMNSL*NGFRGS
Trigger: GCTACCCCTAAACCCATTGCACAAGCTGTTCATGTT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAACCCGGGTGACTGCCTaGTTTCATCAACCTAAATGG +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISTRVTA*FHQPKW
Trigger: CCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCCAGTGGGACACCCGTaGAGGGAAGCAGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRPVGHP*REAGKC
Trigger: GCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCCAGTGGGACACCCGTaGAGGGAAGCAGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYPVGHP*REAGKC
Trigger: GCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGTGACCCTAGCTTGCTaGTTCTGGCTGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRVTLAC*FWLCQM
Trigger: CATTTGGCACAGCCAGAAGCAGCAAGCTAGGGTCAC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGGTCAACCACAAAGTaGCTGAAGGTAAAACGCCAC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGSTTK*LKVKRH
Trigger: GTGGCGTTTTACCTTCAGCCACTTTGTGGTTGACCC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGCACAAGGAAATTCTTaGACTGGTGGTTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISAQGNS*TGGLGP
Trigger: GGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACCATGTGCGGAAAACTaGTCAGCAGGATCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPPCAEN*SAGSGN
Trigger: ATTACCAGATCCTGCTGACCAGTTTTCCGCACATGG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAGTGTCTGGCATTTCTaGGCAGGAAACAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRSVWHF*AGNSRG
Trigger: TCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTGGTTCTGGAGTGTCTaGCATTTCTGGGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPWFWSV*HFWAGN
Trigger: GTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACCCACGGGCTTTCCGTaGTCGCAGCGCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKPTGFP*SQRSRT
Trigger: TGTGCGGCTGCGCTGCGACCACGGAAAGCCCGTGGG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGATCTGGGCGGTCCCTaGGGAGCCGCCCTCATGCAC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKDLGGP*GAALMH
Trigger: GTGCATGAGGGCGGCTCCCCAGGGACCGCCCAGATC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCTCAAAGCTGGGATCTaGGCGGTCCCTGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCLKAGI*AVPGEP
Trigger: CGGCTCCCCAGGGACCGCCCAGATCCCAGCTTTGAG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTGGGAGCGGGCTGTGTaGATTCCCCTGGGGATAGAC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRWERAV*IPLGID
Trigger: GTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAAGGAAGAGTGCATTGTaGTATCCTGTACTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISRKSAL*YPVLWA
Trigger: CGCCCAGAGTACAGGATACCACAATGCACTCTTCCT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGGGAGGGGCACAGCGTaGAGGGCACCTGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYGRGTA*RAPVLR
Trigger: TCTAAGAACAGGTGCCCTCCACGCTGTGCCCCTCCC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTGCTGGAGTCCCAGCTaGCAGGGCGCTAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRCWSPS*QGAKAE
Trigger: TTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATGCAGGCCCGGCTGCTaGAGCAGCGGCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKCRPGC*SSGPPS
Trigger: AGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCAGGGCAAGATGGACCTaGATGCCATTTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPRARWT*MPFQSE
Trigger: CTCACTCTGAAATGGCATCCAGGTCCATCTTGCCCT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATCTCCTCCTCCTACCTaGTCACTGTGTACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSPPPT*SLCTFF
Trigger: GAAGAAGGTACACAGTGACCAGGTAGGAGGAGGAGA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGGAAAATATAGCGCGTaGTTGACTGTCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPGKYSA*LTVRPS
Trigger: AGAGGGCCTGACAGTCAACCACGCGCTATATTTTCC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTCCAGGGTCTCCACGGTaGTGTTGGGGTCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFPGSPR*CWGPTG
Trigger: GCCTGTGGGACCCCAACATCACCGTGGAGACCCTGG...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATGTAATACAGCCTGGTaGCAGAGAGACCCTGACTTA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISCNTAW*QRDPDL
Trigger: TAAGTCAGGGTCTCTCTGTCACCAGGCTGTATTACA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGCACACTTCAAACCATaGGACAGGAGACTGCATGTT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISAHFKP*DRRLHV
Trigger: AACATGCAGTCTCCTGTCTCATGGTTTGAAGTGTGC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGAATATAGCGCGTGGTTaGCTGTCAGGCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRNIARG*LSGPLP
Trigger: GGGCAGAGGGCCTGACAGTCAACCACGCGCTATATT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACCCCTACGCGGTGCATaGGGCCCGGCTGGAACATCT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKPLRGA*GPAGTS
Trigger: AGATGTTCCAGCCGGGCCGCATGCACCGCGTAGGGG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCCTTTGCCTGGTCCTTTaGTGCTGTTGGGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPLCLVL*CCWVDY
Trigger: ATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAG...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACACTCTGTCCTCAGGTaGCCCGGGCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPHSVLR*PGPCWS
Trigger: ACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTGGCCATGCAGTTCTTaGCCTAAGGAAGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPWPCSS*PKEEQE
Trigger: TTCCTGTTCTTCCTTAGGGCAAGAACTGCATGGCCA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCATCACCGATTTTGGTTTaGCAGGCATATCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPSPILV*QAYQKA
Trigger: TGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGA...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGGCTCGGCCCCGGCTaGGGACGCAGCGAACGAACG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGLGPG*GRSERT
Trigger: CGTTCGTTCGCTGCGTCCCCAGCCGGGGCCGAGCCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCAGACCAGCGCCCGGTaGTCCAGGAGTCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSQTSAR*SRSRRE
Trigger: CTCCCTGCGACTCCTGGACCACCGGGCGCTGGTCTG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCGAGGTACAGGATGCTaGCGTCTGTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRRGTGC*RLSAVS
Trigger: GGACACTGCAGACAGACGCCAGCATCCTGTACCTCG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAAATTCTTGGACTGGTaGTTTGGGTCCCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRKFLDW*FGSPSG
Trigger: CCCTGATGGGGACCCAAACCACCAGTCCAAGAATTT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCCTGGGCTTCAGCGGTaGGGGGATCAGGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFPGLQR*GDQVSR
Trigger: GCGGCTGACCTGATCCCCCCACCGCTGAAGCCCAGG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGCGAGCACCAGGGTGTaGAGGGGCTGCGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWASTRV*RGCGAG
Trigger: GCCAGCGCCGCAGCCCCTCCACACCCTGGTGCTCGC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGGTCAGGAGACGCCATaGGGGTGCTGCTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKGQETP*GCCCQG
Trigger: CCCTTGGCAGCAGCACCCCCATGGCGTCTCCTGACC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACAGGGCCGGCTTCCCTaGGTCCTGCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKQGRLP*VLLLFL
Trigger: GAGGAAGAGGAGCAGGACCCAGGGAAGCCGGCCCTG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACTCAAAGCTGGGATCTaGGCGGTCCCTGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKLKAGI*AVPGEP
Trigger: CGGCTCCCCAGGGACCGCCCAGATCCCAGCTTTGAG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGATGAGCCACTGCACCTaGCCCATTCAGCGTTTACAT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRMSHCT*PIQRLH
Trigger: ATGTAAACGCTGAATGGGCCAGGTGCAGTGGCTCAT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATTGACCTACAGTAAGTaGCTCGACCTTCCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISLTYSK*LDLPAR
Trigger: TCTAGCAGGAAGGTCGAGCCACTTACTGTAGGTCAA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAGGAATGGGAGCAGATaGGAACATGTGCTCTACGCA +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRRNGSR*EHVLYA
Trigger: TGCGTAGAGCACATGTTCCCATCTGCTCCCATTCCT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAGCTCAAACTGCTGAATaGATGTTTCAGAGACCGAAC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPAQTAE*MFQRPN
Trigger: GTTCGGTCTCTGAAACATCCATTCAGCAGTTTGAGC...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGACACAGTTGACTTGTaGGATGCAGGCCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRDTVDL*DAGPAA
Trigger: AGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGCCATTTTTCCACAATaGACATGTTCACTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSAIFPQ*TCSLSQ
Trigger: TTGGCTGAGTGAACATGTCCATTGTGGAAAAATGGC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAAGCAGAGGCGGCCAGTaGGACACCCGTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKSRGGQ*DTRAGK
Trigger: CTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGCT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGAGAGTGGAAGCTCCTaGGAGCCTGAGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYESGSS*EPELSL
Trigger: CAGAGAGAGCTCAGGCTCCCAGGAGCTTCCACTCTC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTCTAAGCAAGAACACTaGGCCTGCACCAAAATAAAC +
Preference number: 4 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSSKQEH*ACTKIN
Trigger: GTTTATTTTGGTGCAGGCCCAGTGTTCTTGCTTAGA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCAATAAATGAACTCAGGTaGCATCCAGCTGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPINELR*HPAVFS
Trigger: GCTAAACACAGCTGGATGTCACCTGAGTTCATTTAT...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTGCCCAGATCTTCACTaGCCCACCACCCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYCPDLH*PTTPHF
Trigger: GAAATGAGGGGTGGTGGGTCAGTGAAGATCTGGGCA...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCATTTACACACACTCTTaGAGCTCTTGGCATTCAGCG +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPIYTHS*SSWHSA
Trigger: CGCTGAATGCCAAGAGCTTCAAGAGTGTGTGTAAAT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTGTAATACAGCCTGGTaGCAGAGAGACCCTGACTTA +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRCNTAW*QRDPDL
Trigger: TAAGTCAGGGTCTCTCTGTCACCAGGCTGTATTACA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGGCACACTTCAAACCATaGGACAGGAGACTGCATGTT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRAHFKP*DRRLHV
Trigger: AACATGCAGTCTCCTGTCTCATGGTTTGAAGTGTGC...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCAGAGGAAGGATCCAGTaGGCGAACTCATCTTATAGT +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPRGRIQ*ANSSYS
Trigger: ACTATAAGATGAGTTCGCTCACTGGATCCTTCCTCT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGCTGTTTTCATCTTCTaGGAGAATCCCATGACACTG +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPAVFIF*ENPMTL
Trigger: CAGTGTCATGGGATTCTCTCAGAAGATGAAAACAGC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATGGGGTCCCACAGGCTaGCTGAGCTCATGCATGGCG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKWGPTG*LSSCMA
Trigger: CGCCATGCATGAGCTCAGGCAGCCTGTGGGACCCCA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTCTCCAGGTCCTGGATaGGGAAGTACACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRSPGPG*GSTPPR
Trigger: TCGAGGAGGTGTACTTCCGCATCCAGGACCTGGAGA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGCGCCCGCTTCACGATaGCGGTTCCCGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQAPASR*RFPEAA
Trigger: TGCTGCCTCCGGGAACCGGCATCGTGAAGCGGGCGC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGAGACGCCATGGGGGTaGTGCTGCCAAGGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFETPWG*CCQGAS
Trigger: ACTCGCCCCTTGGCAGCAGCACCCCCATGGCGTCTC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCAGGCGTGAGCCACCGTaGCCGGCCCATCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSRREPP*PAHPVR
Trigger: ACGAACAGGATGGGCCGGGCACGGTGGCTCACGCCT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTCAGACTCACCTTCCTaGCAGATGCTTTTACGTTTC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSDSPS*QMLLRF
Trigger: GAAACGTAAAAGCATCTGGCAGGAAGGTGAGTCTGA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGAGCTCCAGCCCAGCTaGTCTGAAGAATCCTACGTG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRELQPS*SEESYV
Trigger: CACGTAGGATTCTTCAGAGCAGCTGGGCTGGAGCTC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGAGCCTCTTTTCAAATaGTGTCTTTGGACCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPEPLFK*CLWTSD
Trigger: GTCTGAGGTCCAAAGACAGCATTTGAAAAGAGGCTC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATCTACGCAGGAAGAGTaGATTGTGGTATCCTGTACT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSTQEE*IVVSCT
Trigger: AGTACAGGATACCACAATGCACTCTTCCTGCGTAGA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATATCCATCATACCCTTaGATTCAGAGATCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISYPSYP*IQRSQL
Trigger: GAGCTGGGATCTCTGAATGCAAGGGTATGATGGATA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTCACTCTGTCCTCAGGTaGCCCGGGCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFHSVLR*PGPCWS
Trigger: ACTCCAGCAAGGCCCGGGGCACCTGAGGACAGAGTG...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCTCCCACATCTGCACTaGTCCAGGCAACCTTCGGTA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYLPHLH*SRQPSV
Trigger: TACCGAAGGTTGCCTGGAGCAGTGCAGATGTGGGAG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCCCACACCTAGGCCTTaGCTGAGTCTGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCPTPRP*LSLAMQ
Trigger: CTGCATGGCCAGACTCAGGCAAGGCCTAGGTGTGGG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCAGAGGCGGCCAGTGGGACACCCGTGCAGGGAAGCAGGCAAATGCAGGGACCACAAGAACACTGGGCCTaGACCAAAATAAACAAACAC +
Preference number: 4 (lower is better)
Translates to: AEAASGTPVQGSRQMQGPQEHWA*TKINKH
Trigger: GTGTTTGTTTATTTTGGTGCAGGCCCAGTGTTCTTG...TGGTCCCTGCATTTGCCTGCTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCTGGTGGAACTCTTCTaGTCTGGGCGCAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYLVELF*SGRRYV
Trigger: CACATACCTGCGCCCAGACCAGAAGAGTTCCACCAG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCTGCTGAAGAAGGGCTaGATCTGCACTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRLLKKG*ICTWWR
Trigger: TCGCCACCAAGTGCAGATCCAGCCCTTCTTCAGCAG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKGAEAG*PLEVRE
Trigger: CTCCCGGACTTCAAGAGGCCAGCCTGCTTCGGCACC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCGACCAGCGGGTCTATaGCCAGGCAGGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQRPAGL*PGRPGS
Trigger: GCTCCCAGGCCTGCCTGGCCATAGACCCGCTGGTCG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCTCCCTCACGTCCTCTaGAAGGAGGTCAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCLPHVL*KEVRRR
