RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL15RA (Homo sapiens)

Ensembl gene IDs: ENSG00000134470

Ensembl transcript IDs: ENST00000379971.5, ENST00000379972.6, ENST00000379974.1, ENST00000379977.8, ENST00000397246.7, ENST00000397248.6, ENST00000397250.6, ENST00000397251.7, ENST00000397255.7, ENST00000429135.2, ENST00000435171.6, ENST00000447291.5, ENST00000453922.1, ENST00000525219.6, ENST00000528354.5, ENST00000530685.5, ENST00000532039.5, ENST00000532948.5, ENST00000534292.5, ENST00000620345.4, ENST00000620865.4, ENST00000622442.4

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCC +
Preference number: 1 (lower is better)
Translates to: LGPGSKARQAGRWCP*ECGEPAPSRRRRRP
Trigger: GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR GCA 90 bp GGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCC +
Preference number: 1 (lower is better)
Translates to: GTTGRQVVPMGMRRT*SLAQEAPTRQSVRS
Trigger: GGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR GCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGT +
Preference number: 1 (lower is better)
Translates to: PGSKARQAGRWCPWE*GEPAPSRRRRRPGS
Trigger: ACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR GCA 90 bp GGGAAGCTGGGCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGC +
Preference number: 1 (lower is better)
Translates to: GKLGPGSKARQAGRW*PWECGEPAPSRRRR
Trigger: GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR CCA 90 bp CCTGGGAAGCTGGGCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: PGKLGPGSKARQAGR*CPWECGEPAPSRRR
Trigger: CCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR TCA 90 bp GGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTTGCTCCT +
Preference number: 1 (lower is better)
Translates to: GEPAPSRRRRRPGSP*DPAGTSERPGELAP
Trigger: AGGAGCAAGCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR CCA 90 bp CTTCATCTCTGCTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: LHLCCWSPKSPAEPP*LPFQRWPAGEFACK
Trigger: TTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR GCA 90 bp CCGAGTTTCATAGGTGGTGAGAGCAGTTTTCCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCATGGCTTCCA +
Preference number: 1 (lower is better)
Translates to: PSFIGGESSFPSLHL*CWSPKSPAEPPWLP
Trigger: TGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACCTATGAAACTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR GCA 90 bp AGTTTCATAGGTGGTGAGAGCAGTTTTCCAAGTCTTCATCTCTGCTaGTGGTCCCCCAAGTCACCGGCAGAGCCTCCATGGCTTCCATTT +
Preference number: 1 (lower is better)
Translates to: SFIGGESSFPSLHLC*WSPKSPAEPPWLPF
Trigger: AAATGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACCTATGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR CCA 90 bp TTCATAGGTGGTGAGAGCAGTTTTCCAAGTCTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCAGAGCCTCCATGGCTTCCATTTCAA +
Preference number: 1 (lower is better)
Translates to: FIGGESSFPSLHLCC*SPKSPAEPPWLPFQ
Trigger: TTGAAATGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACCTATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR-3UTR GCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 2 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR GCA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 2 (lower is better)
Translates to: GGAHGNAENLLPRAGGADGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 2 (lower is better)
Translates to: GNAENLLPRAGGADPAVRRQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...ACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 2 (lower is better)
Translates to: GRWCPWECGEPAPSRRRRWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR GCA 90 bp GGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCG +
Preference number: 2 (lower is better)
Translates to: GNAENLLPRAGGADPAVRWCPWE*GEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA...ACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR GCA 90 bp GCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCACAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 2 (lower is better)
Translates to: AHGNAENLLPRAGGADPAQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...TGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR GCA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 2 (lower is better)
Translates to: GGAHGNAENLLPRAGGADQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 2 (lower is better)
Translates to: GGADPAVREILLGLLRGLRQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR GCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAAGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 2 (lower is better)
Translates to: PGSKARQAGRWCPWECGEGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCT +
Preference number: 2 (lower is better)
Translates to: ALGPRHDRQAGGAHGNAEGRWCP*ECGEPA
Trigger: AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC...CTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 2 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCCTTTGGTCTCTCCTaGGAAGCTGGGCCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRAFGLS*EAGPWV
Trigger: GACCCAGGGCCCAGCTTCCCAGGAGAGACCAAAGGC...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR TCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCT +
Preference number: 2 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLRPGSP*DPAGTS
Trigger: AGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCG...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGG +
Preference number: 2 (lower is better)
Translates to: AGGADPAVREILLGLLRGPAEPP*LPFQRW
Trigger: CCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGG...GCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR-3UTR GCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGTGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 2 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR GCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 2 (lower is better)
Translates to: PGSKARQAGRWCPWECGEQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR TCA 90 bp GGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: GNAENLLPRAGGADPAVREFHRW*EQFSKS
Trigger: AGACTTGGAAAACTGCTCTCACCACCTATGAAACTC...ACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR CAA 90 bp GCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTT +
Preference number: 2 (lower is better)
Translates to: AVREILLGLLRGLVS*LLEPASLHLFSVVF
Trigger: AAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CCA 90 bp GCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTTTCATCTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 2 (lower is better)
Translates to: AERLLHSGLSWAGFPEFHLPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...ATGAAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR-3UTR TCA 90 bp CCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTGTGGTTCATAGGTTTTaGAAAGAGGAGGGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: PGELAPGARFLAPLLSRLVVHRF*KEEGVA
Trigger: GGCAACCCCCTCCTCTTTTCAAAACCTATGAACCAC...AAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR-3UTR GCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCATGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 2 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKAWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR GCA 72 bp GGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCC +
Preference number: 3 (lower is better)
Translates to: GRQVVPMGMRRT*SLAQEAPTRQS
Trigger: GGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR TCA 72 bp GCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: APSRRRRRPGSP*DPAGTSERPGE
Trigger: CTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR GCA 72 bp GGCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAACCTGCTCCCTCGCGC +
Preference number: 3 (lower is better)
Translates to: GPGSKARQAGRW*PWECGEPAPSR
Trigger: GCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR CCA 72 bp GGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: GSKARQAGRWCP*ECGEPAPSRRR
Trigger: CCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR CCA 72 bp CTGGGCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCG +
Preference number: 3 (lower is better)
Translates to: LGPGSKARQAGR*CPWECGEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CAA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 3 (lower is better)
Translates to: GGAHGNAENLLPRAGGADLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CAA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCC +
Preference number: 3 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQRGLVS*LLEPAS
Trigger: GGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCT...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CAA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 3 (lower is better)
Translates to: ADPAVREILLGLLRGLVSLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CAA 90 bp CCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGACCTGCTCAGAAGCCTTaGGTCTCTCCTGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: PWVQGTTGRQVVPMGMRRPAQKP*VSPGKL
Trigger: CAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGG...TCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR CCA 72 bp TGCTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTT +
Preference number: 3 (lower is better)
Translates to: CCWSPKSPAEPP*LPFQRWPAGEF
Trigger: AAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR CCA 72 bp TCACCGGCAGAGCCTCCATGGCTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: SPAEPPWLPFQR*PAGEFACKAGG
Trigger: ACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR GCA 72 bp GGTGGTGAGAGCAGTTTTCCAAGTCTTCATCTCTGCTaGTGGTCCCCCAAGTCACCGGCAGAGCCTCCATGG +
Preference number: 3 (lower is better)
Translates to: GGESSFPSLHLC*WSPKSPAEPPW
Trigger: CCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR CCA 72 bp GGTGAGAGCAGTTTTCCAAGTCTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCAGAGCCTCCATGGCTT +
Preference number: 3 (lower is better)
Translates to: GESSFPSLHLCC*SPKSPAEPPWL
Trigger: AAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR GCA 72 bp ATAGGTGGTGAGAGCAGTTTTCCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCA +
Preference number: 3 (lower is better)
Translates to: IGGESSFPSLHL*CWSPKSPAEPP
Trigger: TGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
3UTR-3UTR CAA 90 bp ACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 3 (lower is better)
Translates to: TSSQSSLAKAERLLHSGLLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...AAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
3UTR-3UTR CAA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 3 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
3UTR TCA 72 bp CTTAGCTGGGCTGGTTTCCCCGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCTTCATCTCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LSWAGFPEFHRW*EQFSKSSSLLL
Trigger: CAGCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACCTATGAAACTCGGGGAAACCAGCCCAGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCCCCGCCGCGGGGCCATaGCGGCAGCTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPPAAGP*RQLHRT
Trigger: TGTCCTGTGGAGCTGCCGCCATGGCCCCGCGGCGGG...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCTGGCGAGCGCTGCTCTaGGACCTGCCGCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: HGNAENLLPRAGGADPAVWRALL*DLPPRQ
Trigger: CTGGCGGGGCGGCAGGTCCCAGAGCAGCGCTCGCCA...GACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCTGTGAGCGGCCGGCCTaGGTGAGTGCCCGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPCERPA*VSARGG
Trigger: ACCTCCGCGGGCACTCACCCAGGCCGGCCGCTCACA...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR CCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGCCCGCCGCGGGGCCATaGCGGCAGCTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRPAAGP*RQLHRT
Trigger: TGTCCTGTGGAGCTGCCGCCATGGCCCCGCGGCGGG...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCACCCGCCGCGGGGCCATaGCGGCAGCTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: DRQAGGAHGNAENLLPRAPAAGP*RQLHRT
Trigger: TGTCCTGTGGAGCTGCCGCCATGGCCCCGCGGCGGG...TGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCACGGCTCGGATCCACTTaGCCTCGCCCGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DRQAGGAHGNAENLLPRARLGST*PRPALV
Trigger: GACCAGCGCCGGGCGAGGTCAAGTGGATCCGAGCCG...TGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR TCA 90 bp GCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCACGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: AHGNAENLLPRAGGADPARPGSP*DPAGTS
Trigger: AGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCG...TGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: PMGMRRTCSLAQEAPTRQRPGSP*DPAGTS
Trigger: AGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCG...CTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HGNAENLLPRAGGADPAVGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...GACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGCTGTGGGGTCACCCCTaGCGTCGTTACTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PMGMRRTCSLAQEAPTRQLWGHP*RRYCGG
Trigger: CCCTCCACAGTAACGACGGCAGGGGTGACCCCACAG...CTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp CCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTACACACCTGGCGGCTaGTGGGAGGCGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: PMGMRRTCSLAQEAPTRQYTPGG*WEADAV
Trigger: CACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTA...CTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 4 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 4 (lower is better)
Translates to: NAENLLPRAGGADPAVREWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...CTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGATCCACAGGACACCGCTaGACTCCCCGGGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: RWCPWECGEPAPSRRRRRSTGHR*TPRASA
Trigger: AGCGCTCGCCCGGGGAGTCCAGCGGTGTCCTGTGGA...TCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379977.8
ENST00000397248.6
CDS-3UTR TCA 90 bp AGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTAGCGGCCGGCCTGGGTaGGTGCCCGCGGAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: RPGELAPGARFLAPLLSRSGRPG*VPAEVS
Trigger: CGACACCTCCGCGGGCACTCACCCAGGCCGGCCGCT...ACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR GCA 90 bp GGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGCTGGGACCTCCAGTGTaGACTCGGTCCGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GADPAVREILLGLLRGLVLGPPV*TRSGVP
Trigger: GGGGACACCGGACCGAGTGCACACTGGAGGTCCCAG...CACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR GCA 90 bp CAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QAGGAHGNAENLLPRAGGGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...GCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCACACCTGGCGGCTGGTaGGAGGCGGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPTPGGW*EADAVS
