RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL15 (Homo sapiens)

Ensembl gene IDs: ENSG00000164136

Ensembl transcript IDs: ENST00000296545.11, ENST00000320650.9, ENST00000394159.2, ENST00000477265.5, ENST00000514653.5, ENST00000529613.5

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTaGTACCCAGCCCCACCAATACATAATTTGACTATCACCCTTAAA +
Preference number: 1 (lower is better)
Translates to: PHWQEPTSIAVDLQH*YPAPPIHNLTITLK
Trigger: TTTAAGGGTGATAGTCAAATTATGTATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR GCA 90 bp GTTCTTCTTTTTCTTACTGATAACAAATTCTTCCTCTGTTTGCTATaGTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCAC +
Preference number: 1 (lower is better)
Translates to: VLLFLTDNKFFLCLL*LVRKSMRASSQWFH
Trigger: GTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGTAAGAAAAAGAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR-3UTR TCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAATACCAGCATAGCTGTTaGCCTGCAGCATTGGTACCC +
Preference number: 2 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQYQHSC*PAALVP
Trigger: GGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTA...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACAGAGCCAGTAGTCAGTaGTTCCACACTGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHRASSQ*FHTGRS
Trigger: GCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCT...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACTCAGTGGTTCCACACTaGCAGGAGCCTACCAGCATA +
Preference number: 2 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHSVVPH*QEPTSI
Trigger: TATGCTGGTAGGCTCCTGCCAGTGTGGAACCACTGA...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACCATTCAAAGTTGTCCTaGGCCGCATGTGGCCTGCAA +
Preference number: 2 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHHSKLS*AACGLQ
Trigger: TTGCAGGCCACATGCGGCCCAGGACAACTTTGAATG...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR GCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCATTCCTCTGTTTGCTATaGTTAGTAAGGAAGTCAATG +
Preference number: 2 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAFLCLL*LVRKSM
Trigger: CATTGACTTCCTTACTAAGCATAGCAAACAGAGGAA...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR CAA 90 bp GCTGATGAGCTAAAAACGAGATGTATGAAAGTTTATGAATTTGTGTaGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAAT +
Preference number: 2 (lower is better)
Translates to: ADELKTRCMKVYEFV*GHIQSCPGPHVACN
Trigger: ATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCATAAACTTTCATACATCTCGTTTTTAGCTCATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR GCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAGTAGAAGTTTATTATTaGCACCACCACCAAGATTTA +
Preference number: 2 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAVEVYY*HHHQDL
Trigger: TAAATCTTGGTGGTGGTGGCAATAATAAACTTCTAC...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CCA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCAGTTGACCTGCAGCATTaGTACCCAGCCCCACCAATA +
Preference number: 2 (lower is better)
Translates to: LSYSSIRRELANFRQCSAVDLQH*YPAPPI
Trigger: TATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAAC...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGATCAGTGGTTCCACACTaGCAGGAGCCTACCAGCATA +
Preference number: 2 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRSVVPH*QEPTSI
Trigger: TATGCTGGTAGGCTCCTGCCAGTGTGGAACCACTGA...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR CAA 90 bp TGGACAAGCTTGCACACCATTCTACCTATCAGTAGAAGTTTATTATaGCCACCACCACCAAGATTTACTGATGGACATTATATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: WTSLHTILPISRSLL*PPPPRFTDGHYMPV
Trigger: AACTGGCATATAATGTCCATCAGTAAATCTTGGTGGTGGTGGCAATAATAAACTTCTACTGATAGGTAGAATGGTGTGCAAGCTTGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR CAA 90 bp AATCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTaGGGCCACACTTTAAATACACTACCGCTAATGATAGCTGATGAG +
Preference number: 2 (lower is better)
Translates to: NLLISLGHIGIRRIV*GHTLNTLPLMIADE
Trigger: CTCATCAGCTATCATTAGCGGTAGTGTATTTAAAGTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR GCA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCAGTAGAAGTTTATTATTaGCACCACCACCAAGATTTA +
Preference number: 2 (lower is better)
Translates to: LSYSSIRRELANFRQCSAVEVYY*HHHQDL
Trigger: TAAATCTTGGTGGTGGTGGCAATAATAAACTTCTAC...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR TCA 72 bp GGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTaGCCTGCAGCATTGGTACCCAGCCCCACCAATACA +
Preference number: 3 (lower is better)
Translates to: GSTLAGAYQHSC*PAALVPSPTNT
Trigger: TGTATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR CCA 72 bp TGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTaGCCTGCAATCCGTGATTGGACAAGCTTGCACACC +
Preference number: 3 (lower is better)
Translates to: CWATFKVVLGRM*PAIRDWTSLHT
Trigger: GGTGTGCAAGCTTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR TCA 72 bp CAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTaGTTGGACAAGCTTGCACACCATTCTACCTATCAG +
Preference number: 3 (lower is better)
Translates to: QSCPGPHVACNP*LDKLAHHSTYQ
Trigger: CTGATAGGTAGAATGGTGTGCAAGCTTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR CCA 72 bp GTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTaGACAAGCTTGCACACCATTCTACCTATCAGTAGA +
Preference number: 3 (lower is better)
Translates to: VVLGRMWPAIRD*TSLHTILPISR
Trigger: TCTACTGATAGGTAGAATGGTGTGCAAGCTTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR CCA 72 bp CAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTaGTACCCAGCCCCACCAATACATAATTTGACTATC +
Preference number: 3 (lower is better)
Translates to: QEPTSIAVDLQH*YPAPPIHNLTI
Trigger: GATAGTCAAATTATGTATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR-3UTR CAA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGGGTCTGATCATCTTCTaGACAGAAAAACTTGTTTTG +
Preference number: 3 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWGLIIF*TEKLVL
Trigger: CAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACC...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR-3UTR CAA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR-3UTR CAA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR-3UTR CAA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CAA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGGTCTGATCATCTTCTaGACAGAAAAACTTGTTTTG +
Preference number: 3 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHGLIIF*TEKLVL
Trigger: CAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
3UTR-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
3UTR-3UTR CAA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
3UTR-3UTR CAA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCAAGTAGAAGTTTATTATaGCCACCACCACCAAGATTT +
Preference number: 3 (lower is better)
Translates to: LSYSSIRRELANFRQCSASRSLL*PPPPRF
Trigger: AAATCTTGGTGGTGGTGGCAATAATAAACTTCTACT...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCCGCAGCCGGGAGGGTaGGGCCACCCAGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWPQPGG*GHPVPS
Trigger: GGAGGGAACTGGGTGGCCGCACCCTCCCGGCTGCGG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGATTTCCTTGGCTCCATaGGGCACCGCCCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWISLAP*GTALLG
Trigger: CCCCAACAGGGCGGTGCCTCATGGAGCCAAGGAAAT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCCCGCAGCCGGGAGGGTaGGGCCACCCAGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGPQPGG*GHPVPS
Trigger: GGAGGGAACTGGGTGGCCGCACCCTCCCGGCTGCGG...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR GCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAACTCAGCCCTCAGGGCTaGGGGACAGCGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQLSPQG*GTASSQ
Trigger: CTGAGAAGACGCTGTCCCGCAGCCCTGAGGGCTGAG...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR GCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCATTCCCCCGGGCGCCTaGCACCCGGAGTCCCAACCC +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGIPPGA*HPESQP
Trigger: GGGTTGGGACTCCGGGTGGCAGGCGCCCGGGGGAAT...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320650.9
CDS-3UTR CCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAAGTGAGCGAGTCAGCTaGGATTCCCCCGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: MNLCWATFKVVLGRMWPASERVS*DSPGRL