Trigger: GCGTCTCCTGACCTCCTTCCAGAGGACGTGAGGGAG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGGGGTTTCACCATGTTaGCCAGGCTGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYGVSPC*PGWLKL
Trigger: GAGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATTCAAATGCTGTCTTTaGACCTCAGACCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISFKCCL*TSDPEV
Trigger: GACTTCAGGGTCTGAGGTCCAAAGACAGCATTTGAA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGGCCATACACCATCTaGGACACAGAGCTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGPYTI*DTELWW
Trigger: CCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGCCCCAGAAGCAGGCTaGTGCCACTCGGGGATACTG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKAPEAG*CHSGIL
Trigger: CAGTATCCCCGAGTGGCACCAGCCTGCTTCTGGGGC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCCCAGTGCTAGGATCTaGGAGAGGCGATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCPSARI*ERRWGM
Trigger: CATGCCCCATCGCCTCTCCCAGATCCTAGCACTGGG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGACAGAAACTCAAACCTaGCGCACAAACGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRTETQT*RTNVHW
Trigger: CCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCGTCCCACAGGCTGCCTaGGCTCATGCATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSVPQAA*AHAWRG
Trigger: ACCACGCCATGCATGAGCTCAGGCAGCCTGTGGGAC...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTACCATCTCCTGCTTCTaGCGGCCCACCCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFTISCF*RPTQVM
Trigger: CATGACCTGGGTGGGCCGTCAGAAGCAGGAGATGGT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAATGTTCATGGCTGCAGTaGACAGGTCCCCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKCSWLQ*TGPPRA
Trigger: AGCCCGTGGGGGACCTGTTCACTGCAGCCATGAACA...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATTGGACCTCAGACCCTaGAGTCACAGCAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPLDLRP*SHSSTP
Trigger: AGGGGTGCTGCTGTGACTTCAGGGTCTGAGGTCCAA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTCTGTCCGACACAGTTaGCTTGTGGGATGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCSVRHS*LVGCRP
Trigger: GGGCCTGCATCCCACAAGTCAACTGTGTCGGACAGA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGTACAGAATTAACATaGACAGCTTGTGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGTELT*TACAMG
Trigger: ACCCATTGCACAAGCTGTTCATGTTAATTCTGTACC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAATATAGCGCGTGGTTaGCTGTCAGGCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPNIARG*LSGPLP
Trigger: GGGCAGAGGGCCTGACAGTCAACCACGCGCTATATT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCCGGGAGGCAAGGTCTaGGAGTGGAAGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFPGGKV*EWKLLG
Trigger: TCCCAGGAGCTTCCACTCTCAGACCTTGCCTCCCGG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACCATGGGGGTGCTGCTaGCAAGGGGCGAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELPWGCC*QGASPR
Trigger: CCGAGGACTCGCCCCTTGGCAGCAGCACCCCCATGG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTGGCGGAAAAGCAGCTaGCGCTGGAGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSWRKSS*RWRLLR
Trigger: CCTGAGGAGCCTCCAGCGGCAGCTGCTTTTCCGCCA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCAGCCCGAGTTCTTCTaGAGCTGGCGGAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCQPEFF*SWRKSS
Trigger: GCTGCTTTTCCGCCAGCTGCAGAAGAACTCGGGCTG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGAGGACAAAGGCAGCTaGCCTGGAGATAGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYEDKGS*PGDSRQ
Trigger: TTGCCTACTATCTCCAGGGCAGCTGCCTTTGTCCTC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTTGTTGGTGGCTGCGTaGATAATCGGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRLLVAA*IIGLDT
Trigger: TGTGTCCAGGCCGATTATGCACGCAGCCACCAACAA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAGGTGCCCCGGGCCTTaGTGGAGTCCCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELRCPGP*WSPSWQ
Trigger: CTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAGGTGCCCCGGGCCTTaGTGGAGTCCCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWRCPGP*WSPSWQ
Trigger: CTGCCAGCTGGGACTCCAGCAAGGCCCGGGGCACCT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACAGCCCCCAACCCTGCTaGCTCTTCTTTGTAAGGATC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYSPQPC*LFFVRI
Trigger: GATCCTTACAAAGAAGAGGCAGCAGGGTTGGGGGCT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGAGTCGGCTCCACTTTaGTCGCTTCCGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKESAPL*SLPASS
Trigger: GCTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACAGACCAGCGCCCGGTaGTCCAGGAGTCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELQTSAR*SRSRRE
Trigger: CTCCCTGCGACTCCTGGACCACCGGGCGCTGGTCTG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACAACAGGTCTCCTTGTTaGGTGTGGGCAAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYNRSPC*VWAKCS
Trigger: GCTGCACTTTGCCCACACCCAACAAGGAGACCTGTT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCAAGCTCACACGCAGCTaGTGGGCCTCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSKLTRS*WASRVS
Trigger: GGAGACCCTGGAGGCCCACCAGCTGCGTGTGAGCTT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGTGACGTTGGATCGCTaGTGGAACTCTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYVTLDR*WNSSGL
Trigger: CAGACCAGAAGAGTTCCACCAGCGATCCAACGTCAC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACTCCTGCCTCCGAGATaGCCTGCTCTTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKLLPPR*PALPAG
Trigger: ACCTGCTGGAAGAGCAGGCCATCTCGGAGGCAGGAG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAAAAAGCAGCTGCCGCTaGAGGCTCCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKKSSCR*RLLRLS
Trigger: GGAGAGCCTGAGGAGCCTCCAGCGGCAGCTGCTTTT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGAGTTCTTCTGCAGCTaGCGGAAAAGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCEFFCS*RKSSCR
Trigger: GCGGCAGCTGCTTTTCCGCCAGCTGCAGAAGAACTC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACTCCTCTCTCAAAGCTaGGATCTGGGCGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKLLSQS*DLGGPW
Trigger: CCAGGGACCGCCCAGATCCCAGCTTTGAGAGAGGAG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAATGGGAGCGGGCTGTGTaGATTCCCCTGGGGATAGAC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKWERAV*IPLGID
Trigger: GTCTATCCCCAGGGGAATCCACACAGCCCGCTCCCA...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGGGAGGGGCACAGCGTaGAGGGCACCTGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKGRGTA*RAPVLR
Trigger: TCTAAGAACAGGTGCCCTCCACGCTGTGCCCCTCCC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAACTCTACGCGGGAGTTaGGAGCTTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPTLRGS*ELVGGC
Trigger: GCAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTCCCACAGGCAAGACTaGCCCACCCGGGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQSHRQD*PTRVTA
Trigger: GGCAGTCACCCGGGTGGGCCAGTCTTGCCTGTGGGA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGTCTTCATTTCTCCCTaGAGCGGATGTAAAATAAGG +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISVFISP*SGCKIR
Trigger: CCTTATTTTACATCCGCTCCAGGGAGAAATGAAGAC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp AAAGTCATGAAACTCTACGCGGGAGTTGGGAGCTTGTaGGTGGCTGCGTGCATAATCGGCCTGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: KVMKLYAGVGSL*VAACIIGLDTG
Trigger: GCCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGTTTCATGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp TCTGCACTGCTCCAGGCAACCTTCGGTAGTCGGCTGTaGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SALLQATFGSRL*LGSSFLSMKAQ
Trigger: CTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAAGGTTGCCTGGAGCAGTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTGTTCATGGCTGCAGTaGACAGGTCCCCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFCSWLQ*TGPPRA
Trigger: AGCCCGTGGGGGACCTGTTCACTGCAGCCATGAACA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCCCCGGGGCTGCAGGTaGGGTTCCAGCTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWPRGCR*GSSFAT
Trigger: AGTGGCAAAGCTGGAACCTCACCTGCAGCCCCGGGG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACGCCCAGGCTGGTCTTaGACTCCTGAGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKRPGWS*TPELKQ
Trigger: TTGCTTGAGCTCAGGAGTTCAAGACCAGCCTGGGCG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCCAGCCCAGCTGCTCTaGAGAATCCTACGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCPAQLL*RILRAN
Trigger: GTTAGCACGTAGGATTCTTCAGAGCAGCTGGGCTGG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTCTGTCCGACACAGTTaGCTTGTGGGATGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFSVRHS*LVGCRP
Trigger: GGGCCTGCATCCCACAAGTCAACTGTGTCGGACAGA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCAGCCAAGTACTTCCTaGGCTCCTGAGAGACGCCAA +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCQPSTS*APERRQ
Trigger: TTGGCGTCTCTCAGGAGCTCAGGAAGTACTTGGCTG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTACTGGCCCACCCGGGTaGCTGCCTGCTTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFTGPPG*LPAFIN
Trigger: GTTGATGAAAGCAGGCAGTCACCCGGGTGGGCCAGT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACATCACAGGGCTGTGGTaGGAATCACATGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYITGLW*ESHEVT
Trigger: TGTCACCTCATGTGATTCTCACCACAGCCCTGTGAT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACAGCCCGAGTTCTTCTaGAGCTGGCGGAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKQPEFF*SWRKSS
Trigger: GCTGCTTTTCCGCCAGCTGCAGAAGAACTCGGGCTG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAGGCGTGAGCCACCGTaGCCGGCCCATCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELRREPP*PAHPVR
Trigger: ACGAACAGGATGGGCCGGGCACGGTGGCTCACGCCT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAGGCATGTGTCACCATaGCCGGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRRHVSP*PANFSI
Trigger: AATAGAAAAATTAGCCGGGCATGGTGACACATGCCT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCATCAAGGACCTTCCTATaGAGAAAAGAGAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: QLTCGMQARLLEQRPSISSRTFL*RKEKLV
Trigger: AACCAGTTTCTCTTTTCTGCATAGGAAGGTCCTTGA...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTGGGCAAAGTGCAGCTaGATCTGCAGGTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCWAKCS*ICRSFG
Trigger: CCCAAAGGACCTGCAGATCCAGCTGCACTTTGCCCA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGTCCGGAATTGGTTCTaGAGTGTCTGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRVRNWF*SVWHFW
Trigger: CCAGAAATGCCAGACACTCCAGAACCAATTCCGGAC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGCGGTGAGCAGGAACTaGGCGAATTTCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKAVSRN*ANFRTT
Trigger: CGTGGTCCTGAAATTCGCCCAGTTCCTGCTCACCGC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCTCCTGCCTCCGAGATaGCCTGCTCTTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFLLPPR*PALPAG
Trigger: ACCTGCTGGAAGAGCAGGCCATCTCGGAGGCAGGAG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCTCCTCTCTCAAAGCTaGGATCTGGGCGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSLLSQS*DLGGPW
Trigger: CCAGGGACCGCCCAGATCCCAGCTTTGAGAGAGGAG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGAGGAATGGGAGCAGATaGGAACATGTGCTCTACGCA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRRNGSR*EHVLYA
Trigger: TGCGTAGAGCACATGTTCCCATCTGCTCCCATTCCT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAATCTGGGAGAGGCGATaGGGCATGGAGAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKIWERR*GMESHA
Trigger: TGCATGGCTCTCCATGCCCCATCGCCTCTCCCAGAT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAAGGGGTTATTCCTCCTaGGAAGGACTCCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKRGYSS*EGLQGE
Trigger: CTCCCCCTGGAGTCCTTCCCAGGAGGAATAACCCCT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAGCAGAGGCGGCCAGTaGGACACCCGTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWSRGGQ*DTRAGK
Trigger: CTTCCCTGCACGGGTGTCCCACTGGCCGCCTCTGCT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGAAAGAGGAGGTAGCTaGCACAATGCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRERGGS*HNATLQ
Trigger: CTGCAATGTGGCATTGTGCCAGCTACCTCCTCTTTC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp TGCTCCTGTTCTCCTTTGCCTGGTCCTTTGCTGCTGTaGGGTGGATTATGGGCCATACACCATCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: CSCSPLPGPLLL*GGLWAIHHLGH
Trigger: GTGTCCCAGATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp GGAGGCTTCTGCTCCTGTTCTCCTTTGCCTGGTCCTTaGCTGCTGTTGGGTGGATTATGGGCCATACACCAT +
Preference number: 4 (lower is better)
Translates to: GGFCSCSPLPGP*LLLGGLWAIHH
Trigger: ATGGTGTATGGCCCATAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGCAGAAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAAGTGTCCATTCGATGTaGGCCACGGGGAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKSVHSM*ATGNRS
Trigger: AGACCTGTTCCCCGTGGCTCACATCGAATGGACACT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCGCCACCGCCTGTGGTaGTGCCTCAGTTTGGACAGA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQRHRLW*CLSLDR
Trigger: TCTGTCCAAACTGAGGCATCACCACAGGCGGTGGCG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTATTCGTTCCACAGGGTaGAGCTCACACGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFIRSTG*SSHAAG
Trigger: ACCAGCTGCGTGTGAGCTTCACCCTGTGGAACGAAT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCGGTCGGCTGAGTAGATaGTCCAGACCTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSGRLSR*SRPSWA
Trigger: AGCCCAGGAAGGTCTGGATCATCTACTCAGCCGACC...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGCTGGCTCAAACTCCTaGCCTCAGAGTGATCCACCT +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKAGSNS*PQSDPP
Trigger: AGGTGGATCACTCTGAGGTCAGGAGTTTGAGCCAGC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCCACCAGCAGCTCCCTaGCAAGCTCACTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQPPAAP*QAHSTH
Trigger: GTGAGTGGAGTGAGCTTGTCAGGGAGCTGCTGGTGG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCAACTAGCAACTTCTTaGCCTACAGTAAGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYQLATS*PTVSGS
Trigger: CGAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTGGGTGTGGGCAAAGTaGAGCTGGATCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSWVWAK*SWICRS
Trigger: GGACCTGCAGATCCAGCTGCACTTTGCCCACACCCA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGGCTGCCTGAGCTCATaGATGGCGTGGTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKGCLSS*MAWLPS