Trigger: ACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGT...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCTGTGGATACACACCTaGCGGCTGGTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGAHGNAENLLPRAGGADLWIHT*RLVGGG
Trigger: TCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAG...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCGCACTCCGTCAGGCTaGACGTGCCGGCTTTACGCT +
Preference number: 4 (lower is better)
Translates to: GGAHGNAENLLPRAGGADRTPSG*TCRLYA
Trigger: AGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCG...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGTCCACAGGACACCGCTaGACTCCCCGGGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSSTGHR*TPRASA
Trigger: AGCGCTCGCCCGGGGAGTCCAGCGGTGTCCTGTGGA...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379977.8
ENST00000397248.6
CDS-3UTR CCA 90 bp CATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCTGTGGAGGGTGGCGCTaGCCTTTGGTGAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: HGNAENLLPRAGGADPAVCGGWR*PLVNQG
Trigger: GCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACA...GACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR TCA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTTCTTGGCTGTTGTCTaGGAGGGGGTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCFLAVV*EGVPWE
Trigger: CTCCCACGGCACCCCCTCTCAGACAACAGCCAAGAA...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCTTCTTGGCTGTTGTCTaGGAGGGGGTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HGNAENLLPRAGGADPAVFLAVV*EGVPWE
Trigger: CTCCCACGGCACCCCCTCTCAGACAACAGCCAAGAA...GACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp AATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NAENLLPRAGGADPAVREGRRML*VPSSWL
Trigger: CAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCC...CTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGGGCGCTGGCCTTTGGTaGACCAGGGCAGGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRGAGLW*TRAGSL
Trigger: TAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCC...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GRWCPWECGEPAPSRRRRQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGACACCTGGCGGCTGGTaGGAGGCGGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GGADPAVREILLGLLRGLTPGGW*EADAVS
Trigger: ACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGT...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGACACCTGGCGGCTGGTaGGAGGCGGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: ALGPRHDRQAGGAHGNAETPGGW*EADAVS
Trigger: ACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGT...CTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGTACACACCTGGCGGCTaGTGGGAGGCGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRYTPGG*WEADAV
Trigger: CACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTA...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCCTGTGGATACACACCTaGCGGCTGGTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: QAGGAHGNAENLLPRAGGLWIHT*RLVGGG
Trigger: TCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAG...GCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGCTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PMGMRRTCSLAQEAPTRQLPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...CTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCCGCACTCCGTCAGGCTaGACGTGCCGGCTTTACGCT +
Preference number: 4 (lower is better)
Translates to: QAGGAHGNAENLLPRAGGRTPSG*TCRLYA
Trigger: AGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCG...GCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGCTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NAENLLPRAGGADPAVRELGVVQ*ATFVAL
Trigger: CAAGGCCACGAATGTCGCCCACTGGACAACCCCCAG...CTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: HGNAENLLPRAGGADPAVGRWCP*ECGEPA
Trigger: AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC...GACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRRQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGGCCTTTGGTCTCTCCTaGGAAGCTGGGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GADPAVREILLGLLRGLVAFGLS*EAGPWV
Trigger: GACCCAGGGCCCAGCTTCCCAGGAGAGACCAAAGGC...CACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGGAGGCTCTCTGGCTGTaGGGTCACCCCTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSEALWL*GHPCRR
Trigger: ACGACGGCAGGGGTGACCCCACAGCCAGAGAGCCTC...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp CCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAGAGGCTCTCTGGCTGTaGGGTCACCCCTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: PWVQGTTGRQVVPMGMRREALWL*GHPCRR
Trigger: ACGACGGCAGGGGTGACCCCACAGCCAGAGAGCCTC...TCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR TCA 90 bp GCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALGPRHDRQAGGAHGNAEGRRML*VPSSWL
Trigger: CAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCC...CTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCGCAGACAGAGGCCCTTaGCTTGAGGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCADRGP*LEVACQ
Trigger: CTGGCATGCTACCTCAAGTCAAGGGCCTCTGTCTGC...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR TCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCCGGGGGAGTTTGCCTTaGCTTGAGGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPRGSLP*LEVACQ
Trigger: CTGGCATGCTACCTCAAGTCAAGGCAAACTCCCCCG...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSRPGSP*DPAGTS
Trigger: AGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCG...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCCTCCGCGCTCGTCGTaGTCTGGGACCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLPPRSS*SGTSSV
Trigger: CACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGG...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR GCA 90 bp AGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: RWCPWECGEPAPSRRRRRQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...TCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACGTCCCTGTCCATGTGTaGAGAGCAGCTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GGAHGNAENLLPRAGGADVPVHV*RAAGDR
Trigger: CCTGTCTCCAGCTGCTCTGCACACATGGACAGGGAC...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCTGTGGGGTCACCCCTaGCGTCGTTACTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSLWGHP*RRYCGG
Trigger: CCCTCCACAGTAACGACGGCAGGGGTGACCCCACAG...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR GCA 90 bp GACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTTGCGCTGCTCTGGGACCTaGCGCCCCGCCAGTCGCATT +
Preference number: 4 (lower is better)
Translates to: DPAVREILLGLLRGLVSLRCSGT*RPASRI
Trigger: AATGCGACTGGCGGGGCGGCAGGTCCCAGAGCAGCG...CAAGCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR CCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGACACCTGGCGGCTGGTaGGAGGCGGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQTPGGW*EADAVS
Trigger: ACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGT...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCTACACACCTGGCGGCTaGTGGGAGGCGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRYTPGG*WEADAV
Trigger: CACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTA...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGATACACACCTGGCGGCTaGTGGGAGGCGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: PWVQGTTGRQVVPMGMRRYTPGG*WEADAV
Trigger: CACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTA...TCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGACTGTGGATACACACCTaGCGGCTGGTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PWVQGTTGRQVVPMGMRRLWIHT*RLVGGG
Trigger: TCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAG...TCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCTGTGGATACACACCTaGCGGCTGGTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSLWIHT*RLVGGG
Trigger: TCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAG...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCCTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPLPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCCGCACTCCGTCAGGCTaGACGTGCCGGCTTTACGCT +
Preference number: 4 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRRTPSG*TCRLYA
Trigger: AGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCG...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCCTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RQAGRWCPWECGEPAPSRLGVVQ*ATFVAL
Trigger: CAAGGCCACGAATGTCGCCCACTGGACAACCCCCAG...GCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCCTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QAGGAHGNAENLLPRAGGLGVVQ*ATFVAL
Trigger: CAAGGCCACGAATGTCGCCCACTGGACAACCCCCAG...GCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCCTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCLHLCC*SPKSPA
Trigger: TGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGCTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: NAENLLPRAGGADPAVRELHLCC*SPKSPA
Trigger: TGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG...CTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTRYCGG*RWPLVN
Trigger: GTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACG...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR TCA 90 bp GACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: DRQAGGAHGNAENLLPRAGRRML*VPSSWL
Trigger: CAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCC...TGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ADPAVREILLGLLRGLVSGRRML*VPSSWL
Trigger: CAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCC...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTCCCTGCGCTCGGTTGTaGGCGGCCGGCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSPCARL*AAGLGE
Trigger: CTCACCCAGGCCGGCCGCTCACAACCGAGCGCAGGG...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR TCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLRPGSP*DPAGTS
Trigger: AGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCG...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp AAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCCGACCCGGCAGTCCGTaGGATCCTGCTGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: KARQAGRWCPWECGEPAPRPGSP*DPAGTS
Trigger: AGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCG...GGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCCTCTCCAGCCCTCTCTaGGGCTCGGATCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRLSSPL*GSDPLD
Trigger: GTCAAGTGGATCCGAGCCGCAGAGAGGGCTGGAGAG...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR GCA 90 bp GGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCTTGACCCAGATGTCTaGGTGTTCCACGGACATGGG +
Preference number: 4 (lower is better)
Translates to: GRWCPWECGEPAPSRRRRLDPDV*VFHGHG
Trigger: CCCATGTCCGTGGAACACGCAGACATCTGGGTCAAG...GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: ADPAVREILLGLLRGLVSWCPWE*GEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSWCPWE*GEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGGTCCCTGTCCATGTGTaGAGAGCAGCTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRVPVHV*RAAGDR
Trigger: CCTGTCTCCAGCTGCTCTGCACACATGGACAGGGAC...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTGGAGGTGGCGAGCGCTaGTCTGGGACCTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSGGGER*SGTCRP
Trigger: GGGGCGGCAGGTCCCAGAGCAGCGCTCGCCACCTCC...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR CCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGACACCTGGCGGCTGGTaGGAGGCGGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLTPGGW*EADAVS
Trigger: ACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGT...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGCTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGADPAVREILLGLLRGLLPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAAGTGGGCGACATTCGTaGCCTTGTTCAACACGCACT +
Preference number: 4 (lower is better)
Translates to: AHGNAENLLPRAGGADPASGRHS*PCSTRT
Trigger: AGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACT...TGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCCACTCCGGACTTAGCTaGGCTGGTTTCCCCGAGTTT +
Preference number: 4 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCHSGLS*AGFPEF
Trigger: AAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTG...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRGRWCP*ECGEPA
Trigger: AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLRQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp AAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: KARQAGRWCPWECGEPAPRQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...GGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTTGTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 4 (lower is better)
Translates to: DPAVREILLGLLRGLVSLWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...CAAGCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGTGTGGAGGGTGGCGCTaGCCTTTGGTGAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLCGGWR*PLVNQG
Trigger: GCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACA...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CCA 90 bp GCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ALGPRHDRQAGGAHGNAERYCGG*RWPLVN
Trigger: GTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACG...CTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCCTGCCGTCGTTACTGTaGAGGGTGGCGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRLPSLL*RVALAF
Trigger: AAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAG...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGCTGCCGTCGTTACTGTaGAGGGTGGCGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQLPSLL*RVALAF
Trigger: AAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAG...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCCTTGTCCGATGGTGGTaGCACTGGGGGCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QAGGAHGNAENLLPRAGGLVRWW*HWGQFS
Trigger: GGAAAACTGCCCCCAGTGCCACCACCATCGGACAAG...GCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR TCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGTTCTTGGCTGTTGTCTaGGAGGGGGTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLFLAVV*EGVPWE
Trigger: CTCCCACGGCACCCCCTCTCAGACAACAGCCAAGAA...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCTTGTCTGAGAGGGGGTaGCGTGGGAGGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRLSERG*RGRTHD
Trigger: GTCATGAGTCCTCCCACGGCACCCCCTCTCAGACAA...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGTTGTCTGAGAGGGGGTaGCGTGGGAGGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQLSERG*RGRTHD
Trigger: GTCATGAGTCCTCCCACGGCACCCCCTCTCAGACAA...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGCTTGACCCAGATGTCTaGGTGTTCCACGGACATGGG +
