Pregenerated sensors for IL17C (Homo sapiens)
Ensembl gene IDs: ENSG00000124391Ensembl transcript IDs: ENST00000244241.5, ENST00000569133.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGCCTGCGGGGGCCTGAGGCCAGTGATAGGGTAAGGGAAGCCGGGAGCAGGACACACATAAATAGGGGGTaGCCTCTGGGGAGCACACGT | + |
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Preference number: 2 (lower is better) Translates to: SLRGPEASDRVREAGSRTHINRG*PLGSTR Trigger: ACGTGTGCTCCCCAGAGGGCACCCCCTATTTATGTG...TGTCCTGCTCCCGGCTTCCCTTACCCTATCACTGGCCTCAGGCCCCCGCAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTAGGCTGGAAGAGGTGCTaGGCTCCTTCTACCCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QDREPRYRQPCDTFSAALGWKRC*APSTPN Trigger: GTTGGGGGTAGAAGGAGCTCAGCACCTCTTCCAGCC...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAATAGGGGGTGCCCTCTaGGGAGCACACGTGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: EEVLSSFYPQLLRLEMRRIGGAL*GAHVSS Trigger: ACTGGACACGTGTGCTCCCCAGAGGGCACCCCCTAT...TCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGCTCTCCAGACACGGGGAATaGCCAGACCCCAAGGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: QPCDTFSAALRAGRGAELSRHGE*PDPKGS Trigger: ACTACCCTTGGGGTCTGGGCATTCCCCGTGTCTGGA...GAGCTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| 3UTR TCA 72 bp | GGAGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTaGCACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GAGQGAKVQAAV*HLFCSFKGWKR Trigger: CCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGCGGGGGCCTGAGGCCAGTGATAGGGTAAGGGAAGCCGGGAGCAGGACAGGAGGAGCGTCATGGTaGCGGCAGCGGGGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLRGPEASDRVREAGSRTGGASW*RQRGRL Trigger: CAGCCTGCCCCGCTGCCGCCACCATGACGCTCCTCC...TGTCCTGCTCCCGGCTTCCCTTACCCTATCACTGGCCTCAGGCCCCCGCAGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR TCA 90 bp | AGCCTGCGGGGGCCTGAGGCCAGTGATAGGGTAAGGGAAGCCGGGAGCAGGACAGCACTGGGTCGTAGCTaGGGGCCTCTCGTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLRGPEASDRVREAGSRTALGRS*GPLVPP Trigger: GGGAGGCACGAGAGGCCCTCAGCTACGACCCAGTGC...TGTCCTGCTCCCGGCTTCCCTTACCCTATCACTGGCCTCAGGCCCCCGCAGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGCGGGGGCCTGAGGCCAGTGATAGGGTAAGGGAAGCCGGGAGCAGGACAAGCCGAGTAGCAGTGTaGGGTACCGTGACTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLRGPEASDRVREAGSRTSRVAV*GTVTVG Trigger: CCCCACAGTCACGGTACCCCACACTGCTACTCGGCT...TGTCCTGCTCCCGGCTTCCCTTACCCTATCACTGGCCTCAGGCCCCCGCAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGCGGGGGCCTGAGGCCAGTGATAGGGTAAGGGAAGCCGGGAGCAGGACAGGTGAGATGGAGCGCTaGTGGGTGTCTGCCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SLRGPEASDRVREAGSRTGEMER*WVSASN Trigger: GTTGGAGGCAGACACCCACCAGCGCTCCATCTCACC...TGTCCTGCTCCCGGCTTCCCTTACCCTATCACTGGCCTCAGGCCCCCGCAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTGGGGCAGCACGCAGGTaGAGCCGACGGGGACGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SRTGSQGTGSRVTPFLQLGAARR*SRRGRG Trigger: TCCACGTCCCCGTCGGCTGCACCTGCGTGCTGCCCC...AAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAACCGGGGAGGAGCGTCATaGTGGCGGCAGCGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGAELLLPPTTEAGDEENRGGAS*WRQRGR Trigger: CCTGCCCCGCTGCCGCCACCATGACGCTCCTCCCCG...GTTCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | GAAACAGGGGTACTTCCAAGGAGGTTGGGAAGAGGCAGCCTGCGGGGGCCTGAGAGGGAGGGGTCATGGTaGGCCAGGCATGTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ETGVLPRRLGRGSLRGPEREGSW*ARHVCS