Trigger: TGAAGGTAACCACGCCATGCATGAGCTCAGGCAGCC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGTATGTGGTGCATGTaGTCAAAGCAACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGMWCM*SKQLWF
Trigger: GAACCACAGTTGCTTTGAGCACATGCACCACATACC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGGCGCAGGTATGTGGTaGATGTGCTCAAAGCAACTG +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPGAGMW*MCSKQL
Trigger: CAGTTGCTTTGAGCACATGCACCACATACCTGCGCC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTCATCCAGGCTGCAGTaGAATGGCACAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCSSRLQ*NGTISA
Trigger: AGCCGAGATTGTGCCATTGCACTGCAGCCTGGATGA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCACCTTCCTGCCAGATaGTTTTACGTTTCACCTCGA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYHLPAR*FYVSPR
Trigger: TCGAGGTGAAACGTAAAAGCATCTGGCAGGAAGGTG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGAGCTCCAGCCCAGCTaGTCTGAAGAATCCTACGTG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKELQPS*SEESYV
Trigger: CACGTAGGATTCTTCAGAGCAGCTGGGCTGGAGCTC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTGCCTGGTCCTTTGCTaGTGTTGGGTGGATTATGGG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCCLVLC*CWVDYG
Trigger: CCCATAATCCACCCAACAGCAGCAAAGGACCAGGCA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTGGCTGGGAGGCTTCTaGTCCTGTTCTCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFWLGGF*SCSPLP
Trigger: AGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCCA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCCCACACCTAGGCCTTaGCTGAGTCTGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQPTPRP*LSLAMQ
Trigger: CTGCATGGCCAGACTCAGGCAAGGCCTAGGTGTGGG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGTCACCTCATATTCCTaGTCAGGGTCAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYVTSYS*SGSTTK
Trigger: CTTTGTGGTTGACCCTGACCAGGAATATGAGGTGAC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCATCAGGGATGGGCTTaGGCAGGTGGTGAACGGTCA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSHQGWA*AGGERS
Trigger: TGACCGTTCACCACCTGCCCAAGCCCATCCCTGATG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGGTCCCCATCAGGGATaGGCTTGGGCAGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQGPHQG*AWAGGE
Trigger: TTCACCACCTGCCCAAGCCCATCCCTGATGGGGACC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACAGGAAATTCTTGGACTaGTGGTTTGGGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYRKFLD*WFGSPS
Trigger: TGATGGGGACCCAAACCACCAGTCCAAGAATTTCCT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATGGTTACCTTCATCCTaGCGTGCTCACAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPWLPSS*RAHSQA
Trigger: TGCCTGACTGTGAGCACGCCAGGATGAAGGTAACCA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTGGATCTGCACTTGGTaGCGACAGCACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCWICTW*RQHPLR
Trigger: CCTTAAAGGGTGCTGTCGCCACCAAGTGCAGATCCA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTCTGCTGAAGAAGGGCTaGATCTGCACTTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFLLKKG*ICTWWR
Trigger: TCGCCACCAAGTGCAGATCCAGCCCTTCTTCAGCAG...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCGAGTTCTTCTGCAGCTaGCGGAAAAGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSEFFCS*RKSSCR
Trigger: GCGGCAGCTGCTTTTCCGCCAGCTGCAGAAGAACTC...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGGGCCATACACCATCTaGGACACAGAGCTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKGPYTI*DTELWW
Trigger: CCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCAAAAGGCTAGTGGCTaGGAGGCTTCTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCQKASG*EASAPV
Trigger: AACAGGAGCAGAAGCCTCCCAGCCACTAGCCTTTTG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGAAGGTTCCTGAGGAATaGGAGCAGATGGGAACATGT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRKVPEE*EQMGTC
Trigger: ACATGTTCCCATCTGCTCCCATTCCTCAGGAACCTT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCACTCTACGCGGGAGTTaGGAGCTTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSTLRGS*ELVGGC
Trigger: GCAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTGCTGGAGTCCCAGCTaGCAGGGCGCTAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQCWSPS*QGAKAE
Trigger: TTCTGCCTTAGCGCCCTGCCAGCTGGGACTCCAGCA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACAGGACCCCATGAGGTaGGAACTCCTGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELQDPMR*ELLPHP
Trigger: TGGGTGGGGCAGGAGTTCCCACCTCATGGGGTCCTG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAAGCGAACGAACGTTCTaGGGCTTTCTTTTCCGCGGT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKSERTF*GFLFRG
Trigger: ACCGCGGAAAAGAAAGCCTCAGAACGTTCGTTCGCT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCAGTGTCCATTCGATGTaGGCCACGGGGAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSSVHSM*ATGNRS
Trigger: AGACCTGTTCCCCGTGGCTCACATCGAATGGACACT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGGCTTGGGCAGGTGGTaGACGGTCACCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQGLGRW*TVTSYS
Trigger: GGAATATGAGGTGACCGTTCACCACCTGCCCAAGCC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGAGGGGGTGGTCGGCTaGGTAGATGATCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQEGVVG*VDDPDL
Trigger: AAGGTCTGGATCATCTACTCAGCCGACCACCCCCTC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACCACCAGCAGCTCCCTaGCAAGCTCACTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELPPAAP*QAHSTH
Trigger: GTGAGTGGAGTGAGCTTGTCAGGGAGCTGCTGGTGG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGCTCTCTTCCTATAAATaGACTCAGGTGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRLSSYK*TQVTSS
Trigger: GCTGGATGTCACCTGAGTTCATTTATAGGAAGAGAG...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGATTATTGGAGAGACTaGGCCCAAAAGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCDYWRD*AQKASG
Trigger: GCCACTAGCCTTTTGGGCTCAGTCTCTCCAATAATC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGATTATTGGAGAGACTaGGCCCAAAAGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPDYWRD*AQKASG
Trigger: GCCACTAGCCTTTTGGGCTCAGTCTCTCCAATAATC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTGTGCTGATGGCTGCTaGACTGTGACTATACTAAAC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYCADGC*TVTILN
Trigger: GTTTAGTATAGTCACAGTTCAGCAGCCATCAGCACA...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATACTTCCTGAGCTCCTaGGAGACGCCAAATATGGGA +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPYFLSS*ETPNMG
Trigger: TCCCATATTTGGCGTCTCTCAGGAGCTCAGGAAGTA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGAGAGGAAGGATCCAGTaGGCGAACTCATCTTATAGT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRRGRIQ*ANSSYS
Trigger: ACTATAAGATGAGTTCGCTCACTGGATCCTTCCTCT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCAAGTGCAGCTGGATCTaGAGGTCCTTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSKCSWI*RSFGEE
Trigger: CTCCTCCCCAAAGGACCTGCAGATCCAGCTGCACTT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTGGGTGTGGGCAAAGTaGAGCTGGATCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQWVWAK*SWICRS
Trigger: GGACCTGCAGATCCAGCTGCACTTTGCCCACACCCA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGGCGCAGGTATGTGGTaGATGTGCTCAAAGCAACTG +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFGAGMW*MCSKQL
Trigger: CAGTTGCTTTGAGCACATGCACCACATACCTGCGCC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTCTCCAGGTCCTGGATaGGGAAGTACACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFSPGPG*GSTPPR
Trigger: TCGAGGAGGTGTACTTCCGCATCCAGGACCTGGAGA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCAGCTTTGCCACTGCTaGTCCTCCTTCCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWQLCHC*SSFLPD
Trigger: GTCGGGGAGGAAGGAGGAGCAGCAGTGGCAAAGCTG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATGCCTTTCCCGTGCATaGTCACAACCCTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELCLSRA*SQPWAG
Trigger: GCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGCA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGGGTGCCTTTCCCGTaGATGCTCACAACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWWVPFP*MLTTLG
Trigger: GCCCAGGGTTGTGAGCATGCACGGGAAAGGCACCCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGCTCCTGTTCTCCTTTaGCTGGTCCTTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFAPVLL*LVLCCC
Trigger: ACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGCAGATGGGAACATGTaGTCTACGCAGGAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKADGNM*STQEEC
Trigger: GCACTCTTCCTGCGTAGAGCACATGTTCCCATCTGC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGAGATAGTAGGCAATaGCCATCAGGACATTTACTG +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGDSRQ*PSGHLL
Trigger: CAGTAAATGTCCTGATGGGCATTGCCTACTATCTCC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCGAGCTTGTTGGTGGCTaGGTGCATAATCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSELVGG*VHNRPG
Trigger: TCCAGGCCGATTATGCACGCAGCCACCAACAAGCTC...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTATCCATCATACCCTTaGATTCAGAGATCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYYPSYP*IQRSQL
Trigger: GAGCTGGGATCTCTGAATGCAAGGGTATGATGGATA...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGGCACAAACTGCTCTaGCCCAGAAGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGHKLL*PRSRLV
Trigger: CACCAGCCTGCTTCTGGGGCAGAGCAGTTTGTGCCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACATGAGACAGGAGACTaGATGTTCCTCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKHETGD*MFLPQA
Trigger: TGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCTCCCACATCTGCACTaGTCCAGGCAACCTTCGGTA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSLPHLH*SRQPSV
Trigger: TACCGAAGGTTGCCTGGAGCAGTGCAGATGTGGGAG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATCTTCCTCCCACATCTaGACTGCTCCAGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKSSSHI*TAPGNL
Trigger: AAGGTTGCCTGGAGCAGTGCAGATGTGGGAGGAAGA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTCTCCTTGTTGGGTGTaGGCAAAGTGCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFSPCWV*AKCSWI
Trigger: GATCCAGCTGCACTTTGCCCACACCCAACAAGGAGA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCGCACAAACGTTCATTaGTGTTCAGCTGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCRTNVH*CSAAGQ
Trigger: CTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTAGCTCATGCATGGCGTaGTTACCTTCATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFSSCMA*LPSSWR
Trigger: ACGCCAGGATGAAGGTAACCACGCCATGCATGAGCT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACTGGGCGCAGGTATGTaGTGCATGTGCTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKLGAGM*CMCSKQ
Trigger: TTGCTTTGAGCACATGCACCACATACCTGCGCCCAG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGTGACGTTGGATCGCTaGTGGAACTCTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFVTLDR*WNSSGL
Trigger: CAGACCAGAAGAGTTCCACCAGCGATCCAACGTCAC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAAAAGCAGCTGCCGCTaGAGGCTCCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWKSSCR*RLLRLS
Trigger: GGAGAGCCTGAGGAGCCTCCAGCGGCAGCTGCTTTT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAAAGTTCCTTCATGGCTaGGGCCATGCCGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKKFLHG*GHAACN
Trigger: ATTGCATGCGGCATGGCCCCAGCCATGAAGGAACTT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCACTGGGCCCAGGAAATaGGGAGGGAATGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSTGPRK*GGNVRR
Trigger: TCTCCTCACATTCCCTCCCCATTTCCTGGGCCCAGT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTATTAGCCGGGCACAGTaGTGCACGCCTGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFISRAQ*CTPVVL
Trigger: TAGAACTACAGGCGTGCACCACTGTGCCCGGCTAAT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTTTCATCAACCTAAATaGACAGGGCGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRFHQPK*TGRECG
Trigger: TCCACACTCTCGCCCTGTCCATTTAGGTTGATGAAA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTCTCCTCCTCCTACCTaGTCACTGTGTACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCSPPPT*SLCTFF
Trigger: GAAGAAGGTACACAGTGACCAGGTAGGAGGAGGAGA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACCCCGGAATTGGTTCTaGAGTGTCTGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKPRNWF*SVWHFW
Trigger: CCAGAAATGCCAGACACTCCAGAACCAATTCCGGGG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAGCAGGCTGGCCTCTTaGAGTCCGGGAGGATCATGT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELSRLAS*SPGGSC
Trigger: ACATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAATCCTGGTCATCTGCTaGGTAGAGGTTCTCACATTC +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPILVIC*VEVLTF
Trigger: GAATGTGAGAACCTCTACTCAGCAGATGACCAGGAT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGCTGGCTCAAACTCCTaGCCTCAGAGTGATCCACCT +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQAGSNS*PQSDPP
Trigger: AGGTGGATCACTCTGAGGTCAGGAGTTTGAGCCAGC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATTGGACCTCAGACCCTaGAGTCACAGCAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELLDLRP*SHSSTP
Trigger: AGGGGTGCTGCTGTGACTTCAGGGTCTGAGGTCCAA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACCAGCTTCCTTTCCATaGAAGCTCAGCCATTCTAGC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKPASFP*KLSHSS
Trigger: GCTAGAATGGCTGAGCTTTCATGGAAAGGAAGCTGG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACACCTAGGCCTTGCCTaGGTCTGGCCATGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELHLGLA*VWPCSS
Trigger: AGAACTGCATGGCCAGACTCAGGCAAGGCCTAGGTG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAATCACAGGGCTGTGGTaGGAATCACATGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKITGLW*ESHEVT
Trigger: TGTCACCTCATGTGATTCTCACCACAGCCCTGTGAT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGACCTTCATCCTGGCGTaGTCACAGTCAGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQTFILA*SQSGTR
Trigger: CCTTGTGCCTGACTGTGAGCACGCCAGGATGAAGGT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAGCAGACTACGTAGGTaGCGAAGCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWSRLRR*RSRLAS
Trigger: AGAGGCCAGCCTGCTTCGGCACCTACGTAGTCTGCT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTGGCAGCTCAGACTCTaGTCGAAGAGCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQWQLRL*SKSESI
Trigger: GATGCTCTCGCTCTTCGAGCAGAGTCTGAGCTGCCA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTGCCTGGTCCTTTGCTaGTGTTGGGTGGATTATGGG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSCLVLC*CWVDYG
Trigger: CCCATAATCCACCCAACAGCAGCAAAGGACCAGGCA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGGAAAGGTCACAGAATaGATGGTAGGTGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKGKVTE*MVGVQT
