Pregenerated sensors for IL17F (Homo sapiens)
Ensembl gene IDs: ENSG00000112116Ensembl transcript IDs: ENST00000336123.5, ENST00000478427.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTaGGTAAGGAGTGGCATTTCTACAGCTTCTTCAGCTGAGTGGATA | + |
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Preference number: 1 (lower is better) Translates to: EVEGIGGQTGLVAEH*VRSGISTASSAEWI Trigger: TATCCACTCAGCTGAAGAAGCTGTAGAAATGCCACTCCTTACCCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| 3UTR TCA 90 bp | GAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGTaGAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: EYFLFPSVQVLLRVL*SGGNWGSDRTCCRA Trigger: TGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| 3UTR-3UTR GCA 90 bp | CACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCTCAGACAGGACTTGTTaGAGAGCACTGGGTAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HIHCEYFLFPSVQVLLRVSDRTC*RALGKE Trigger: CTCCTTACCCAGTGCTCTGCAACAAGTCCTGTCTGA...GACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| 3UTR CCA 72 bp | GGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTaGGTAAGGAGTGGCATTTCTACAGCTTCTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GIGGQTGLVAEH*VRSGISTASSA Trigger: AGCTGAAGAAGCTGTAGAAATGCCACTCCTTACCCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| 3UTR TCA 72 bp | CTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGTaGAGTGGAGGGAATTGGGGGTCAGACAGGACTTGT | + |
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Preference number: 3 (lower is better) Translates to: LFPSVQVLLRVL*SGGNWGSDRTC Trigger: ACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAATAAGACCTGCACGGATGGAAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| 3UTR-3UTR CAA 90 bp | TACATACACACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATGTGAAGTGGAGGGAATaGGGGGTCAGACAGGACTTG | + |
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Preference number: 3 (lower is better) Translates to: YIHTYIVNIFCFHPCRSYVKWRE*GVRQDL Trigger: CAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCAC...ATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTGTGTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGGACCATGGCTGGGCCATaGAGGGTCTTCACTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: PVKWRELGVRQDLLQSTGTMAGP*RVFTVM Trigger: CATGACAGTGAAGACCCTGCATGGCCCAGCCATGGT...CCCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | TCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGGAAACAGAGCAGCCTTaGTGCTTCCTCCGGACGACC | + |
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Preference number: 4 (lower is better) Translates to: SCEVEGIGGQTGLVAEHWETEQP*CFLRTT Trigger: GGTCGTCCGGAGGAAGCACCAAGGCTGCTCTGTTTC...CCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACGTACTTGACCATGGCTaGGCCATGCAGGGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHVLDHG*AMQGLH Trigger: GTGAAGACCCTGCATGGCCCAGCCATGGTCAAGTAC...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACAATTCCAGGGGGAGGTaGAGCGGCTCTCGATGTTAC | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHNSRGR*SGSRCY Trigger: GTAACATCGAGAGCCGCTCCACCTCCCCCTGGAATT...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACACGACCAGGGTCTCTTaGTGGATGGGAACGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHTTRVS*WMGTEF Trigger: GAATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGT...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGCTCTCGATGTTACGTaGCATGGAAACGCGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SPVKWRELGVRQDLLQSTALDVT*HGNALV Trigger: AACCAGCGCGTTTCCATGTCACGTAACATCGAGAGC...AGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | CCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGGAAGTATGTCCTACTTTaGGGATTTTCCGAGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: PVKWRELGVRQDLLQSTGKYVLL*GFSELP Trigger: CGGCAGCTCGGAAAATCCCCAAAGTAGGACATACTT...CCCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | TCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGACCAGGGTCTCTTGCTaGATGGGAACGGAATTCATG | + |
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Preference number: 4 (lower is better) Translates to: SCEVEGIGGQTGLVAEHWTRVSC*MGTEFM Trigger: CATGAATTCCGTTCCCATCCAGCAAGAGACCCTGGT...CCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTACCTCTTACTGCACATaGTGGATGACAGGGGTGACG | + |