Trigger: CAGGCGCCCGGGGGAATCCCAGCTGACTCGCTCACT...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGAGAGCCAGTAGTCAGTaGTTCCACACTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWRASSQ*FHTGRS
Trigger: GCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCTGCAAGGTGACTGCTaGCTCATGGCAGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWLQGDC*LMAALK
Trigger: TTTCAGTGCTGCCATGAGTCAGCAGTCACCTTGCAG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTACAGCCCTGGGCAGTATaGCCATGGAGAGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLQPWAV*PWRATR
Trigger: CCTGGTTGCTCTCCATGGGCATACTGCCCAGGGCTG...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGTGAGCGAGTCAGCTaGGATTCCCCCGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGSERVS*DSPGRL
Trigger: CAGGCGCCCGGGGGAATCCCAGCTGACTCGCTCACT...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCACCGGAAGCGGGAGGATaGCTAGGAGAGCCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAPEAGG*LGEPQK
Trigger: CTTCTGAGGCTCTCCTAGCCATCCTCCCGCTTCCGG...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCATTCAAAGTTGTCCTaGGCCGCATGTGGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWHSKLS*AACGLQ
Trigger: TTGCAGGCCACATGCGGCCCAGGACAACTTTGAATG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCACAGTTCTGGAGGCTaGGAAGTACAAGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWHSSGG*EVQVHG
Trigger: GCCATGCACTTGTACTTCCCAGCCTCCAGAACTGTG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGTTTCTGTGCTCCATGTaGCGTCAGCAGCATGGAACA +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWFLCSM*RQQHGT
Trigger: TGTTCCATGCTGCTGACGTCACATGGAGCACAGAAA...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR GCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGGGCAAAGGGACCTaGGATCTGCGCTCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGRGKGT*DLRSSG
Trigger: TCCGGAGGAGCGCAGATCGCAGGTCCCTTTGCCCCT...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACCAGAAACCCGCAGCTTaGCTGGGGCCGCCAGACGCG +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHQKPAA*LGPPDA
Trigger: CGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTG...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAAAGAGCCAGTAGTCAGTaGTTCCACACTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQRASSQ*FHTGRS
Trigger: GCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCT...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGTTTCCTCTGAACACCTaGGAAGATGGAGCTGACATC +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWFPLNT*EDGADI
Trigger: GATGTCAGCTCCATCTTCTCAGGTGTTCAGAGGAAA...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGTTTCACTCCATATTCTaGATCCTGGGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWFHSIF*ILGTLG
Trigger: ACCCAGTGTGCCCAGGATGCAGAATATGGAGTGAAA...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCTCCACCATAGAGTGTaGTTGCCAAACATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWLHHRV*LPNMEE
Trigger: TTCCTCCATGTTTGGCAACCACACTCTATGGTGGAG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAATTTCTGTGCTCCATGTaGCGTCAGCAGCATGGAACA +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQFLCSM*RQQHGT
Trigger: TGTTCCATGCTGCTGACGTCACATGGAGCACAGAAA...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGAGCTCTTGTATTCTGTaGGACTGCAGGCTTAACACT +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWSSCIL*DCRLNT
Trigger: AGTGTTAAGCCTGCAGTCTCACAGAATACAAGAGCT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGTGCCCGGCCCGCCTTaGGCTAGCCAGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRVPGPP*ASQQPG
Trigger: TCCAGGCTGCTGGCTAGCGCAAGGCGGGCCGGGCAC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR GCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGAACATGATGGAACATTaGTCCAAAGAGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWNMMEH*SKEPHG
Trigger: GCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR GCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGTGTTTTAGGAAGCCCTaGACTGAAACAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWCFRKP*TETAAQ
Trigger: TTGTGCAGCTGTTTCAGTGCAGGGCTTCCTAAAACA...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394159.2
ENST00000477265.5
CDS-3UTR GCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGACCATAGAGTGTGGTTaGCAAACATGGAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWTIECG*QTWRNA
Trigger: TGCATTCCTCCATGTTTGGCAACCACACTCTATGGT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAAACCCGCAGCTTGGCTaGGGCCGCCAGACGCGCGTC +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRNPQLG*GRQTRV
Trigger: GACGCGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTT...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR CCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAAAGAAGAGCTGGCTATaGCAAGGGGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAKKSWL*QGVSSS
Trigger: GCTGCTGGAAACCCCTTGCCATAGCCAGCTCTTCTT...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTATCAGTGGTTCCACACTaGCAGGAGCCTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLSVVPH*QEPTSI
Trigger: TATGCTGGTAGGCTCCTGCCAGTGTGGAACCACTGA...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGACTTTGCAACTGGGGTaGACATCACTTTCCGTATAT +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWTLQLG*TSLSVY
Trigger: ATATACGGAAAGTGATGTTCACCCCAGTTGCAAAGT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR GCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAGCTGGGAAGTACAAGTaGATGGCACTGACATCTGCT +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLAGKYK*MALTSA
Trigger: AGCAGATGTCAGTGCCATGCACTTGTACTTCCCAGC...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCCAGAAACCCGCAGCTTaGCTGGGGCCGCCAGACGCG +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSQKPAA*LGPPDA
Trigger: CGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTG...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR CCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGTCCTGGGCCGCATGTaGCCTGCAATCCGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHVLGRM*PAIRDW
Trigger: CCAATCACGGATTGCAGGCCACATGCGGCCCAGGAC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAGTGAAAGCAAGCACATaGGACAGAGAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLVKAST*DREETE
Trigger: CTCAGTTTCCTCTCTGTCTCATGTGCTTGCTTTCAC...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCCCCATAGCAAGTACATaGCAGCCAGGATTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGPIAST*QPGFEA
Trigger: GGCCTCAAATCCTGGCTGTCATGTACTTGCTATGGG...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAATGTTTTAGGAAGCCCTaGACTGAAACAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQCFRKP*TETAAQ
Trigger: TTGTGCAGCTGTTTCAGTGCAGGGCTTCCTAAAACA...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394159.2
CDS-3UTR GCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTACTACCCTCCCCTCTCTaGCAAATTCACATCCTTCAT +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLLPSPL*QIHILH
Trigger: ATGAAGGATGTGAATTTGGCAGAGAGGGGAGGGTAG...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGTCCTGGCTGCAGGGTaGGGGGCGACAGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRVLAAG*GATATA
Trigger: TGCGGTGGCTGTCGCCCCCCACCCTGCAGCCAGGAC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTCCTGGCTGCAGGGTaGGGGGCGACAGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLVLAAG*GATATA
Trigger: TGCGGTGGCTGTCGCCCCCCACCCTGCAGCCAGGAC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTAACCCGCAGCTTGGCTaGGGCCGCCAGACGCGCGTC +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLNPQLG*GRQTRV
Trigger: GACGCGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTT...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR CCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCCATTCAAAGTTGTCCTaGGCCGCATGTGGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGHSKLS*AACGLQ
Trigger: TTGCAGGCCACATGCGGCCCAGGACAACTTTGAATG...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGTTCCCTGGGCCACATTaGAATAAGAAGAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWFPGPH*NKKNCL
Trigger: AAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAA...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGTGTCAACATGAGTTTTaGTGGAGGCATTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWCQHEF*WRHSNH
