Pregenerated sensors for IL17A (Homo sapiens)
Ensembl gene IDs: ENSG00000112115Ensembl transcript IDs: ENST00000648244.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTCGTTCTGCCCCATCAGCTCCTTTCTGGGTTGTGTGGTGCCTTaGTCAGACAGAAGCCAGGCCCTAGGAGTGTTGCTTGAGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSFCPISSFLGCVVP*SDRSQALGVLLEEE Trigger: CTCTTCCTCAAGCAACACTCCTAGGGCCTGGCTTCTGTCTGATCAAGGCACCACACAACCCAGAAAGGAGCTGATGGGGCAGAACGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR CCA 90 bp | CCTTCCTTCTTGGAAAGAGGGAAAGGTAATTCAGATCTCATATCTTaGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCTTA | + |
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Preference number: 1 (lower is better) Translates to: PSFLERGKGNSDLIS*PSVTSEALIGQTAL Trigger: TAAGGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACCTTTCCCTCTTTCCAAGAAGGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR TCA 90 bp | ACAGCATTGGCTAATAGTATGAAAACCTTAGTCGGTGTTCAGTCTTaGAGGCATGTGAAATCGAGAACTTGGAATTTTGGGTATTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: TALANSMKTLVGVQS*RHVKSRTWNFGYFQ Trigger: CTGGAAATACCCAAAATTCCAAGTTCTCGATTTCACATGCCTTCAAGACTGAACACCGACTAAGGTTTTCATACTATTAGCCAATGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR CCA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTaGAAAGAGGGAAAGGTAATTCAGATCTCATATCTTGGCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: KVNKKQIGTQSNLPS*KEGKVIQISYLGQV Trigger: CACTTGGCCAAGATATGAGATCTGAATTACCTTTCCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR CAA 90 bp | TTCTCATACTTAAAGTTCGTTCTGCCCCATCAGCTCCTTTCTGGGTaGTGTGGTGCCTTGATCAGACAGAAGCCAGGCCCTAGGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: FSYLKFVLPHQLLSG*CGALIRQKPGPRSV Trigger: AACACTCCTAGGGCCTGGCTTCTGTCTGATCAAGGCACCACACAACCCAGAAAGGAGCTGATGGGGCAGAACGAACTTTAAGTATGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR-3UTR TCA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTAAGGATGAGGGTTCCTaGGGGGCTGGGTCGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLKDEGS*GAGSAL Trigger: GAGAGCCGACCCAGCCCCTCAGGAACCCTCATCCTT...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR-3UTR CCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTCAGATCTCATATCTTaGCCAAGTGTTACCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SKQEANWYSVKPSFLERGSDLIS*PSVTSE Trigger: TTCAGAGGTAACACTTGGCCAAGATATGAGATCTGA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR TCA 72 bp | TGCCCCATCAGCTCCTTTCTGGGTTGTGTGGTGCCTTaGTCAGACAGAAGCCAGGCCCTAGGAGTGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: CPISSFLGCVVP*SDRSQALGVLL Trigger: AAGCAACACTCCTAGGGCCTGGCTTCTGTCTGATCAAGGCACCACACAACCCAGAAAGGAGCTGATGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR TCA 72 bp | TCCGAAATGAGGCTGTCTTTGAAGGATGAGGGTTCCTaGGGGGCTGGGTCGGCTCTCCATAGTCTAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SEMRLSLKDEGS*GAGSALHSLTA Trigger: AGCAGTTAGACTATGGAGAGCCGACCCAGCCCCTCAGGAACCCTCATCCTTCAAAGACAGCCTCATTTCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR-3UTR CAA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGCATAGTCTAACTGCTTaGGGGAGTGTGGGCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEHSLTA*GSVGSP Trigger: TGGGGAGCCCACACTCCCCAAAGCAGTTAGACTATG...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR TCA 72 bp | GCTAATAGTATGAAAACCTTAGTCGGTGTTCAGTCTTaGAGGCATGTGAAATCGAGAACTTGGAATTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: ANSMKTLVGVQS*RHVKSRTWNFG Trigger: CCCAAAATTCCAAGTTCTCGATTTCACATGCCTTCAAGACTGAACACCGACTAAGGTTTTCATACTATTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR CCA 72 bp | GTCTTGAAGGCATGTGAAATCGAGAACTTGGAATTTTaGGTATTTCCAGGTCATTGTTACTCAAAGACATGC | + |