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Preference number: 4 (lower is better) Translates to: SPVKWRELGVRQDLLQSTTSYCT*WMTGVT Trigger: CGTCACCCCTGTCATCCACCATGTGCAGTAAGAGGT...AGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| 3UTR CAA 72 bp | GCAGGTCTTATTAAGAGTCCTGTGAAGTGGAGGGAATaGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGLIKSPVKWRE*GVRQDLLQSTG Trigger: CCCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAATAAGACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR TCA 90 bp | TCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGATGTCTTCCTTTCCTTaGGCATTGATGCAGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SCEVEGIGGQTGLVAEHWMSSFP*ALMQPK Trigger: CTTGGGCTGCATCAATGCTCAAGGAAAGGAAGACAT...CCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR TCA 90 bp | TCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGTTATTAAGAGTCCTGTaGAGTGGAGGGAATTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SCEVEGIGGQTGLVAEHWLLRVL*SGGNWG Trigger: CCCCCAATTCCCTCCACTTCACAGGACTCTTAATAA...CCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTCAGCTGAGTGGATATaGACCTCTTACTGCACATGG | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHSAEWI*TSYCTW Trigger: CCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGA...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACAGCACCTTCTCCAACTaGAAAGAAACAGAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHSTFSN*KETEQP Trigger: AGGCTGCTCTGTTTCTTTCCAGTTGGAGAAGGTGCT...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | TCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGCTTGTTGCAGAGCACTaGGTAAGGAGTGGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: SCEVEGIGGQTGLVAEHWLVAEH*VRSGIS Trigger: AGAAATGCCACTCCTTACCCAGTGCTCTGCAACAAG...CCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR TCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTACAGCTTCTTCAGCTaGGTGGATATGCACCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHYSFFS*VDMHLL Trigger: TAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGTA...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | TCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGTCTTCACTGTCATGTTaGGCTGGTGGCTTACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SCEVEGIGGQTGLVAEHWSSLSC*AGGLLC Trigger: ACAAAGTAAGCCACCAGCGCAACATGACAGTGAAGA...CCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACGACATGGAAACGCGCTaGTTTTCATTGATGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: ESCEVEGIGGQTGLVAEHDMETR*FSLMMP Trigger: TGGCATCATCAATGAAAACCAGCGCGTTTCCATGTC...GTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | ATTAAGAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGTCTTACTGCACATGGTaGATGACAGGGGTGACGCAG | + |
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Preference number: 4 (lower is better) Translates to: IKSPVKWRELGVRQDLLQSYCTW*MTGVTQ Trigger: CTGCGTCACCCCTGTCATCCACCATGTGCAGTAAGA...CTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGCTTCTTCAGCTGAGTaGATATGCACCTCTTACTGC | + |
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Preference number: 4 (lower is better) Translates to: SPVKWRELGVRQDLLQSTASSAE*ICTSYC Trigger: GCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGC...AGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR TCA 90 bp | ATTAAGAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGCCTTTCCTTGAGCATTaGTGCAGCCCAAGTTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: IKSPVKWRELGVRQDLLQPFLEH*CSPSSY Trigger: GTAGGAACTTGGGCTGCATCAATGCTCAAGGAAAGG...CTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | ATTAAGAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGTCAGACAGGACTTGTTaGAGAGCACTGGGTAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IKSPVKWRELGVRQDLLQSDRTC*RALGKE Trigger: CTCCTTACCCAGTGCTCTGCAACAAGTCCTGTCTGA...CTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | ATTAAGAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGATATGCACCTCTTACTaGACATGGTGGATGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: IKSPVKWRELGVRQDLLQICTSY*TWWMTG Trigger: CCCTGTCATCCACCATGTGCAGTAAGAGGTGCATAT...CTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTAGGAAGCTCTTTCTGTaGATGTATCTTCCTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SPVKWRELGVRQDLLQSTRKLFL*MYLPVY Trigger: ATACACAGGAAGATACATTCACAGAAAGAGCTTCCT...AGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | ATTAAGAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGCGATGTTACGTGACATaGAAACGCGCTGGTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: IKSPVKWRELGVRQDLLQRCYVT*KRAGFH Trigger: ATGAAAACCAGCGCGTTTCCATGTCACGTAACATCG...CTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | ATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGACAGAGCAGCCTTGGTaGTTCCTCCGGACGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: IHCEYFLFPSVQVLLRVLTEQPW*FLRTTR Trigger: CCTGGTCGTCCGGAGGAAGCACCAAGGCTGCTCTGT...CAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR GCA 90 bp | CACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCGGGGATTTTCCGAGCTaGCGCCTCACTCAGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HIHCEYFLFPSVQVLLRVGDFPS*RLTQKG Trigger: GCCTTTCTGAGTGAGGCGGCAGCTCGGAAAATCCCC...GACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | TACATACACACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATCTTCATACTACCTCCTaGCACAGGCGGGCAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: YIHTYIVNIFCFHPCRSYLHTTS*HRRATL Trigger: GAGAGTTGCCCGCCTGTGCCAGGAGGTAGTATGAAG...ATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTGTGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | CACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCGTCATGTTGCGCTGGTaGCTTACTTTGTGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HIHCEYFLFPSVQVLLRVVMLRW*LTLCRK Trigger: CTTCCTGCACAAAGTAAGCCACCAGCGCAACATGAC...GACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | CACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCACTGTCATGTTGCGCTaGTGGCTTACTTTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HIHCEYFLFPSVQVLLRVTVMLR*WLTLCR Trigger: CCTGCACAAAGTAAGCCACCAGCGCAACATGACAGT...GACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CCA 90 bp | TACATACACACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTGGGAACGGAATTCATaGAGATGTCTTCCTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: YIHTYIVNIFCFHPCRSYWERNS*RCLPFL Trigger: AAGGAAAGGAAGACATCTCCATGAATTCCGTTCCCA...ATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTGTGTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | CCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAGCACTGGGTCCGAGGGGTACCGGTaGGGGTCCCAAGTGACAGTG | + |
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Preference number: 5 (lower is better) Translates to: PVKWRELGVRQDLLQSTGSEGYR*GSQVTV Trigger: CACTGTCACTTGGGACCCCAACCGGTACCCCTCGGA...CCCAGTGCTCTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS CCA 90 bp | GAGCACTGGGTAAGGAGTGGCATTTCTACAGCTTCTTCAGCTGAGTaGATATGCACCTCTTACTGCACATGGTGGATGACAGGGGTGACG | + |
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Preference number: 5 (lower is better) Translates to: EHWVRSGISTASSAE*ICTSYCTWWMTGVT Trigger: CGTCACCCCTGTCATCCACCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGTAGAAATGCCACTCCTTACCCAGTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS TCA 90 bp | GACAGTGTAATTCCAGGGGGAGGTGGAGCGGCTCTCGATGTTACGTaGCATGGAAACGCGCTGGTTTTCATTGATGATGCCAATGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: DSVIPGGGGAALDVT*HGNALVFIDDANVK Trigger: CTTGACATTGGCATCATCAATGAAAACCAGCGCGTTTCCATGTCACGTAACATCGAGAGCCGCTCCACCTCCCCCTGGAATTACACTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS TCA 90 bp | GGATGGGAACGGAATTCATGGAGATGTCTTCCTTTCCTTGAGCATTaGTGCAGCCCAAGTTCCTACACTGGGCCTGTACAACTTCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: GWERNSWRCLPFLEH*CSPSSYTGPVQLPR Trigger: CCTCGGAAGTTGTACAGGCCCAGTGTAGGAACTTGGGCTGCATCAATGCTCAAGGAAAGGAAGACATCTCCATGAATTCCGTTCCCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS TCA 90 bp | TGCAGAGCACTGGGTAAGGAGTGGCATTTCTACAGCTTCTTCAGCTaGGTGGATATGCACCTCTTACTGCACATGGTGGATGACAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: CRALGKEWHFYSFFS*VDMHLLLHMVDDRG Trigger: ACCCCTGTCATCCACCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGTAGAAATGCCACTCCTTACCCAGTGCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 