Trigger: ATGGTTTGAATGCCTCCACCAAAACTCATGTTGACA...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTACTAAGGGTCATCCTGTaGCAGAAGGGTAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLLRVIL*QKGRSE
Trigger: TTCACTTCTACCCTTCTGCCACAGGATGACCCTTAG...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGAAGACAAGCCGAGACTaGATAGAATATAGAGACTAT +
Preference number: 4 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWKTSRD*IEYRDY
Trigger: ATAGTCTCTATATTCTATTCAGTCTCGGCTTGTCTT...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAAGGGACCTGCGATCTaGGCTCCTCCGGAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSKGPAI*APPEAG
Trigger: TCCCGCTTCCGGAGGAGCGCAGATCGCAGGTCCCTT...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR GCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAATCATTGCTGTTACTTTaGAACTGGGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQSLLLL*NWGEHH
Trigger: GTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGA...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAGAAATCCTAGCAGGATaGTACTGCCCAGGGAAAATA +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLEILAG*YCPGKI
Trigger: TATTTTCCCTGGGCAGTACCATCCTGCTAGGATTTC...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAACTTTGCAACTGGGGTaGACATCACTTTCCGTATAT +
Preference number: 4 (lower is better)
Translates to: MNLCWATFKVVLGRMWPATLQLG*TSLSVY
Trigger: ATATACGGAAAGTGATGTTCACCCCAGTTGCAAAGT...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACTACCAGCATAGCTGTTaGCCTGCAGCATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHYQHSC*PAALVP
Trigger: GGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTA...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAAACCACCAAGATTTACTaGTGGACATTATATGCCAGT +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQTTKIY*WTLYAS
Trigger: ACTGGCATATAATGTCCATCAGTAAATCTTGGTGGT...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAAAGGGACCTGCGATCTaGGCTCCTCCGGAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTKGPAI*APPEAG
Trigger: TCCCGCTTCCGGAGGAGCGCAGATCGCAGGTCCCTT...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR CCA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAAGGCCATATATTGGAATaGATTCTTTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQGHILE*ILFLAF
Trigger: GAAGGCCAAGAAAAGAATCCATTCCAATATATGGCC...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CCA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCACGATCTTGTATGGGCTaGCTATCTGCTAACATTGAT +
Preference number: 4 (lower is better)
Translates to: MNLCWATFKVVLGRMWPARSCMG*LSANID
Trigger: ATCAATGTTAGCAGATAGCCAGCCCATACAAGATCG...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGTCCTGGGCCGCATGTaGCCTGCAATCCGTGATTGG +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSVLGRM*PAIRDW
Trigger: CCAATCACGGATTGCAGGCCACATGCGGCCCAGGAC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGTCCTGGGCCGCATGTaGCCTGCAATCCGTGATTGG +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRVLGRM*PAIRDW
Trigger: CCAATCACGGATTGCAGGCCACATGCGGCCCAGGAC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCACATGGCCATATATTaGAATGGATTCTCCATCGAG +
Preference number: 4 (lower is better)
Translates to: NLCWATFKVVLGRMWPAIHMAIY*NGFSIE
Trigger: CTCGATGGAGAATCCATTCCAATATATGGCCATGTG...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320650.9
CDS-3UTR TCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGGACTTCGAAGGCAGTaGGCGAGTCAGCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEGLRRQ*ASQLGF
Trigger: GAATCCCAGCTGACTCGCTCACTGCCTTCGAAGTCC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR TCA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCTTTTCTACTGTATCATaGATACTTGCATCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: NLCWATFKVVLGRMWPAIFSTVS*ILASPD
Trigger: GTCCGGAGATGCAAGTATTCATGATACAGTAGAAAA...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAACACAGCTGATGCCTTaGGGAGAGGGGACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTATQLMP*GEGTGQ
Trigger: CTGACCTGTCCCCTCTCCTCAAGGCATCAGCTGTGT...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCTCAGCCCTCAGGGCTaGGGGACAGCGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLLSPQG*GTASSQ
Trigger: CTGAGAAGACGCTGTCCCGCAGCCCTGAGGGCTGAG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATGGGCAGTATGCCCATaGAGAGCAACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTWAVCP*RATRWG
Trigger: GCCCCACCTGGTTGCTCTCCATGGGCATACTGCCCA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGAGGCACCGCCCTGTTaGGGGCTCTCTGTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMREAPPC*GLSVVV
Trigger: AACCACCACAGAGAGCCCCCAACAGGGCGGTGCCTC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
3UTR CAA 72 bp GGCCGCATGTGGCCTGCAATCCGTGATTGGACAAGCTaGCACACCATTCTACCTATCAGTAGAAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: GRMWPAIRDWTS*HTILPISRSLL
Trigger: TAATAAACTTCTACTGATAGGTAGAATGGTGTGCAAGCTTGTCCAATCACGGATTGCAGGCCACATGCGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGATCTCACTGCAAGGTaGCTGCTGACTCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRDLTAR*LLTHGS
Trigger: GCTGCCATGAGTCAGCAGTCACCTTGCAGTGAGATC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCGCAACCACGAGCCTGTaGAATCAAAATAAGCTATCT +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGATTSL*NQNKLS
Trigger: AGATAGCTTATTTTGATTTCACAGGCTCGTGGTTGC...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTACATTTCTACAGCCACTaGATATGTATCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLHFYSH*ICIFSL
Trigger: AAGACTGAAGATACATATTCAGTGGCTGTAGAAATG...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTATTCCTCTGTTTGCTATaGTTAGTAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLFLCLL*LVRKSM
Trigger: CATTGACTTCCTTACTAAGCATAGCAAACAGAGGAA...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR GCA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCTTCCTCTGTTTGCTATaGTTAGTAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: NLCWATFKVVLGRMWPAIFLCLL*LVRKSM
Trigger: CATTGACTTCCTTACTAAGCATAGCAAACAGAGGAA...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGGACTTCGAAGGCAGTaGGCGAGTCAGCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRGLRRQ*ASQLGF
Trigger: GAATCCCAGCTGACTCGCTCACTGCCTTCGAAGTCC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR TCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCTTTTCTACTGTATCATaGATACTTGCATCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGFSTVS*ILASPD
Trigger: GTCCGGAGATGCAAGTATTCATGATACAGTAGAAAA...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR TCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCTACCAGCATAGCTGTTaGCCTGCAGCATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSYQHSC*PAALVP
Trigger: GGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTA...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR GCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACAACATGATGGAACATTaGTCCAAAGAGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHNMMEH*SKEPHG
Trigger: GCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTT...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR GCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAAGCAGTGGGTCAAGCTaGAGCTGGGGCCACTTAAGC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRSSGSS*SWGHLS
Trigger: GCTTAAGTGGCCCCAGCTGCAGCTTGACCCACTGCT...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGTGGTTCTACCCCTGTaGAAAGTCTCTGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCVVLPL*KVSACA
Trigger: GGCACAGGCAGAGACTTTGCACAGGGGTAGAACCAC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGTTGACCTGCAGCATTaGTACCCAGCCCCACCAATA +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEVDLQH*YPAPPI
Trigger: TATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAAC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCATCAGTGGTTCCACACTaGCAGGAGCCTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTASVVPH*QEPTSI
Trigger: TATGCTGGTAGGCTCCTGCCAGTGTGGAACCACTGA...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTAGAGCCAGTAGTCAGTaGTTCCACACTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCRASSQ*FHTGRS
Trigger: GCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCT...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCCATTCAAAGTTGTCCTaGGCCGCATGTGGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSHSKLS*AACGLQ