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Preference number: 3 (lower is better) Translates to: VLKACEIENLEF*VFPGHCYSKTC Trigger: GCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTCCAAGTTCTCGATTTCACATGCCTTCAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR CCA 72 bp | TTGGAAAGAGGGAAAGGTAATTCAGATCTCATATCTTaGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAA | + |
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Preference number: 3 (lower is better) Translates to: LERGKGNSDLIS*PSVTSEALIGQ Trigger: TTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACCTTTCCCTCTTTCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCGGTGGACAATCGGGGTaGCACAGGTGCAGCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: DLISWPSVTSEALIGQTAGGQSG*HRCSPR Trigger: CCGTGGGCTGCACCTGTGTCACCCCGATTGTCCACC...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCCAAGTGGCGGCACTTTaGCTCCCAGATCACAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: DLISWPSVTSEALIGQTAQVAAL*LPDHRG Trigger: CCCTCTGTGATCTGGGAGGCAAAGTGCCGCCACTTG...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCAGTGTGGAGGCTCCCTaGGCAGGACCAGGATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: DLISWPSVTSEALIGQTASVEAP*AGPGSL Trigger: AAGAGATCCTGGTCCTGCGCAGGGAGCCTCCACACT...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGGGTTGTGTGGTGCCTTaGTCAGACAGAAGCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SKQEANWYSVKPSFLERGGCVVP*SDRSQA Trigger: GGCCTGGCTTCTGTCTGATCAAGGCACCACACAACC...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTGGAGTTGGGGCAGTGTaGAGGCTCCCTGCGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLGVGAV*RLPAQD Trigger: GTCCTGCGCAGGGAGCCTCCACACTGCCCCAACTCC...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | TTTAATAATGACATGCCATTCCTCAGGGCCATTATCTTATTTGCTCTATTCCTACGTTCCCATCAGCGTTaGTGCAGCCCAAGTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: FNNDMPFLRAIILFALFLRSHQR*CSPSGG Trigger: GCCGCCACTTGGGCTGCATCAACGCTGATGGGAACG...TAGGAATAGAGCAAATAAGATAATGGCCCTGAGGAATGGCATGTCATTATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | TTTAATAATGACATGCCATTCCTCAGGGCCATTATCTTATTTGCTCTATTCCTAAAGGATGAGGGTTCCTaGGGGGCTGGGTCGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FNNDMPFLRAIILFALFLKDEGS*GAGSAL Trigger: GAGAGCCGACCCAGCCCCTCAGGAACCCTCATCCTT...TAGGAATAGAGCAAATAAGATAATGGCCCTGAGGAATGGCATGTCATTATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTGGGATTGTGATTCCTaGCTTCACTATGGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKQEANWYSVKPSFLERGWDCDS*LHYGLQ Trigger: CTGGAGGCCATAGTGAAGGCAGGAATCACAATCCCA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGATCTCAGGGTCCTCATTaGGGTGGAGATTCCAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGSQGPH*GGDSKV Trigger: CACCTTGGAATCTCCACCGCAATGAGGACCCTGAGA...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCCCTTTCTGGGTTGTGTaGTGCCTTGATCAGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: DLISWPSVTSEALIGQTAPFWVV*CLDQTE Trigger: TTCTGTCTGATCAAGGCACCACACAACCCAGAAAGG...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAGTGGAGATTCCAAGGTaGGGTGGATCGGTTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGVEIPR*GGSVVV Trigger: TACTACAACCGATCCACCTCACCTTGGAATCTCCAC...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGCTGGACATTGTAGTCTaGAGACAATGTCTCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SKQEANWYSVKPSFLERGLDIVV*RQCLLP Trigger: TGGGAGGAGACATTGTCTTCAGACTACAATGTCCAG...