Trigger: GGTCTGGACACCTACCATGCATTCTGTGACCTTTCC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTTGTTGGTGGCTGCGTaGATAATCGGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSLLVAA*IIGLDT
Trigger: TGTGTCCAGGCCGATTATGCACGCAGCCACCAACAA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACAAGATGGACCTGGATaGCATTTCAGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKQDGPG*HFRVRG
Trigger: TCCCCTCACTCTGAAATGGCATCCAGGTCCATCTTG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAGCCTGAGCTCTCTCTaGCTCTCGTTAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQSLSSL*LSLAVA
Trigger: AGCCACAGCTAACGAGAGGCAGAGAGAGCTCAGGCT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCGAGGTACAGGATGCTaGCGTCTGTCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWRGTGC*RLSAVS
Trigger: GGACACTGCAGACAGACGCCAGCATCCTGTACCTCG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGGGTCAACCACAAAGTaGCTGAAGGTAAAACGCCAC +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKGSTTK*LKVKRH
Trigger: GTGGCGTTTTACCTTCAGCCACTTTGTGGTTGACCC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCTTGGACTGGTGGTTTaGGTCCCCATCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWLGLVV*VPIRDG
Trigger: CCCATCCCTGATGGGGACCCAAACCACCAGTCCAAG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAAAATTCTTGGACTGGTaGTTTGGGTCCCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKKFLDW*FGSPSG
Trigger: CCCTGATGGGGACCCAAACCACCAGTCCAAGAATTT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTGGATCTGCACTTGGTaGCGACAGCACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFWICTW*RQHPLR
Trigger: CCTTAAAGGGTGCTGTCGCCACCAAGTGCAGATCCA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAATGGTTCTGGAGTGTCTaGCATTTCTGGGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKWFWSV*HFWAGN
Trigger: GTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCA...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAATGAGCCACTGCACCTaGCCCATTCAGCGTTTACAT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKMSHCT*PIQRLH
Trigger: ATGTAAACGCTGAATGGGCCAGGTGCAGTGGCTCAT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAAAACTGCTTCCTTGCTaGGACTACGCTTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKKLLPC*DYAFPN
Trigger: GTTGGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACTGTTGGGTGGATTATaGGCCATACACCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKLLGGL*AIHHLG
Trigger: TCCCAGATGGTGTATGGCCCATAATCCACCCAACAG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCTGTTCTCCTTTGCCTaGTCCTTTGCTGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFLFSFA*SFAAVG
Trigger: CCCAACAGCAGCAAAGGACCAGGCAAAGGAGAACAG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAAGGAAGAGTGCATTGTaGTATCCTGTACTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKRKSAL*YPVLWA
Trigger: CGCCCAGAGTACAGGATACCACAATGCACTCTTCCT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGGACATTTACTGGCATaGGCTCAAAGGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFGHLLA*AQRPAE
Trigger: CTCTGCTGGCCTTTGAGCCCATGCCAGTAAATGTCC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGGGAAAGAGGATCAGTaGTACCTCAGGGGGCACAAA +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFGKEDQ*YLRGHK
Trigger: TTTGTGCCCCCTGAGGTACCACTGATCCTCTTTCCC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCAGGTGGAGGGCAAGATaGACCTGGATGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSRWRAR*TWMPFQ
Trigger: CTGAAATGGCATCCAGGTCCATCTTGCCCTCCACCT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGAAAGAGGAGGTAGCTaGCACAATGCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFERGGS*HNATLQ
Trigger: CTGCAATGTGGCATTGTGCCAGCTACCTCCTCTTTC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGGCGCTCACCGATTTTaGTTTGCCAGGCATATCAGA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFGAHRF*FARHIR
Trigger: TCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTCTAGGGAAGCAAGCTaGCGCTCACCGATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFSREAS*RSPILV
Trigger: AACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAGGCAGGTACTATTCTTaGCCGTGCAGTTTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELGRYYS*PCSLAP
Trigger: CGGGGCTAAACTGCACGGTCAAGAATAGTACCTGCC...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGATTCGTTCCACAGGGTaGAGCTCACACGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWIRSTG*SSHAAG
Trigger: ACCAGCTGCGTGTGAGCTTCACCCTGTGGAACGAAT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACTCTCTTCCTATAAATaGACTCAGGTGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPLSSYK*TQVTSS
Trigger: GCTGGATGTCACCTGAGTTCATTTATAGGAAGAGAG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGCCCAGATCTTCACTaGCCCACCACCCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWCPDLH*PTTPHF
Trigger: GAAATGAGGGGTGGTGGGTCAGTGAAGATCTGGGCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGTTCTTCAGGACCCTaGAGCCAGAAGCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWCSSGP*SQKPLA
Trigger: GGCTAGAGGCTTCTGGCTTCAGGGTCCTGAAGAACA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGCTGTTTTCATCTTCTaGGAGAATCCCATGACACTG +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCAVFIF*ENPMTL
Trigger: CAGTGTCATGGGATTCTCTCAGAAGATGAAAACAGC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAAGTGCAGCTGGATCTaGAGGTCCTTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELKCSWI*RSFGEE
Trigger: CTCCTCCCCAAAGGACCTGCAGATCCAGCTGCACTT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGCTGCCTGAGCTCATaGATGGCGTGGTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGCLSS*MAWLPS
Trigger: TGAAGGTAACCACGCCATGCATGAGCTCAGGCAGCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGATCATGTTCATGGCTaGAGTGAACAGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQDHVHG*SEQVPH
Trigger: GTGGGGGACCTGTTCACTGCAGCCATGAACATGATC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAATCAAGCCTTCGAGGTaGTCCCTCACGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELIKPSR*SLTSSG
Trigger: TCCAGAGGACGTGAGGGAGCACCTCGAAGGCTTGAT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTCATGGCTGGGGCCATaGCGCATGCAATTTATCTTG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSSWLGP*RMQFIL
Trigger: CAAGATAAATTGCATGCGGCATGGCCCCAGCCATGA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGACCATTATAGCTCACTaGAGCCTCTACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQTIIAH*SLYLLG
Trigger: GCCCAGGAGGTAGAGGCTGCAGTGAGCTATAATGGT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACACCTTCCTGCCAGATaGTTTTACGTTTCACCTCGA +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKHLPAR*FYVSPR
Trigger: TCGAGGTGAAACGTAAAAGCATCTGGCAGGAAGGTG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGCAAACTGTCCTGTTTaGTCTCCTGTCACATTTCCG +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFANCPV*SPVTFP
Trigger: CGGAAATGTGACAGGAGAGCAAACAGGACAGTTTGC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTGGCTGGGAGGCTTCTaGTCCTGTTCTCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWWLGGF*SCSPLP
Trigger: AGGCAAAGGAGAACAGGAGCAGAAGCCTCCCAGCCA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTCAAGGACCTTCCTATaGAGAAAAGAGAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRSRTFL*RKEKLV
Trigger: AACCAGTTTCTCTTTTCTGCATAGGAAGGTCCTTGA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGGCAGAAGAGGGCCCTaGATACACCTCATTTATTTA +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCGRRGP*IHLIYL
Trigger: TAAATAAATGAGGTGTATGCAGGGCCCTCTTCTGCC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCACCCGGGTGACTGCCTaGTTTCATCAACCTAAATGG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSTRVTA*FHQPKW
Trigger: CCATTTAGGTTGATGAAAGCAGGCAGTCACCCGGGT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTGGCCATGCAGTTCTTaGCCTAAGGAAGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFWPCSS*PKEEQE
Trigger: TTCCTGTTCTTCCTTAGGGCAAGAACTGCATGGCCA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAACAGGTCTCCTTGTTaGGTGTGGGCAAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQNRSPC*VWAKCS
Trigger: GCTGCACTTTGCCCACACCCAACAAGGAGACCTGTT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAACGTTGGATCGCTGGTaGAACTCTTCTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELTLDRW*NSSGLG
Trigger: GCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAACATCTCCAGGTCCTaGATGCGGAAGTACACCTCC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQNISRS*MRKYTS
Trigger: GGAGGTGTACTTCCGCATCCAGGACCTGGAGATGTT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTTGACCTACAGTAAGTaGCTCGACCTTCCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFLTYSK*LDLPAR
Trigger: TCTAGCAGGAAGGTCGAGCCACTTACTGTAGGTCAA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATTTGCTGCTGTTGGGTaGATTATGGGCCATACACCA +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKFAAVG*IMGHTP
Trigger: TGGTGTATGGCCCATAATCCACCCAACAGCAGCAAA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGTCCTTTGCTGCTGTTaGGTGGATTATGGGCCATAC +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFVLCCC*VDYGPY
Trigger: GTATGGCCCATAATCCACCCAACAGCAGCAAAGGAC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTGGTATCCTGTACTCTaGGCGTCAAACAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYWYPVL*ASNSYL
Trigger: TAAATAACTGTTTGACGCCCAGAGTACAGGATACCA...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTAAGGTTCCTGAGGAATaGGAGCAGATGGGAACATGT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFKVPEE*EQMGTC
Trigger: ACATGTTCCCATCTGCTCCCATTCCTCAGGAACCTT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp ATGTCTTCTAGGGAAGCAAGCTGGCGCTCACCGATTTaGGTTTGCCAGGCATATCAGAAGGCACTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: MSSREASWRSPI*VCQAYQKALCD
Trigger: GTCACAAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCATAAATGAACTCAGGTaGCATCCAGCTGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCINELR*HPAVFS
Trigger: GCTAAACACAGCTGGATGTCACCTGAGTTCATTTAT...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAGAATTCAAGGTTCCTaGGGAATGGGAGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQRIQGS*GMGADG
Trigger: CCCATCTGCTCCCATTCCTCAGGAACCTTGAATTCT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGACCTTGGAGAATTTATaGCTCCTTTCTCTATGTCAT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRTLENL*LLSLCH
Trigger: ATGACATAGAGAAAGGAGTCATAAATTCTCCAAGGT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTACTTCCTGAGCTCCTaGGAGACGCCAAATATGGGA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQYFLSS*ETPNMG
Trigger: TCCCATATTTGGCGTCTCTCAGGAGCTCAGGAAGTA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGGTACAGAATTAACATaGACAGCTTGTGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPGTELT*TACAMG
Trigger: ACCCATTGCACAAGCTGTTCATGTTAATTCTGTACC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAGGCATGTGTCACCATaGCCGGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPRHVSP*PANFSI
Trigger: AATAGAAAAATTAGCCGGGCATGGTGACACATGCCT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCACAAACTGCTTCCTTaGTGGGACTACGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWHKLLP*WDYAFP
Trigger: GGGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCTCAGCCTCTCTCCATaGAGAGGCTCATCAGACGAA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWLSLSP*RGSSDE
Trigger: TTCGTCTGATGAGCCTCTGCATGGAGAGAGGCTGAG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACTCAGCCTCTCTCCATaGAGAGGCTCATCAGACGAA +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELLSLSP*RGSSDE
Trigger: TTCGTCTGATGAGCCTCTGCATGGAGAGAGGCTGAG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGAGCCTCTTTTCAAATaGTGTCTTTGGACCTCAGAC +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKEPLFK*CLWTSD
Trigger: GTCTGAGGTCCAAAGACAGCATTTGAAAAGAGGCTC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGCTCCTGTTCTCCTTTaGCTGGTCCTTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWAPVLL*LVLCCC
Trigger: ACAGCAGCAAAGGACCAGGCAAAGGAGAACAGGAGC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAACCGGCATCAAATTGTaGAGGGTCAATTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKTGIKL*RVNCGL
Trigger: CAATCCACAATTGACCCTGCACAATTTGATGCCGGT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGGCAGAAGAGGGCCCTaGATACACCTCATTTATTTA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFGRRGP*IHLIYL
Trigger: TAAATAAATGAGGTGTATGCAGGGCCCTCTTCTGCC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCAAGATGGACCTGGATaGCATTTCAGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQQDGPG*HFRVRG
Trigger: TCCCCTCACTCTGAAATGGCATCCAGGTCCATCTTG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCATGAGACAGGAGACTaGATGTTCCTCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWHETGD*MFLPQA
Trigger: TGCCTGTGGGAGGAACATGCAGTCTCCTGTCTCATG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGTCACCTCATATTCCTaGTCAGGGTCAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFVTSYS*SGSTTK
Trigger: CTTTGTGGTTGACCCTGACCAGGAATATGAGGTGAC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATGGTTACCTTCATCCTaGCGTGCTCACAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELWLPSS*RAHSQA
Trigger: TGCCTGACTGTGAGCACGCCAGGATGAAGGTAACCA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAGCTCATGCATGGCGTaGTTACCTTCATCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELSSCMA*LPSSWR
Trigger: ACGCCAGGATGAAGGTAACCACGCCATGCATGAGCT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTGCTCAAAGCAACTGTaGTTCTCCATGTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFCSKQL*FSMCGK
Trigger: TTTTCCGCACATGGAGAACCACAGTTGCTTTGAGCA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTCTACCATTAGCTCCTaGGAGCGGGCTGTGTGGATT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWSTISS*ERAVWI
Trigger: AATCCACACAGCCCGCTCCCAGGAGCTAATGGTAGA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGCATGCAATTTATCTTaGTATCCCAAATGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKACNLS*YPKCPP
Trigger: TGGCGGGCATTTGGGATACCAAGATAAATTGCATGC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTTTCAAATGCTGTCTTTaGACCTCAGACCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFFKCCL*TSDPEV
Trigger: GACTTCAGGGTCTGAGGTCCAAAGACAGCATTTGAA...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTTTGCTGCTGTTGGGTaGATTATGGGCCATACACCA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSFAAVG*IMGHTP
Trigger: TGGTGTATGGCCCATAATCCACCCAACAGCAGCAAA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGGAAAGAGGATCAGTaGTACCTCAGGGGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGKEDQ*YLRGHK