Trigger: GCTGCACACATGCCTGGCCCACCATGACCCCTCCCT...CTCAGGCCCCCGCAGGCTGCCTCTTCCCAACCTCCTTGGAAGTACCCCTGTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGTCGTGCCTCCCCCTGTaGCTTGCTGCCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSRTGSQGTGSRVTPFLQSCLPL*LAASRL Trigger: CAGCCTGGAGGCAGCAAGCCACAGGGGGAGGCACGA...CTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR TCA 90 bp | AGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAACGCAGCCGCACGGAGTTaGGCGCAGCTGTCTCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RGAELLLPPTTEAGDEENAAARS*AQLSRG Trigger: GCCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGC...GTTCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTACCTCGGCGGTCACACTaGACGGGGCAGCACGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QDREPRYRQPCDTFSAALPRRSH*TGQHAG Trigger: ACCTGCGTGCTGCCCCGTTCAGTGTGACCGCCGAGG...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | AGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAACGGGCTTGGAGCGGCCTaGACACCTGGCGGCAATCCC | + |
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Preference number: 4 (lower is better) Translates to: RGAELLLPPTTEAGDEENGLGAA*TPGGNP Trigger: GGGATTGCCGCCAGGTGTGCAGGCCGCTCCAAGCCC...GTTCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | GAAACAGGGGTACTTCCAAGGAGGTTGGGAAGAGGCAGCCTGCGGGGGCCTGAGCATCGATACAGCCTCTaGACAGGCACTCGGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ETGVLPRRLGRGSLRGPEHRYSL*TGTRRR Trigger: CCTTCGCCGAGTGCCTGTGCAGAGGCTGTATCGATG...CTCAGGCCCCCGCAGGCTGCCTCTTCCCAACCTCCTTGGAAGTACCCCTGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | GAAACAGGGGTACTTCCAAGGAGGTTGGGAAGAGGCAGCCTGCGGGGGCCTGAGTCCAGACACGGGGAATaGCCAGACCCCAAGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ETGVLPRRLGRGSLRGPESRHGE*PDPKGS Trigger: ACTACCCTTGGGGTCTGGGCATTCCCCGTGTCTGGA...CTCAGGCCCCCGCAGGCTGCCTCTTCCCAACCTCCTTGGAAGTACCCCTGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTACGCAGCACCGGGCACTaGGTCGTAGCTGAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QDREPRYRQPCDTFSAALRSTGH*VVAEGL Trigger: GAGGCCCTCAGCTACGACCCAGTGCCCGGTGCTGCG...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCAGCCGACGGGGACGTaGATGAACTCGGTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSRTGSQGTGSRVTPFLQQPTGT*MNSVWK Trigger: CTTCCACACCGAGTTCATCCACGTCCCCGTCGGCTG...CTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGATAGGGGGTGCCCTCTaGGGAGCACACGTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSRTGSQGTGSRVTPFLQIGGAL*GAHVSS Trigger: ACTGGACACGTGTGCTCCCCAGAGGGCACCCCCTAT...CTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | AGGCAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGCCCCCTGTGGCTTGCTaGCTCCAGGCTGGACACCAG | + |
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Preference number: 4 (lower is better) Translates to: RQPCDTFSAALRAGRGAEPPVAC*LQAGHQ Trigger: CTGGTGTCCAGCCTGGAGGCAGCAAGCCACAGGGGG...CTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAAGCGGCCTGCACACCTaGCGGCAATCCCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: EEVLSSFYPQLLRLEMRRSGLHT*RQSHRC Trigger: GCACCTGTGGGATTGCCGCCAGGTGTGCAGGCCGCT...TCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | CAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGCTCCTCGCGGCCCGTCCGTaGATCGATACAGCCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QPCDTFSAALRAGRGAELLAARP*IDTASA