Preference number: 4 (lower is better)
Translates to: GGADPAVREILLGLLRGLLDPDV*VFHGHG
Trigger: CCCATGTCCGTGGAACACGCAGACATCTGGGTCAAG...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCCCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPPSLHL*CWSPKS
Trigger: TGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGG...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGTGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: ALGPRHDRQAGGAHGNAEWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...CTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLWCPWE*GEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLWCPWE*GEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCTTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCT +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPFEGIS*EPGTIA
Trigger: AGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAA...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGCTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQLPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCACTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: DRQAGGAHGNAENLLPRALPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...TGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: SKARQAGRWCPWECGEPARQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTTGTGTGGAGGGTGGCGCTaGCCTTTGGTGAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: DPAVREILLGLLRGLVSLCGGWR*PLVNQG
Trigger: GCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACA...CAAGCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQRYCGG*RWPLVN
Trigger: GTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACG...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGCGATGGTGGTGGCACTaGGGGCAGTTTTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: GGADPAVREILLGLLRGLRWWWH*GQFSIV
Trigger: GACAATGGAAAACTGCCCCCAGTGCCACCACCATCG...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR TCA 90 bp GCCCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGCCGTGGGAGGACTCATaGCTGCTTATCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ALGPRHDRQAGGAHGNAEPWEDS*LLISVV
Trigger: AACCACAGAGATAAGCAGTCATGAGTCCTCCCACGG...CTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp AGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCGTGGGAGGACTCATaGCTGCTTATCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: RWCPWECGEPAPSRRRRRPWEDS*LLISVV
Trigger: AACCACAGAGATAAGCAGTCATGAGTCCTCCCACGG...TCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp AATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGGTGGTTCATAGGTTTTaGAAAGAGGAGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: NAENLLPRAGGADPAVREVVHRF*KEEGVA
Trigger: GGCAACCCCCTCCTCTTTTCAAAACCTATGAACCAC...CTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR TCA 90 bp GGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCACAAGCTGTAGCTCTTaGCCCAGATGTCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: GRWCPWECGEPAPSRRRRTSCSS*PRCLRV
Trigger: AACACGCAGACATCTGGGTCAAGAGCTACAGCTTGT...GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCGGGGGAGTTTGCCTTaGCTTGAGGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLRGSLP*LEVACQ
Trigger: CTGGCATGCTACCTCAAGTCAAGGCAAACTCCCCCG...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTGGCGCTGGCCTTTGGTaGACCAGGGCAGGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ERPGELAPGARFLAPLLSGAGLW*TRAGSL
Trigger: TAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCC...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCTTGTCTGAGAGGGGGTaGCGTGGGAGGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLLSERG*RGRTHD
Trigger: GTCATGAGTCCTCCCACGGCACCCCCTCTCAGACAA...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGCTGGTGGGAGGCGGATaGTGTGAGTTCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQLVGGG*CEFPVL
Trigger: AAGAACTGGGAACTCACAGCATCCGCCTCCCACCAG...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCCCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RQAGRWCPWECGEPAPSRPSLHL*CWSPKS
Trigger: TGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGG...GCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp AGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RWCPWECGEPAPSRRRRRPSLHL*CWSPKS
Trigger: TGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGG...TCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: ADPAVREILLGLLRGLVSWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCAGCTTTCAGATATTCTaGTCCTTCCCGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPSFQIF*SFPPGQ
Trigger: CTGTCCTGGCGGGAAGGAGCAGAATATCTGAAAGCT...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR CCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGCTGTGTTGTTTGAGCTaGGAGATGAAGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRLCCLS*EMKLRA
Trigger: AGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAG...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGCTGTGTTGTTTGAGCTaGGAGATGAAGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GADPAVREILLGLLRGLVLCCLS*EMKLRA
Trigger: AGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAG...CACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCT +
Preference number: 4 (lower is better)
Translates to: DRQAGGAHGNAENLLPRATVVSL*PCGYTP
Trigger: AGGTGTGTATCCACAGGGCCACAGCGACACCACTGT...TGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSKARQAGRWCPWECGEPAEPP*LPFQRW
Trigger: CCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGG...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGACCTCGCCCGGCGCTaGTCGCCTCCAGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKADLARR*SPPAAP
Trigger: CGGAGCAGCTGGAGGCGACCAGCGCCGGGCGAGGTC...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR CCA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGCACTCCGTCAGGCTaGACGTGCCGGCTTTACGCT +
Preference number: 4 (lower is better)
Translates to: ERPGELAPGARFLAPLLSRTPSG*TCRLYA
Trigger: AGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCG...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCCCGTGGGAGGACTCATaGCTGCTTATCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ADPAVREILLGLLRGLVSPWEDS*LLISVV
Trigger: AACCACAGAGATAAGCAGTCATGAGTCCTCCCACGG...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGACAAGCTGTAGCTCTTaGCCCAGATGTCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRTSCSS*PRCLRV
Trigger: AACACGCAGACATCTGGGTCAAGAGCTACAGCTTGT...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGACAAGCTGTAGCTCTTaGCCCAGATGTCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: GADPAVREILLGLLRGLVTSCSS*PRCLRV
Trigger: AACACGCAGACATCTGGGTCAAGAGCTACAGCTTGT...CACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTGGCGCTGGCCTTTGGTaGACCAGGGCAGGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: PGELAPGARFLAPLLSRLGAGLW*TRAGSL
Trigger: TAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCC...AAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp TCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTTTGTCTGAGAGGGGGTaGCGTGGGAGGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: SKARQAGRWCPWECGEPALSERG*RGRTHD
Trigger: GTCATGAGTCCTCCCACGGCACCCCCTCTCAGACAA...AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGAAAAGAGGAGGGGGTTaGCCTCAAATCAACAGACGC +
Preference number: 4 (lower is better)
Translates to: GGADPAVREILLGLLRGLKRGGG*PQINRR
Trigger: GCGTCTGTTGATTTGAGGGCAACCCCCTCCTCTTTT...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR GCA 90 bp TCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTGTCCGGTGTCCCCACTaGGAAGAGAGTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SKARQAGRWCPWECGEPAVRCPH*EESGQS
Trigger: ACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGAC...AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR GCA 90 bp AAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: KARQAGRWCPWECGEPAPWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...GGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGTGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTTGGTGCCCATGGGAATaGGGAGAACCTGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: RPGELAPGARFLAPLLSRWCPWE*GEPAPS
Trigger: CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA...ACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CAAGTCTTCATCTCTGCTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCATGGCCAGGCAGGCAGGTGGTaGCCATGGGAATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: QVFISAAGPPSHRQSLHGQAGRW*PWECGE
Trigger: TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG...GCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAGACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CCA 90 bp GACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCATTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCT +
Preference number: 4 (lower is better)
Translates to: DRQAGGAHGNAENLLPRAFEGIS*EPGTIA
Trigger: AGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAA...TGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTACACACCTGGCGGCTaGTGGGAGGCGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: MASISTLASGGVCLQSRWYTPGG*WEADAV
Trigger: CACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTA...CCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp GAGCCTCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAACTGTGGATACACACCTaGCGGCTGGTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: EPPWLPFQRWPAGEFACKLWIHT*RLVGGG
Trigger: TCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAG...TTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCT +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLTVVSL*PCGYTP
Trigger: AGGTGTGTATCCACAGGGCCACAGCGACACCACTGT...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCAAATGTACCGCTCCCTaGAGTACAAGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPKCTAP*STSCSS
Trigger: AGAGCTACAGCTTGTACTCCAGGGAGCGGTACATTT...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGAGTGGGCGACATTCGTaGCCTTGTTCAACACGCACT +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQSGRHS*PCSTRT
Trigger: AGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACT...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTGGGAAGCTGGGCCCTaGGTCCAAGGCACGACAGGC +
Preference number: 4 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSWEAGP*VQGTTG
Trigger: GCCTGTCGTGCCTTGGACCCAGGGCCCAGCTTCCCA...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCGTGGGAGGACTCATaGCTGCTTATCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLPWEDS*LLISVV
Trigger: AACCACAGAGATAAGCAGTCATGAGTCCTCCCACGG...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASISTLASGGVCLQSRWFGRRML*VPSSWL
Trigger: CAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCC...GAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp GGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCTGCCGGCTTTACGCTTaGAACCAGAGTTACAAATGT +
Preference number: 4 (lower is better)
Translates to: GRWCPWECGEPAPSRRRRCRLYA*NQSYKC
Trigger: ACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCA...GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAAGAGTTTGCCTTGACTTaGGGTAGCATGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGSKARQAGRWCPWECGEEFALT*GSMPGE
Trigger: CTCTCCTGGCATGCTACCTCAAGTCAAGGCAAACTC...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCEFHRW*EQFSKS
Trigger: AGACTTGGAAAACTGCTCTCACCACCTATGAAACTC...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCATGGCTTCCATTTCAACGCTGGCCCGGGACAATAGCTaGTGTTGTGGCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LLVPQVTGRASMASISTLARDNS*CCGRCV
Trigger: AACACAGCGGCCACAACAGCAGCTATTGTCCCGGGC...CAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR GCA 90 bp AGAGCCTCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAGCCAGCGGGGGAGTTTaGCTGCAAAGCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RASMASISTLASGGVCLQASGGV*LQSRWF
Trigger: GAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGC...TTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR GCA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTGTCCCTGTCCATGTGTaGAGAGCAGCTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: ERPGELAPGARFLAPLLSVPVHV*RAAGDR
Trigger: CCTGTCTCCAGCTGCTCTGCACACATGGACAGGGAC...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCCTGTGGGGTCACCCCTaGCGTCGTTACTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSLWGHP*RRYCGG
Trigger: CCCTCCACAGTAACGACGGCAGGGGTGACCCCACAG...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACTGTGTTGTTTGAGCTaGGAGATGAAGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGSKARQAGRWCPWECGELCCLS*EMKLRA
Trigger: AGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAG...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCTCTCTGTGGTTCCTGTaGAAGGTGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPSLWFL*KVILKA
Trigger: TGCCTTCAAAATCACCTTCCACAGGAACCACAGAGA...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTDCLSL*FLWKVI
Trigger: AATCACCTTCCACAGGAACCACAGAGATAAGCAGTC...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCT +
Preference number: 4 (lower is better)
Translates to: SKARQAGRWCPWECGEPATVVSL*PCGYTP
Trigger: AGGTGTGTATCCACAGGGCCACAGCGACACCACTGT...AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: ERPGELAPGARFLAPLLSPAEPP*LPFQRW
Trigger: CCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGG...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAACGCCTTCGGCTTTCCTaGTCTCCCTCCGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKRLRLS*SPSAAL
Trigger: CAGGGCCGCGGAGGGAGACCAGGAAAGCCGAAGGCG...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR CCA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: ERPGELAPGARFLAPLLSLHLCC*SPKSPA
Trigger: TGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTCGACAGGCAGGCAGGTaGTGCCCATGGGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSRQAGR*CPWECG
Trigger: TCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTCGGGGGAGTTTGCCTTaGCTTGAGGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: PGELAPGARFLAPLLSRLRGSLP*LEVACQ
Trigger: CTGGCATGCTACCTCAAGTCAAGGCAAACTCCCCCG...AAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: RQAGRWCPWECGEPAPSREFHRW*EQFSKS
Trigger: AGACTTGGAAAACTGCTCTCACCACCTATGAAACTC...GCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: GGADPAVREILLGLLRGLEFHRW*EQFSKS
Trigger: AGACTTGGAAAACTGCTCTCACCACCTATGAAACTC...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCTGGTGGGAGGCGGATaGTGTGAGTTCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ERPGELAPGARFLAPLLSLVGGG*CEFPVL
Trigger: AAGAACTGGGAACTCACAGCATCCGCCTCCCACCAG...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp AGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTGACCCAGATGTCTaGGTGTTCCACGGACATGGG +
Preference number: 4 (lower is better)