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTGGTCTGTTGATCTCTaGGGGGCCTTAATCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SKQEANWYSVKPSFLERGWSVDL*GALISK Trigger: TTTGGAGATTAAGGCCCCTCAGAGATCAACAGACCA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | TTTAATAATGACATGCCATTCCTCAGGGCCATTATCTTATTTGCTCTATTCCTAGGGTCCTCATTGCGGTaGAGATTCCAAGGTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: FNNDMPFLRAIILFALFLGSSLR*RFQGEV Trigger: CACCTCACCTTGGAATCTCCACCGCAATGAGGACCC...TAGGAATAGAGCAAATAAGATAATGGCCCTGAGGAATGGCATGTCATTATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACCATCAGCTCCTTTCTaGGTTGTGTGGTGCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGPSAPF*VVWCLD Trigger: ATCAAGGCACCACACAACCCAGAAAGGAGCTGATGG...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTTATGGATGTTCAGGTTaGCCATCACAGTCCGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLYGCSG*PSQSGG Trigger: TCCCCCGGACTGTGATGGTCAACCTGAACATCCATA...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACTTGTCCTCAGAATTTaGGCATCCTGGATTTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGLVLRI*ASWISW Trigger: CCACGAAATCCAGGATGCCCAAATTCTGAGGACAAG...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATTCAACTGGGGATGGATaGGTTTGTGCCTGCTATGAG | + |
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Preference number: 4 (lower is better) Translates to: EALIGQTALRTLMSLVRNSTGDG*VCACYE Trigger: CTCATAGCAGGCACAAACTCATCCATCCCCAGTTGA...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCAGTCTTGAAGGCATGTaGAATCGAGAACTTGGAATT | + |
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Preference number: 4 (lower is better) Translates to: DLISWPSVTSEALIGQTASLEGM*NRELGI Trigger: AATTCCAAGTTCTCGATTTCACATGCCTTCAAGACT...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGTCGGTGTTCAGTCTTaGAGGCATGTGAAATCGAGA | + |
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Preference number: 4 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEVGVQS*RHVKSR Trigger: TCTCGATTTCACATGCCTTCAAGACTGAACACCGAC...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTTTCTGGGTTGTGTGGTaGCTTGATCAGACAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLFWVVW*LDQTEA Trigger: GGCTTCTGTCTGATCAAGGCACCACACAACCCAGAA...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTTTCTTCCAATCAACTaGGGATGGATGAGTTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SKQEANWYSVKPSFLERGFLPIN*GWMSLC Trigger: GCACAAACTCATCCATCCCCAGTTGATTGGAAGAAA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGCATCCTGGATTTCGTaGGATTGTGATTCCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEASWIS*DCDSCL Trigger: AAGGCAGGAATCACAATCCCACGAAATCCAGGATGC...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTTGGTATTCCGGTTATaGATGTTCAGGTTGACCATC | + |
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Preference number: 4 (lower is better) Translates to: SKQEANWYSVKPSFLERGLVFRL*MFRLTI Trigger: GATGGTCAACCTGAACATCCATAACCGGAATACCAA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | TTTAATAATGACATGCCATTCCTCAGGGCCATTATCTTATTTGCTCTATTCCTAACCAGGATCTCTTGCTaGATGGGGACAGAGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: FNNDMPFLRAIILFALFLTRISC*MGTEFM Trigger: CATGAACTCTGTCCCCATCCAGCAAGAGATCCTGGT...TAGGAATAGAGCAAATAAGATAATGGCCCTGAGGAATGGCATGTCATTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATGATTTCGTGGGATTGTaGTTCCTGCCTTCACTATGG | + |