Trigger: TTTGTGCCCCCTGAGGTACCACTGATCCTCTTTCCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGAGAGACGCCAAATATaGGAACACATATTACTTCTA +
Preference number: 4 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYERRQI*EHILLL
Trigger: TAGAAGTAATATGTGTTCCCATATTTGGCGTCTCTC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGGAAAATATAGCGCGTaGTTGACTGTCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQGKYSA*LTVRPS
Trigger: AGAGGGCCTGACAGTCAACCACGCGCTATATTTTCC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTCTAGGGAAGCAAGCTaGCGCTCACCGATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQSREAS*RSPILV
Trigger: AACCAAAATCGGTGAGCGCCAGCTTGCTTCCCTAGA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGTCTTCATTTCTCCCTaGAGCGGATGTAAAATAAGG +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPVFISP*SGCKIR
Trigger: CCTTATTTTACATCCGCTCCAGGGAGAAATGAAGAC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATCTAAGCAAGAACACTaGGCCTGCACCAAAATAAAC +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPSKQEH*ACTKIN
Trigger: GTTTATTTTGGTGCAGGCCCAGTGTTCTTGCTTAGA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp CAGATGGGAACATGTGCTCTACGCAGGAAGAGTGCATaGTGGTATCCTGTACTCTGGGCGTCAAACAGTTAT +
Preference number: 4 (lower is better)
Translates to: QMGTCALRRKSA*WYPVLWASNSY
Trigger: ATAACTGTTTGACGCCCAGAGTACAGGATACCACAATGCACTCTTCCTGCGTAGAGCACATGTTCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGATCCTGGTCATCTGCTaGGTAGAGGTTCTCACATTC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQILVIC*VEVLTF
Trigger: GAATGTGAGAACCTCTACTCAGCAGATGACCAGGAT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCAACTAGCAACTTCTTaGCCTACAGTAAGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQQLATS*PTVSGS
Trigger: CGAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAGAATTCAAGGTTCCTaGGGAATGGGAGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELRIQGS*GMGADG
Trigger: CCCATCTGCTCCCATTCCTCAGGAACCTTGAATTCT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTGTGCTGATGGCTGCTaGACTGTGACTATACTAAAC +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFCADGC*TVTILN
Trigger: GTTTAGTATAGTCACAGTTCAGCAGCCATCAGCACA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCCAGCTTCCTTTCCATaGAAGCTCAGCCATTCTAGC +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWPASFP*KLSHSS
Trigger: GCTAGAATGGCTGAGCTTTCATGGAAAGGAAGCTGG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGGTATGTGGTGCATGTaGTCAAAGCAACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQGMWCM*SKQLWF
Trigger: GAACCACAGTTGCTTTGAGCACATGCACCACATACC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCACACAGATGAATACGTaGACACACACTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSTQMNT*THTPLS
Trigger: TGAGAGAGGAGTGTGTGTGCACGTATTCATCTGTGT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATCATGGCTGGGGCCATaGCGCATGCAATTTATCTTG +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELSWLGP*RMQFIL
Trigger: CAAGATAAATTGCATGCGGCATGGCCCCAGCCATGA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCTCGCCTTCCCAAAGTaGTGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWLAFPK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTTGGGAAGGCGAG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCGGAGATAGTAGGCAATaGCCATCAGGACATTTACTG +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSGDSRQ*PSGHLL
Trigger: CAGTAAATGTCCTGATGGGCATTGCCTACTATCTCC...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGGGTTTAGGGGTAGCTaGTTTTCTTCATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPGFRGS*FSSYSS
Trigger: AGAAGAATATGAAGAAAAGCAGCTACCCCTAAACCC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTAACATGAACAGCTTGTaGAATGGGTTTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFNMNSL*NGFRGS
Trigger: GCTACCCCTAAACCCATTGCACAAGCTGTTCATGTT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCGCACAAACGTTCATTaGTGTTCAGCTGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWRTNVH*CSAAGQ
Trigger: CTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAGGAAATTCTTGGACTaGTGGTTTGGGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQRKFLD*WFGSPS
Trigger: TGATGGGGACCCAAACCACCAGTCCAAGAATTTCCT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGCTCTGCTGCCCAGGCTaGATTGCAATGGTACCATTA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWLCCPG*IAMVPL
Trigger: TAATGGTACCATTGCAATCCAGCCTGGGCAGCAGAG...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGAAGAAACAGACACCTTaGAGAATTTATGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRKKQTP*RIYDSF
Trigger: AAAGGAGTCATAAATTCTCCAAGGTGTCTGTTTCTT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGCTCAAACTGCTGAATaGATGTTTCAGAGACCGAAC +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFAQTAE*MFQRPN
Trigger: GTTCGGTCTCTGAAACATCCATTCAGCAGTTTGAGC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGGCGCTCACCGATTTTaGTTTGCCAGGCATATCAGA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWGAHRF*FARHIR
Trigger: TCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAATTACTTCTATAATCTaGAAAGGCAAACACCGGAGG +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKITSII*KGKHRR
Trigger: CCTCCGGTGTTTGCCTTTTCAGATTATAGAAGTAAT...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGGGTTTAGGGGTAGCTaGTTTTCTTCATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKGFRGS*FSSYSS
Trigger: AGAAGAATATGAAGAAAAGCAGCTACCCCTAAACCC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACCATGTGCGGAAAACTaGTCAGCAGGATCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELPCAEN*SAGSGN
Trigger: ATTACCAGATCCTGCTGACCAGTTTTCCGCACATGG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTGCTCAAAGCAACTGTaGTTCTCCATGTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQCSKQL*FSMCGK
Trigger: TTTTCCGCACATGGAGAACCACAGTTGCTTTGAGCA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTGGCCATCGGTGTATTTaGTGTCATCACTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFGHRCI*CHHCIF
Trigger: AAAAATACAGTGATGACACCAAATACACCGATGGCC...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGCCATTTTTCCACAATaGACATGTTCACTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFAIFPQ*TCSLSQ
Trigger: TTGGCTGAGTGAACATGTCCATTGTGGAAAAATGGC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTTTCATCAACCTAAATaGACAGGGCGAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQFHQPK*TGRECG
Trigger: TCCACACTCTCGCCCTGTCCATTTAGGTTGATGAAA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGACAGAAACTCAAACCTaGCGCACAAACGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWTETQT*RTNVHW
Trigger: CCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTATTACTTCTATAATCTaGAAAGGCAAACACCGGAGG +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFITSII*KGKHRR
Trigger: CCTCCGGTGTTTGCCTTTTCAGATTATAGAAGTAAT...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGACACAGATGAATACGTaGACACACACTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWTQMNT*THTPLS
Trigger: TGAGAGAGGAGTGTGTGTGCACGTATTCATCTGTGT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTATCTACGCAGGAAGAGTaGATTGTGGTATCCTGTACT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELSTQEE*IVVSCT
Trigger: AGTACAGGATACCACAATGCACTCTTCCTGCGTAGA...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAATGGAATCCATATTGTTaGCATTTTTCCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKWNPYC*HFSTMD
Trigger: GTCCATTGTGGAAAAATGGCAACAATATGGATTCCA...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCAAGAACACTGGGCCTaGACCAAAATAAACAAACAC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQQEHWA*TKINKH
Trigger: GTGTTTGTTTATTTTGGTGCAGGCCCAGTGTTCTTG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTAAATTCTTCAAACACTaGCTTCAGAGCCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFKFFKH*LQSLFS
Trigger: TGAAAAGAGGCTCTGAAGCCAGTGTTTGAAGAATTT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACAAACAGTTATTTATTaGAAGCTAGGGAAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKQTVIY*KLGKGH
Trigger: GTGACCTTTCCCTAGCTTCCAATAAATAACTGTTTG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp AAGGTGTGGCTTTATTTACACACACTCTTGAAGCTCTaGGCATTCAGCGGACAGCAAACACCATACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KVWLYLHTLLKL*AFSGQQTPYSE
Trigger: CTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTCAAGAGTGTGTGTAAATAAAGCCACACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCACAATAAATGCTGAATaGACGAATAATGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSTINAE*TNNGAS
Trigger: TGAGGCTCCATTATTCGTTCATTCAGCATTTATTGT...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCCAAACAGTTATTTATTaGAAGCTAGGGAAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSQTVIY*KLGKGH
Trigger: GTGACCTTTCCCTAGCTTCCAATAAATAACTGTTTG...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGAGAGACGCCAAATATaGGAACACATATTACTTCTA +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFERRQI*EHILLL
Trigger: TAGAAGTAATATGTGTTCCCATATTTGGCGTCTCTC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp AGCCTGAGCTCTCTCTGCCTCTCGTTAGCTGTGGCTTaGGCCATCAACTGGAACTATGTCATTATTTATAAA +
Preference number: 4 (lower is better)
Translates to: SLSSLCLSLAVA*AINWNYVIIYK
Trigger: TTTATAAATAATGACATAGTTCCAGTTGATGGCCAAAGCCACAGCTAACGAGAGGCAGAGAGAGCTCAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR GCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTGGAATCCATATTGTTaGCATTTTTCCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQWNPYC*HFSTMD
Trigger: GTCCATTGTGGAAAAATGGCAACAATATGGATTCCA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAGGCCATCGGTGTATTTaGTGTCATCACTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELGHRCI*CHHCIF
Trigger: AAAAATACAGTGATGACACCAAATACACCGATGGCC...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTGCTTTGGCCATCAACTaGAACTATGTCATTATTTAT +
Preference number: 4 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFALAIN*NYVIIY
Trigger: ATAAATAATGACATAGTTCCAGTTGATGGCCAAAGC...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR TCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAACAATAAATGCTGAATaGACGAATAATGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELTINAE*TNNGAS
Trigger: TGAGGCTCCATTATTCGTTCATTCAGCATTTATTGT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAAAATTCTTCAAACACTaGCTTCAGAGCCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: EALGIQRTANTILRVMELKFFKH*LQSLFS
Trigger: TGAAAAGAGGCTCTGAAGCCAGTGTTTGAAGAATTT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGCTTTGGCCATCAACTaGAACTATGTCATTATTTAT +
Preference number: 4 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQALAIN*NYVIIY
Trigger: ATAAATAATGACATAGTTCCAGTTGATGGCCAAAGC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp ACAAAAATAAAGGTGTGGCTTTATTTACACACACTCTaGAAGCTCTTGGCATTCAGCGGACAGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: TKIKVWLYLHTL*KLLAFSGQQTP
Trigger: TGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTCAAGAGTGTGTGTAAATAAAGCCACACCTTTATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
3UTR CAA 72 bp CAACAAAAGCAAGAAAGAAGTATATCCATCATACCCTaGCATTCAGAGATCCCAGCTCAAACTGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: QQKQERSISIIP*HSEIPAQTAEW
Trigger: CCATTCAGCAGTTTGAGCTGGGATCTCTGAATGCAAGGGTATGATGGATATACTTCTTTCTTGCTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CCA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAAGAAACAGACACCTTaGAGAATTTATGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWKKQTP*RIYDSF
Trigger: AAAGGAGTCATAAATTCTCCAAGGTGTCTGTTTCTT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 90 bp CAGCAGCGGGCAGGCCTCGCCCTCCCCCGCCAGTGCCAGCCGGACTaGGGCACCGTCAGCCAGGGGCCCAGGCTCCACCGCGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: QQRAGLALPRQCQPD*GTVSQGPRLHRGHQ
Trigger: CTGGTGGCCGCGGTGGAGCCTGGGCCCCTGGCTGACGGTGCCGCAGTCCGGCTGGCACTGGCGGGGGAGGGCGAGGCCTGCCCGCTGCTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 90 bp GGTCCACGGGGAGGAAGAGGACGCTATTTCGCCCAGCGCCCGGGCTaGCCAGCAGCGGGCAGGCCTCGCCCTCCCCCGCCAGTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPRGGRGRYFAQRPG*PAAGRPRPPPPVPA
Trigger: GGCTGGCACTGGCGGGGGAGGGCGAGGCCTGCCCGCTGCTGGGCAGCCCGGGCGCTGGGCGAAATAGCGTCCTCTTCCTCCCCGTGGACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp GCTGTCATCCAGGCAGGTACCGGCTGGGAGCAGACCAGCGCCCGGTaGTCCAGGAGTCGCAGGGAGGCGCCACCCGGGGCCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: AVIQAGTGWEQTSAR*SRSRREAPPGASTP
Trigger: GGGCGTGCTGGCCCCGGGTGGCGCCTCCCTGCGACTCCTGGACCACCGGGCGCTGGTCTGCTCCCAGCCGGTACCTGCCTGGATGACAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477874.1
CDS GCA 90 bp GGACCTGCCAGTCCCGGAACCTGTCCAGGGCGGCGCGGAGCTGCCTaGCGCCCGGGCTCCGCAGGTAGTTGTCCCCCGACAGCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: GPASPGTCPGRRGAA*RPGSAGSCPPTAPL
Trigger: TAGGGGAGCTGTCGGGGGACAACTACCTGCGGAGCCCGGGCGGCAGGCAGCTCCGCGCCGCCCTGGACAGGTTCCGGGACTGGCAGGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp TTGACCGTGCAGTTTAGCCCCGGCTGGGAGCAGACCAGCGCCCGGTaGTCCAGGAGTCGCAGGGAGGCGCCACCCGGGGCCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: LTVQFSPGWEQTSAR*SRSRREAPPGASTP
Trigger: GGGCGTGCTGGCCCCGGGTGGCGCCTCCCTGCGACTCCTGGACCACCGGGCGCTGGTCTGCTCCCAGCCGGGGCTAAACTGCACGGTCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000459971.1
ENST00000612619.1
CDS CCA 90 bp GCTTTGCCACTGCTGCTCCTCCTTCCTCCCCGACCAGCGGGTCTATaGCCAGGCAGGCCTGGGAGCCAGGCTCGCGCACCAGGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ALPLLLLLPPRPAGL*PGRPGSQARAPGAP
Trigger: GGGCGCCCCTGGTGCGCGAGCCTGGCTCCCAGGCCTGCCTGGCCATAGACCCGCTGGTCGGGGAGGAAGGAGGAGCAGCAGTGGCAAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAGGAGCGCCTGCCACTaGGCGCGCGTGCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSRSACH*ARVPRE
Trigger: CTCCCGCGGCACGCGCGCCAAGTGGCAGGCGCTCCT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCGGGGATACTGCAGGCTaGCCAGGACCCCATGAGGTG +
Preference number: 5 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSGDTAG*PGPHEV
Trigger: CACCTCATGGGGTCCTGGCAAGCCTGCAGTATCCCC...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 90 bp GGCTCCGCAGGTAGTTGTCCCCCGACAGCTCCCCTACGCGGTGCATaGGGCCCGGCTGGAACATCTCCAGGTCCTGGATGCGGAAGTACA +
Preference number: 5 (lower is better)
Translates to: GSAGSCPPTAPLRGA*GPAGTSPGPGCGST
Trigger: TGTACTTCCGCATCCAGGACCTGGAGATGTTCCAGCCGGGCCGCATGCACCGCGTAGGGGAGCTGTCGGGGGACAACTACCTGCGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 90 bp CCTGCTCTTCCAGCAGGTCCAGGGCCACTTCCGTGCCGCAGGCGGTaGGCAGGAACTGGGCGAATTTCAGGACCACGTCCACGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: PALPAGPGPLPCRRR*AGTGRISGPRPRRG