Trigger: TTGCAGGCCACATGCGGCCCAGGACAACTTTGAATG...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAATTCCCATTCTAAAATaGGGAAATAGGCAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLIPILK*GNRQEK
Trigger: CTTTTCTTGCCTATTTCCCCATTTTAGAATGGGAAT...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATTTCTGTGCTCCATGTaGCGTCAGCAGCATGGAACA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRFLCSM*RQQHGT
Trigger: TGTTCCATGCTGCTGACGTCACATGGAGCACAGAAA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR TCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATACCAGCATAGCTGTTaGCCTGCAGCATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTYQHSC*PAALVP
Trigger: GGGTACCAATGCTGCAGGTCAACAGCTATGCTGGTA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR TCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGGGCATCCAATCTTTTaGTTTCCCTGGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEGHPIF*FPWATL
Trigger: CAATGTGGCCCAGGGAAATCAAAAGATTGGATGCCC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAGAAGCCAGTGGAATaGGCAAGGGCAAGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEKKPVE*ARARVV
Trigger: GACTACTCTTGCCCTTGCTCATTCCACTGGCTTCTT...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGACTCATGGCAGCACTaGAATCCTAGCAGGATGGTA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRDSWQH*NPSRMV
Trigger: TACCATCCTGCTAGGATTTCAGTGCTGCCATGAGTC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGCTCTGCTTGCTGCCTaGATCCATTTTCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSALLAA*IHFLLL
Trigger: TAGCAGCAGAAAATGGATTCAGGCAGCAAGCAGAGC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAAGTGGAGGAAGCCATaGCCCCTCAGCTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSKWRKP*PLSSCI
Trigger: AATACAAGAGCTGAGGGGGCATGGCTTCCTCCACTT...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACCAATACGATCTTGTATaGGCTGGCTATCTGCTAACA +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHQYDLV*AGYLLT
Trigger: TGTTAGCAGATAGCCAGCCCATACAAGATCGTATTG...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTAAGAAGAGCTGGCTATaGCAAGGGGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCKKSWL*QGVSSS
Trigger: GCTGCTGGAAACCCCTTGCCATAGCCAGCTCTTCTT...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAAAGAAGAGCTGGCTATaGCAAGGGGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTKKSWL*QGVSSS
Trigger: GCTGCTGGAAACCCCTTGCCATAGCCAGCTCTTCTT...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGTTGACCTGCAGCATTaGTACCCAGCCCCACCAATA +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTVDLQH*YPAPPI
Trigger: TATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAAC...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAAGAGCCAGTAGTCAGTaGTTCCACACTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRRASSQ*FHTGRS
Trigger: GCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCT...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGGACCTGAATCTGCTTaGGGTAGCAGTGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSGPESA*GSSGDR
Trigger: TCTATCTCCACTGCTACCCCAAGCAGATTCAGGTCC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGGTAGGAATTGTTTaGAATCTTGTGATTGGATCT +
Preference number: 4 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGRVGIV*NLVIGS
Trigger: AGATCCAATCACAAGATTCCAAACAATTCCTACCCT...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGGGTCAAGCTGCAGCTaGGGCCACTTAAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLGSSCS*GHLSHS
Trigger: ACTATGGCTTAAGTGGCCCCAGCTGCAGCTTGACCC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATATCTTGTGAAGCAGTaGGTCAAGCTGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTYLVKQ*VKLQLG
Trigger: CCCCAGCTGCAGCTTGACCCACTGCTTCACAAGATA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGGACACAAGCTCATTTaGCTCACAGTTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSGHKLI*LTVLEA
Trigger: AGCCTCCAGAACTGTGAGCCAAATGAGCTTGTGTCC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCAGGGCATCCAATCTTTTaGTTTCCCTGGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: LSYSSIRRELANFRQCSAGHPIF*FPWATL
Trigger: CAATGTGGCCCAGGGAAATCAAAAGATTGGATGCCC...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGGAGCTGACATCAACTaGAAAAAGCAAGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSGADIN*KKQALD
Trigger: GTCCAAGGCTTGCTTTTTTCAGTTGATGTCAGCTCC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGACTGAGTCTTTTCCTCTaGACACCTGAGAAGATGGAG +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRLSLFL*TPEKME
Trigger: CTCCATCTTCTCAGGTGTTCAGAGGAAAAGACTCAG...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCACCCGAAACCATTCTaGCATCCTAGAACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLHPKPF*HPRTLG
Trigger: GCCCAGAGTTCTAGGATGGCAGAATGGTTTCGGGTG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGGATTTTCACTACCCTaGTCAACTACATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSGFSLP*STTSCW
Trigger: CCAGCAGGATGTAGTTGAGCAGGGTAGTGAAAATCC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAGTGACGTCAGCAGCATaGAACATGATGGAACATTGC +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAVTSAA*NMMEHC
Trigger: GCAATGTTCCATCATGTTCCATGCTGCTGACGTCAC...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGTGACGTCAGCAGCATaGAACATGATGGAACATTGC +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSVTSAA*NMMEHC
Trigger: GCAATGTTCCATCATGTTCCATGCTGCTGACGTCAC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTGACCTGCAGCATTaGTACCCAGCCCCACCAATA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLVDLQH*YPAPPI
Trigger: TATTGGTGGGGCTGGGTACCAATGCTGCAGGTCAAC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTTCAGTGGTTCCACACTaGCAGGAGCCTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLSVVPH*QEPTSI
Trigger: TATGCTGGTAGGCTCCTGCCAGTGTGGAACCACTGA...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
3UTR CAA 72 bp CTAAAAACGAGATGTATGAAAGTTTATGAATTTGTGTaGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTG +
Preference number: 4 (lower is better)
Translates to: LKTRCMKVYEFV*GHIQSCPGPHV
Trigger: CACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCATAAACTTTCATACATCTCGTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGGGCATCCAATCTTTTaGTTTCCCTGGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLGHPIF*FPWATL
Trigger: CAATGTGGCCCAGGGAAATCAAAAGATTGGATGCCC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGGAAGCCAGTGTAGATaGAAAGAAGTATTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLGSQCR*KEVLAG
Trigger: CCCGGCCAATACTTCTTTTCATCTACACTGGCTTCC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAAACATGATGGAACATTaGTCCAAAGAGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTANMMEH*SKEPHG
Trigger: GCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTT...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR GCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGTTCCTCACATTCTTTaGATCCAGATTCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHVPHIL*IQILLH
Trigger: ATGTAACAGAATCTGGATGCAAAGAATGTGAGGAAC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGAAGCTTTTCCAGACTaGAGCTCTACACTGTTAACC +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSEAFPD*SSTLLT
Trigger: GGTTAACAGTGTAGAGCTGCAGTCTGGAAAAGCTTC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGTGACGTCAGCAGCATaGAACATGATGGAACATTGC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCVTSAA*NMMEHC
Trigger: GCAATGTTCCATCATGTTCCATGCTGCTGACGTCAC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGGCCATATATTGGAATaGATTCTCCATCGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSGHILE*ILHRVL
Trigger: CAGGACTCGATGGAGAATCCATTCCAATATATGGCC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACACAGAAAAGAAGCCAGTaGAATGAGCAAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTQKRSQ*NEQGQE
Trigger: CTCTTGCCCTTGCTCATTCCACTGGCTTCTTTTCTG...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTCTTTTGAAATCAAAGTaGAGGAAGCCATGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCLLKSK*RKPCPL
Trigger: GAGGGGGCATGGCTTCCTCCACTTTGATTTCAAAAG...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGGCTCACAGTTCTaGAGGCTGGGAAGTACAAGT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCFGSQF*RLGSTS
Trigger: ACTTGTACTTCCCAGCCTCCAGAACTGTGAGCCAAA...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAACCCAAAATGAAGACATaGATGCCAGCTTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEPKMKT*MPASVR