Translates to: RPGELAPGARFLAPLLSRLDPDV*VFHGHG
Trigger: CCCATGTCCGTGGAACACGCAGACATCTGGGTCAAG...ACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGTCTCTGTGGTTCCTGTaGAAGGTGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRSLWFL*KVILKA
Trigger: TGCCTTCAAAATCACCTTCCACAGGAACCACAGAGA...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATACACCTGGCGGCTGGTaGGAGGCGGATGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: FHFNAGQRGSLPAKQVVHTPGGW*EADAVS
Trigger: ACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGT...ATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp AGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCACTCCGGACTTAGCTaGGCTGGTTTCCCCGAGTTT +
Preference number: 4 (lower is better)
Translates to: RPGELAPGARFLAPLLSRHSGLS*AGFPEF
Trigger: AAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTG...ACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTTTGAAGCCTTTGGTCTCTCCTaGGAAGCTGGGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TLASGGVCLQSRWFIGFEAFGLS*EAGPWV
Trigger: GACCCAGGGCCCAGCTTCCCAGGAGAGACCAAAGGC...TTCAAAACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CCA 90 bp GCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTTTCATCTGCCGTCGTTACTGTaGAGGGTGGCGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AERLLHSGLSWAGFPEFHLPSLL*RVALAF
Trigger: AAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAG...ATGAAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CCA 90 bp CAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGAGGCTCTCTGGCTGTaGGGTCACCCCTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: QSSLAKAERLLHSGLSWAEALWL*GHPCRR
Trigger: ACGACGGCAGGGGTGACCCCACAGCCAGAGAGCCTC...AGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGAGGCTCTCTGGCTGTaGGGTCACCCCTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKEALWL*GHPCRR
Trigger: ACGACGGCAGGGGTGACCCCACAGCCAGAGAGCCTC...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR TCA 90 bp TCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATATTCTTGGCTGTTGTCTaGGAGGGGGTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SISTLASGGVCLQSRWFIFLAVV*EGVPWE
Trigger: CTCCCACGGCACCCCCTCTCAGACAACAGCCAAGAA...TATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp CTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCAGCAGACAGAGGCCCTTaGCTTGAGGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPFQRWPAGEFACKAGGSADRGP*LEVACQ
Trigger: CTGGCATGCTACCTCAAGTCAAGGGCCTCTGTCTGC...TGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp AGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTGAGTTTGCCTTGACTTaGGGTAGCATGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RPGELAPGARFLAPLLSREFALT*GSMPGE
Trigger: CTCTCCTGGCATGCTACCTCAAGTCAAGGCAAACTC...ACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCGCCCGGGACAATAGCTaGTGTTGTGGCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSARDNS*CCGRCV
Trigger: AACACAGCGGCCACAACAGCAGCTATTGTCCCGGGC...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp TGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTCTGGTGGGAGGCGGATaGTGTGAGTTCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: WLPFQRWPAGEFACKAGGLVGGG*CEFPVL
Trigger: AAGAACTGGGAACTCACAGCATCCGCCTCCCACCAG...ACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR GCA 90 bp ATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTGCCAGCGGGGGAGTTTaGCTGCAAAGCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ISTLASGGVCLQSRWFIGASGGV*LQSRWF
Trigger: GAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGC...ACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR GCA 90 bp CAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTCTGGTCGCCTCCAGCTaGTCCGCCTTCGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QSSLAKAERLLHSGLSWALVASS*SAFGFP
Trigger: AGGAAAGCCGAAGGCGGAGCAGCTGGAGGCGACCAG...AGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR GCA 90 bp TGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGAGGAATGCGGAGAACCTaGTCCCTCGCGCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: CTSSQSSLAKAERLLHSGGMRRT*SLAQEA
Trigger: CGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCC...TCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAACTGTGGGGTCACCCCTaGCGTCGTTACTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKLWGHP*RRYCGG
Trigger: CCCTCCACAGTAACGACGGCAGGGGTGACCCCACAG...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR CCA 90 bp CAGAGCCTCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCATTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCT +
Preference number: 4 (lower is better)
Translates to: QSLHGFHFNAGQRGSLPAFEGIS*EPGTIA
Trigger: AGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAA...TGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCTCTCTGTGGTTCCTGTaGAAGGTGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ADPAVREILLGLLRGLVSSLWFL*KVILKA
Trigger: TGCCTTCAAAATCACCTTCCACAGGAACCACAGAGA...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSDCLSL*FLWKVI
Trigger: AATCACCTTCCACAGGAACCACAGAGATAAGCAGTC...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCACTGTGGATACACACCTaGCGGCTGGTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKALWIHT*RLVGGG
Trigger: TCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAG...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCACCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: LPFQRWPAGEFACKAGGSPAEPP*LPFQRW
Trigger: CCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGG...TGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTCCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSPAEPP*LPFQRW
Trigger: CCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGG...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCAAATGTACCGCTCCCTaGAGTACAAGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLKCTAP*STSCSS
Trigger: AGAGCTACAGCTTGTACTCCAGGGAGCGGTACATTT...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp ATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGCCGTGGGAGGACTCATaGCTGCTTATCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: MASISTLASGGVCLQSRWPWEDS*LLISVV
Trigger: AACCACAGAGATAAGCAGTCATGAGTCCTCCCACGG...CCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKAGRRML*VPSSWL
Trigger: CAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCC...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp ACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTTTGAACAGAGGCCCTTGACTTaGGGTAGCATGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TLASGGVCLQSRWFIGFEQRPLT*GSMPGE
Trigger: CTCTCCTGGCATGCTACCTCAAGTCAAGGGCCTCTG...TTCAAAACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp TCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATACAGAGGCCCTTGACTTaGGGTAGCATGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SISTLASGGVCLQSRWFIQRPLT*GSMPGE
Trigger: CTCTCCTGGCATGCTACCTCAAGTCAAGGGCCTCTG...TATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp GCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCACAGACGCTTCCCACTaGGCATGTATGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ASISTLASGGVCLQSRWFTDASH*ACMSST
Trigger: AGTGCTGGACATACATGCTCAGTGGGAAGCGTCTGT...GAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR TCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGTGCCGGCTTTACGCTTaGAACCAGAGTTACAAATGT +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLCRLYA*NQSYKC
Trigger: ACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCA...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAAGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PGSKARQAGRWCPWECGEEFHRW*EQFSKS
Trigger: AGACTTGGAAAACTGCTCTCACCACCTATGAAACTC...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCGAGTTTCATAGGTGGTaGGAGCAGTTTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PRHDRQAGGAHGNAENLLEFHRW*EQFSKS
Trigger: AGACTTGGAAAACTGCTCTCACCACCTATGAAACTC...GAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp ACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTTTGAAGCCCGGGACAATAGCTaGTGTTGTGGCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TLASGGVCLQSRWFIGFEARDNS*CCGRCV
Trigger: AACACAGCGGCCACAACAGCAGCTATTGTCCCGGGC...TTCAAAACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR GCA 90 bp ATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTTGTCTGAGAGGGGGTaGCGTGGGAGGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: ISTLASGGVCLQSRWFIGLSERG*RGRTHD
Trigger: GTCATGAGTCCTCCCACGGCACCCCCTCTCAGACAA...ACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR GCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTTGGAGCCCGCTTCCTTaGACCTCTTCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSWSPLP*TSSQSS
Trigger: AGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCA...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGCTGTGTTGTTTGAGCTaGGAGATGAAGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SMASISTLASGGVCLQSRLCCLS*EMKLRA
Trigger: AGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAG...CCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAATCTCTGTGGTTCCTGTaGAAGGTGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGSKARQAGRWCPWECGESLWFL*KVILKA
Trigger: TGCCTTCAAAATCACCTTCCACAGGAACCACAGAGA...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLDCLSL*FLWKVI
Trigger: AATCACCTTCCACAGGAACCACAGAGATAAGCAGTC...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAAGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: PGSKARQAGRWCPWECGEDCLSL*FLWKVI
Trigger: AATCACCTTCCACAGGAACCACAGAGATAAGCAGTC...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCT +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSTVVSL*PCGYTP
Trigger: AGGTGTGTATCCACAGGGCCACAGCGACACCACTGT...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATACTTCCATTTCAACGCTaGCCAGCGGGGGAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SISTLASGGVCLQSRWFILPFQR*PAGEFA
Trigger: GGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG...TATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp TCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCGCCTTTGGTCTCTCCTaGGAAGCTGGGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SLAKAERLLHSGLSWAGFAFGLS*EAGPWV
Trigger: GACCCAGGGCCCAGCTTCCCAGGAGAGACCAAAGGC...GAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAACTGCCGTCGTTACTGTaGAGGGTGGCGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKLPSLL*RVALAF
Trigger: AAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAG...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
CDS-3UTR TCA 90 bp TCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGGTGGTTCATAGGTTTTaGAAAGAGGAGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: SMASISTLASGGVCLQSRVVHRF*KEEGVA
Trigger: GGCAACCCCCTCCTCTTTTCAAAACCTATGAACCAC...CCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR GCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGCCCGGGACAATAGCTaGTGTTGTGGCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKAARDNS*CCGRCV
Trigger: AACACAGCGGCCACAACAGCAGCTATTGTCCCGGGC...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCATTGTCTGAGAGGGGGTaGCGTGGGAGGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKALSERG*RGRTHD
Trigger: GTCATGAGTCCTCCCACGGCACCCCCTCTCAGACAA...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp TCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGAAAAGAGGAGGGGGTTaGCCTCAAATCAACAGACGC +
Preference number: 4 (lower is better)
Translates to: SMASISTLASGGVCLQSRKRGGG*PQINRR
Trigger: GCGTCTGTTGATTTGAGGGCAACCCCCTCCTCTTTT...CCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp ACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTTTGAAACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCT +
Preference number: 4 (lower is better)
Translates to: TLASGGVCLQSRWFIGFETVVSL*PCGYTP
Trigger: AGGTGTGTATCCACAGGGCCACAGCGACACCACTGT...TTCAAAACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp TTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCT +
Preference number: 4 (lower is better)
Translates to: FHFNAGQRGSLPAKQVVHTVVSL*PCGYTP
Trigger: AGGTGTGTATCCACAGGGCCACAGCGACACCACTGT...ATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp CAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTCCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: QSSLAKAERLLHSGLSWAPAEPP*LPFQRW
Trigger: CCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGG...AGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTAGTGGGCGACATTCGTaGCCTTGTTCAACACGCACT +
Preference number: 4 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSSGRHS*PCSTRT
Trigger: AGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACT...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLAKAERLLHSGLSWAGFLGVVQ*ATFVAL
Trigger: CAAGGCCACGAATGTCGCCCACTGGACAACCCCCAG...GAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTCACTCCGGACTTAGCTaGGCTGGTTTCCCCGAGTTT +
Preference number: 4 (lower is better)
Translates to: ISTLASGGVCLQSRWFIGHSGLS*AGFPEF
Trigger: AAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTG...ACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CCA 90 bp TGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGAGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: CTSSQSSLAKAERLLHSGGRWCP*ECGEPA
Trigger: AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC...TCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGTGTGTCTGGACCTCATaGTTGAAGCTTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQCVWTS*LKLSDI
Trigger: AATATCTGAAAGCTTCAACCATGAGGTCCAGACACA...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS-3UTR TCA 90 bp TCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTTCTTGGCTGTTGTCTaGGAGGGGGTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSQSSLAKAERLLHSGLSFLAVV*EGVPWE
Trigger: CTCCCACGGCACCCCCTCTCAGACAACAGCCAAGAA...GCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTTCTTGGCTGTTGTCTaGGAGGGGGTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPCTSSQSSLAKAERLLHFLAVV*EGVPWE
Trigger: CTCCCACGGCACCCCCTCTCAGACAACAGCCAAGAA...GTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTTTCATAACAGACGCTTCCCACTaGGCATGTATGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: QRGSFTPDLAGLVSPSFITDASH*ACMSST
Trigger: AGTGCTGGACATACATGCTCAGTGGGAAGCGTCTGT...TATGAAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR GCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCACTGGTGGGAGGCGGATaGTGTGAGTTCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKALVGGG*CEFPVL
Trigger: AAGAACTGGGAACTCACAGCATCCGCCTCCCACCAG...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTAAATGTACCGCTCCCTaGAGTACAAGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PGELAPGARFLAPLLSRLKCTAP*STSCSS