Trigger: CCCTCTACGTGGACGTGGTCCTGAAATTCGCCCAGTTCCTGCTCACCGCCTGCGGCACGGAAGTGGCCCTGGACCTGCTGGAAGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAAGCAGGCTGGCCTCTaGAAGTCCGGGAGGATCATG +
Preference number: 5 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSKQAGL*KSGRIM
Trigger: CATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCTT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp GAAGAGCGAGAGCATCAAGCCTTCGAGGTGCTCCCTCACGTCCTCTaGAAGGAGGTCAGGAGACGCCATGGGGGTGCTGCTGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: EEREHQAFEVLPHVL*KEVRRRHGGAAAKG
Trigger: CCCCTTGGCAGCAGCACCCCCATGGCGTCTCCTGACCTCCTTCCAGAGGACGTGAGGGAGCACCTCGAAGGCTTGATGCTCTCGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp TCTGACTCTGACCCCATCGTGTCCCAGCCCGAGTTCTTCTGCAGCTaGCGGAAAAGCAGCTGCCGCTGGAGGCTCCTCAGGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SDSDPIVSQPEFFCS*RKSSCRWRLLRLSR
Trigger: CCTGGAGAGCCTGAGGAGCCTCCAGCGGCAGCTGCTTTTCCGCCAGCTGCAGAAGAACTCGGGCTGGGACACGATGGGGTCAGAGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGAGGCGGGCAGATGGCTaGAGCCCAGGAGTTCGTGAC +
Preference number: 5 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRRRADG*SPGVRD
Trigger: GTCACGAACTCCTGGGCTCAAGCCATCTGCCCGCCT...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 90 bp GAAGCAGGCTGGCCTCTTGAAGTCCGGGAGGATCATGTTCATGGCTaGAGTGAACAGGTCCCCCACGGGCTTTCCGTGGTCGCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: EAGWPLEVREDHVHG*SEQVPHGLSVVAAQ
Trigger: CTGCGCTGCGACCACGGAAAGCCCGTGGGGGACCTGTTCACTGCAGCCATGAACATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCTGTCTGAGGCAGTCATaGAGGCAGCTGCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSCLRQS*RQLLKK
Trigger: CTTCTTCAGCAGCTGCCTCAATGACTGCCTCAGACA...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAAGGAGCGCCTGCCACTaGGCGCGCGTGCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKRSACH*ARVPRE
Trigger: CTCCCGCGGCACGCGCGCCAAGTGGCAGGCGCTCCT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGGTGAGGTTCCAGCTTaGCCACTGCTGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QLTCGMQARLLEQRPSISGEVPA*PLLLLL
Trigger: AAGGAGGAGCAGCAGTGGCAAAGCTGGAACCTCACC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGGTGAGGTTCCAGCTTaGCCACTGCTGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPGEVPA*PLLLLL
Trigger: AAGGAGGAGCAGCAGTGGCAAAGCTGGAACCTCACC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 90 bp TGGATCTGCAGGTCCTTTGGGGAGGAGGGGGTCAGGTTTCGAGGGTaGATCCAGCTGTCATCCAGGCAGGTACCGGCTGGGAGCAGACCA +
Preference number: 5 (lower is better)
Translates to: WICRSFGEEGVRFRG*IQLSSRQVPAGSRP
Trigger: TGGTCTGCTCCCAGCCGGTACCTGCCTGGATGACAGCTGGATTCACCCTCGAAACCTGACCCCCTCCTCCCCAAAGGACCTGCAGATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477874.1
CDS GCA 90 bp CAGCTCAGACTCTGCTCGAAGAGCGAGAGCATCAAGCCTTCGAGGTaGTCCCTCACGTCCTCTGGAAGGAGGTCAGGAGACGCCATGGGG +
Preference number: 5 (lower is better)
Translates to: QLRLCSKSESIKPSR*SLTSSGRRSGDAMG
Trigger: CCCCATGGCGTCTCCTGACCTCCTTCCAGAGGACGTGAGGGAGCACCTCGAAGGCTTGATGCTCTCGCTCTTCGAGCAGAGTCTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp CTGGGGACGCAGCGAACGAACGTTCTGAGGCTTTCTTTTCCGCGGTaGAGTTCGAGTCGGCTCCACTTTGCTCGCTTCCGGCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LGTQRTNVLRLSFPR*SSSRLHFARFRLPA
Trigger: GGCTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTCGAACTCCACCGCGGAAAAGAAAGCCTCAGAACGTTCGTTCGCTGCGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477874.1
ENST00000612619.1
CDS-3UTR CAA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTGGGGTTTCACCATGTaGGCCAGGCTGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPWGFTM*ARLAQT
Trigger: AGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCCA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCTGGGACACAGAGCTTaGGTGGCCCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRLGHRA*VALLPL
Trigger: TAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAG...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCGGCACAAGGAAATTCTaGGACTGGTGGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPGTRKF*DWWFGS
Trigger: GGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCC...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAGCATGTAGTCCGGAATaGGTTCTGGAGTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: QLTCGMQARLLEQRPSISACSPE*VLECLA
Trigger: TGCCAGACACTCCAGAACCAATTCCGGACTACATGC...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS-3UTR CAA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGTGGGGTTTCACCATGTaGGCCAGGCTGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRWGFTM*ARLAQT
Trigger: AGTTTGAGCCAGCCTGGCCAACATGGTGAAACCCCA...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp GGCGTGCTCACAGTCAGGCACAAGGAAATTCTTGGACTGGTGGTTTaGGTCCCCATCAGGGATGGGCTTGGGCAGGTGGTGAACGGTCAC +
Preference number: 5 (lower is better)
Translates to: GVLTVRHKEILGLVV*VPIRDGLGQVVNGH
Trigger: GTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTGAGCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCAACGCACAAACGTTCATaGGTGTTCAGCTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: QLTCGMQARLLEQRPSISTHKRS*VFSCRT
Trigger: TGTCCTGCAGCTGAACACCAATGAACGTTTGTGCGT...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CGCGGGAGTTGGGAGCTTGTTGGTGGCTGCGTGCATAATCGGCCTGGACACAGGCGCAGGAAGAGTGCATaGTGGTATCCTGTACTCTGG +
Preference number: 5 (lower is better)
Translates to: RGSWELVGGCVHNRPGHRRRKSA*WYPVLW
Trigger: CCAGAGTACAGGATACCACAATGCACTCTTCCTGCG...CCTGTGTCCAGGCCGATTATGCACGCAGCCACCAACAAGCTCCCAACTCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCATCTCACTCACCGATTTTGGTTaGCCAGGCATATCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: QLTCGMQARLLEQRPSISLTDFG*PGISEG
Trigger: GCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAG...TGAGATGGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 90 bp TCGAGGTACAGGATGCTGGCGTCTGTCTGCAGTGTCCATTCGATGTaGGCCACGGGGAACAGGTCTCCTTGTTGGGTGTGGGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SRYRMLASVCSVHSM*ATGNRSPCWVWAKC
Trigger: GCACTTTGCCCACACCCAACAAGGAGACCTGTTCCCCGTGGCTCACATCGAATGGACACTGCAGACAGACGCCAGCATCCTGTACCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS TCA 90 bp GACTGGTGGTTTGGGTCCCCATCAGGGATGGGCTTGGGCAGGTGGTaGACGGTCACCTCATATTCCTGGTCAGGGTCAACCACAAAGTGG +
Preference number: 5 (lower is better)
Translates to: DWWFGSPSGMGLGRW*TVTSYSWSGSTTKW
Trigger: CCACTTTGTGGTTGACCCTGACCAGGAATATGAGGTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS TCA 90 bp CTCAAACACCTCTTCGTCCAGGGACGGGGCATCCTGGTCATCTGCTaGGTAGAGGTTCTCACATTCGAACCAGTCGGGACAGCGGACCTG +
Preference number: 5 (lower is better)
Translates to: LKHLFVQGRGILVIC*VEVLTFEPVGTADL
Trigger: CAGGTCCGCTGTCCCGACTGGTTCGAATGTGAGAACCTCTACTCAGCAGATGACCAGGATGCCCCGTCCCTGGACGAAGAGGTGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCGACACAGTTGACTTGTGGGATGCAGGCCCGGCTGCTGGAGCAGCGGCCCTCCAGGCCATCGGTGTATTaGGTGTCATCACTGTATTTT +
Preference number: 5 (lower is better)
Translates to: PTQLTCGMQARLLEQRPSRPSVY*VSSLYF
Trigger: AAAATACAGTGATGACACCAAATACACCGATGGCCT...GGAGGGCCGCTGCTCCAGCAGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACAAGCAGGCTGGCCTCTaGAAGTCCGGGAGGATCATG +
Preference number: 5 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYKQAGL*KSGRIM
Trigger: CATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCTT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAAGGCGGGCAGATGGCTaGAGCCCAGGAGTTCGTGAC +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPRRADG*SPGVRD
Trigger: GTCACGAACTCCTGGGCTCAAGCCATCTGCCCGCCT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 90 bp TGGATCTGCAGGTCCTTTGGGGAGGAGGGGGTCAGGTTTCGAGGGTaGATCCAGCTGTCATCCAGGCAGGTACTATTCTTGACCGTGCAG +
Preference number: 5 (lower is better)
Translates to: WICRSFGEEGVRFRG*IQLSSRQVLFLTVQ
Trigger: CTGCACGGTCAAGAATAGTACCTGCCTGGATGACAGCTGGATTCACCCTCGAAACCTGACCCCCTCCTCCCCAAAGGACCTGCAGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp GTACACCCACAGGGGCATGTAGTCCGGAATTGGTTCTGGAGTGTCTaGCATTTCTGGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: VHPQGHVVRNWFWSV*HFWAGNSRGVSEAV
Trigger: GACTGCCTCAGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGACTACATGCCCCTGTGGGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS CCA 90 bp GCTGACCTCGCTGAAGTAGCAGACTACGTAGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCCGGGAGGATCATGTTCATGGCTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: ADLAEVADYVGAEAG*PLEVREDHVHGCSE
Trigger: TTCACTGCAGCCATGAACATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCTTCGGCACCTACGTAGTCTGCTACTTCAGCGAGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGAACAGGTCTCCTTGTaGGGTGTGGGCAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: MGHTPSGTQSFGGPATTREQVSL*GVGKVQ
Trigger: CTGCACTTTGCCCACACCCAACAAGGAGACCTGTTC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACGAACAGGTCTCCTTGTaGGGTGTGGGCAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYEQVSL*GVGKVQ
Trigger: CTGCACTTTGCCCACACCCAACAAGGAGACCTGTTC...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGGGCTGGATCTGCACTaGGTGGCGACAGCACCCTTT +
Preference number: 5 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCGLDLH*VATAPF
Trigger: AAAGGGTGCTGTCGCCACCAAGTGCAGATCCAGCCC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGGGAGTTGGGAGCTTGTaGGTGGCTGCGTGCATAATC +
Preference number: 5 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRGVGSL*VAACII
Trigger: GATTATGCACGCAGCCACCAACAAGCTCCCAACTCC...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCATCCGACACAGTTGACTaGTGGGATGCAGGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPSDTVD*WDAGPA
Trigger: AGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGGA...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp GGAAATTCTTGGACTGGTGGTTTGGGTCCCCATCAGGGATGGGCTTaGGCAGGTGGTGAACGGTCACCTCATATTCCTGGTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: GNSWTGGLGPHQGWA*AGGERSPHIPGQGQ
Trigger: TTGACCCTGACCAGGAATATGAGGTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp GCACAAGGAAATTCTTGGACTGGTGGTTTGGGTCCCCATCAGGGATaGGCTTGGGCAGGTGGTGAACGGTCACCTCATATTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: AQGNSWTGGLGPHQG*AWAGGERSPHIPGQ
Trigger: CTGACCAGGAATATGAGGTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp CAGCACCCTTTAAGGTTGCGTAGAGTGAGTGTGACGTTGGATCGCTaGTGGAACTCTTCTGGTCTGGGCGCAGGTATGTGGTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: QHPLRLRRVSVTLDR*WNSSGLGAGMWCMC
Trigger: GCACATGCACCACATACCTGCGCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGTCACACTCACTCTACGCAACCTTAAAGGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 90 bp CAGGGGCATGTAGTCCGGAATTGGTTCTGGAGTGTCTGGCATTTCTaGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTCATTGAGGCA +
Preference number: 5 (lower is better)
Translates to: QGHVVRNWFWSVWHF*AGNSRGVSEAVIEA
Trigger: TGCCTCAATGACTGCCTCAGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGACTACATGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS CCA 90 bp TTCACTTCCAGGCCCCGGAATTGGTTCTGGAGTGTCTGGCATTTCTaGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTCATTGAGGCA +
Preference number: 5 (lower is better)
Translates to: FTSRPRNWFWSVWHF*AGNSRGVSEAVIEA
Trigger: TGCCTCAATGACTGCCTCAGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGGGCCTGGAAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACAGGCAGGTACTATTCTaGACCGTGCAGTTTAGCCCC +
Preference number: 5 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYRQVLF*TVQFSP
Trigger: GGGGCTAAACTGCACGGTCAAGAATAGTACCTGCCT...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGAGAGTGAGTGTGACGTaGGATCGCTGGTGGAACTCT +
Preference number: 5 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRRVSVT*DRWWNS
Trigger: AGAGTTCCACCAGCGATCCAACGTCACACTCACTCT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAGGGCTGGATCTGCACTaGGTGGCGACAGCACCCTTT +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKGLDLH*VATAPF
Trigger: AAAGGGTGCTGTCGCCACCAAGTGCAGATCCAGCCC...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTGTCTGAGGCAGTCATaGAGGCAGCTGCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYCLRQS*RQLLKK
Trigger: CTTCTTCAGCAGCTGCCTCAATGACTGCCTCAGACA...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATCCGACACAGTTGACTaGTGGGATGCAGGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKSDTVD*WDAGPA
Trigger: AGCCGGGCCTGCATCCCACAAGTCAACTGTGTCGGA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCCTCTGTCCGACACAGTaGACTTGTGGGATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCLCPTQ*TCGMQA
Trigger: GGCCTGCATCCCACAAGTCAACTGTGTCGGACAGAG...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCGGGGATACTGCAGGCTaGCCAGGACCCCATGAGGTG +
Preference number: 5 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSGDTAG*PGPHEV
Trigger: CACCTCATGGGGTCCTGGCAAGCCTGCAGTATCCCC...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCATTAACATGAACAGCTaGTGCAATGGGTTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPINMNS*CNGFRG
Trigger: ACCCCTAAACCCATTGCACAAGCTGTTCATGTTAAT...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGACACTCTTGAAGCTCTaGGCATTCAGCGGACAGCAA +
Preference number: 5 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRTLLKL*AFSGQQ
Trigger: TTGCTGTCCGCTGAATGCCAAGAGCTTCAAGAGTGT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCTTCGGTAGTCGGCTGTaGCTTGGGTCCAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCFGSRL*LGSSFL
Trigger: AAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCGAGTCGGCTCCACTTaGCTCGCTTCCGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQRVGST*LASGFQ
Trigger: CTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTCG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS-3UTR CAA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGCTGCCCAGGCTGGATaGCAATGGTACCATTATAGC +
Preference number: 5 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCAAQAG*QWYHYS
Trigger: GCTATAATGGTACCATTGCAATCCAGCCTGGGCAGC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACCACAAACTGCTTCCTaGCTGGGACTACGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKPQTAS*LGLRFP
Trigger: GGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAACCACAAACTGCTTCCTaGCTGGGACTACGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKPQTAS*LGLRFP