Trigger: TGCAGAGGCTGTATCGATGCACGGACGGGCCGCGAG...GAGCTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAACCTGAGGGAGGGGTCATaGTGGGCCAGGCATGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RGAELLLPPTTEAGDEENLREGS*WARHVC Trigger: GCACACATGCCTGGCCCACCATGACCCCTCCCTCAG...GTTCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAACAAGCCTGCCCCCACTTaGCACCTCGAGCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RGAELLLPPTTEAGDEENKPAPT*HLEPAG Trigger: ACCTGCTGGCTCGAGGTGCCAAGTGGGGGCAGGCTT...GTTCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTAAGCACCAGCAGGCTCTaGAGCAGCCGCACGGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QDREPRYRQPCDTFSAALSTSRL*SSRTEL Trigger: CAACTCCGTGCGGCTGCTCCAGAGCCTGCTGGTGCT...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR TCA 90 bp | CAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGCTCACGGTATCTCCAGGGTaGGATGGAGCGCTGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: QPCDTFSAALRAGRGAELTVSPG*DGALVG Trigger: ACCCACCAGCGCTCCATCTCACCCTGGAGATACCGT...GAGCTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR TCA 90 bp | CAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGCTCCGACGGGGACGTGGATaGACTCGGTGTGGAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: QPCDTFSAALRAGRGAELRRGRG*TRCGRQ Trigger: TTGCCTTCCACACCGAGTTCATCCACGTCCCCGTCG...GAGCTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | AGGCAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGGCTACAGGCAAAGCCTaGCCCCACTTGGCACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RQPCDTFSAALRAGRGAEATGKA*PHLAPR Trigger: TCGAGGTGCCAAGTGGGGGCAGGCTTTGCCTGTAGC...CTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGAGCTCCTTCTACCCCCAACTACTGAGGCTGGAGATGAGGAGAACGAGATGGAGCGCTGGTaGGTGTCTGCCTCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: RGAELLLPPTTEAGDEENEMERW*VSASNT Trigger: GGTGTTGGAGGCAGACACCCACCAGCGCTCCATCTC...GTTCTCCTCATCTCCAGCCTCAGTAGTTGGGGGTAGAAGGAGCTCAGCACCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTACTTCCAAGGAGGTTaGGAAGAGGCAGCCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SRTGSQGTGSRVTPFLQLYFQGG*EEAACG Trigger: CCCGCAGGCTGCCTCTTCCCAACCTCCTTGGAAGTA...AAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTACACATAAATAGGGGGTaGCCTCTGGGGAGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: QDREPRYRQPCDTFSAALHINRG*PLGSTR Trigger: ACGTGTGCTCCCCAGAGGGCACCCCCTATTTATGTG...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | AGGCAGCCGTGTGACACCTTTTCTGCAGCTTTAAGGGCTGGAAGAGGTGCTGAGGAAGGCCAGCTTCTGTaGATAGCGGTCCTCATCCGT | + |
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Preference number: 4 (lower is better) Translates to: RQPCDTFSAALRAGRGAEEGQLL*IAVLIR Trigger: ACGGATGAGGACCGCTATCCACAGAAGCTGGCCTTC...CTCAGCACCTCTTCCAGCCCTTAAAGCTGCAGAAAAGGTGTCACACGGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTATGGATGAACTCGGTGTaGAAGGCAAAGGCCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QDREPRYRQPCDTFSAALWMNSV*KAKAPG Trigger: ACCTGGGGCCTTTGCCTTCCACACCGAGTTCATCCA...