Trigger: AGAGCTACAGCTTGTACTCCAGGGAGCGGTACATTT...AAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCACACTCCGGACTTAGCTaGGCTGGTTTCCCCGAGTTT +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKAHSGLS*AGFPEF
Trigger: AAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTG...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCCCCGAGTTTCATAGGTGGTGAGAGCAGTTTTCCAAGTCTTCATCTCTGCTGCGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSFIGGESSFPSLHLCCGRWCP*ECGEPA
Trigger: AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC...GCAGCAGAGATGAAGACTTGGAAAACTGCTCTCACCACCTATGAAACTCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR TCA 90 bp CTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACCGGGGGAGTTTGCCTTaGCTTGAGGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPCTSSQSSLAKAERLLHRGSLP*LEVACQ
Trigger: CTGGCATGCTACCTCAAGTCAAGGCAAACTCCCCCG...GTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCACCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKAPSLHL*CWSPKS
Trigger: TGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGG...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTTTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCT +
Preference number: 4 (lower is better)
Translates to: QSSLAKAERLLHSGLSWAFEGIS*EPGTIA
Trigger: AGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAA...AGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: WLPFQRWPAGEFACKAGGDCLSL*FLWKVI
Trigger: AATCACCTTCCACAGGAACCACAGAGATAAGCAGTC...ACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAAGTGGGCGACATTCGTaGCCTTGTTCAACACGCACT +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKASGRHS*PCSTRT
Trigger: AGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACT...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp ACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTCTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: TSSQSSLAKAERLLHSGLLHLCC*SPKSPA
Trigger: TGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG...AAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp GACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACCACATGTATTCCAGGCAGGCCTTTGGTCTCTCCTaGGAAGCTGGGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: DGRFGAGFLFHYHMYSRQAFGLS*EAGPWV
Trigger: GACCCAGGGCCCAGCTTCCCAGGAGAGACCAAAGGC...CTGCCTGGAATACATGTGGTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CCA 90 bp GGGCTGGTTTCCCCGAGTTTCATAGGTGGTGAGAGCAGTTTTCCAAGTCTTCATCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: GLVSPSFIGGESSFPSLHRYCGG*RWPLVN
Trigger: GTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACG...ATGAAGACTTGGAAAACTGCTCTCACCACCTATGAAACTCGGGGAAACCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR TCA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAACAAGCTGTAGCTCTTaGCCCAGATGTCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKATSCSS*PRCLRV
Trigger: AACACGCAGACATCTGGGTCAAGAGCTACAGCTTGT...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTGCCGGCTTTACGCTTaGAACCAGAGTTACAAATGT +
Preference number: 4 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSCRLYA*NQSYKC
Trigger: ACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCA...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp TGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGAGAGTTTGCCTTGACTTaGGGTAGCATGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CTSSQSSLAKAERLLHSGEFALT*GSMPGE
Trigger: CTCTCCTGGCATGCTACCTCAAGTCAAGGCAAACTC...TCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACCTGGTGGGAGGCGGATaGTGTGAGTTCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LPCTSSQSSLAKAERLLHLVGGG*CEFPVL
Trigger: AAGAACTGGGAACTCACAGCATCCGCCTCCCACCAG...GTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR GCA 90 bp CTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACCTTGACCCAGATGTCTaGGTGTTCCACGGACATGGG +
Preference number: 4 (lower is better)
Translates to: LPCTSSQSSLAKAERLLHLDPDV*VFHGHG
Trigger: CCCATGTCCGTGGAACACGCAGACATCTGGGTCAAG...GTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTGTGTTGTTTGAGCTaGGAGATGAAGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: CTSSQSSLAKAERLLHSGLCCLS*EMKLRA
Trigger: AGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAG...TCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp TCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCTTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCT +
Preference number: 4 (lower is better)
Translates to: SLAKAERLLHSGLSWAGFFEGIS*EPGTIA
Trigger: AGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAA...GAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATCTCTGTGGTTCCTGTaGAAGGTGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LPFQRWPAGEFACKAGGSSLWFL*KVILKA
Trigger: TGCCTTCAAAATCACCTTCCACAGGAACCACAGAGA...TGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSDCLSL*FLWKVI
Trigger: AATCACCTTCCACAGGAACCACAGAGATAAGCAGTC...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CCA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACGCGCTCGTCGTGCTCTaGGACCTCCAGTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYALVVL*DLQCAL
Trigger: GAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGC...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR CCA 90 bp ACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTTTGAATCTCTGTGGTTCCTGTaGAAGGTGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TLASGGVCLQSRWFIGFESLWFL*KVILKA
Trigger: TGCCTTCAAAATCACCTTCCACAGGAACCACAGAGA...TTCAAAACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CCA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACGGCAGGTGGTGCCCATaGGAATGCGGAGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYGRWCP*ECGEPA
Trigger: AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp ATTCCAGGCAGCTCACACTGTAATGAAATAAAAATCCTGCTCAGAAGCCTTTGGGCCCGGGACAATAGCTaGTGTTGTGGCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IPGSSHCNEIKILLRSLWARDNS*CCGRCV
Trigger: AACACAGCGGCCACAACAGCAGCTATTGTCCCGGGC...CCAAAGGCTTCTGAGCAGGATTTTTATTTCATTACAGTGTGAGCTGCCTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CCA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACCCACTGCGAAGAGAGTaGGCAAAGTCATCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYPLRRE*AKSSES
Trigger: GCTCTCCGATGACTTTGCCCACTCTCTTCGCAGTGG...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR TCA 90 bp ACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTTGCCGGCTTTACGCTTaGAACCAGAGTTACAAATGT +
Preference number: 4 (lower is better)
Translates to: TSSQSSLAKAERLLHSGLCRLYA*NQSYKC
Trigger: ACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCA...AAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR TCA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACGAGTTTGCCTTGACTTaGGGTAGCATGCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYEFALT*GSMPGE
Trigger: CTCTCCTGGCATGCTACCTCAAGTCAAGGCAAACTC...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR GCA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACCCAAGTCTTCATCTCTaGTGCTGGTCCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYPSLHL*CWSPKS
Trigger: TGACTTGGGGGACCAGCAGCAGAGATGAAGACTTGG...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CCA 90 bp ATTCCAGGCAGCTCACACTGTAATGAAATAAAAATCCTGCTCAGAAGCCTTTGGTTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCT +
Preference number: 4 (lower is better)
Translates to: IPGSSHCNEIKILLRSLWFEGIS*EPGTIA
Trigger: AGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAA...CCAAAGGCTTCTGAGCAGGATTTTTATTTCATTACAGTGTGAGCTGCCTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CCA 90 bp GGTTTTTATTTCATTACCACATGTATTCCAGGCAGCTCACACTGTAATGAAATACTTCATCTCTGCTGCTaGTCCCCCAAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: GFYFITTCIPGSSHCNEILHLCC*SPKSPA
Trigger: TGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG...TATTTCATTACAGTGTGAGCTGCCTGGAATACATGTGGTAATGAAATAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS TCA 90 bp TCTCCCTCCGCGGCCCTGCGCTCGGTTGTGAGCGGCCGGCCTGGGTaGGTGCCCGCGGAGGTGTCGCCGCGGTGCGGAGGCGCGGGCACC +
Preference number: 5 (lower is better)
Translates to: SPSAALRSVVSGRPG*VPAEVSPRCGGAGT
Trigger: GGTGCCCGCGCCTCCGCACCGCGGCGACACCTCCGCGGGCACTCACCCAGGCCGGCCGCTCACAACCGAGCGCAGGGCCGCGGAGGGAGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
CDS CCA 90 bp CTGGTCTCCCTCCGCGGCCCTGCGCTCGGTTGTGAGCGGCCGGCCTaGGTGAGTGCCCGCGGAGGTGTCGCCGCGGTGCGGAGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: LVSLRGPALGCERPA*VSARGGVAAVRRRG
Trigger: CCCGCGCCTCCGCACCGCGGCGACACCTCCGCGGGCACTCACCCAGGCCGGCCGCTCACAACCGAGCGCAGGGCCGCGGAGGGAGACCAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
CDS TCA 90 bp GCCTTCGGCTTTCCTGGTCTCCCTCCGCGGCCCTGCGCTCGGTTGTaGGCGGCCGGCCTGGGTGAGTGCCCGCGGAGGTGTCGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: AFGFPGLPPRPCARL*AAGLGECPRRCRRG
Trigger: ACCGCGGCGACACCTCCGCGGGCACTCACCCAGGCCGGCCGCTCACAACCGAGCGCAGGGCCGCGGAGGGAGACCAGGAAAGCCGAAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
CDS CCA 90 bp TCGCCCGGCGCTGGTCGCCTCCAGCTGCTCCGCCTTCGGCTTTCCTaGTCTCCCTCCGCGGCCCTGCGCTCGGTTGTGAGCGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: SPGAGRLQLLRLRLS*SPSAALRSVVSGRP
Trigger: AGGCCGGCCGCTCACAACCGAGCGCAGGGCCGCGGAGGGAGACCAGGAAAGCCGAAGGCGGAGCAGCTGGAGGCGACCAGCGCCGGGCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS GCA 90 bp GGCTCCACGCAAGCCCGGGAGCCTCCCGGTCCTCCGCGCTCGTCGTaGTCTGGGACCTCCAGTGTGCACTCGGTCCGGTGTCCCCACTGC +
Preference number: 5 (lower is better)
Translates to: GSTQAREPPGPPRSS*SGTSSVHSVRCPHC
Trigger: GCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGGACCGGGAGGCTCCCGGGCTTGCGTGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379974.1
CDS GCA 90 bp ATGCCCACGCAAGCCCGGGAGCCTCCCGGTCCTCCGCGCTCGTCGTaGTCTGGGACCTCCAGTGTGCACTCGGTCCGGTGTCCCCACTGC +
Preference number: 5 (lower is better)
Translates to: MPTQAREPPGPPRSS*SGTSSVHSVRCPHC
Trigger: GCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGGACCGGGAGGCTCCCGGGCTTGCGTGGGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379972.6
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS TCA 90 bp GGCTCCGCGCTCCCGTGGCCAAAACGGGCTTCTCAGAACTGCTCCTaGCCTCGGCCTCGGAGACCCCAGCCAGGCCGCCCGCTCCCTTAC +
Preference number: 5 (lower is better)
Translates to: GSALPWPKRASQNCS*PRPRRPQPGRPLPY
Trigger: GTAAGGGAGCGGGCGGCCTGGCTGGGGTCTCCGAGGCCGAGGTCAGGAGCAGTTCTGAGAAGCCCGTTTTGGCCACGGGAGCGCGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CCA 90 bp CACGCAAGCCCGGGAGCCTCCCGGTCCTCCGCGCTCGTCGTGCTCTaGGACCTCCAGTGTGCACTCGGTCCGGTGTCCCCACTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: HASPGASRSSALVVL*DLQCALGPVSPLRR
Trigger: TCTTCGCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGGACCGGGAGGCTCCCGGGCTTGCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS CCA 90 bp TCCAGGCGCCTGGGAGAAGCGCACTCGCCCGTGTCTCCAAACTGCTaGACGCCGCCGGCTCCGCGCTCCCGTGGCCAAAACGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SRRLGEAHSPVSPNC*TPPAPRSRGQNGLL
Trigger: GAGAAGCCCGTTTTGGCCACGGGAGCGCGGAGCCGGCGGCGTCCAGCAGTTTGGAGACACGGGCGAGTGCGCTTCTCCCAGGCGCCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS GCA 90 bp TCTCCCGGACCCCTCCGAGGACCGCGTGCTATGCAACACCCGCCCTaGAGTCCAGGCGCCTGGGAGAAGCGCACTCGCCCGTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: SPGPLRGPRAMQHPP*SPGAWEKRTRPCLQ
Trigger: TTGGAGACACGGGCGAGTGCGCTTCTCCCAGGCGCCTGGACTGCAGGGCGGGTGTTGCATAGCACGCGGTCCTCGGAGGGGTCCGGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CCA 90 bp TCCAGCCCTCTCTGCGGCTCGGATCCACTTGACCTCGCCCGGCGCTaGTCGCCTCCAGCTGCTCCGCCTTCGGCTTTCCTGGTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SSPLCGSDPLDLARR*SPPAAPPSAFLVSL
Trigger: GAGGGAGACCAGGAAAGCCGAAGGCGGAGCAGCTGGAGGCGACCAGCGCCGGGCGAGGTCAAGTGGATCCGAGCCGCAGAGAGGGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS-3UTR CAA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCRGLVS*LLEPAS
Trigger: GGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCT...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGGGTGGCGCTGGCCTTaGGTGAACCAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GGADPAVREILLGLLRGLGWRWP*VNQGRV
Trigger: GACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCC...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS GCA 90 bp GGAGTCGGGAGGAGTAGTTTCTCCCGGACCCCTCCGAGGACCGCGTaGTATGCAACACCCGCCCTGCAGTCCAGGCGCCTGGGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: GVGRSSFSRTPPRTA*YATPALQSRRLGEA
Trigger: CGCTTCTCCCAGGCGCCTGGACTGCAGGGCGGGTGTTGCATAGCACGCGGTCCTCGGAGGGGTCCGGGAGAAACTACTCCTCCCGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS-3UTR CAA 90 bp CCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGCCCAGTTCTTGGCTGTaGTCTGAGAGGGGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: PMGMRRTCSLAQEAPTRQPSSWL*SERGCR
Trigger: ACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGG...CTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACAGCCAGCCTGTCTCTaGCATCCCGCGTCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: PGSKARQAGRWCPWECGEQPACL*HPASPA
Trigger: CGCCGGCGACGCGGGATGCAAGAGACAGGCTGGCTG...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS GCA 90 bp AGCCTCCCGGTCCTCCGCGCTCGTCGTGCTCTGGGACCTCCAGTGTaGACTCGGTCCGGTGTCCCCACTGCGAAGAGAGTGGGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: SLPVLRARRALGPPV*TRSGVPTAKRVGKV
Trigger: GACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGGACCGGGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS-3UTR CAA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCCCAGTTCTTGGCTGTaGTCTGAGAGGGGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTPSSWL*SERGCR
Trigger: ACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGG...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp AGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCCCCAGTTCTTGGCTGTaGTCTGAGAGGGGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: RTCSLAQEAPTRQSVRSCPSSWL*SERGCR
Trigger: ACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGG...GCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTGCGGCTCGGATCCACTaGACCTCGCCCGGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: SKARQAGRWCPWECGEPAAARIH*TSPGAG
Trigger: ACCAGCGCCGGGCGAGGTCAAGTGGATCCGAGCCGC...AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525219.6
CDS-3UTR CAA 90 bp CATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGTCCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: HGNAENLLPRAGGADPAVLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...GACTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: ARQAGRWCPWECGEPAPSRGLVS*LLEPAS
Trigger: GGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCT...CGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp ACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGGCCAGCGGGGGAGTTaGCCTGCAAAGCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: TGRQVVPMGMRRTCSLAQGQRGS*PAKQVV