Trigger: TCTAACTGAAGCTGGCATTCATGTCTTCATTTTGGG...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGACCCAAAATGAAGACATaGATGCCAGCTTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRPKMKT*MPASVR
Trigger: TCTAACTGAAGCTGGCATTCATGTCTTCATTTTGGG...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCACCCAAAATGAAGACATaGATGCCAGCTTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAPKMKT*MPASVR
Trigger: TCTAACTGAAGCTGGCATTCATGTCTTCATTTTGGG...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAACTTTGCAACTGGGGTaGACATCACTTTCCGTATAT +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTATLQLG*TSLSVY
Trigger: ATATACGGAAAGTGATGTTCACCCCAGTTGCAAAGT...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCACTTTGCAACTGGGGTaGACATCACTTTCCGTATAT +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSTLQLG*TSLSVY
Trigger: ATATACGGAAAGTGATGTTCACCCCAGTTGCAAAGT...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCTTGTTTGGAATCTTGTaGTTGGATCTCACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSLFGIL*LDLTAR
Trigger: CCTTGCAGTGAGATCCAATCACAAGATTCCAAACAA...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGTCAGCATCATCTTTTaGAATCAAAGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEVSIIF*NQSGGS
Trigger: GCTTCCTCCACTTTGATTTCAAAAGATGATGCTGAC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGGTGTGACTTCATCCTaGAGGCAAATGTTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRGVTSS*RQMFCN
Trigger: GTTGCAGAACATTTGCCTTCAGGATGAAGTCACACC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATGTTTTAGGAAGCCCTaGACTGAAACAGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRCFRKP*TETAQN
Trigger: ATTTTGGGCTGTTTCAGTGCAGGGCTTCCTAAAACA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000529613.5
CDS-3UTR GCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATCATTGCTGTTACTTTaGAACTGGGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRSLLLL*NWGEHH
Trigger: GTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCTCATTGCTGTTACTTTaGAACTGGGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSSLLLL*NWGEHH
Trigger: GTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGA...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGTAGAAGTTTATTATTaGCACCACCACCAAGATTTA +
Preference number: 4 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHVEVYY*HHHQDL
Trigger: TAAATCTTGGTGGTGGTGGCAATAATAAACTTCTAC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATGTTTTAGGAAGCCCTaGACTGAAACAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTCFRKP*TETAAQ
Trigger: TTGTGCAGCTGTTTCAGTGCAGGGCTTCCTAAAACA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCGGGGCTCACACCATTaGTATTTCCCAAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLRGSHH*YFPSKS
Trigger: TGATTTGCTTGGGAAATAGCAATGGTGTGAGCCCCG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTCACACAGTTGCCTCTaGTCTAGATTTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCSHSCL*SRFSFC
Trigger: GCAGAAGGAAAATCTAGAGCAGAGGCAACTGTGTGA...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGTGATTGGATCTCACTaGAAGGTGACTGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRVIGSH*KVTADS
Trigger: TGAGTCAGCAGTCACCTTGCAGTGAGATCCAATCAC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGATGGGTTGGAGTCTCATaGCTGAAGCTTTTCCAGACT +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRWVGVS*LKLFQT
Trigger: AGTCTGGAAAAGCTTCAGGCATGAGACTCCAACCCA...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCACTCCAAAGAGCCACATaGCCATATATTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTALQRAT*PYIGMD
Trigger: ATCCATTCCAATATATGGCCATGTGGCTCTTTGGAG...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAACGATCTTGTATGGGCTaGCTATCTGCTAACATTGAT +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTERSCMG*LSANID
Trigger: ATCAATGTTAGCAGATAGCCAGCCCATACAAGATCG...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCACAATACGATCTTGTATaGGCTGGCTATCTGCTAACA +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAQYDLV*AGYLLT
Trigger: TGTTAGCAGATAGCCAGCCCATACAAGATCGTATTG...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGGCCATATATTGGAATaGATTCTCCATCGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCGHILE*ILHRVL
Trigger: CAGGACTCGATGGAGAATCCATTCCAATATATGGCC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCCACATGGCCATATATTaGAATGGATTCTCCATCGAG +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSHMAIY*NGFSIE
Trigger: CTCGATGGAGAATCCATTCCAATATATGGCCATGTG...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCATTGGAATCTTGTGATTaGATCTCACTGCAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTALESCD*ISLQGD
Trigger: GTCACCTTGCAGTGAGATCCAATCACAAGATTCCAA...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAATTCTAGGATTTTGGTaGCAACCCCATTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTILGFW*QPHFLG
Trigger: GCCAAGGAAATGGGGTTGCCACCAAAATCCTAGAAT...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGAAAACGATCTTGTATaGGCTGGCTATCTGCTAACA +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEENDLV*AGYLLT
Trigger: TGTTAGCAGATAGCCAGCCCATACAAGATCGTTTTC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514653.5
3UTR CAA 72 bp CTGCAGCATTGGTACCCAGCCCCACCAATACATAATTaGACTATCACCCTTAAACAAATGCTATTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LQHWYPAPPIHN*TITLKQMLFCN
Trigger: ATTGCAAAATAGCATTTGTTTAAGGGTGATAGTCAAATTATGTATTGGTGGGGCTGGGTACCAATGCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR TCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTCCCAAAATGAAGACATaGATGCCAGCTTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCPKMKT*MPASVR
Trigger: TCTAACTGAAGCTGGCATTCATGTCTTCATTTTGGG...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTACTTTGCAACTGGGGTaGACATCACTTTCCGTATAT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCTLQLG*TSLSVY
Trigger: ATATACGGAAAGTGATGTTCACCCCAGTTGCAAAGT...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCTTTTCTACTGTATCATaGATACTTGCATCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSFSTVS*ILASPD
Trigger: GTCCGGAGATGCAAGTATTCATGATACAGTAGAAAA...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAATTTTCTACTGTATCATaGATACTTGCATCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEFSTVS*ILASPD
Trigger: GTCCGGAGATGCAAGTATTCATGATACAGTAGAAAA...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATTTTCTACTGTATCATaGATACTTGCATCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRFSTVS*ILASPD
Trigger: GTCCGGAGATGCAAGTATTCATGATACAGTAGAAAA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAAATCAAATATGGGTGTaGCTTCATCCTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRNQIWV*LHPEGK
Trigger: TTTGCCTTCAGGATGAAGTCACACCCATATTTGATT...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATGTTTTAGGAAGCCCTaGACTGAAACAGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTCFRKP*TETAQN
Trigger: ATTTTGGGCTGTTTCAGTGCAGGGCTTCCTAAAACA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000529613.5
CDS-3UTR GCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTCATTGCTGTTACTTTaGAACTGGGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCSLLLL*NWGEHH
Trigger: GTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGA...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATCATTGCTGTTACTTTaGAACTGGGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTSLLLL*NWGEHH
Trigger: GTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCTAGCAGGATGGTACTaGCCAGGGAAAATACATAGT +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLLAGWY*PGKIHS
Trigger: ACTATGTATTTTCCCTGGGCAGTACCATCCTGCTAG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGACCTGAATCCATTTTCTaGTGCTATAAGAGAACACCA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRPESIF*CYKRTP
Trigger: TGGTGTTCTCTTATAGCAGCAGAAAATGGATTCAGG...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTATAGCTCTGCTTGCTaGCTGAATCCATTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCYSSAC*LNPFSA
Trigger: AGCAGAAAATGGATTCAGGCAGCAAGCAGAGCTATA...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTCTCCAAAGAGCCACATaGCCATATATTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCLQRAT*PYIGMD
Trigger: ATCCATTCCAATATATGGCCATGTGGCTCTTTGGAG...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACACGATCTTGTATGGGCTaGCTATCTGCTAACATTGAT +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTRSCMG*LSANID