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Preference number: 4 (lower is better) Translates to: EALIGQTALRTLMSLVRNDFVGL*FLPSLW Trigger: CCATAGTGAAGGCAGGAATCACAATCCCACGAAATC...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATCCAATCAACTGGGGATaGATGAGTTTGTGCCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: EALIGQTALRTLMSLVRNPINWG*MSLCLL Trigger: TAGCAGGCACAAACTCATCCATCCCCAGTTGATTGG...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCTTTTGGGATTGGTATTaGTATTCCGGTTATGGATGT | + |
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Preference number: 4 (lower is better) Translates to: DLISWPSVTSEALIGQTAFWDWY*YSGYGC Trigger: ACATCCATAACCGGAATACCAATACCAATCCCAAAA...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGATTCCAAGGTGAGGTaGATCGGTTGTAGTAATCTG | + |
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Preference number: 4 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEDSKVR*IGCSNL Trigger: CAGATTACTACAACCGATCCACCTCACCTTGGAATC...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATTCGGTTGTAGTAATCTaGGGACCTTTTGGGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: EALIGQTALRTLMSLVRNSVVVI*GPFGIG Trigger: ACCAATCCCAAAAGGTCCTCAGATTACTACAACCGA...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR TCA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGAAAATGTTGGTCTGTTaGTCTCTGAGGGGCCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEKMLVC*SLRGLN Trigger: ATTAAGGCCCCTCAGAGATCAACAGACCAACATTTT...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGAGAATTTGGGCATCCTaGATTTCGTGGGATTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: KVNKKQIGTQSNLPSWKERIWAS*ISWDCD Trigger: ATCACAATCCCACGAAATCCAGGATGCCCAAATTCT...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAGAACTTCTTGTATTTTaGGGAGGGTTTCATTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGELLVF*GGFHFP Trigger: GGGAAAATGAAACCCTCCCCAAAATACAAGAAGTTC...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| 3UTR CAA 72 bp | TGCTCTATTCCTATCAAAATGCTTCTGTCTACAGCATaGGCTAATAGTATGAAAACCTTAGTCGGTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CSIPIKMLLSTA*ANSMKTLVGVQ Trigger: CTGAACACCGACTAAGGTTTTCATACTATTAGCCAATGCTGTAGACAGAAGCATTTTGATAGGAATAGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAAAACAAGAAGCAAATTaGTACTCAGTCAAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGKQEAN*YSVKPS Trigger: GGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTT...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAGAGAACTTGGAATTTTaGGTATTTCCAGGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GNSDLISWPSVTSEALIGENLEF*VFPGHC Trigger: ACAATGACCTGGAAATACCCAAAATTCCAAGTTCTC...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATAGGACCTTTTGGGATTaGTATTGGTATTCCGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EALIGQTALRTLMSLVRNRTFWD*YWYSGY Trigger: ATAACCGGAATACCAATACCAATCCCAAAAGGTCCT...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTGCTTATAGGAGAATTTaGATAACTCTTCCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLAYRRI*ITLPNR Trigger: CCTATTGGGAAGAGTTATGCAAATTCTCCTATAAGC...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR GCA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTTCTTTAATAATGACATaGCATTCCTCAGGGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLSLIMT*HSSGPL Trigger: TAATGGCCCTGAGGAATGGCATGTCATTATTAAAGA...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CCA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATGTGAAATCGAGAACTTaGAATTTTGGGTATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EALIGQTALRTLMSLVRNVKSRT*NFGYFQ Trigger: CTGGAAATACCCAAAATTCCAAGTTCTCGATTTCAC...