90 bp | GGGGAGGTGGAGCGGCTCTCGATGTTACGTGACATGGAAACGCGCTaGTTTTCATTGATGATGCCAATGTCAAGCTTCATACTACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GEVERLSMLRDMETR*FSLMMPMSSFILPP Trigger: AGGAGGTAGTATGAAGCTTGACATTGGCATCATCAATGAAAACCAGCGCGTTTCCATGTCACGTAACATCGAGAGCCGCTCCACCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 90 bp | CTGCAATCAGTTAGAGACTCGCCTCACCTACTAGCAAGAGATGCATaGTCTGGCGGAACTCAGCATTCCTGTCCTTTTATGGGATCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LQSVRDSPHLLARDA*SGGTQHSCPFMGSG Trigger: CCCTGATCCCATAAAAGGACAGGAATGCTGAGTTCCGCCAGACCATGCATCTCTTGCTAGTAGGTGAGGCGAGTCTCTAACTGATTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478427.1 |
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| CDS-3UTR CAA 90 bp | ATTAAGAGTCCTGTGAAGTGGAGGGAATTGGGGGTCAGACAGGACTTGTTGCAGAAAGTATGTCCTACTTaGGGGATTTTCCGAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: IKSPVKWRELGVRQDLLQKVCPT*GIFRAA Trigger: GGCAGCTCGGAAAATCCCCAAAGTAGGACATACTTT...CTGCAACAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCACAGGACTCTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | ATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGTGAAGTGGAGGGTGAAGTGGAGGGAATaGGGGGTCAGACAGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: IFSVSIRAGLIKSPVKWRVKWRE*GVRQDL Trigger: CAAGTCCTGTCTGACCCCCAATTCCCTCCACTTCAC...CCTCCACTTCACAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | TACATACACACATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATGACAGCAGCAAGTACTaGACCATGGCTGGGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: YIHTYIVNIFCFHPCRSYDSSKY*TMAGPC Trigger: GCATGGCCCAGCCATGGTCAAGTACTTGCTGCTGTC...ATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTATGTGTGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | ATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGTGAAGTGGAGGGATGTCTTCCTTTCCTaGAGCATTGATGCAGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: IFSVSIRAGLIKSPVKWRDVFLS*SIDAAQ Trigger: TTGGGCTGCATCAATGCTCAAGGAAAGGAAGACATC...CCTCCACTTCACAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | ATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGGACGACCAGGGTCTCTaGCTGGATGGGAACGGAATT | + |
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Preference number: 5 (lower is better) Translates to: IHCEYFLFPSVQVLLRVLDDQGL*LDGNGI Trigger: AATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGTC...CAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | ATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGCGCTGGTGGCTTACTTaGTGCAGGAAGCTCTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: IHCEYFLFPSVQVLLRVLRWWLT*CRKLFL Trigger: CAGAAAGAGCTTCCTGCACAAAGTAAGCCACCAGCG...CAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS-3UTR CAA 90 bp | ATACATTGTGAATATTTTCTGTTTCCATCCGTGCAGGTCTTATTAAGAGTCCTGGTCTTCACTGTCATGTaGCGCTGGTGGCTTACTTTG | + |
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Preference number: 5 (lower is better) Translates to: IHCEYFLFPSVQVLLRVLVFTVM*RWWLTL Trigger: CAAAGTAAGCCACCAGCGCAACATGACAGTGAAGAC...CAGGACTCTTAATAAGACCTGCACGGATGGAAACAGAAAATATTCACAATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS GCA 72 bp | CAGCCTTGGTGCTTCCTCCGGACGACCAGGGTCTCTTaGTGGATGGGAACGGAATTCATGGAGATGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QPWCFLRTTRVS*WMGTEFMEMSS Trigger: GGAAGACATCTCCATGAATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGTCCGGAGGAAGCACCAAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 72 bp | AGCACCTTCTCCAACTGGAAAGAAACAGAGCAGCCTTaGTGCTTCCTCCGGACGACCAGGGTCTCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: STFSNWKETEQP*CFLRTTRVSCW Trigger: CCAGCAAGAGACCCTGGTCGTCCGGAGGAAGCACCAAGGCTGCTCTGTTTCTTTCCAGTTGGAGAAGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CAA 72 bp | GCAGCCTTGGTGCTTCCTCCGGACGACCAGGGTCTCTaGCTGGATGGGAACGGAATTCATGGAGATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AALVLPPDDQGL*LDGNGIHGDVF Trigger: GAAGACATCTCCATGAATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGTCCGGAGGAAGCACCAAGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS TCA 72 bp | ATTCCAGGGGGAGGTGGAGCGGCTCTCGATGTTACGTaGCATGGAAACGCGCTGGTTTTCATTGATGATGCC | + |