Trigger: ATCAATGTTAGCAGATAGCCAGCCCATACAAGATCG...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR TCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCCCAAAATGAAGACATaGATGCCAGCTTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLPKMKT*MPASVR
Trigger: TCTAACTGAAGCTGGCATTCATGTCTTCATTTTGGG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATTTTCTACTGTATCATaGATACTTGCATCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTFSTVS*ILASPD
Trigger: GTCCGGAGATGCAAGTATTCATGATACAGTAGAAAA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR TCA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCAACCACCAAGATTTACTaGTGGACATTATATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSYSSIRRELANFRQCSATTKIY*WTLYAS
Trigger: ACTGGCATATAATGTCCATCAGTAAATCTTGGTGGT...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGTTCAGGAATGTGTCTaGACTGGAAATAGATATGCA +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCVQECV*TGNRYA
Trigger: TGCATATCTATTTCCAGTTCAGACACATTCCTGAAC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACACCCAGTGAGGAAAGATaGTCTAACATACTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTPSEER*SNILDV
Trigger: AACATCAAGTATGTTAGATCATCTTTCCTCACTGGG...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGTTTTCATTCTGGAGTaGAAACTGTCCCTTAGACTC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRVFILE*KLSLRL
Trigger: GAGTCTAAGGGACAGTTTTCACTCCAGAATGAAAAC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTATATTGACTTGGGATTaGGCAATGCCATGGGTGATA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLILTWD*AMPWVI
Trigger: TATCACCCATGGCATTGCTCAATCCCAAGTCAATAT...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGATCATTGCTGTTACTTTaGAACTGGGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRSLLLL*NWGEHH
Trigger: GTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGA...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR GCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGTTCCTCACATTCTTTaGATCCAGATTCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEVPHIL*IQILLH
Trigger: ATGTAACAGAATCTGGATGCAAAGAATGTGAGGAAC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGTTCCTCACATTCTTTaGATCCAGATTCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSVPHIL*IQILLH
Trigger: ATGTAACAGAATCTGGATGCAAAGAATGTGAGGAAC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATTCCTCTGTTTGCTATaGTTAGTAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRFLCLL*LVRKSM
Trigger: CATTGACTTCCTTACTAAGCATAGCAAACAGAGGAA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCACTCCCTCCATAACTaGATTAATCCATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLHSLHN*INPFMR
Trigger: CCTCATGAATGGATTAATGCAGTTATGGAGGGAGTG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTCTCCAAAGAGCCACATaGCCATATATTGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLLQRAT*PYIGMD
Trigger: ATCCATTCCAATATATGGCCATGTGGCTCTTTGGAG...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTCCCTGGGCCACATTaGAATAAGAAGAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCFPGPH*NKKNCL
Trigger: AAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAA...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGGAGATAGATACATGTaGTTAGAGTCTGGAATCATT +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRGDRYM*LESGII
Trigger: AATGATTCCAGACTCTAACCACATGTATCTATCTCC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAATAATTCTAGGATTTTaGTGGCAACCCCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEIILGF*WQPHFL
Trigger: AAGGAAATGGGGTTGCCACCAAAATCCTAGAATTAT...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATTTACAATGTCACAATaGATTTTCACTACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRFTMSQ*IFTTLL
Trigger: GAGCAGGGTAGTGAAAATCCATTGTGACATTGTAAA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR TCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAACCACCAAGATTTACTaGTGGACATTATATGCCAGT +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRTTKIY*WTLYAS
Trigger: ACTGGCATATAATGTCCATCAGTAAATCTTGGTGGT...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR TCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTATCTGCCACAACCCATaGCATAAATATTCACTGAAT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCICHNP*HKYSLN
Trigger: ATTCAGTGAATATTTATGTCATGGGTTGTGGCAGAT...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGTTCCTCACATTCTTTaGATCCAGATTCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCVPHIL*IQILLH
Trigger: ATGTAACAGAATCTGGATGCAAAGAATGTGAGGAAC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR GCA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCATTCCTCTGTTTGCTATaGTTAGTAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LSYSSIRRELANFRQCSAFLCLL*LVRKSM
Trigger: CATTGACTTCCTTACTAAGCATAGCAAACAGAGGAA...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGTAGAAGTTTATTATTaGCACCACCACCAAGATTTA +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRVEVYY*HHHQDL
Trigger: TAAATCTTGGTGGTGGTGGCAATAATAAACTTCTAC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAGTAGAAGTTTATTATTaGCACCACCACCAAGATTTA +
Preference number: 4 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAVEVYY*HHHQDL
Trigger: TAAATCTTGGTGGTGGTGGCAATAATAAACTTCTAC...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTTATAGCTCTGCTTaGTGCCTGAATCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCFYSSA*CLNPFS
Trigger: AGAAAATGGATTCAGGCAGCAAGCAGAGCTATAAAA...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATTTATGAATTTGTGTTaGGCCACATTCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRFMNLC*ATFKVV
Trigger: GACAACTTTGAATGTGGCCCAACACAAATTCATAAA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTTTCCCTGGGCCACATTaGAATAAGAAGAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLFPGPH*NKKNCL
Trigger: AAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAA...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CCA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGTGAGGTTGAAATTTTaGGTAGTCAGGGTAAAGATA +
Preference number: 4 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCVRLKF*VVRVKI
Trigger: TATCTTTACCCTGACTACCCAAAATTTCAACCTCAC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGAATCCATTTTCTGCTaGTATAAGAGAACACCACAA +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLESIFC*YKRTPQ
Trigger: TTGTGGTGTTCTCTTATAGCAGCAGAAAATGGATTC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACATTTATGAATTTGTGTTaGGCCACATTCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTFMNLC*ATFKVV
Trigger: GACAACTTTGAATGTGGCCCAACACAAATTCATAAA...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR GCA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTTCTAGATTTTCCTTCTaGTTCAAATATTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLSRFSF*FKYSSP
Trigger: GGGTGAAGAATATTTGAAGCAGAAGGAAAATCTAGA...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CCA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGATTTATGAATTTGTGTTaGGCCACATTCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRFMNLC*ATFKVV
Trigger: GACAACTTTGAATGTGGCCCAACACAAATTCATAAA...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS CCA 90 bp CTCAGGGCTGCGGGACAGCGTCTTCTCAGAAACCCGCAGCTTGGCTaGGGCCGCCAGACGCGCGTCCCTCACCCTCCCAGCGGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: LRAAGQRLLRNPQLG*GRQTRVPHPPSGAR
Trigger: CCGCGCTCCGCTGGGAGGGTGAGGGACGCGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTGAGAAGACGCTGTCCCGCAGCCCTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS CCA 90 bp CAAAGAAGCCGAGCTCTGTACCTCCATCGAGTCCTGGCTGCAGGGTaGGGGGCGACAGCCACCGCAGCCGGGAGGGTGCGGCCACCCAGT +
Preference number: 5 (lower is better)
Translates to: QRSRALYLHRVLAAG*GATATAAGRVRPPS
Trigger: ACTGGGTGGCCGCACCCTCCCGGCTGCGGTGGCTGTCGCCCCCCACCCTGCAGCCAGGACTCGATGGAGGTACAGAGCTCGGCTTCTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS GCA 90 bp AGAGCGCAGCGCAGTAGGGAGTCGCACGCCAGGGGCAAAGGGACCTaGGATCTGCGCTCCTCCGGAAGCGGGAGGATGGCTAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RAQRSRESHARGKGT*DLRSSGSGRMARRA
Trigger: GGCTCTCCTAGCCATCCTCCCGCTTCCGGAGGAGCGCAGATCGCAGGTCCCTTTGCCCCTGGCGTGCGACTCCCTACTGCGCTGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS GCA 90 bp AGCGCAGTAGGGAGTCGCACGCCAGGGGCAAAGGGACCTGCGATCTaGGCTCCTCCGGAAGCGGGAGGATGGCTAGGAGAGCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: SAVGSRTPGAKGPAI*APPEAGGWLGEPQK