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS TCA 90 bp | GGATGGGGACAGAGTTCATGTGGTAGTCCACGTTCCCATCAGCGTTaGTGCAGCCCAAGTGGCGGCACTTTGCCTCCCAGATCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGQSSCGSPRSHQR*CSPSGGTLPPRSQR Trigger: CCTCTGTGATCTGGGAGGCAAAGTGCCGCCACTTGGGCTGCATCAACGCTGATGGGAACGTGGACTACCACATGAACTCTGTCCCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS GCA 90 bp | GTCCACGTTCCCATCAGCGTTGATGCAGCCCAAGTGGCGGCACTTTaGCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VHVPISVDAAQVAAL*LPDHRGISLRVLIA Trigger: CGCAATGAGGACCCTGAGAGATATCCCTCTGTGATCTGGGAGGCAAAGTGCCGCCACTTGGGCTGCATCAACGCTGATGGGAACGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 90 bp | CCGGGGGAAGTTCTTGTCCTCAGAATTTGGGCATCCTGGATTTCGTaGGATTGTGATTCCTGCCTTCACTATGGCCTCCAGGCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGEVLVLRIWASWIS*DCDSCLHYGLQAQQ Trigger: CTGCTGAGCCTGGAGGCCATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 90 bp | CATCACAGTCCGGGGGAAGTTCTTGTCCTCAGAATTTGGGCATCCTaGATTTCGTGGGATTGTGATTCCTGCCTTCACTATGGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHSPGEVLVLRIWAS*ISWDCDSCLHYGLQ Trigger: CTGGAGGCCATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCCCGGACTGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS TCA 90 bp | AGTTCTTGTCCTCAGAATTTGGGCATCCTGGATTTCGTGGGATTGTaGTTCCTGCCTTCACTATGGCCTCCAGGCTCAGCAGCAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCPQNLGILDFVGL*FLPSLWPPGSAAVA Trigger: TGCTACTGCTGCTGAGCCTGGAGGCCATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTCCAGCCGGAAGGAGTaGGGGCAGTGTGGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKQEANWYSVKPSFLERGSSRKE*GQCGGS Trigger: GGAGCCTCCACACTGCCCCAACTCCTTCCGGCTGGA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 90 bp | CAGGTTGACCATCACAGTCCGGGGGAAGTTCTTGTCCTCAGAATTTaGGCATCCTGGATTTCGTGGGATTGTGATTCCTGCCTTCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: QVDHHSPGEVLVLRI*ASWISWDCDSCLHY Trigger: ATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCCCGGACTGTGATGGTCAACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS TCA 90 bp | ACCTTTTGGGATTGGTATTGGTATTCCGGTTATGGATGTTCAGGTTaGCCATCACAGTCCGGGGGAAGTTCTTGTCCTCAGAATTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFWDWYWYSGYGCSG*PSQSGGSSCPQNLG Trigger: GCCCAAATTCTGAGGACAAGAACTTCCCCCGGACTGTGATGGTCAACCTGAACATCCATAACCGGAATACCAATACCAATCCCAAAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAACGTTCCCATCAGCGTaGATGCAGCCCAAGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GNSDLISWPSVTSEALIGTFPSA*MQPKWR Trigger: CCGCCACTTGGGCTGCATCAACGCTGATGGGAACGT...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGCCAAGTGGCGGCACTTaGCCTCCCAGATCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEPSGGT*PPRSQR Trigger: CCTCTGTGATCTGGGAGGCAAAGTGCCGCCACTTGG...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTTATGGATGTTCAGGTaGACCATCACAGTCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKQEANWYSVKPSFLERGLWMFR*TITVRG Trigger: CCCCCGGACTGTGATGGTCAACCTGAACATCCATAA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAGTCCGGGGGAAGTTCTaGTCCTCAGAATTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GNSDLISWPSVTSEALIGVRGKF*SSEFGH Trigger: ATGCCCAAATTCTGAGGACAAGAACTTCCCCCGGAC...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCGAGGACCTTTTGGGATaGGTATTGGTATTCCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: DLISWPSVTSEALIGQTAEDLLG*VLVFRL Trigger: TAACCGGAATACCAATACCAATCCCAAAAGGTCCTC...