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGCTTTAGTACAGGCAGCCGTGTaGCACCTTTTCTGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: QDREPRYRQPCDTFSAALVQAAV*HLFCSF Trigger: AAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTAC...TAAAGCTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS TCA 90 bp | GCCGGCGGCGCAGCACCAGCAGGCTCTGGAGCAGCCGCACGGAGTTaGGCGCAGCTGTCTCGCGGCCCGTCCGTGCATCGATACAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: AGGAAPAGSGAAARS*AQLSRGPSVHRYSL Trigger: GAGGCTGTATCGATGCACGGACGGGCCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGCTCCAGAGCCTGCTGGTGCTGCGCCGCCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS TCA 90 bp | CTCCAACACCTCCTCCGGCCGCAGCACCGGGCACTGGGTCGTAGCTaGGGGCCTCTCGTGCCTCCCCCTGTGGCTTGCTGCCTCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LQHLLRPQHRALGRS*GPLVPPPVACCLQA Trigger: AGCCTGGAGGCAGCAAGCCACAGGGGGAGGCACGAGAGGCCCTCAGCTACGACCCAGTGCCCGGTGCTGCGGCCGGAGGAGGTGTTGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CCA 90 bp | CCAAGCAGCATCCATCCGAGCGGCATGTGGAGAGGCTCACCGTCATaGTGGCGGCAGCGGGGCAGGCTGGGCTTGGAGCGGCCTGCACAC | + |
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Preference number: 5 (lower is better) Translates to: PSSIHPSGMWRGSPS*WRQRGRLGLERPAH Trigger: GTGTGCAGGCCGCTCCAAGCCCAGCCTGCCCCGCTGCCGCCACCATGACGGTGAGCCTCTCCACATGCCGCTCGGATGGATGCTGCTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569133.1 |
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| CDS GCA 90 bp | GAGCAGCCGCACGGAGTTGAGCGCAGCTGTCTCGCGGCCCGTCCGTaGATCGATACAGCCTCTGCACAGGCACTCGGCGAAGGCCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: EQPHGVERSCLAARP*IDTASAQALGEGQL Trigger: AAGCTGGCCTTCGCCGAGTGCCTGTGCAGAGGCTGTATCGATGCACGGACGGGCCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CCA 90 bp | TCATCCGTGTCCACACGGTATCTCCAGGGTGAGATGGAGCGCTGGTaGGTGTCTGCCTCCAACACCTCCTCCGGCCGCAGCACCGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: SSVSTRYLQGEMERW*VSASNTSSGRSTGH Trigger: GTGCCCGGTGCTGCGGCCGGAGGAGGTGTTGGAGGCAGACACCCACCAGCGCTCCATCTCACCCTGGAGATACCGTGTGGACACGGATGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CCA 90 bp | TCCTCATCCGTGTCCACACGGTATCTCCAGGGTGAGATGGAGCGCTaGTGGGTGTCTGCCTCCAACACCTCCTCCGGCCGCAGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: SSSVSTRYLQGEMER*WVSASNTSSGRSTG Trigger: CCCGGTGCTGCGGCCGGAGGAGGTGTTGGAGGCAGACACCCACCAGCGCTCCATCTCACCCTGGAGATACCGTGTGGACACGGATGAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS GCA 90 bp | GGCCGGGGAGGAGCTGGTGAAACAGGCAGGTGGGTGGTTAGGAGGTaGCCAGGGCAGGGGGCACCTCACTTCCACCTCAGCTTTCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GRGGAGETGRWVVRR*PGQGAPHFHLSFPC Trigger: ACAAGGAAAGCTGAGGTGGAAGTGAGGTGCCCCCTGCCCTGGGCACCTCCTAACCACCCACCTGCCTGTTTCACCAGCTCCTCCCCGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569133.1 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGAGCAGCCGCACGGAGTaGAGCGCAGCTGTCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: GSRTGSQGTGSRVTPFLQSSRTE*SAAVSR Trigger: CCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGCT...CTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS GCA 90 bp | ACCCTCCTCCCAGGCTCAGAGAACCCCAGCCCTTCCATGCCAGGCTaGACATCCAAGCAGCATCCATCCGAGCGGCATGTGGAGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TLLPGSENPSPSMPG*TSKQHPSERHVERL Trigger: GAGCCTCTCCACATGCCGCTCGGATGGATGCTGCTTGGATGTGCAGCCTGGCATGGAAGGGCTGGGGTTCTCTGAGCCTGGGAGGAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569133.1 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGGACAGGGAGCCAAGGTACAGGCAGCCGTGTGACACCTTTTCTGCAGGTACTTCCAAGGAGGTaGGGAAGAGGCAGCCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: GSRTGSQGTGSRVTPFLQVLPRR*GRGSLR Trigger: CCGCAGGCTGCCTCTTCCCAACCTCCTTGGAAGTAC...CTGCAGAAAAGGTGTCACACGGCTGCCTGTACCTTGGCTCCCTGTCCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244241.5 |