Trigger: AACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCC...CTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CAA 90 bp GGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACGCGACATTCGTGGCCTaGTTCAACACGCACTCCGTC +
Preference number: 5 (lower is better)
Translates to: GGAHGNAENLLPRAGGADATFVA*FNTHSV
Trigger: GACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGC...GTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCGCGACATTCGTGGCCTaGTTCAACACGCACTCCGTC +
Preference number: 5 (lower is better)
Translates to: GRWCPWECGEPAPSRRRRATFVA*FNTHSV
Trigger: GACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGC...GCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: GPRHDRQAGGAHGNAENLRGLVS*LLEPAS
Trigger: GGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCT...CAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGCTGCTTGCTGCCTGCTaGTCCGATGGTGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRLLAAC*SDGGGT
Trigger: AGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAG...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS TCA 90 bp GGCCCTGTGGATACACACCTGGCGGCTGGTGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTGTTGTCTGAGAGGGGGTGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: GPVDTHLAAGGRRML*VPSSWLLSERGCRG
Trigger: CCCACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTATCCACAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 21 transcripts:
ENST00000379971.5
ENST00000379972.6
ENST00000379974.1
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397250.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000435171.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS GCA 90 bp TTCAGATATTCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTTaGATCCACGCAAGCCCGGGAGCCTCCCGGTCCTCCGCGCTCGTC +
Preference number: 5 (lower is better)
Translates to: FRYSAPSRQDSQPVS*IHASPGASRSSALV
Trigger: GACGAGCGCGGAGGACCGGGAGGCTCCCGGGCTTGCGTGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGAATATCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS-3UTR CAA 90 bp CCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGGCAGGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: PMGMRRTCSLAQEAPTRQVVAAV*FELGDE
Trigger: TTCATCTCCCAGCTCAAACAACACAGCGGCCACAAC...CTGCCGGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGCCTGCTCAGAAGCCTTaGGTCTCTCCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GGADPAVREILLGLLRGLPAQKP*VSPGKL
Trigger: CAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGG...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp CGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCCCTGCTCAGAAGCCTTaGGTCTCTCCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RQAGRWCPWECGEPAPSRPAQKP*VSPGKL
Trigger: CAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGG...GCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GAGAGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTGGGTGGCGCTGGCCTTaGGTGAACCAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ERPGELAPGARFLAPLLSGWRWP*VNQGRV
Trigger: GACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCC...ACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CAA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCGCGGGCTTAATGCATTaGAGACTGGGGGTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTAGLMH*RLGVVQ
Trigger: CTGGACAACCCCCAGTCTCAAATGCATTAAGCCCGC...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528354.5
CDS-3UTR CAA 90 bp GGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGTGGCCGCTGTGTTGTTaGAGCTGGGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GGADPAVREILLGLLRGLWPLCC*SWEMKL
Trigger: CAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCA...CAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCCGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: WCPWECGEPAPSRRRRRPVVAAV*FELGDE
Trigger: TTCATCTCCCAGCTCAAACAACACAGCGGCCACAAC...GGGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCGCGACATTCGTGGCCTaGTTCAACACGCACTCCGTC +
Preference number: 5 (lower is better)
Translates to: ADPAVREILLGLLRGLVSATFVA*FNTHSV
Trigger: GACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGC...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGACCGGGTCTCTAATGCATTaGAGACTGGGGGTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: VVPMGMRRTCSLAQEAPTGSLMH*RLGVVQ
Trigger: CTGGACAACCCCCAGTCTCAAATGCATTAGAGACCC...GGTCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS CCA 90 bp GACCTCCAGTGTGCACTCGGTCCGGTGTCCCCACTGCGAAGAGAGTaGGCAAAGTCATCGGAGAGCAGACTCTCTCCAGCCCTCTCTGCG +
Preference number: 5 (lower is better)
Translates to: DLQCALGPVSPLRRE*AKSSESRLSPALSA
Trigger: CGCAGAGAGGGCTGGAGAGAGTCTGCTCTCCGATGACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS-3UTR CAA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCAGAAGCCTTaGGTCTCTCCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PGSKARQAGRWCPWECGEPAQKP*VSPGKL
Trigger: CAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGG...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp AGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGAGGCGCCGAGGGTCTCTAATGCATTaGAGACTGGGGGTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RWCPWECGEPAPSRRRRRGSLMH*RLGVVQ
Trigger: CTGGACAACCCCCAGTCTCAAATGCATTAGAGACCC...TCGGCGCCTCCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS GCA 90 bp TCGTGCTCTGGGACCTCCAGTGTGCACTCGGTCCGGTGTCCCCACTaGGAAGAGAGTGGGCAAAGTCATCGGAGAGCAGACTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SCSGTSSVHSVRCPH*EESGQSHRRADSLQ
Trigger: CTGGAGAGAGTCTGCTCTCCGATGACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS CCA 90 bp GCTCTCTGGCTGTGGGGTCACCCCTGCCGTCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAACCAGGGCAGGGTCTCTAATGCATTT +
Preference number: 5 (lower is better)
Translates to: ALWLWGHPCRRYCGG*RWPLVNQGRVSNAF
Trigger: AAATGCATTAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAGCCAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 90 bp TGGCTGTGGGGTCACCCCTGCCGTCGTTACTGTGGAGGGTGGCGCTaGCCTTTGGTGAACCAGGGCAGGGTTAATGCATTTGAGACTGGG +
Preference number: 5 (lower is better)
Translates to: WLWGHPCRRYCGGWR*PLVNQGRVNAFETG
Trigger: CCCAGTCTCAAATGCATTAACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CCA 90 bp GCTCTCTGGCTGTGGGGTCACCCCTGCCGTCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAACCAGGGCAGGGTTAATGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: ALWLWGHPCRRYCGG*RWPLVNQGRVNAFE
Trigger: CTCAAATGCATTAACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAGCCAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS-3UTR CAA 90 bp CACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCCTGTGGAAGGTGATTTaGAAGGCATCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: HDRQAGGAHGNAENLLPRLWKVI*KASAGS
Trigger: GCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAG...GCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGGGCCAGCGGGGGAGTTaGCCTGCAAAGCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SMASISTLASGGVCLQSRGQRGS*PAKQVV
Trigger: AACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCC...CCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CAA 90 bp AGGCCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: RPGELAPGARFLAPLLSRLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...ACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS CCA 90 bp CTTCATCTCTGCTGCTGGTCCCCCAAGTCACCGGCAGAGCCTCCATaGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTTGACT +
Preference number: 5 (lower is better)
Translates to: LHLCCWSPKSPAEPP*LPFQRWPAGEFALT
Trigger: AGTCAAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCTGCCGGTGACTTGGGGGACCAGCAGCAGAGATGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000379977.8
ENST00000397248.6
ENST00000397250.6
ENST00000525219.6
ENST00000528354.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
CDS CCA 90 bp TGGCTGTGGGGTCACCCCTGCCGTCGTTACTGTGGAGGGTGGCGCTaGCCTTTGGTGAACCAGGGCAGGGTCTCTAATGCATTTGAGACT +
Preference number: 5 (lower is better)
Translates to: WLWGHPCRRYCGGWR*PLVNQGRVSNAFET
Trigger: AGTCTCAAATGCATTAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 90 bp CTCTACCTGCCTGCTTGCTGCCTGCTTGTCCGATGGTGGTGGCACTaGGGGCAGTTTTCCATTGTCCTGAGTCTCACGCAGGCCTCGTGT +
Preference number: 5 (lower is better)
Translates to: LYLPACCLLVRWWWH*GQFSIVLSLTQASC
Trigger: ACACGAGGCCTGCGTGAGACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 90 bp GTCCTTCTCTACCTGCCTGCTTGCTGCCTGCTTGTCCGATGGTGGTaGCACTGGGGGCAGTTTTCCATTGTCCTGAGTCTCACGCAGGCC +
Preference number: 5 (lower is better)
Translates to: VLLYLPACCLLVRWW*HWGQFSIVLSLTQA
Trigger: GGCCTGCGTGAGACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS-3UTR CAA 90 bp AAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCCTGTGGAAGGTGATTTaGAAGGCATCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: KARQAGRWCPWECGEPAPLWKVI*KASAGS
Trigger: GCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAG...GGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp AGAGCCTCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAACCCAGTTCTTGGCTGTaGTCTGAGAGGGGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: RASMASISTLASGGVCLQPSSWL*SERGCR
Trigger: ACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGG...TTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CAA 90 bp CAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTCCCTCGCGCAGGGTGCCGGCTTTACGCTaGAAACCAGAGTTACAAATG +
Preference number: 5 (lower is better)
Translates to: QAGRWCPWECGEPAPSRRVPALR*KPELQM
Trigger: CATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCAC...CCTGCGCGAGGGAGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp CCTGGTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTCTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: PGELAPGARFLAPLLSRLLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...AAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp CCTGGGTCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAAGGGTCTCTAATGCATTaGAGACTGGGGGTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: PGSKARQAGRWCPWECGEGSLMH*RLGVVQ
Trigger: CTGGACAACCCCCAGTCTCAAATGCATTAGAGACCC...TTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CAA 90 bp TCCAAGGCACGACAGGCAGGCAGGTGGTGCCCATGGGAATGCGGAGAACCTGCTGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: SKARQAGRWCPWECGEPAVVAAV*FELGDE
Trigger: TTCATCTCCCAGCTCAAACAACACAGCGGCCACAAC...AGCAGGTTCTCCGCATTCCCATGGGCACCACCTGCCTGCCTGTCGTGCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCCTGGTGAGCGTGCCGGCTTTACGCTaGAAACCAGAGTTACAAATG +
Preference number: 5 (lower is better)
Translates to: ADPAVREILLGLLRGLVSVPALR*KPELQM
Trigger: CATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCAC...GCTCACCAGGCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKARGLVS*LLEPAS
Trigger: GGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCT...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GAGCCTCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAACCTGCTCAGAAGCCTTaGGTCTCTCCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EPPWLPFQRWPAGEFACKPAQKP*VSPGKL
Trigger: CAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGG...TTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CAA 90 bp GCAGGAGGCGCCGACCCGGCAGTCCGTGAGATCCTGCTGGGACTTCTGAGAGGCGTCTGGACCTCATGGTaGAAGCTTTCAGATATTCTG +
Preference number: 5 (lower is better)
Translates to: AGGADPAVREILLGLLRGVWTSW*KLSDIL
Trigger: CAGAATATCTGAAAGCTTCAACCATGAGGTCCAGAC...GCCTCTCAGAAGTCCCAGCAGGATCTCACGGACTGCCGGGTCGGCGCCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS CCA 90 bp ACCAGGGCAGGGTCTCTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCCGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TRAGSLMHLRLGVVQ*ATFVALFNTHSVRL
Trigger: CAGCCTGACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAGAGACCCTGCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 90 bp TCTGTCCTTCTCTACCTGCCTGCTTGCTGCCTGCTTGTCCGATGGTaGTGGCACTGGGGGCAGTTTTCCATTGTCCTGAGTCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: SVLLYLPACCLLVRW*WHWGQFSIVLSLTQ
Trigger: CTGCGTGAGACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS-3UTR CAA 90 bp TCCATGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGCCGCTGTGTTGTTaGAGCTGGGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SMASISTLASGGVCLQSRWPLCC*SWEMKL
Trigger: CAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCA...CCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CAA 90 bp CTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACGGGTGGCGCTGGCCTTaGGTGAACCAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LPCTSSQSSLAKAERLLHGWRWP*VNQGRV
Trigger: GACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCC...GTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS GCA 90 bp CTCCACACTGATCTTCTGTCCTTCTCTACCTGCCTGCTTGCTGCCTaGTTGTCCGATGGTGGTGGCACTGGGGGCAGTTTTCCATTGTCC +
Preference number: 5 (lower is better)
Translates to: LHTDLLSFSTCLLAA*LSDGGGTGGSFPLS
Trigger: GGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGACAGAAGATCAGTGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS GCA 90 bp TCCATGTTCTGCTCCACACTGATCTTCTGTCCTTCTCTACCTGCCTaGTTGCTGCCTGCTTGTCCGATGGTGGTGGCACTGGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SMFCSTLIFCPSLPA*LLPACPMVVALGAV
Trigger: AACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGACAGAAGATCAGTGTGGAGCAGAACATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS GCA 90 bp TTTCTCCATGTTCTGCTCCACACTGATCTTCTGTCCTTCTCTACCTaGCTGCTTGCTGCCTGCTTGTCCGATGGTGGTGGCACTGGGGGC +
Preference number: 5 (lower is better)
Translates to: FLHVLLHTDLLSFST*LLAACLSDGGGTGG
Trigger: GCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGACAGAAGATCAGTGTGGAGCAGAACATGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS GCA 90 bp TGCCTGCAGAGCCCCACTGGCTTTGAGGCCTCTGGTGCTATCTGGTaGTGGAGTGTCAGAGGCTTTTTCTCCATGTTCTGCTCCACACTG +
Preference number: 5 (lower is better)
Translates to: CLQSPTGFEASGAIW*WSVRGFFSMFCSTL
Trigger: CAGTGTGGAGCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACCAGATAGCACCAGAGGCCTCAAAGCCAGTGGGGCTCTGCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 90 bp TCTGAGAGGGGGTGCCGTGGGAGGACTCATGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATTTTGAAGGCATCAGCTGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: SERGCRGRTHDCLSL*FLWKVILKASAGSP
Trigger: CGGGCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAGGAACCACAGAGATAAGCAGTCATGAGTCCTCCCACGGCACCCCCTCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 20 transcripts:
ENST00000379971.5
ENST00000379974.1
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397250.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000435171.6
ENST00000447291.5