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GAATTTTGGGTATTTCCAGGTCATTGTTACTCAAAGACATGCTTTGTTTTGCTTCATAGTCTAACTGCTTaGGGGAGTGTGGGCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EFWVFPGHCYSKTCFVLLHSLTA*GSVGSP Trigger: TGGGGAGCCCACACTCCCCAAAGCAGTTAGACTATG...AAGCAAAACAAAGCATGTCTTTGAGTAACAATGACCTGGAAATACCCAAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGCAGCTCCTTTCTGGGTaGTGTGGTGCCTTGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KVNKKQIGTQSNLPSWKEQLLSG*CGALIR Trigger: TCTGATCAAGGCACCACACAACCCAGAAAGGAGCTG...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGTCTTGTCCTCAGAATTaGGGCATCCTGGATTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVNKKQIGTQSNLPSWKESCPQN*GILDFV Trigger: CACGAAATCCAGGATGCCCAAATTCTGAGGACAAGA...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGACAAACTGCCCTTCTGTCTACAGCATaGGCTAATAGTATGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: DLISWPSVTSEALIGQTALLSTA*ANSMKT Trigger: GGTTTTCATACTATTAGCCAATGCTGTAGACAGAAG...GGCAGTTTGTCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGGGTATTTCCAGGTCATaGTTACTCAAAGACATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKQEANWYSVKPSFLERGGISRS*LLKDML Trigger: AAGCATGTCTTTGAGTAACAATGACCTGGAAATACC...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GAAGCTTTAATTGGACAAACTGCCTTAAGAACTCTAATGAGTTTAGTCCGAAATAGTCGGTGTTCAGTCTaGAAGGCATGTGAAATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EALIGQTALRTLMSLVRNSRCSV*KACEIE Trigger: CTCGATTTCACATGCCTTCAAGACTGAACACCGACT...ATTTCGGACTAAACTCATTAGAGTTCTTAAGGCAGTTTGTCCAATTAAAGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AAAGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGCTTTTGGGATTGGTATaGGTATTCCGGTTATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KVNKKQIGTQSNLPSWKELLGLV*VFRLWM Trigger: CATCCATAACCGGAATACCAATACCAATCCCAAAAG...CTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | AGTAAACAAGAAGCAAATTGGTACTCAGTCAAACCTTCCTTCTTGGAAAGAGGGTGTGAAATCGAGAACTaGGAATTTTGGGTATTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKQEANWYSVKPSFLERGCEIEN*EFWVFP Trigger: TGGAAATACCCAAAATTCCAAGTTCTCGATTTCACA...CCCTCTTTCCAAGAAGGAAGGTTTGACTGAGTACCAATTTGCTTCTTGTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | GGTAATTCAGATCTCATATCTTGGCCAAGTGTTACCTCTGAAGCTTTAATTGGAAGAACTTCTTGTATTTaGGGGAGGGTTTCATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNSDLISWPSVTSEALIGRTSCI*GRVSFS Trigger: GGAAAATGAAACCCTCCCCAAAATACAAGAAGTTCT...TCCAATTAAAGCTTCAGAGGTAACACTTGGCCAAGATATGAGATCTGAATTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS-3UTR CAA 90 bp | TTTAATAATGACATGCCATTCCTCAGGGCCATTATCTTATTTGCTCTATTCCTACGAGAACTTGGAATTTaGGGTATTTCCAGGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: FNNDMPFLRAIILFALFLRELGI*GISRSL Trigger: CAATGACCTGGAAATACCCAAAATTCCAAGTTCTCG...TAGGAATAGAGCAAATAAGATAATGGCCCTGAGGAATGGCATGTCATTATTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CAA 72 bp | CCCACGGACACCAGTATCTTCTCCAGCCGGAAGGAGTaGGGGCAGTGTGGAGGCTCCCTGCGCAGGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTDTSIFSSRKE*GQCGGSLRRTR Trigger: CCTGGTCCTGCGCAGGGAGCCTCCACACTGCCCCAACTCCTTCCGGCTGGAGAAGATACTGGTGTCCGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CAA 72 bp | GCAGTGTGGAGGCTCCCTGCGCAGGACCAGGATCTCTaGCTGGATGGGGACAGAGTTCATGTGGTAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AVWRLPAQDQDL*LDGDRVHVVVH Trigger: GTGGACTACCACATGAACTCTGTCCCCATCCAGCAAGAGATCCTGGTCCTGCGCAGGGAGCCTCCACACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS GCA 72 bp | CCCATCAGCGTTGATGCAGCCCAAGTGGCGGCACTTTaGCTCCCAGATCACAGAGGGATATCTCTCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PISVDAAQVAAL*LPDHRGISLRV Trigger: GACCCTGAGAGATATCCCTCTGTGATCTGGGAGGCAAAGTGCCGCCACTTGGGCTGCATCAACGCTGATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS TCA 72 