Trigger: GGGAAAGCGTAGTCCCAGCAAGGAAGCAGTTTGTGG...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGGTCCTTTGCTGCTGTaGGGTGGATTATGGGCCATA +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPGPLLL*GGLWAI
Trigger: TATGGCCCATAATCCACCCAACAGCAGCAAAGGACC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CTCAGGACTGATGCGCACAAGGCTGTCCCCACCCCTGAGCTCTGGCGACATCCCTCAAACAGTTATTTATaGGAAGCTAGGGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LRTDAHKAVPTPELWRHPSNSYL*EARERS
Trigger: TGACCTTTCCCTAGCTTCCAATAAATAACTGTTTGA...GGGATGTCGCCAGAGCTCAGGGGTGGGGACAGCCTTGTGCGCATCAGTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTCTCTGTCCGACACAGTaGACTTGTGGGATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFLCPTQ*TCGMQA
Trigger: GGCCTGCATCCCACAAGTCAACTGTGTCGGACAGAG...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGTAGTCGGCTGTTGCTaGGGTCCAGCTTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKVVGCC*GPASFP
Trigger: TGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTAC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATTCGGTAGTCGGCTGTaGCTTGGGTCCAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKFGSRL*LGSSFL
Trigger: AAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 90 bp GACAGAAACTCAAACCTGACGCACAAACGTTCATTGGTGTTCAGCTaGAGGACAGATAACTCTGCACCCTCGAGGTACAGGATGCTGGCG +
Preference number: 5 (lower is better)
Translates to: DRNSNLTHKRSLVFS*RTDNSAPSRYRMLA
Trigger: CGCCAGCATCCTGTACCTCGAGGGTGCAGAGTTATCTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS GCA 90 bp TTTCCTGACTTTTGCATAATGAATGTTCTCGACAGGAAGCGCAGGTaGACGCATCCACAATTCTCCGGGAACCCTCCTGCGGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: FPDFCIMNVLDRKRR*THPQFSGNPPADGC
Trigger: ACAGCCATCCGCAGGAGGGTTCCCGGAGAATTGTGGATGCGTGCACCTGCGCTTCCTGTCGAGAACATTCATTATGCAAAAGTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459971.1
CDS-3UTR CAA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTCAGCACCCTTTAAGGTaGCGTAGAGTGAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFQHPLR*RRVSVT
Trigger: CGTCACACTCACTCTACGCAACCTTAAAGGGTGCTG...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAACAGCACCCTTTAAGGTaGCGTAGAGTGAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKQHPLR*RRVSVT
Trigger: CGTCACACTCACTCTACGCAACCTTAAAGGGTGCTG...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAACGATGATCTTAGAGTaGCTCTCCACCATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPTMILE*LSTISC
Trigger: GCAGGAGATGGTGGAGAGCAACTCTAAGATCATCGT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCCTGGAGATAGTAGGCAATGCCCATCAGGACATTTACTGGCATGGGCTCAAAGCTGCCCAGGCTGGATaGCAATGGTACCATTATAGC +
Preference number: 5 (lower is better)
Translates to: ALEIVGNAHQDIYWHGLKAAQAG*QWYHYS
Trigger: GCTATAATGGTACCATTGCAATCCAGCCTGGGCAGC...TTTGAGCCCATGCCAGTAAATGTCCTGATGGGCATTGCCTACTATCTCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTCCTTTGCCTGGTCCTTaGCTGCTGTTGGGTGGATTA +
Preference number: 5 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFPLPGP*LLLGGL
Trigger: TAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGG...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAACACTCTTGAAGCTCTaGGCATTCAGCGGACAGCAA +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPTLLKL*AFSGQQ
Trigger: TTGCTGTCCGCTGAATGCCAAGAGCTTCAAGAGTGT...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGGCGGGAGTTGGGAGCTaGTTGGTGGCTGCGTGCATA +
Preference number: 5 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWAGVGS*LVAACI
Trigger: TATGCACGCAGCCACCAACAAGCTCCCAACTCCCGC...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAACTCTACGCGGGAGTaGGGAGCTTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQNSTRE*GACWWL
Trigger: CAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGTT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGATATCCATCATACCCTaGCATTCAGAGATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRISIIP*HSEIPA
Trigger: AGCTGGGATCTCTGAATGCAAGGGTATGATGGATAT...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAATGGCGCTCACCGATTTaGGTTTGCCAGGCATATCAG +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKWRSPI*VCQAYQ
Trigger: CTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCA...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTTCCAGGCCCCGGAATaGGTTCTGGAGTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQFQAPE*VLECLA
Trigger: TGCCAGACACTCCAGAACCAATTCCGGGGCCTGGAA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS TCA 90 bp GCCACCGCCTGTGGTGATGCCTCAGTTTGGACAGAAACTCAAACCTaGCGCACAAACGTTCATTGGTGTTCAGCTGCAGGACAGATAACT +
Preference number: 5 (lower is better)
Translates to: ATACGDASVWTETQT*RTNVHWCSAAGQIT
Trigger: AGTTATCTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGTCCAAACTGAGGCATCACCACAGGCGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGTCTTGGACTGGTGGTTaGGGTCCCCATCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWSWTGG*GPHQGW
Trigger: CCATCCCTGATGGGGACCCAAACCACCAGTCCAAGA...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTTGTGACAGGTGCAGTAGGGACGCGGAGTGATCTCTTCACGTGTAGGCAATGCGCAACTAGCAACTTCTaGACCTACAGTAAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: FVTGAVGTRSDLFTCRQCATSNF*TYSKWL
Trigger: GAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTGC...GCATTGCCTACACGTGAAGAGATCACTCCGCGTCCCTACTGCACCTGTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCAGCAACTAGCAACTTCTaGACCTACAGTAAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPATSNF*TYSKWL
Trigger: GAGCCACTTACTGTAGGTCAAGAAGTTGCTAGTTGC...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTACTGGGACACAGAGCTTaGGTGGCCCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: EALGIQRTANTILRVMELLGHRA*VALLPL
Trigger: TAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAG...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ATGGGCCATACACCATCTGGGACACAGAGCTTTGGTGGCCCTGCTACCACTAGGTATTTACACACACTCTaGAAGCTCTTGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: MGHTPSGTQSFGGPATTRYLHTL*KLLAFS
Trigger: GCTGAATGCCAAGAGCTTCAAGAGTGTGTGTAAATA...CCTAGTGGTAGCAGGGCCACCAAAGCTCTGTGTCCCAGATGGTGTATGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGGAGTTGGGAGCTTGTaGGTGGCTGCGTGCATAATC +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQGVGSL*VAACII
Trigger: GATTATGCACGCAGCCACCAACAAGCTCCCAACTCC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TCCAGTGAGCGAACTCATCTTATAGTCAATGACCTAAGGGGTTATTCCTCCTGGAACTCTACGCGGGAGTaGGGAGCTTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSERTHLIVNDLRGYSSWNSTRE*GACWWL
Trigger: CAGCCACCAACAAGCTCCCAACTCCCGCGTAGAGTT...CCAGGAGGAATAACCCCTTAGGTCATTGACTATAAGATGAGTTCGCTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp AAGCAAGCTGGCGCTCACCGATTTTGGTTTGCCAGGCATATCAGAAGGCACTTTTGGCGCTCACCGATTTaGGTTTGCCAGGCATATCAG +
Preference number: 5 (lower is better)
Translates to: KQAGAHRFWFARHIRRHFWRSPI*VCQAYQ
Trigger: CTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCA...AAAGTGCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAGCGCCAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGAGGCAGGTACTATTCTaGACCGTGCAGTTTAGCCCC +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQRQVLF*TVQFSP
Trigger: GGGGCTAAACTGCACGGTCAAGAATAGTACCTGCCT...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGGGCACAAGGAAATTCTaGGACTGGTGGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQGTRKF*DWWFGS
Trigger: GGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCC...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCCTTTGCCTGGTCCTTaGCTGCTGTTGGGTGGATTA +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQPLPGP*LLLGGL
Trigger: TAATCCACCCAACAGCAGCAAAGGACCAGGCAAAGG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCCTTTCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACCCCATGGAATCCATATaGTTGCCATTTTTCCACAAT +
Preference number: 5 (lower is better)
Translates to: AFPVHAHNPGQASTPSFYPMESI*LPFFHN
Trigger: ATTGTGGAAAAATGGCAACAATATGGATTCCATGGG...GTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAGTAGTCGGCTGTTGCTaGGGTCCAGCTTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: EALGIQRTANTILRVMELVVGCC*GPASFP
Trigger: TGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTAC...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAGGTCCTTTGCTGCTGTaGGGTGGATTATGGGCCATA +
Preference number: 5 (lower is better)
Translates to: EALGIQRTANTILRVMELGPLLL*GGLWAI
Trigger: TATGGCCCATAATCCACCCAACAGCAGCAAAGGACC...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TCCCGTGCATGCTCACAACCCTGGGCAGGCTTCCACTCCATCTTTCTACTTTTTATATCCATCATACCCTaGCATTCAGAGATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SRACSQPWAGFHSIFLLFISIIP*HSEIPA
Trigger: AGCTGGGATCTCTGAATGCAAGGGTATGATGGATAT...AAAAAGTAGAAAGATGGAGTGGAAGCCTGCCCAGGGTTGTGAGCATGCACGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGCTCACCGATTTTGGTTaGCCAGGCATATCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQLTDFG*PGISEG
Trigger: GCCTTCTGATATGCCTGGCAAACCAAAATCGGTGAG...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAAGGCCATCGGTGTATTaGGTGTCATCACTGTATTTT +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKRPSVY*VSSLYF
Trigger: AAAATACAGTGATGACACCAAATACACCGATGGCCT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GAAGCTCTTGGCATTCAGCGGACAGCAAACACCATACTCAGAGTGATGGAATTAACGATGATCTTAGAGTaGCTCTCCACCATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EALGIQRTANTILRVMELTMILE*LSTISC
Trigger: GCAGGAGATGGTGGAGAGCAACTCTAAGATCATCGT...TAATTCCATCACTCTGAGTATGGTGTTTGCTGTCCGCTGAATGCCAAGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp TTCGGTAGTCGGCTGTTGCTTGGGTCCAGCTTCCTTTCCATGAAAGCTCAGCCACCCATGGAATCCATATaGTTGCCATTTTTCCACAAT +
Preference number: 5 (lower is better)
Translates to: FGSRLLLGSSFLSMKAQPPMESI*LPFFHN
Trigger: ATTGTGGAAAAATGGCAACAATATGGATTCCATGGG...TGGCTGAGCTTTCATGGAAAGGAAGCTGGACCCAAGCAACAGCCGACTACCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp GCTGTGTGGATTCCCCTGGGGATAGACGATAACCAGACCGCTGCACAAAGAAAAATTAACATGAACAGCTaGTGCAATGGGTTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: AVWIPLGIDDNQTAAQRKINMNS*CNGFRG
Trigger: ACCCCTAAACCCATTGCACAAGCTGTTCATGTTAAT...TTTTCTTTGTGCAGCGGTCTGGTTATCGTCTATCCCCAGGGGAATCCACACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp ACCAGACCGCTGCACAAAGAAAAGTTAGGAGGGATGCCTGGGATTAAAATCCAGTATTTACACACACTCTaGAAGCTCTTGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: TRPLHKEKLGGMPGIKIQYLHTL*KLLAFS
Trigger: GCTGAATGCCAAGAGCTTCAAGAGTGTGTGTAAATA...CTGGATTTTAATCCCAGGCATCCCTCCTAACTTTTCTTTGTGCAGCGGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS-3UTR CAA 90 bp CCTACCCCCAGGAGGTACTTCAGGAACAAATTCTTCAAACACTGGCTTCAGAGCTCAAACAGTTATTTATaGGAAGCTAGGGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: PTPRRYFRNKFFKHWLQSSNSYL*EARERS
Trigger: TGACCTTTCCCTAGCTTCCAATAAATAACTGTTTGA...GCTCTGAAGCCAGTGTTTGAAGAATTTGTTCCTGAAGTACCTCCTGGGGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 90 bp AGATACAGTAGGGCAGCTCCCCAGAGAATACTTTCACAATCCAAATaGCAGTTCTGTTTCTCCTTTCCTGACTTTTGCATAATGAATGTT +
Preference number: 5 (lower is better)
Translates to: RYSRAAPQRILSQSK*QFCFSFPDFCIMNV
Trigger: AACATTCATTATGCAAAAGTCAGGAAAGGAGAAACAGAACTGTCATTTGGATTGTGAAAGTATTCTCTGGGGAGCTGCCCTACTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459971.1
CDS GCA 72 bp GGAGGAAGAGGACGCTATTTCGCCCAGCGCCCGGGCTaGCCAGCAGCGGGCAGGCCTCGCCCTCCCCCGCCA +
Preference number: 6 (lower is better)
Translates to: GGRGRYFAQRPG*PAAGRPRPPPP
Trigger: TGGCGGGGGAGGGCGAGGCCTGCCCGCTGCTGGGCAGCCCGGGCGCTGGGCGAAATAGCGTCCTCTTCCTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp CGCCCGCTTCACGATGCCGGTTCCCGGAGGCAGCAGTaGCTCCTCAAACACCTCTTCGTCCAGGGACGGGGC +
Preference number: 6 (lower is better)
Translates to: RPLHDAGSRRQQ*LLKHLFVQGRG
Trigger: GCCCCGTCCCTGGACGAAGAGGTGTTTGAGGAGCCACTGCTGCCTCCGGGAACCGGCATCGTGAAGCGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp CCCACCCAGGTCATGACTCCTGCCTCCGAGATGGCCTaGTCTTCCAGCAGGTCCAGGGCCACTTCCGTGCCG +
Preference number: 6 (lower is better)
Translates to: PTQVMTPASEMA*SSSRSRATSVP
Trigger: CGGCACGGAAGTGGCCCTGGACCTGCTGGAAGAGCAGGCCATCTCGGAGGCAGGAGTCATGACCTGGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp GGTAGTTGTCCCCCGACAGCTCCCCTACGCGGTGCATaGGGCCCGGCTGGAACATCTCCAGGTCCTGGATGC +
Preference number: 6 (lower is better)
Translates to: GSCPPTAPLRGA*GPAGTSPGPGC
Trigger: GCATCCAGGACCTGGAGATGTTCCAGCCGGGCCGCATGCACCGCGTAGGGGAGCTGTCGGGGGACAACTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp AGGTTCTCACATTCGAACCAGTCGGGACAGCGGACCTaGCAGTCCCGGAACCTGTCCAGGGCGGCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RFSHSNQSGQRT*QSRNLSRAARS
Trigger: GCTCCGCGCCGCCCTGGACAGGTTCCGGGACTGGCAGGTCCGCTGTCCCGACTGGTTCGAATGTGAGAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp TTCTTTTCCGCGGTGGAGTTCGAGTCGGCTCCACTTTaGTCGCTTCCGGCTTCCAGCCCGGGCCCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: FFSAVEFESAPL*SLPASSPGPGA
Trigger: CGCCCCTGGGCCCGGGCTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTCGAACTCCACCGCGGAAAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477874.1
CDS CCA 72 bp CCCGACAGCTCCCCTACGCGGTGCATGCGGCCCGGCTaGAACATCTCCAGGTCCTGGATGCGGAAGTACACC +
Preference number: 6 (lower is better)
Translates to: PDSSPTRCMRPG*NISRSWMRKYT
Trigger: GGTGTACTTCCGCATCCAGGACCTGGAGATGTTCCAGCCGGGCCGCATGCACCGCGTAGGGGAGCTGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 72 bp CCAGCAGGTCCAGGGCCACTTCCGTGCCGCAGGCGGTaGGCAGGAACTGGGCGAATTTCAGGACCACGTCCA +
Preference number: 6 (lower is better)
Translates to: PAGPGPLPCRRR*AGTGRISGPRP
Trigger: TGGACGTGGTCCTGAAATTCGCCCAGTTCCTGCTCACCGCCTGCGGCACGGAAGTGGCCCTGGACCTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp GACCCCATCGTGTCCCAGCCCGAGTTCTTCTGCAGCTaGCGGAAAAGCAGCTGCCGCTGGAGGCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: DPIVSQPEFFCS*RKSSCRWRLLR
Trigger: CCTGAGGAGCCTCCAGCGGCAGCTGCTTTTCCGCCAGCTGCAGAAGAACTCGGGCTGGGACACGATGGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 72 bp TTTCTTTTCCGCGGTGGAGTTCGAGTCGGCTCCACTTaGCTCGCTTCCGGCTTCCAGCCCGGGCCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: FLFRGGVRVGST*LASGFQPGPRG
Trigger: GCCCCTGGGCCCGGGCTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTCGAACTCCACCGCGGAAAAGAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477874.1
CDS CCA 72 bp TACGTGCACACACACTCCTCTCTCAAAGCTGGGATCTaGGCGGTCCCTGGGGAGCCGCCCTCATGCACTGGG +
Preference number: 6 (lower is better)
Translates to: YVHTHSSLKAGI*AVPGEPPSCTG