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| CDS CCA 72 bp | GCCTCCAACACCTCCTCCGGCCGCAGCACCGGGCACTaGGTCGTAGCTGAGGGCCTCTCGTGCCTCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASNTSSGRSTGH*VVAEGLSCLPL Trigger: CAGGGGGAGGCACGAGAGGCCCTCAGCTACGACCCAGTGCCCGGTGCTGCGGCCGGAGGAGGTGTTGGAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CAA 90 bp | GGCCGGCGGCGCAGCACCAGCAGGCTCTGGAGCAGCCGCACGGAGTaGAGCGCAGCTGTCTCGCGGCCCGTCCGTGCATCGATACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRRRSTSRLWSSRTE*SAAVSRPVRASIQP Trigger: AGGCTGTATCGATGCACGGACGGGCCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGCTCCAGAGCCTGCTGGTGCTGCGCCGCCGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CAA 72 bp | CGCAGCACCAGCAGGCTCTGGAGCAGCCGCACGGAGTaGAGCGCAGCTGTCTCGCGGCCCGTCCGTGCATCG | + |
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Preference number: 6 (lower is better) Translates to: RSTSRLWSSRTE*SAAVSRPVRAS Trigger: CGATGCACGGACGGGCCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGCTCCAGAGCCTGCTGGTGCTGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS TCA 72 bp | GCAGCACCAGCAGGCTCTGGAGCAGCCGCACGGAGTTaGGCGCAGCTGTCTCGCGGCCCGTCCGTGCATCGA | + |
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Preference number: 6 (lower is better) Translates to: AAPAGSGAAARS*AQLSRGPSVHR Trigger: TCGATGCACGGACGGGCCGCGAGACAGCTGCGCTCAACTCCGTGCGGCTGCTCCAGAGCCTGCTGGTGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CCA 72 bp | GCTGCACATCCAAGCAGCATCCATCCGAGCGGCATGTaGAGAGGCTCACCGTCATGGTGGCGGCAGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAHPSSIHPSGM*RGSPSWWRQRG Trigger: GCCCCGCTGCCGCCACCATGACGGTGAGCCTCTCCACATGCCGCTCGGATGGATGCTGCTTGGATGTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569133.1 |
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| CDS GCA 72 bp | CACGGAGTTGAGCGCAGCTGTCTCGCGGCCCGTCCGTaGATCGATACAGCCTCTGCACAGGCACTCGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: HGVERSCLAARP*IDTASAQALGE Trigger: TTCGCCGAGTGCCTGTGCAGAGGCTGTATCGATGCACGGACGGGCCGCGAGACAGCTGCGCTCAACTCCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CCA 72 bp | TCCACACGGTATCTCCAGGGTGAGATGGAGCGCTGGTaGGTGTCTGCCTCCAACACCTCCTCCGGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STRYLQGEMERW*VSASNTSSGRS Trigger: GCTGCGGCCGGAGGAGGTGTTGGAGGCAGACACCCACCAGCGCTCCATCTCACCCTGGAGATACCGTGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS CCA 72 bp | GTGTCCACACGGTATCTCCAGGGTGAGATGGAGCGCTaGTGGGTGTCTGCCTCCAACACCTCCTCCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: VSTRYLQGEMER*WVSASNTSSGR Trigger: GCGGCCGGAGGAGGTGTTGGAGGCAGACACCCACCAGCGCTCCATCTCACCCTGGAGATACCGTGTGGACAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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| CDS GCA 72 bp | CTGTCTCGCGGCCCGTCCGTGCATCGATACAGCCTCTaGACAGGCACTCGGCGAAGGCCAGCTTCTGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LSRGPSVHRYSL*TGTRRRPASVD Trigger: ATCCACAGAAGCTGGCCTTCGCCGAGTGCCTGTGCAGAGGCTGTATCGATGCACGGACGGGCCGCGAGACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244241.5 ENST00000569133.1 |
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