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 90 bp TCTTCTGTCCTTCTCTACCTGCCTGCTTGCTGCCTGCTTGTCCGATaGTGGTGGCACTGGGGGCAGTTTTCCATTGTCCTGAGTCTCACG +
Preference number: 5 (lower is better)
Translates to: SSVLLYLPACCLLVR*WWHWGQFSIVLSLT
Trigger: CGTGAGACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGACAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 90 bp GATGAAGCTGCGGGCTTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCCGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: DEAAGLMHLRLGVVQ*ATFVALFNTHSVRL
Trigger: CAGCCTGACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAAGCCCGCAGCTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397246.7
ENST00000429135.2
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
CDS-3UTR CAA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTGGCCGCTGTGTTGTTaGAGCTGGGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSWPLCC*SWEMKL
Trigger: CAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCA...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TGGCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: WLPFQRWPAGEFACKAGGVVAAV*FELGDE
Trigger: TTCATCTCCCAGCTCAAACAACACAGCGGCCACAAC...ACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CAA 90 bp GCTTCCATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCCTGTGGAAGGTGATTTaGAAGGCATCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: ASISTLASGGVCLQSRWFLWKVI*KASAGS
Trigger: GCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAG...GAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAATGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CAA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAACTGGAGCCCGCTTCCTaGCACCTCTTCTCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKLEPAS*HLFSVV
Trigger: GACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAG...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp ACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGAGGCCTGGTGAGCTaGCTCCTGGAGCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: TSSQSSLAKAERLLHSGLRGLVS*LLEPAS
Trigger: GGAAGCGGGCTCCAGGAGCAAGCTCACCAGGCCTCT...AAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGCACGTGATGCCTGCTaGCTGCCTGCTTGTCCGATG +
Preference number: 5 (lower is better)
Translates to: CSWSPLPCTSSQSSLAKAARDAC*LPACPM
Trigger: CATCGGACAAGCAGGCAGCAAGCAGGCATCACGTGC...TGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397248.6
CDS CCA 90 bp CTGCAGAGCCCCACTGGCTTTGAGGCCTCTGGTGCTATCTGGTGCTaGAGTGTCAGAGGCTTTTTCTCCATGTTCTGCTCCACACTGATC +
Preference number: 5 (lower is better)
Translates to: LQSPTGFEASGAIWC*SVRGFFSMFCSTLI
Trigger: GATCAGTGTGGAGCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACCAGATAGCACCAGAGGCCTCAAAGCCAGTGGGGCTCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS-3UTR CAA 90 bp ATTTCAACGCTGGCCAGCGGGGGAGTTTGCCTGCAAAGCAGGTGGTTCATAGGTTGGCCGCTGTGTTGTTaGAGCTGGGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ISTLASGGVCLQSRWFIGWPLCC*SWEMKL
Trigger: CAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCA...ACCTATGAACCACCTGCTTTGCAGGCAAACTCCCCCGCTGGCCAGCGTTGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS-3UTR CAA 90 bp CTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTCTGTGGAAGGTGATTTaGAAGGCATCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LKQRGSFTPDLAGLVSPSLWKVI*KASAGS
Trigger: GCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAG...ACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCCTGTGGAAGGTGATTTaGAAGGCATCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSLWKVI*KASAGS
Trigger: GCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAG...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACCCAGTTCTTGGCTGTaGTCTGAGAGGGGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: CTSSQSSLAKAERLLHSGPSSWL*SERGCR
Trigger: ACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGG...TCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCGACATTCGTGGCCTaGTTCAACACGCACTCCGTC +
Preference number: 5 (lower is better)
Translates to: ACSWSPLPCTSSQSSLAKATFVA*FNTHSV
Trigger: GACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGC...TTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp CAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCCCGAGTTTCATAGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: QRGSFTPDLAGLVSPSFIVVAAV*FELGDE
Trigger: TTCATCTCCCAGCTCAAACAACACAGCGGCCACAAC...TATGAAACTCGGGGAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447291.5
CDS-3UTR CAA 90 bp CTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACCCCAGTTCTTGGCTGTaGTCTGAGAGGGGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: LPCTSSQSSLAKAERLLHPSSWL*SERGCR
Trigger: ACGGCACCCCCTCTCAGACAACAGCCAAGAACTGGG...GTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS TCA 90 bp TGTTCAACACGCACTCCGTCAGGCTGGACGTGCCGGCTTTACGCTTaGAACCAGAGTTACAAATGTACCGCTCCCTGGAGTACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: CSTRTPSGWTCRLYA*NQSYKCTAPWSTSC
Trigger: ACAGCTTGTACTCCAGGGAGCGGTACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCGTGTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS TCA 90 bp GGTGCTGGAGTGTCAGAGGCTTTTTCTCCATGTTCTGCTCCACACTaGTCTTCTGTCCTTCTCTACCTGCCTGCTTGCTGCCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: GAGVSEAFSPCSAPH*SSVLLYLPACCLLV
Trigger: GACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAGGACAGAAGATCAGTGTGGAGCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 90 bp CTTATCTCTGTGGTTCTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCCGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LISVVLMHLRLGVVQ*ATFVALFNTHSVRL
Trigger: CAGCCTGACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAGAACCACAGAGATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379972.6
ENST00000532039.5
CDS-3UTR CAA 90 bp GTGAGCTTGCTCCTGGAGCCCGCTTCCTTGCACCTCTTCTCAGTCGTCTTTAGCGTGCCGGCTTTACGCTaGAAACCAGAGTTACAAATG +
Preference number: 5 (lower is better)
Translates to: VSLLLEPASLHLFSVVFSVPALR*KPELQM
Trigger: CATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCAC...GCTAAAGACGACTGAGAAGAGGTGCAAGGAAGCGGGCTCCAGGAGCAAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
ENST00000528354.5
CDS GCA 90 bp GGTGCTATCTGGTGCTGGAGTGTCAGAGGCTTTTTCTCCATGTTCTaGTCCACACTGATCTTCTGTCCTTCTCTACCTGCCTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GAIWCWSVRGFFSMF*STLIFCPSLPACLL
Trigger: CAGCAAGCAGGCAGGTAGAGAAGGACAGAAGATCAGTGTGGAGCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACCAGATAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS-3UTR CAA 90 bp TGCACCTCTTCTCAGTCGTCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGAGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: CTSSQSSLAKAERLLHSGVVAAV*FELGDE
Trigger: TTCATCTCCCAGCTCAAACAACACAGCGGCCACAAC...TCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGACGACTGAGAAGAGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp TCTTTAGCTAAAGCAGAGAGGCTCCTTCACTCCGGACTTAGCTGGGCTGGTTTCCTGTGGAAGGTGATTTaGAAGGCATCAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SLAKAERLLHSGLSWAGFLWKVI*KASAGS
Trigger: GCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAG...GAAACCAGCCCAGCTAAGTCCGGAGTGAAGGAGCCTCTCTGCTTTAGCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
CDS-3UTR CAA 90 bp GACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACCACATGTATTCCAGGCAGTGGCCGCTGTGTTGTTaGAGCTGGGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: DGRFGAGFLFHYHMYSRQWPLCC*SWEMKL
Trigger: CAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCA...CTGCCTGGAATACATGTGGTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CAA 90 bp CTGAAAGTTAGGATGAGGGACGGAAGATTCGGGGCAGGGTTTTTATTTCATTACGTGCCGGCTTTACGCTaGAAACCAGAGTTACAAATG +
Preference number: 5 (lower is better)
Translates to: LKVRMRDGRFGAGFLFHYVPALR*KPELQM
Trigger: CATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCAC...GTAATGAAATAAAAACCCTGCCCCGAATCTTCCGTCCCTCATCCTAACTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS-3UTR CAA 90 bp GGTTTTTATTTCATTACCACATGTATTCCAGGCAGCTCACACTGTAATGAAATACCTGCTCAGAAGCCTTaGGTCTCTCCTGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GFYFITTCIPGSSHCNEIPAQKP*VSPGKL
Trigger: CAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGG...TATTTCATTACAGTGTGAGCTGCCTGGAATACATGTGGTAATGAAATAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000525219.6
CDS CCA 90 bp TTATCCTCTATATGTTTATTTATACAGTCTCTCTGGAAGGATGCCTaGAAATCTGGTAGCAAGTGTTGCTTCCTTCCAGTGGTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: LSSICLFIQSLWKDA*KSGSKCCFLPVVSL
Trigger: CAGCGACACCACTGGAAGGAAGCAACACTTGCTACCAGATTTCCAGGCATCCTTCCAGAGAGACTGTATAAATAAACATATAGAGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532039.5
ENST00000620865.4
CDS CCA 90 bp GTCCAGCATTCCTTATCCTCTATATGTTTATTTATACAGTCTCTCTaGAAGGATGCCTGGAAATCTGGTAGCAAGTGTTGCTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: VQHSLSSICLFIQSL*KDAWKSGSKCCFLP
Trigger: TGGAAGGAAGCAACACTTGCTACCAGATTTCCAGGCATCCTTCCAGAGAGACTGTATAAATAAACATATAGAGGATAAGGAATGCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532039.5
ENST00000620865.4
CDS TCA 72 bp GCGGCCCTGCGCTCGGTTGTGAGCGGCCGGCCTGGGTaGGTGCCCGCGGAGGTGTCGCCGCGGTGCGGAGGC +
Preference number: 6 (lower is better)
Translates to: AALRSVVSGRPG*VPAEVSPRCGG
Trigger: GCCTCCGCACCGCGGCGACACCTCCGCGGGCACTCACCCAGGCCGGCCGCTCACAACCGAGCGCAGGGCCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
CDS CCA 72 bp CTCCGCGGCCCTGCGCTCGGTTGTGAGCGGCCGGCCTaGGTGAGTGCCCGCGGAGGTGTCGCCGCGGTGCGG +
Preference number: 6 (lower is better)
Translates to: LRGPALGCERPA*VSARGGVAAVR
Trigger: CCGCACCGCGGCGACACCTCCGCGGGCACTCACCCAGGCCGGCCGCTCACAACCGAGCGCAGGGCCGCGGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
CDS CCA 72 bp CTCGGAGACCCCAGCCAGGCCGCCCGCTCCCTTACGTaGGTGACCCGGGCGCAGCGGCGGCGCTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: LGDPSQAARSLT*VTRAQRRRSPC
Trigger: GCAGGGAGAGCGCCGCCGCTGCGCCCGGGTCACCCACGTAAGGGAGCGGGCGGCCTGGCTGGGGTCTCCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS GCA 72 bp CCCCTCCGAGGACCGCGTGCTATGCAACACCCGCCCTaGAGTCCAGGCGCCTGGGAGAAGCGCACTCGCCCG +
Preference number: 6 (lower is better)
Translates to: PLRGPRAMQHPP*SPGAWEKRTRP
Trigger: CGGGCGAGTGCGCTTCTCCCAGGCGCCTGGACTGCAGGGCGGGTGTTGCATAGCACGCGGTCCTCGGAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CCA 72 bp CCGGGAGCCTCCCGGTCCTCCGCGCTCGTCGTGCTCTaGGACCTCCAGTGTGCACTCGGTCCGGTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: PGASRSSALVVL*DLQCALGPVSP
Trigger: TGGGGACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGGACCGGGAGGCTCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS GCA 72 bp CAAGCCCGGGAGCCTCCCGGTCCTCCGCGCTCGTCGTaGTCTGGGACCTCCAGTGTGCACTCGGTCCGGTGT +
Preference number: 6 (lower is better)
Translates to: QAREPPGPPRSS*SGTSSVHSVRC
Trigger: ACACCGGACCGAGTGCACACTGGAGGTCCCAGAGCACGACGAGCGCGGAGGACCGGGAGGCTCCCGGGCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS GCA 72 bp TCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTTaGATCCCGCGTCGCCGGCGGCCGGAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SAPSRQDSQPVS*IPRRRRPEQQQ
Trigger: CTGCTGCTGCTCCGGCCGCCGGCGACGCGGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS TCA 72 bp GACTCTCTCCAGCCCTCTCTGCGGCTCGGATCCACTTaGCCTCGCCCGGCGCTGGTCGCCTCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: DSLQPSLRLGST*PRPALVASSCS
Trigger: GGAGCAGCTGGAGGCGACCAGCGCCGGGCGAGGTCAAGTGGATCCGAGCCGCAGAGAGGGCTGGAGAGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS TCA 72 bp CTCCCGTGGCCAAAACGGGCTTCTCAGAACTGCTCCTaGCCTCGGCCTCGGAGACCCCAGCCAGGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: LPWPKRASQNCS*PRPRRPQPGRP
Trigger: CGGGCGGCCTGGCTGGGGTCTCCGAGGCCGAGGTCAGGAGCAGTTCTGAGAAGCCCGTTTTGGCCACGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CCA 72 bp CTGGGAGAAGCGCACTCGCCCGTGTCTCCAAACTGCTaGACGCCGCCGGCTCCGCGCTCCCGTGGCCAAAAC +
Preference number: 6 (lower is better)
Translates to: LGEAHSPVSPNC*TPPAPRSRGQN
Trigger: GTTTTGGCCACGGGAGCGCGGAGCCGGCGGCGTCCAGCAGTTTGGAGACACGGGCGAGTGCGCTTCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CAA 72 bp TTCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTaGCATCCCGCGTCGCCGGCGGCCGGAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: FCSFPPGQPACL*HPASPAAGAAA
Trigger: TGCTGCTGCTCCGGCCGCCGGCGACGCGGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS GCA 72 bp TCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTTaGATCCACGCAAGCCCGGGAGCCTCCCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SAPSRQDSQPVS*IHASPGASRSS
Trigger: GGAGGACCGGGAGGCTCCCGGGCTTGCGTGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CAA 72 bp AGACTCTCTCCAGCCCTCTCTGCGGCTCGGATCCACTaGACCTCGCCCGGCGCTGGTCGCCTCCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RLSPALSAARIH*TSPGAGRLQLL
Trigger: GAGCAGCTGGAGGCGACCAGCGCCGGGCGAGGTCAAGTGGATCCGAGCCGCAGAGAGGGCTGGAGAGAGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS GCA 72 bp AGGAGTAGTTTCTCCCGGACCCCTCCGAGGACCGCGTaGTATGCAACACCCGCCCTGCAGTCCAGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: RSSFSRTPPRTA*YATPALQSRRL
Trigger: CAGGCGCCTGGACTGCAGGGCGGGTGTTGCATAGCACGCGGTCCTCGGAGGGGTCCGGGAGAAACTACTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CAA 72 bp TTCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTaGCATCCACGCAAGCCCGGGAGCCTCCCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: FCSFPPGQPACL*HPRKPGSLPVL
Trigger: GAGGACCGGGAGGCTCCCGGGCTTGCGTGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS TCA 72 bp CATACGTGGCTGGCCTGTCTGGAGCTGCCTGGGTGCTaGTGCCCTGGGCATCTGGCCGGCACCTTCTACCAG +
Preference number: 6 (lower is better)
Translates to: HTWLACLELPGC*CPGHLAGTFYQ
Trigger: CTGGTAGAAGGTGCCGGCCAGATGCCCAGGGCATCAGCACCCAGGCAGCTCCAGACAGGCCAGCCACGTATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622442.4
CDS GCA 72 bp CTCCCAGGCATTCCTTCCTCCCCTGCTCATGTTCGGTaGCTCAGCGTCGCCGGGCAGGCTTCTCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LPGIPSSPAHVR*LSVAGQASLGQ
Trigger: CTGGCCAAGAGAAGCCTGCCCGGCGACGCTGAGGCACCGAACATGAGCAGGGGAGGAAGGAATGCCTGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620345.4
CDS CCA 72 bp CTGTGGGGTCACCCCTGCCGTCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAACCAGGGCAGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LWGHPCRRYCGG*RWPLVNQGRVS
Trigger: AGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp TCTCTGGCTGTGGGGTCACCCCTGCCGTCGTTACTGTaGAGGGTGGCGCTGGCCTTTGGTGAACCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SLAVGSPLPSLL*RVALAFGEPGQ
Trigger: CTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAGCCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000453922.1
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp CGTGCTATGCAACACCCGCCCTGCAGTCCAGGCGCCTaGGAGAAGCGCACTCGCCCGTGTCTCCAAACTGCT +