Trigger: CTTCTGAGGCTCTCCTAGCCATCCTCCCGCTTCCGGAGGAGCGCAGATCGCAGGTCCCTTTGCCCCTGGCGTGCGACTCCCTACTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS CCA 90 bp GGCCATATATTGGAATGGATTCTCCATCGAGTCCTGGCTGCAGGGTaGGGGGCGACAGCCACCGCAGCCGGGAGGGTGCGGCCACCCAGT +
Preference number: 5 (lower is better)
Translates to: GHILEWILHRVLAAG*GATATAAGRVRPPS
Trigger: ACTGGGTGGCCGCACCCTCCCGGCTGCGGTGGCTGTCGCCCCCCACCCTGCAGCCAGGACTCGATGGAGAATCCATTCCAATATATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320650.9
CDS CCA 90 bp AGACTGCTGCACCAAAATGTAGGGAGCCAAGTCCCAAGGCAGCCCTaGGCAGTATGCCCATGGAGAGCAACCAGGTGGGGCCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: RLLHQNVGSQVPRQP*AVCPWRATRWGLAP
Trigger: GGGTGCCAGGCCCCACCTGGTTGCTCTCCATGGGCATACTGCCCAGGGCTGCCTTGGGACTTGGCTCCCTACATTTTGGTGCAGCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCTCAGAAACCCGCAGCTaGGCTGGGGCCGCCAGACGC +
Preference number: 5 (lower is better)
Translates to: NLCWATFKVVLGRMWPAISETRS*AGAARR
Trigger: GCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTGA...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS CCA 90 bp GTGGGGCCACTAGTTGAAACTTTTCTTGGCCTTCCTGAGCTTGACTaGGTGCAGAACTCAGCCCTCAGGGCTGCGGGACAGCGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VGPLVETFLGLPELD*VQNSALRAAGQRLL
Trigger: GAGAAGACGCTGTCCCGCAGCCCTGAGGGCTGAGTTCTGCACCCAGTCAAGCTCAGGAAGGCCAAGAAAAGTTTCAACTAGTGGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529613.5
CDS-3UTR CAA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAATTGGCCTTCCTGAGCTaGACTGGGTGCAGAACTCAG +
Preference number: 5 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQLAFLS*TGCRTQ
Trigger: CTGAGTTCTGCACCCAGTCAAGCTCAGGAAGGCCAA...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CAA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGGGGGCATCCAATCTTTaGATTTCCCTGGGCCACATT +
Preference number: 5 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWGASNL*ISLGHI
Trigger: AATGTGGCCCAGGGAAATCAAAAGATTGGATGCCCC...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAGACACAGCTGATGCCTaGAGGAGAGGGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLDTADA*RRGDRS
Trigger: TGACCTGTCCCCTCTCCTCAAGGCATCAGCTGTGTC...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCACCATAGAGTGTGGTaGCCAAACATGGAGGAATGC +
Preference number: 5 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWHHRVW*PNMEEC
Trigger: GCATTCCTCCATGTTTGGCAACCACACTCTATGGTG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 90 bp CCATATATTGGAATGGATTCTTTTCTTGGCCTTCCTGAGCTTGACTaGGTGCAGAACTCAGCCCTCAGGGCTGCGGGACAGCGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PYIGMDSFLGLPELD*VQNSALRAAGQRLL
Trigger: GAGAAGACGCTGTCCCGCAGCCCTGAGGGCTGAGTTCTGCACCCAGTCAAGCTCAGGAAGGCCAAGAAAAGAATCCATTCCAATATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CAA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGGGCTATCTGCTAACATaGATTTCTGTGCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWGYLLT*ISVLHV
Trigger: CACATGGAGCACAGAAATCAATGTTAGCAGATAGCC...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CAA 90 bp GTGGTTCCACACTGGCAGGAGCCTACCAGCATAGCTGTTGACCTGCAGCATTGGCAATACAATACGATCTaGTATGGGCTGGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: VVPHWQEPTSIAVDLQHWQYNTI*YGLAIC
Trigger: GCAGATAGCCAGCCCATACAAGATCGTATTGTATTG...CCAATGCTGCAGGTCAACAGCTATGCTGGTAGGCTCCTGCCAGTGTGGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS TCA 90 bp AGAAAAGAAGCCAGTGGAATGAGCAAGGGCAAGAGTAGTCTGAGATaGGGTCAGAAAGGTGGAGGAGAGGAGGACCTGAATCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: RKEASGMSKGKSSLR*GQKGGGEEDLNLLG
Trigger: CCCAAGCAGATTCAGGTCCTCCTCTCCTCCACCTTTCTGACCTCATCTCAGACTACTCTTGCCCTTGCTCATTCCACTGGCTTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCTCAGAAACCCGCAGCTaGGCTGGGGCCGCCAGACGC +
Preference number: 5 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSSETRS*AGAARR
Trigger: GCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTGA...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS CCA 90 bp GAGATGAGGTCAGAAAGGTGGAGGAGAGGAGGACCTGAATCTGCTTaGGGTAGCAGTGGAGATAGATACATGTGGTTAGAGTCTGGAATC +
Preference number: 5 (lower is better)
Translates to: EMRSERWRRGGPESA*GSSGDRYMWLESGI
Trigger: GATTCCAGACTCTAACCACATGTATCTATCTCCACTGCTACCCCAAGCAGATTCAGGTCCTCCTCTCCTCCACCTTTCTGACCTCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAGAACATGATGGAACATaGCTCCAAAGAGCCACATGG +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAEHDGT*LQRATW
Trigger: CCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTC...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CAA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAACTGTATCATGAATACTaGCATCTCCGGACTCAAGTG +
Preference number: 5 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQLYHEY*HLRTQV
Trigger: CACTTGAGTCCGGAGATGCAAGTATTCATGATACAG...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAGAATGGATTCTTTTCTaGGCCTTCCTGAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAEWILF*AFLSLT
Trigger: AGTCAAGCTCAGGAAGGCCAAGAAAAGAATCCATTC...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CAA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCAATACAATACGATCTaGTATGGGCTGGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: NLCWATFKVVLGRMWPAIQYNTI*YGLAIC
Trigger: GCAGATAGCCAGCCCATACAAGATCGTATTGTATTG...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCACTGTATCATGAATACTaGCATCTCCGGACTCAAGTG +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPALYHEY*HLRTQV
Trigger: CACTTGAGTCCGGAGATGCAAGTATTCATGATACAG...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCACCACATGGCCATATATaGGAATGGATTCTCCATCGA +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAPHGHI*EWILHR
Trigger: TCGATGGAGAATCCATTCCAATATATGGCCATGTGG...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320650.9
CDS CCA 90 bp TCAATTCCGGACACAGTGGGGCCACTAGTTGAAAACGATCTTGTATaGGCTGGCTATCTGCTAACATTGATTTCTGTGCTCCATGTGACG +
Preference number: 5 (lower is better)
Translates to: SIPDTVGPLVENDLV*AGYLLTLISVLHVT
Trigger: CGTCACATGGAGCACAGAAATCAATGTTAGCAGATAGCCAGCCCATACAAGATCGTTTTCAACTAGTGGCCCCACTGTGTCCGGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514653.5
CDS-3UTR CAA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: NLCWATFKVVLGRMWPAIEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp CCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCGTGATTGGACAAGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: PHSKLSWAACGLQSVIGQVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...TTGTCCAATCACGGATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTACTGGACATGCTGAGTTaGAAAGGCTCATTAGATATG +
Preference number: 5 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLLDMLS*KGSLDM
Trigger: CATATCTAATGAGCCTTTCAAACTCAGCATGTCCAG...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAAATATTGACTTGGGATaGAGCAATGCCATGGGTGAT +
Preference number: 5 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLNIDLG*SNAMGD
Trigger: ATCACCCATGGCATTGCTCAATCCCAAGTCAATATT...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 90 bp AGCAAGTTAACGCAGGCAGGCATCTCTATAGTTTTCATTCTGGAGTaGAAACTGTCCCTTAGACTCGTAGTCACACAGTTGCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SKLTQAGISIVFILE*KLSLRLVVTQLPLL
Trigger: GAGCAGAGGCAACTGTGTGACTACGAGTCTAAGGGACAGTTTTCACTCCAGAATGAAAACTATAGAGATGCCTGCCTGCGTTAACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS GCA 90 bp TCTGTGCTCCATGTGACGTCAGCAGCATGGAACATGATGGAACATTaGTCCAAAGAGCCACATGGCCATATATTGGAATGGATTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SVLHVTSAAWNMMEH*SKEPHGHILEWILH
Trigger: ATGGAGAATCCATTCCAATATATGGCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTCCATGCTGCTGACGTCACATGGAGCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCACCACATGGCCATATATaGGAATGGATTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAPHGHI*EWILFL
Trigger: CAAGAAAAGAATCCATTCCAATATATGGCCATGTGG...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CAA 90 bp CTATGCTTAGTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCCTGTATCATGAATACTaGCATCTCCGGACTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LCLVRKSMRASSQWFHTGLYHEY*HLRTQV