Trigger: CCCAGTGCATGAGGGCGGCTCCCCAGGGACCGCCCAGATCCCAGCTTTGAGAGAGGAGTGTGTGTGCACGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 72 bp AGGTCCTTTGGGGAGGAGGGGGTCAGGTTTCGAGGGTaGATCCAGCTGTCATCCAGGCAGGTACCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RSFGEEGVRFRG*IQLSSRQVPAG
Trigger: CCCAGCCGGTACCTGCCTGGATGACAGCTGGATTCACCCTCGAAACCTGACCCCCTCCTCCCCAAAGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477874.1
CDS CCA 72 bp GAGCATCAAGCCTTCGAGGTGCTCCCTCACGTCCTCTaGAAGGAGGTCAGGAGACGCCATGGGGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: EHQAFEVLPHVL*KEVRRRHGGAA
Trigger: AGCAGCACCCCCATGGCGTCTCCTGACCTCCTTCCAGAGGACGTGAGGGAGCACCTCGAAGGCTTGATGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp ACGGGGAACAGGTCTCCTTGTTGGGTGTGGGCAAAGTaGAGCTGGATCTGCAGGTCCTTTGGGGAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: TGNRSPCWVWAK*SWICRSFGEEG
Trigger: CCCCTCCTCCCCAAAGGACCTGCAGATCCAGCTGCACTTTGCCCACACCCAACAAGGAGACCTGTTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS TCA 72 bp TTTCAGGACCACGTCCACGTAGAGGGGGTGGTCGGCTaGGTAGATGATCCAGACCTTCCTGGGCTTCAGCGG +
Preference number: 6 (lower is better)
Translates to: FQDHVHVEGVVG*VDDPDLPGLQR
Trigger: CCGCTGAAGCCCAGGAAGGTCTGGATCATCTACTCAGCCGACCACCCCCTCTACGTGGACGTGGTCCTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp TGGCCTCTTGAAGTCCGGGAGGATCATGTTCATGGCTaGAGTGAACAGGTCCCCCACGGGCTTTCCGTGGTC +
Preference number: 6 (lower is better)
Translates to: WPLEVREDHVHG*SEQVPHGLSVV
Trigger: GACCACGGAAAGCCCGTGGGGGACCTGTTCACTGCAGCCATGAACATGATCCTCCCGGACTTCAAGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp CTCTGCTCGAAGAGCGAGAGCATCAAGCCTTCGAGGTaGTCCCTCACGTCCTCTGGAAGGAGGTCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: LCSKSESIKPSR*SLTSSGRRSGD
Trigger: GTCTCCTGACCTCCTTCCAGAGGACGTGAGGGAGCACCTCGAAGGCTTGATGCTCTCGCTCTTCGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp AACAGGTCTCCTTGTTGGGTGTGGGCAAAGTGCAGCTaGATCTGCAGGTCCTTTGGGGAGGAGGGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: NRSPCWVWAKCS*ICRSFGEEGVR
Trigger: CCTGACCCCCTCCTCCCCAAAGGACCTGCAGATCCAGCTGCACTTTGCCCACACCCAACAAGGAGACCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CAA 90 bp TGGCGTGCTCACAGTCAGGCACAAGGAAATTCTTGGACTGGTGGTTaGGGTCCCCATCAGGGATGGGCTTGGGCAGGTGGTGAACGGTCA +
Preference number: 6 (lower is better)
Translates to: WRAHSQAQGNSWTGG*GPHQGWAWAGGERS
Trigger: TGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTGAGCACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 90 bp GGCATTTCTGGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTCATaGAGGCAGCTGCTGAAGAAGGGCTGGATCTGCACTTGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: GISGQETVAECLRQS*RQLLKKGWICTWWR
Trigger: TCGCCACCAAGTGCAGATCCAGCCCTTCTTCAGCAGCTGCCTCAATGACTGCCTCAGACACTCCGCGACTGTTTCCTGCCCAGAAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 72 bp AGGATGCTGGCGTCTGTCTGCAGTGTCCATTCGATGTaGGCCACGGGGAACAGGTCTCCTTGTTGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: RMLASVCSVHSM*ATGNRSPCWVW
Trigger: CCACACCCAACAAGGAGACCTGTTCCCCGTGGCTCACATCGAATGGACACTGCAGACAGACGCCAGCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS TCA 72 bp TTTGGGTCCCCATCAGGGATGGGCTTGGGCAGGTGGTaGACGGTCACCTCATATTCCTGGTCAGGGTCAACC +
Preference number: 6 (lower is better)
Translates to: FGSPSGMGLGRW*TVTSYSWSGST
Trigger: GGTTGACCCTGACCAGGAATATGAGGTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CCA 72 bp TGGACTGGTGGTTTGGGTCCCCATCAGGGATGGGCTTaGGCAGGTGGTGAACGGTCACCTCATATTCCTGGT +
Preference number: 6 (lower is better)
Translates to: WTGGLGPHQGWA*AGGERSPHIPG
Trigger: ACCAGGAATATGAGGTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CCA 72 bp GCGTGCTCACAGTCAGGCACAAGGAAATTCTTGGACTaGTGGTTTGGGTCCCCATCAGGGATGGGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: ACSQSGTRKFLD*WFGSPSGMGLG
Trigger: GCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTGAGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp CAGCGAACGAACGTTCTGAGGCTTTCTTTTCCGCGGTaGAGTTCGAGTCGGCTCCACTTTGCTCGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: QRTNVLRLSFPR*SSSRLHFARFR
Trigger: CCGGAAGCGAGCAAAGTGGAGCCGACTCGAACTCCACCGCGGAAAAGAAAGCCTCAGAACGTTCGTTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477874.1
ENST00000612619.1
CDS CCA 72 bp AGGCCCCGGAATTGGTTCTGGAGTGTCTGGCATTTCTaGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: RPRNWFWSVWHF*AGNSRGVSEAV
Trigger: GACTGCCTCAGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS CAA 72 bp GGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTCATaGAGGCAGCTGCTGAAGAAGGGCTGGATCTGCACT +
Preference number: 6 (lower is better)
Translates to: GQETVAECLRQS*RQLLKKGWICT
Trigger: AGTGCAGATCCAGCCCTTCTTCAGCAGCTGCCTCAATGACTGCCTCAGACACTCCGCGACTGTTTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 90 bp TGTCTGCAGTGTCCATTCGATGTGAGCCACGGGGAACAGGTCTCCTaGTTGGGTGTGGGCAAAGTGCAGCTGGATCTGCAGGTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: CLQCPFDVSHGEQVS*LGVGKVQLDLQVLW
Trigger: CCAAAGGACCTGCAGATCCAGCTGCACTTTGCCCACACCCAACAAGGAGACCTGTTCCCCGTGGCTCACATCGAATGGACACTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CAA 90 bp TGGTGGCGACAGCACCCTTTAAGGTTGCGTAGAGTGAGTGTGACGTaGGATCGCTGGTGGAACTCTTCTGGTCTGGGCGCAGGTATGTGG +
Preference number: 6 (lower is better)
Translates to: WWRQHPLRLRRVSVT*DRWWNSSGLGAGMW
Trigger: CCACATACCTGCGCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGTCACACTCACTCTACGCAACCTTAAAGGGTGCTGTCGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 72 bp CTCTTCGTCCAGGGACGGGGCATCCTGGTCATCTGCTaGGTAGAGGTTCTCACATTCGAACCAGTCGGGACA +
Preference number: 6 (lower is better)
Translates to: LFVQGRGILVIC*VEVLTFEPVGT
Trigger: TGTCCCGACTGGTTCGAATGTGAGAACCTCTACTCAGCAGATGACCAGGATGCCCCGTCCCTGGACGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp ACAGTCAGGCACAAGGAAATTCTTGGACTGGTGGTTTaGGTCCCCATCAGGGATGGGCTTGGGCAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: TVRHKEILGLVV*VPIRDGLGQVV
Trigger: CACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp TGCTCACAGTCAGGCACAAGGAAATTCTTGGACTGGTaGTTTGGGTCCCCATCAGGGATGGGCTTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: CSQSGTRKFLDW*FGSPSGMGLGR
Trigger: CCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp TCCTGGCGTGCTCACAGTCAGGCACAAGGAAATTCTTaGACTGGTGGTTTGGGTCCCCATCAGGGATGGGCT +
Preference number: 6 (lower is better)
Translates to: SWRAHSQAQGNS*TGGLGPHQGWA
Trigger: AGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTGAGCACGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp AGGTTGCGTAGAGTGAGTGTGACGTTGGATCGCTGGTaGAACTCTTCTGGTCTGGGCGCAGGTATGTGGTGC +
Preference number: 6 (lower is better)
Translates to: RLRRVSVTLDRW*NSSGLGAGMWC
Trigger: GCACCACATACCTGCGCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGTCACACTCACTCTACGCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp GCTGAAGTAGCAGACTACGTAGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCCGGGAGGATCATGTTCATGGC +
Preference number: 6 (lower is better)
Translates to: AEVADYVGAEAG*PLEVREDHVHG
Trigger: GCCATGAACATGATCCTCCCGGACTTCAAGAGGCCAGCCTGCTTCGGCACCTACGTAGTCTGCTACTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp CTGCGGATGGCTGTAGCTCACAGCCTGAACCTGGAGTaGCATGGCAAGACTTCTGTCAGAAGTTGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LRMAVAHSLNLE*HGKTSVRSWQQ
Trigger: CTGCTGCCAACTTCTGACAGAAGTCTTGCCATGCCACTCCAGGTTCAGGCTGTGAGCTACAGCCATCCGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459971.1
CDS CAA 72 bp CACAGTCAGGCACAAGGAAATTCTTGGACTGGTGGTTaGGGTCCCCATCAGGGATGGGCTTGGGCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: HSQAQGNSWTGG*GPHQGWAWAGG
Trigger: ACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 72 bp ATCCTGGCGTGCTCACAGTCAGGCACAAGGAAATTCTaGGACTGGTGGTTTGGGTCCCCATCAGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: ILACSQSGTRKF*DWWFGSPSGMG
Trigger: GCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATTTCCTTGTGCCTGACTGTGAGCACGCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS TCA 72 bp AGGTCCTTTGGGGAGGAGGGGGTCAGGTTTCGAGGGTaGATCCAGCTGTCATCCAGGCAGGTACTATTCTTG +
Preference number: 6 (lower is better)
Translates to: RSFGEEGVRFRG*IQLSSRQVLFL
Trigger: CAAGAATAGTACCTGCCTGGATGACAGCTGGATTCACCCTCGAAACCTGACCCCCTCCTCCCCAAAGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp GTAGTCCGGAATTGGTTCTGGAGTGTCTGGCATTTCTaGGCAGGAAACAGTCGCGGAGTGTCTGAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: VVRNWFWSVWHF*AGNSRGVSEAV
Trigger: GACTGCCTCAGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS CCA 72 bp CAGGGGCATGTAGTCCGGAATTGGTTCTGGAGTGTCTaGCATTTCTGGGCAGGAAACAGTCGCGGAGTGTCT +
Preference number: 6 (lower is better)
Translates to: QGHVVRNWFWSV*HFWAGNSRGVS
Trigger: AGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGACTACATGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS CCA 72 bp GTACACCCACAGGGGCATGTAGTCCGGAATTGGTTCTaGAGTGTCTGGCATTTCTGGGCAGGAAACAGTCGC +
Preference number: 6 (lower is better)
Translates to: VHPQGHVVRNWF*SVWHFWAGNSR
Trigger: GCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGACTACATGCCCCTGTGGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319363.11
CDS CCA 72 bp TTCACTTCCAGGCCCCGGAATTGGTTCTGGAGTGTCTaGCATTTCTGGGCAGGAAACAGTCGCGGAGTGTCT +
Preference number: 6 (lower is better)
Translates to: FTSRPRNWFWSV*HFWAGNSRGVS
Trigger: AGACACTCCGCGACTGTTTCCTGCCCAGAAATGCCAGACACTCCAGAACCAATTCCGGGGCCTGGAAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612619.1
CDS CAA 72 bp CAGCACCCTTTAAGGTTGCGTAGAGTGAGTGTGACGTaGGATCGCTGGTGGAACTCTTCTGGTCTGGGCGCA +
Preference number: 6 (lower is better)
Translates to: QHPLRLRRVSVT*DRWWNSSGLGA
Trigger: TGCGCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGTCACACTCACTCTACGCAACCTTAAAGGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 72 bp TGGATCTGCACTTGGTGGCGACAGCACCCTTTAAGGTaGCGTAGAGTGAGTGTGACGTTGGATCGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: WICTWWRQHPLR*RRVSVTLDRWW
Trigger: CCACCAGCGATCCAACGTCACACTCACTCTACGCAACCTTAAAGGGTGCTGTCGCCACCAAGTGCAGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp TGGTGGAACTCTTCTGGTCTGGGCGCAGGTATGTGGTaGATGTGCTCAAAGCAACTGTGGTTCTCCATGTGC +
Preference number: 6 (lower is better)
Translates to: WWNSSGLGAGMW*MCSKQLWFSMC
Trigger: GCACATGGAGAACCACAGTTGCTTTGAGCACATGCACCACATACCTGCGCCCAGACCAGAAGAGTTCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp AATTCTTGGACTGGTGGTTTGGGTCCCCATCAGGGATaGGCTTGGGCAGGTGGTGAACGGTCACCTCATATT +
Preference number: 6 (lower is better)
Translates to: NSWTGGLGPHQG*AWAGGERSPHI
Trigger: AATATGAGGTGACCGTTCACCACCTGCCCAAGCCCATCCCTGATGGGGACCCAAACCACCAGTCCAAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CCA 72 bp TGCCTGAGCTCATGCATGGCGTGGTTACCTTCATCCTaGCGTGCTCACAGTCAGGCACAAGGAAATTCTTGG +
Preference number: 6 (lower is better)
Translates to: CLSSCMAWLPSS*RAHSQAQGNSW
Trigger: CCAAGAATTTCCTTGTGCCTGACTGTGAGCACGCCAGGATGAAGGTAACCACGCCATGCATGAGCTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp GGCGCAGGTATGTGGTGCATGTGCTCAAAGCAACTGTaGTTCTCCATGTGCGGAAAACTGGTCAGCAGGATC +
Preference number: 6 (lower is better)
Translates to: GAGMWCMCSKQL*FSMCGKLVSRI
Trigger: GATCCTGCTGACCAGTTTTCCGCACATGGAGAACCACAGTTGCTTTGAGCACATGCACCACATACCTGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CCA 72 bp TTAAGGTTGCGTAGAGTGAGTGTGACGTTGGATCGCTaGTGGAACTCTTCTGGTCTGGGCGCAGGTATGTGG +
Preference number: 6 (lower is better)
Translates to: LRLRRVSVTLDR*WNSSGLGAGMW
Trigger: CCACATACCTGCGCCCAGACCAGAAGAGTTCCACCAGCGATCCAACGTCACACTCACTCTACGCAACCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 90 bp AAGAAGGGCTGGATCTGCACTTGGTGGCGACAGCACCCTTTAAGGTaGCGTAGAGTGAGTGTGACGTTGGATCGCTGGTGGAACTCTTCT +
Preference number: 6 (lower is better)
Translates to: KKGWICTWWRQHPLR*RRVSVTLDRWWNSS
Trigger: AGAAGAGTTCCACCAGCGATCCAACGTCACACTCACTCTACGCAACCTTAAAGGGTGCTGTCGCCACCAAGTGCAGATCCAGCCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS GCA 72 bp TTTTGCATAATGAATGTTCTCGACAGGAAGCGCAGGTaGACGCATCCACAATTCTCCGGGAACCCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: FCIMNVLDRKRR*THPQFSGNPPA
Trigger: CGCAGGAGGGTTCCCGGAGAATTGTGGATGCGTGCACCTGCGCTTCCTGTCGAGAACATTCATTATGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459971.1
CDS GCA 72 bp TCAAACCTGACGCACAAACGTTCATTGGTGTTCAGCTaGAGGACAGATAACTCTGCACCCTCGAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: SNLTHKRSLVFS*RTDNSAPSRYR
Trigger: CCTGTACCTCGAGGGTGCAGAGTTATCTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCGTCAGGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS GCA 72 bp AACTCTTCTGGTCTGGGCGCAGGTATGTGGTGCATGTaGTCAAAGCAACTGTGGTTCTCCATGTGCGGAAAA +
Preference number: 6 (lower is better)
Translates to: NSSGLGAGMWCM*SKQLWFSMCGK
Trigger: TTTTCCGCACATGGAGAACCACAGTTGCTTTGAGCACATGCACCACATACCTGCGCCCAGACCAGAAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319363.11
ENST00000612619.1
CDS CAA 90 bp TGCCTCAGTTTGGACAGAAACTCAAACCTGACGCACAAACGTTCATaGGTGTTCAGCTGCAGGACAGATAACTCTGCACCCTCGAGGTAC +
Preference number: 6 (lower is better)
Translates to: CLSLDRNSNLTHKRS*VFSCRTDNSAPSRY
Trigger: GTACCTCGAGGGTGCAGAGTTATCTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGTCCAAACTGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CAA 90 bp TCACAGCCTGAACCTGGAGTGGCATGGCAAGACTTCTGTCAGAAGTaGGCAGCAGGCTCTCACTTGATTAAGAAGGCAACAAGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: SQPEPGVAWQDFCQK*AAGSHLIKKATRRR
Trigger: TCTTCTTCTTGTTGCCTTCTTAATCAAGTGAGAGCCTGCTGCCAACTTCTGACAGAAGTCTTGCCATGCCACTCCAGGTTCAGGCTGTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459971.1
CDS TCA 72 bp TGTGGTGATGCCTCAGTTTGGACAGAAACTCAAACCTaGCGCACAAACGTTCATTGGTGTTCAGCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: CGDASVWTETQT*RTNVHWCSAAG
Trigger: TCCTGCAGCTGAACACCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGTCCAAACTGAGGCATCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CAA 72 bp TTGGACAGAAACTCAAACCTGACGCACAAACGTTCATaGGTGTTCAGCTGCAGGACAGATAACTCTGCACCC +
Preference number: 6 (lower is better)
Translates to: LDRNSNLTHKRS*VFSCRTDNSAP
Trigger: GGGTGCAGAGTTATCTGTCCTGCAGCTGAACACCAATGAACGTTTGTGCGTCAGGTTTGAGTTTCTGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319363.11
ENST00000477874.1
ENST00000612619.1
CDS CCA 72 bp GAGCTGCTTTATTGTTATATGTCAGGGGTCTCTAATTaGCTCAGACACTTGAATATGTGCCTCTTTGAATTA +
Preference number: 6 (lower is better)
Translates to: ELLYCYMSGVSN*LRHLNMCLFEL
Trigger: TAATTCAAAGAGGCACATATTCAAGTGTCTGAGCCAATTAGAGACCCCTGACATATAACAATAAAGCAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459971.1