Preference number: 6 (lower is better)
Translates to: RAMQHPPCSPGA*EKRTRPCLQTA
Trigger: AGCAGTTTGGAGACACGGGCGAGTGCGCTTCTCCCAGGCGCCTGGACTGCAGGGCGGGTGTTGCATAGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CAA 90 bp ATCAGCTGGGAGCCCGGGACAATAGCTGCTGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAAGCTGCGGGCTCCCGCGTCGCCGGC +
Preference number: 6 (lower is better)
Translates to: ISWEPGTIAAVVAAV*FELGDEAAGSRVAG
Trigger: GCCGGCGACGCGGGAGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCACAACAGCAGCTATTGTCCCGGGCTCCCAGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000397250.6
CDS CAA 90 bp TTTCAGATATTCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTaGCATCCACGCAAGCCCGGGAGCCTCCCGGTCCTCCGCGCTCGT +
Preference number: 6 (lower is better)
Translates to: FQIFCSFPPGQPACL*HPRKPGSLPVLRAR
Trigger: ACGAGCGCGGAGGACCGGGAGGCTCCCGGGCTTGCGTGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGAATATCTGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CAA 90 bp TTTCAGATATTCTGCTCCTTCCCGCCAGGACAGCCAGCCTGTCTCTaGCATCCCGCGTCGCCGGCGGCCGGAGCAGCAGCAGCAGTAGCA +
Preference number: 6 (lower is better)
Translates to: FQIFCSFPPGQPACL*HPASPAAGAAAAVA
Trigger: TGCTACTGCTGCTGCTGCTCCGGCCGCCGGCGACGCGGGATGCAAGAGACAGGCTGGCTGTCCTGGCGGGAAGGAGCAGAATATCTGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CAA 90 bp ATCAGCTGGGAGCCCGGGACAATAGCTGCTGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAAGCTGCGGGCTCCACGCAAGCCCGG +
Preference number: 6 (lower is better)
Translates to: ISWEPGTIAAVVAAV*FELGDEAAGSTQAR
Trigger: CCGGGCTTGCGTGGAGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCACAACAGCAGCTATTGTCCCGGGCTCCCAGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379974.1
CDS TCA 72 bp CCTGGGCATCTGGCCGGCACCTTCTACCAGGGCTGGTaGAATGTCCCTCCGGAGGAGCAGCAGCTCTTTAGG +
Preference number: 6 (lower is better)
Translates to: PGHLAGTFYQGW*NVPPEEQQLFR
Trigger: CCTAAAGAGCTGCTGCTCCTCCGGAGGGACATTTCACCAGCCCTGGTAGAAGGTGCCGGCCAGATGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622442.4
CDS GCA 72 bp GGGACCTCCAGTGTGCACTCGGTCCGGTGTCCCCACTaGGAAGAGAGTGGGCAAAGTCATCGGAGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: GTSSVHSVRCPH*EESGQSHRRAD
Trigger: GTCTGCTCTCCGATGACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGACCGAGTGCACACTGGAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS CCA 72 bp ACAGTGGACGTGGAGATAGCCACAGTGGTGTCGCTGTaGCCCTGTGGATACACACCTGGCGGCTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: TVDVEIATVVSL*PCGYTPGGWWE
Trigger: CTCCCACCAGCCGCCAGGTGTGTATCCACAGGGCCACAGCGACACCACTGTGGCTATCTCCACGTCCACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000379971.5
ENST00000379972.6
ENST00000379974.1
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397250.6
ENST00000397251.7
ENST00000397255.7
ENST00000435171.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000622442.4
CDS CCA 72 bp GGTCACCCCTGCCGTCGTTACTGTGGAGGGTGGCGCTaGCCTTTGGTGAACCAGGGCAGGGTCTCTAATGCA +
Preference number: 6 (lower is better)
Translates to: GHPCRRYCGGWR*PLVNQGRVSNA
Trigger: TGCATTAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp CTGTGGGGTCACCCCTGCCGTCGTTACTGTGGAGGGTaGCGCTGGCCTTTGGTGAACCAGGGCAGGGTTAAT +
Preference number: 6 (lower is better)
Translates to: LWGHPCRRYCGG*RWPLVNQGRVN
Trigger: ATTAACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGGGTGACCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CAA 72 bp AGACTGGGGGTTGTCCAGTGGGCGACATTCGTGGCCTaGTTCAACACGCACTCCGTCAGGCTGGACGTGCCG +
Preference number: 6 (lower is better)
Translates to: RLGVVQWATFVA*FNTHSVRLDVP
Trigger: CGGCACGTCCAGCCTGACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS TCA 72 bp GATACACACCTGGCGGCTGGTGGGAGGCGGATGCTGTaGGTTCCCAGTTCTTGGCTGTTGTCTGAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: DTHLAAGGRRML*VPSSWLLSERG
Trigger: CCCCCTCTCAGACAACAGCCAAGAACTGGGAACTCACAGCATCCGCCTCCCACCAGCCGCCAGGTGTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000379971.5
ENST00000379972.6
ENST00000379974.1
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397250.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000435171.6
ENST00000447291.5
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp TGTGCACTCGGTCCGGTGTCCCCACTGCGAAGAGAGTaGGCAAAGTCATCGGAGAGCAGACTCTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: CALGPVSPLRRE*AKSSESRLSPA
Trigger: GGCTGGAGAGAGTCTGCTCTCCGATGACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGACCGAGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379972.6
ENST00000379974.1
ENST00000525219.6
ENST00000532948.5
ENST00000534292.5
CDS CCA 72 bp GGGCACGTGATGCCTGCTTGCTGCCTGCTTGTCCGATaGTGGTGGCACTGGGGGCAGTTTTCCATTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GHVMPACCLLVR*WWHWGQFSIVL
Trigger: CAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCATCACGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp GGTAGCAAGTGTTGCTTCCTTCCAGTGGTGTCGCTGTaGCCCTGTGGATACACACCTGGCGGCTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: GSKCCFLPVVSL*PCGYTPGGWWE
Trigger: CTCCCACCAGCCGCCAGGTGTGTATCCACAGGGCCACAGCGACACCACTGGAAGGAAGCAACACTTGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532039.5
ENST00000620865.4
CDS TCA 72 bp GCCGTCGTTACTGTGGAGGGTGGCGCTGGCCTTTGGTaGACCAGGGCAGGGTTAATGCATTTGAGACTGGGG +
Preference number: 6 (lower is better)
Translates to: AVVTVEGGAGLW*TRAGLMHLRLG
Trigger: CCCCAGTCTCAAATGCATTAACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CCA 72 bp CCTGCTTGCTGCCTGCTTGTCCGATGGTGGTGGCACTaGGGGCAGTTTTCCATTGTCCTGAGTCTCACGCAG +
Preference number: 6 (lower is better)
Translates to: PACCLLVRWWWH*GQFSIVLSLTQ
Trigger: CTGCGTGAGACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CAA 72 bp CCCTGCCGTCGTTACTGTGGAGGGTGGCGCTGGCCTTaGGTGAACCAGGGCAGGGTCTCTAATGCATTTGAG +
Preference number: 6 (lower is better)
Translates to: PCRRYCGGWRWP*VNQGRVSNAFE
Trigger: CTCAAATGCATTAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CAA 90 bp ATGCATTTGAGACTGGGGGTTGTCCAGTGGGCGACATTCGTGGCCTaGTTCAACACGCACTCCGTCAGGCTGGACGTGCCGGCTTTACGC +
Preference number: 6 (lower is better)
Translates to: MHLRLGVVQWATFVA*FNTHSVRLDVPALR
Trigger: GCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CAA 90 bp ATCAGCTGGGAGCCCGGGACAATAGCTGCTGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAAGCTGCGGGCTCTTTTCCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: ISWEPGTIAAVVAAV*FELGDEAAGSFPEG
Trigger: CCCTTCTGGAAAAGAGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCACAACAGCAGCTATTGTCCCGGGCTCCCAGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000447291.5
ENST00000453922.1
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS TCA 72 bp GAGGGGGTTGCCCTCAAATCAACAGACGCTTCCCACTaGGCATGTATGTCCAGCACTGCGGGGATGGCAGGA +
Preference number: 6 (lower is better)
Translates to: EGVALKSTDASH*ACMSSTAGMAG
Trigger: TCCTGCCATCCCCGCAGTGCTGGACATACATGCTCAGTGGGAAGCGTCTGTTGATTTGAGGGCAACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379971.5
ENST00000447291.5
CDS TCA 72 bp GCCGTCGTTACTGTGGAGGGTGGCGCTGGCCTTTGGTaGACCAGGGCAGGGTCTCTAATGCATTTGAGACTG +
Preference number: 6 (lower is better)
Translates to: AVVTVEGGAGLW*TRAGSLMHLRL
Trigger: CAGTCTCAAATGCATTAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp TACCTGCCTGCTTGCTGCCTGCTTGTCCGATGGTGGTaGCACTGGGGGCAGTTTTCCATTGTCCTGAGTCTC +
Preference number: 6 (lower is better)
Translates to: YLPACCLLVRWW*HWGQFSIVLSL
Trigger: GAGACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 72 bp CTCTACCTGCCTGCTTGCTGCCTGCTTGTCCGATGGTaGTGGCACTGGGGGCAGTTTTCCATTGTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LYLPACCLLVRW*WHWGQFSIVLS
Trigger: ACTCAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 72 bp CTTCTCTACCTGCCTGCTTGCTGCCTGCTTGTCCGATaGTGGTGGCACTGGGGGCAGTTTTCCATTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LLYLPACCLLVR*WWHWGQFSIVL
Trigger: CAGGACAATGGAAAACTGCCCCCAGTGCCACCACCATCGGACAAGCAGGCAGCAAGCAGGCAGGTAGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CAA 72 bp CCCTGCCGTCGTTACTGTGGAGGGTGGCGCTGGCCTTaGGTGAACCAGGGCAGGGTTAATGCATTTGAGACT +
Preference number: 6 (lower is better)
Translates to: PCRRYCGGWRWP*VNQGRVNAFET
Trigger: AGTCTCAAATGCATTAACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCTCCACAGTAACGACGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS TCA 72 bp CGCACTCCGTCAGGCTGGACGTGCCGGCTTTACGCTTaGAACCAGAGTTACAAATGTACCGCTCCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RTPSGWTCRLYA*NQSYKCTAPWS
Trigger: ACTCCAGGGAGCGGTACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp GTGGTTCCTGTGGAAGGTGATTTTGAAGGCATCAGCTaGGAGCCCGGGACAATAGCTGCTGTTGTGGCCGCT +
Preference number: 6 (lower is better)
Translates to: VVPVEGDFEGIS*EPGTIAAVVAA
Trigger: AGCGGCCACAACAGCAGCTATTGTCCCGGGCTCCCAGCTGATGCCTTCAAAATCACCTTCCACAGGAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000379971.5
ENST00000379974.1
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397250.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000435171.6
ENST00000447291.5
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp GCGGGCTTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCC +
Preference number: 6 (lower is better)
Translates to: AGLMHLRLGVVQ*ATFVALFNTHS
Trigger: GGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAAGCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397246.7
ENST00000429135.2
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
CDS CAA 72 bp ACGCACTCCGTCAGGCTGGACGTGCCGGCTTTACGCTaGAAACCAGAGTTACAAATGTACCGCTCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: THSVRLDVPALR*KPELQMYRSLE
Trigger: CTCCAGGGAGCGGTACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS TCA 72 bp AAATGTACCGCTCCCTGGAGTACAAGCTGTAGCTCTTaGCCCAGATGTCTGCGTGTTCCACGGACATGGGGG +
Preference number: 6 (lower is better)
Translates to: KCTAPWSTSCSS*PRCLRVPRTWG
Trigger: CCCCCATGTCCGTGGAACACGCAGACATCTGGGTCAAGAGCTACAGCTTGTACTCCAGGGAGCGGTACATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS TCA 72 bp GTCTCACGCAGGCCTCGTGTGTCTGGACCTCATGGTTaGAGCTTTCAGATATTCTGCTCCTTCCCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: VSRRPRVSGPHG*SFQIFCSFPPG
Trigger: TCCTGGCGGGAAGGAGCAGAATATCTGAAAGCTTCAACCATGAGGTCCAGACACACGAGGCCTGCGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS GCA 72 bp AGCCCCACTGGCTTTGAGGCCTCTGGTGCTATCTGGTaGTGGAGTGTCAGAGGCTTTTTCTCCATGTTCTGC +
Preference number: 6 (lower is better)
Translates to: SPTGFEASGAIW*WSVRGFFSMFC
Trigger: GCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACCAGATAGCACCAGAGGCCTCAAAGCCAGTGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 72 bp GGGTCTCTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCC +
Preference number: 6 (lower is better)
Translates to: GSLMHLRLGVVQ*ATFVALFNTHS
Trigger: GGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAGAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000379977.8
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000525219.6
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp CTGAGTCTCACGCAGGCCTCGTGTGTCTGGACCTCATaGTTGAAGCTTTCAGATATTCTGCTCCTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LSLTQASCVWTS*LKLSDILLLPA
Trigger: GGCGGGAAGGAGCAGAATATCTGAAAGCTTCAACCATGAGGTCCAGACACACGAGGCCTGCGTGAGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp CCCACTGGCTTTGAGGCCTCTGGTGCTATCTGGTGCTaGAGTGTCAGAGGCTTTTTCTCCATGTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PTGFEASGAIWC*SVRGFFSMFCS
Trigger: GGAGCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACCAGATAGCACCAGAGGCCTCAAAGCCAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 72 bp CAGAGCCCCACTGGCTTTGAGGCCTCTGGTGCTATCTaGTGCTGGAGTGTCAGAGGCTTTTTCTCCATGTTC +
Preference number: 6 (lower is better)
Translates to: QSPTGFEASGAI*CWSVRGFFSMF
Trigger: GAACATGGAGAAAAAGCCTCTGACACTCCAGCACCAGATAGCACCAGAGGCCTCAAAGCCAGTGGGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397246.7
CDS CCA 72 bp GCAGGGTTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCC +
Preference number: 6 (lower is better)
Translates to: AGLMHLRLGVVQ*ATFVALFNTHS
Trigger: GGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAACCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453922.1
CDS CAA 72 bp AGTCTCACGCAGGCCTCGTGTGTCTGGACCTCATGGTaGAAGCTTTCAGATATTCTGCTCCTTCCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLTQASCVWTSW*KLSDILLLPAR
Trigger: CCTGGCGGGAAGGAGCAGAATATCTGAAAGCTTCAACCATGAGGTCCAGACACACGAGGCCTGCGTGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CAA 90 bp ATCAGCTGGGAGCCCGGGACAATAGCTGCTGTTGTGGCCGCTGTGTaGTTTGAGCTGGGAGATGAAGCTGCGGGCTTAATGCATTTGAGA +
Preference number: 6 (lower is better)
Translates to: ISWEPGTIAAVVAAV*FELGDEAAGLMHLR
Trigger: TCTCAAATGCATTAAGCCCGCAGCTTCATCTCCCAGCTCAAACAACACAGCGGCCACAACAGCAGCTATTGTCCCGGGCTCCCAGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397246.7
ENST00000429135.2
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
CDS CCA 72 bp GTGGTTCTAATGCATTTGAGACTGGGGGTTGTCCAGTaGGCGACATTCGTGGCCTTGTTCAACACGCACTCC +
Preference number: 6 (lower is better)
Translates to: VVLMHLRLGVVQ*ATFVALFNTHS
Trigger: GGAGTGCGTGTTGAACAAGGCCACGAATGTCGCCCACTGGACAACCCCCAGTCTCAAATGCATTAGAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379972.6
ENST00000532039.5
CDS CAA 90 bp TTGTTCAACACGCACTCCGTCAGGCTGGACGTGCCGGCTTTACGCTaGAAACCAGAGTTACAAATGTACCGCTCCCTGGAGTACAAGCTG +
Preference number: 6 (lower is better)
Translates to: LFNTHSVRLDVPALR*KPELQMYRSLEYKL
Trigger: CAGCTTGTACTCCAGGGAGCGGTACATTTGTAACTCTGGTTTCAAGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCGTGTTGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000379972.6
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532039.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS CCA 72 bp GGGTGCCGTGGGAGGACTCATGACTGCTTATCTCTGTaGTTCCTGTGGAAGGTGATTTTGAAGGCATCAGCT +
Preference number: 6 (lower is better)
Translates to: GCRGRTHDCLSL*FLWKVILKASA
Trigger: AGCTGATGCCTTCAAAATCACCTTCCACAGGAACCACAGAGATAAGCAGTCATGAGTCCTCCCACGGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000379971.5
ENST00000379974.1
ENST00000379977.8
ENST00000397246.7
ENST00000397248.6
ENST00000397250.6
ENST00000397251.7
ENST00000397255.7
ENST00000429135.2
ENST00000435171.6
ENST00000447291.5
ENST00000453922.1
ENST00000525219.6
ENST00000528354.5
ENST00000530685.5
ENST00000532948.5
ENST00000534292.5
ENST00000620345.4
ENST00000620865.4
ENST00000622442.4
CDS GCA 72 bp TGGTGCTGGAGTGTCAGAGGCTTTTTCTCCATGTTCTaGTCCACACTGATCTTCTGTCCTTCTCTACCTGCC +
Preference number: 6 (lower is better)
Translates to: WCWSVRGFFSMF*STLIFCPSLPA
Trigger: GGCAGGTAGAGAAGGACAGAAGATCAGTGTGGAGCAGAACATGGAGAAAAAGCCTCTGACACTCCAGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397246.7