bp | CAGAGTTCATGTGGTAGTCCACGTTCCCATCAGCGTTaGTGCAGCCCAAGTGGCGGCACTTTGCCTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QSSCGSPRSHQR*CSPSGGTLPPR Trigger: TCTGGGAGGCAAAGTGCCGCCACTTGGGCTGCATCAACGCTGATGGGAACGTGGACTACCACATGAACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS TCA 72 bp | CCTCAGAATTTGGGCATCCTGGATTTCGTGGGATTGTaGTTCCTGCCTTCACTATGGCCTCCAGGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQNLGILDFVGL*FLPSLWPPGSA Trigger: TGCTGAGCCTGGAGGCCATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 72 bp | CATCACAGTCCGGGGGAAGTTCTTGTCCTCAGAATTTaGGCATCCTGGATTTCGTGGGATTGTGATTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HHSPGEVLVLRI*ASWISWDCDSC Trigger: GCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCCCGGACTGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 72 bp | CAGGGTCCTCATTGCGGTGGAGATTCCAAGGTGAGGTaGATCGGTTGTAGTAATCTGAGGACCTTTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QGPHCGGDSKVR*IGCSNLRTFWD Trigger: ATCCCAAAAGGTCCTCAGATTACTACAACCGATCCACCTCACCTTGGAATCTCCACCGCAATGAGGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 72 bp | GTTCTTGTCCTCAGAATTTGGGCATCCTGGATTTCGTaGGATTGTGATTCCTGCCTTCACTATGGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLVLRIWASWIS*DCDSCLHYGLQ Trigger: CTGGAGGCCATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 72 bp | CCGGGGGAAGTTCTTGTCCTCAGAATTTGGGCATCCTaGATTTCGTGGGATTGTGATTCCTGCCTTCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: PGEVLVLRIWAS*ISWDCDSCLHY Trigger: ATAGTGAAGGCAGGAATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 72 bp | GAGGACCTTTTGGGATTGGTATTGGTATTCCGGTTATaGATGTTCAGGTTGACCATCACAGTCCGGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EDLLGLVLVFRL*MFRLTITVRGK Trigger: CTTCCCCCGGACTGTGATGGTCAACCTGAACATCCATAACCGGAATACCAATACCAATCCCAAAAGGTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CAA 90 bp | CGGTTATGGATGTTCAGGTTGACCATCACAGTCCGGGGGAAGTTCTaGTCCTCAGAATTTGGGCATCCTGGATTTCGTGGGATTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: RLWMFRLTITVRGKF*SSEFGHPGFRGIVI Trigger: AATCACAATCCCACGAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCCCGGACTGTGATGGTCAACCTGAACATCCATAACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS TCA 72 bp | GATTGGTATTGGTATTCCGGTTATGGATGTTCAGGTTaGCCATCACAGTCCGGGGGAAGTTCTTGTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DWYWYSGYGCSG*PSQSGGSSCPQ Trigger: CTGAGGACAAGAACTTCCCCCGGACTGTGATGGTCAACCTGAACATCCATAACCGGAATACCAATACCAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CAA 72 bp | GGATTGGTATTGGTATTCCGGTTATGGATGTTCAGGTaGACCATCACAGTCCGGGGGAAGTTCTTGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLVLVFRLWMFR*TITVRGKFLSS Trigger: TGAGGACAAGAACTTCCCCCGGACTGTGATGGTCAACCTGAACATCCATAACCGGAATACCAATACCAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CAA 90 bp | GACCTTTTGGGATTGGTATTGGTATTCCGGTTATGGATGTTCAGGTaGACCATCACAGTCCGGGGGAAGTTCTTGTCCTCAGAATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLLGLVLVFRLWMFR*TITVRGKFLSSEFG Trigger: CCCAAATTCTGAGGACAAGAACTTCCCCCGGACTGTGATGGTCAACCTGAACATCCATAACCGGAATACCAATACCAATCCCAAAAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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| CDS CCA 72 bp | GTGAGGTGGATCGGTTGTAGTAATCTGAGGACCTTTTaGGATTGGTATTGGTATTCCGGTTATGGATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VRWIGCSNLRTF*DWYWYSGYGCS Trigger: TGAACATCCATAACCGGAATACCAATACCAATCCCAAAAGGTCCTCAGATTACTACAACCGATCCACCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648244.1 |
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