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Preference number: 6 (lower is better) Translates to: IPGGGGAALDVT*HGNALVFIDDA Trigger: GGCATCATCAATGAAAACCAGCGCGTTTCCATGTCACGTAACATCGAGAGCCGCTCCACCTCCCCCTGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS GCA 72 bp | ACAGCTTCTTCAGCTGAGTGGATATGCACCTCTTACTaGACATGGTGGATGACAGGGGTGACGCAGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: TASSAEWICTSY*TWWMTGVTQVQ Trigger: CTGCACCTGCGTCACCCCTGTCATCCACCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 72 bp | CCTTGGTGCTTCCTCCGGACGACCAGGGTCTCTTGCTaGATGGGAACGGAATTCATGGAGATGTCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: PWCFLRTTRVSC*MGTEFMEMSSF Trigger: AAAGGAAGACATCTCCATGAATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGTCCGGAGGAAGCACCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CAA 72 bp | ACCATGGCTGGGCCATGCAGGGTCTTCACTGTCATGTaGCGCTGGTGGCTTACTTTGTGCAGGAAGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TMAGPCRVFTVM*RWWLTLCRKLF Trigger: AAAGAGCTTCCTGCACAAAGTAAGCCACCAGCGCAACATGACAGTGAAGACCCTGCATGGCCCAGCCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336123.5 |
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| CDS CAA 90 bp | AGAAACAGAGCAGCCTTGGTGCTTCCTCCGGACGACCAGGGTCTCTaGCTGGATGGGAACGGAATTCATGGAGATGTCTTCCTTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RNRAALVLPPDDQGL*LDGNGIHGDVFLSL Trigger: CAAGGAAAGGAAGACATCTCCATGAATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGTCCGGAGGAAGCACCAAGGCTGCTCTGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 72 bp | AGACTCGCCTCACCTACTAGCAAGAGATGCATGGTCTaGCGGAACTCAGCATTCCTGTCCTTTTATGGGATC | + |
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Preference number: 6 (lower is better) Translates to: RLASPTSKRCMV*RNSAFLSFYGI Trigger: GATCCCATAAAAGGACAGGAATGCTGAGTTCCGCCAGACCATGCATCTCTTGCTAGTAGGTGAGGCGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478427.1 |
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| CDS GCA 72 bp | AGTGGCATTTCTACAGCTTCTTCAGCTGAGTGGATATaGACCTCTTACTGCACATGGTGGATGACAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGISTASSAEWI*TSYCTWWMTGV Trigger: CACCCCTGTCATCCACCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGTAGAAATGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 72 bp | GTTAGAGACTCGCCTCACCTACTAGCAAGAGATGCATaGTCTGGCGGAACTCAGCATTCCTGTCCTTTTATG | + |
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Preference number: 6 (lower is better) Translates to: VRDSPHLLARDA*SGGTQHSCPFM Trigger: CATAAAAGGACAGGAATGCTGAGTTCCGCCAGACCATGCATCTCTTGCTAGTAGGTGAGGCGAGTCTCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478427.1 |
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| CDS TCA 72 bp | CGGAATTCATGGAGATGTCTTCCTTTCCTTGAGCATTaGTGCAGCCCAAGTTCCTACACTGGGCCTGTACAA | + |
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Preference number: 6 (lower is better) Translates to: RNSWRCLPFLEH*CSPSSYTGPVQ Trigger: TTGTACAGGCCCAGTGTAGGAACTTGGGCTGCATCAATGCTCAAGGAAAGGAAGACATCTCCATGAATTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS TCA 72 bp | CTGGGTAAGGAGTGGCATTTCTACAGCTTCTTCAGCTaGGTGGATATGCACCTCTTACTGCACATGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LGKEWHFYSFFS*VDMHLLLHMVD Trigger: ATCCACCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGTAGAAATGCCACTCCTTACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 72 bp | GAGCGGCTCTCGATGTTACGTGACATGGAAACGCGCTaGTTTTCATTGATGATGCCAATGTCAAGCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: ERLSMLRDMETR*FSLMMPMSSFI Trigger: TATGAAGCTTGACATTGGCATCATCAATGAAAACCAGCGCGTTTCCATGTCACGTAACATCGAGAGCCGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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| CDS CCA 72 bp | GTAAGGAGTGGCATTTCTACAGCTTCTTCAGCTGAGTaGATATGCACCTCTTACTGCACATGGTGGATGACA | + |
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Preference number: 6 (lower is better) Translates to: VRSGISTASSAE*ICTSYCTWWMT Trigger: TGTCATCCACCATGTGCAGTAAGAGGTGCATATCCACTCAGCTGAAGAAGCTGTAGAAATGCCACTCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336123.5 ENST00000478427.1 |
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