Trigger: CACTTGAGTCCGGAGATGCAAGTATTCATGATACAG...GCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTACTAAGCATAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CAA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGGGGCATCCAATCTTTaGATTTCCCTGGGCCACATT +
Preference number: 5 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHGASNL*ISLGHI
Trigger: AATGTGGCCCAGGGAAATCAAAAGATTGGATGCCCC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS GCA 90 bp TCTGTGCTCCATGTGACGTCAGCAGCATGGAACATGATGGAACATTaGTCCAAAGAGCCACATGGCCATATATTGGAATGGATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SVLHVTSAAWNMMEH*SKEPHGHILEWILF
Trigger: GAAAAGAATCCATTCCAATATATGGCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTCCATGCTGCTGACGTCACATGGAGCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAATTGGCCTTCCTGAGCTaGACTGGGTGCAGAACTCAG +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTELAFLS*TGCRTQ
Trigger: CTGAGTTCTGCACCCAGTCAAGCTCAGGAAGGCCAA...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCATTAGAAGACAAACTGTaGTTTGCTAGGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPALEDKL*FARMIR
Trigger: TCTGATCATCCTAGCAAACAACAGTTTGTCTTCTAA...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp GTAAGGAAGTCAATGAGAGCCAGTAGTCAGTGGTTCCACACTGGCAGGAGCCTAGTTTATGAATTTGTGTaGGGCCACATTCAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: VRKSMRASSQWFHTGRSLVYEFV*GHIQSC
Trigger: ACAACTTTGAATGTGGCCCAACACAAATTCATAAAC...TAGGCTCCTGCCAGTGTGGAACCACTGACTACTGGCTCTCATTGACTTCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp AATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCAATCCCATTAGAAGAGAGCTaGCTAATTTTAGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: NLCWATFKVVLGRMWPAIPLEES*LILDSV
Trigger: TACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGG...GATTGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp ATGAATTTGTGTTGGGCCACATTCAAAGTTGTCCTGGGCCGCATGTGGCCTGCACCATTAGAAGAGAGCTaGCTAATTTTAGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: MNLCWATFKVVLGRMWPAPLEES*LILDSV
Trigger: TACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGG...TGCAGGCCACATGCGGCCCAGGACAACTTTGAATGTGGCCCAACACAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAGGGACACAAGCTCATTaGGCTCACAGTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAGTQAH*AHSSGG
Trigger: GCCTCCAGAACTGTGAGCCAAATGAGCTTGTGTCCC...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGCTGAGGCCAGACAATaGCTTGAACCCGGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCAEARQ*LEPGRK
Trigger: CTTTCTCCCGGGTTCAAGCAATTGTCTGGCCTCAGC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAATCGGGGCTCACACCATaGCTATTTCCCAAGCAAATC +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTESGLTP*LFPKQI
Trigger: GATTTGCTTGGGAAATAGCAATGGTGTGAGCCCCGA...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAACATGACAGCCAGGATTaGAGGCCAGTTCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEHDSQD*RPVLSD
Trigger: ATCAGACAGAACTGGCCTCAAATCCTGGCTGTCATG...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTATGCCCCCTCAGCTCTaGTATTCTGTGAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLMPPQL*YSVRLQ
Trigger: CTGCAGTCTCACAGAATACAAGAGCTGAGGGGGCAT...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAAGGCCAGACAATTGCTaGAACCCGGGAGAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRRPDNC*NPGERG
Trigger: ACCTCTTTCTCCCGGGTTCAAGCAATTGTCTGGCCT...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGAACATGATGGAACATaGCTCCAAAGAGCCACATGG +
Preference number: 5 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTEHDGT*LQRATW
Trigger: CCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTC...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CAA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAGGCTATCTGCTAACATaGATTTCTGTGCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAGYLLT*ISVLHV
Trigger: CACATGGAGCACAGAAATCAATGTTAGCAGATAGCC...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAACTGTATCATGAATACTaGCATCTCCGGACTCAAGTG +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTELYHEY*HLRTQV
Trigger: CACTTGAGTCCGGAGATGCAAGTATTCATGATACAG...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TCTTTTGATTTCCCTGGGCCACATTGGAATAAGAAGAATTGTCTTGGGCCACACGTTTATGAATTTGTGTaGGGCCACATTCAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SFDFPGPHWNKKNCLGPHVYEFV*GHIQSC
Trigger: ACAACTTTGAATGTGGCCCAACACAAATTCATAAAC...GTGTGGCCCAAGACAATTCTTCTTATTCCAATGTGGCCCAGGGAAATCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGGGGCATCCAATCTTTaGATTTCCCTGGGCCACATT +
Preference number: 5 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRGASNL*ISLGHI
Trigger: AATGTGGCCCAGGGAAATCAAAAGATTGGATGCCCC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAACCACATGGCCATATATaGGAATGGATTCTCCATCGA +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEPHGHI*EWILHR
Trigger: TCGATGGAGAATCCATTCCAATATATGGCCATGTGG...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CAA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAGTAAGAAGGGTGAGGTaGAAATTTTGGGTAGTCAGG +
Preference number: 5 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAVRRVR*KFWVVR
Trigger: CCTGACTACCCAAAATTTCAACCTCACCCTTCTTAC...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 90 bp CAAATATGCCATTGGATACATAAATCTCGAGTTCAGGAATGTGTCTaGACTGGAAATAGATATGCAACTCATCAGAGTGCTCATGAGGGA +
Preference number: 5 (lower is better)
Translates to: QICHWIHKSRVQECV*TGNRYATHQSAHEG
Trigger: TCCCTCATGAGCACTCTGATGAGTTGCATATCTATTTCCAGTTCAGACACATTCCTGAACTCGAGATTTATGTATCCAATGGCATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 90 bp TGCAATAACAAACTCACTCCCTCCATAACTGCATTAATCCATTCATaGGGGCCCTGTCTAATGAAAGTGCCTAAAGAGATACCTAATTAC +
Preference number: 5 (lower is better)
Translates to: CNNKLTPSITALIHS*GPCLMKVPKEIPNY
Trigger: GTAATTAGGTATCTCTTTAGGCACTTTCATTAGACAGGGCCCTCATGAATGGATTAATGCAGTTATGGAGGGAGTGAGTTTGTTATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGAACATGATGGAACATaGCTCCAAAGAGCCACATGG +
Preference number: 5 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLEHDGT*LQRATW
Trigger: CCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS-3UTR CAA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCAGGCTATCTGCTAACATaGATTTCTGTGCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: LSYSSIRRELANFRQCSAGYLLT*ISVLHV
Trigger: CACATGGAGCACAGAAATCAATGTTAGCAGATAGCC...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS-3UTR CAA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACACTGTATCATGAATACTaGCATCTCCGGACTCAAGTG +
Preference number: 5 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTLYHEY*HLRTQV
Trigger: CACTTGAGTCCGGAGATGCAAGTATTCATGATACAG...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCAGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCTATAGGTTAGGTGCTTaGGGCCAACTGGGTATATTA +
Preference number: 5 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSYRLGA*GQLGIL
Trigger: TAATATACCCAGTTGGCCCAAAGCACCTAACCTATA...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477265.5
ENST00000514653.5
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAATATAGGTTAGGTGCTTaGGGCCAACTGGGTATATTA +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEYRLGA*GQLGIL
Trigger: TAATATACCCAGTTGGCCCAAAGCACCTAACCTATA...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477265.5
ENST00000514653.5
CDS-3UTR CAA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAAGTCAGCATCATCTTTaGAAATCAAAGTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRSQHHL*KSKWRK
Trigger: CTTCCTCCACTTTGATTTCAAAAGATGATGCTGACT...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 90 bp GACAAACTGTTGTTTGCTAGGATGATCAGATTTTCTACTGTATCATaGATACTTGCATCTCCGGACTCAAGTGAAATAACTTGTAACTCC +
Preference number: 5 (lower is better)
Translates to: DKLLFARMIRFSTVS*ILASPDSSEITCNS
Trigger: GGAGTTACAAGTTATTTCACTTGAGTCCGGAGATGCAAGTATTCATGATACAGTAGAAAATCTGATCATCCTAGCAAACAACAGTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGATTAGAAGACAAACTGTaGTTTGCTAGGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRLEDKL*FARMIR
Trigger: TCTGATCATCCTAGCAAACAACAGTTTGTCTTCTAA...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCATTAGAAGACAAACTGTaGTTTGCTAGGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTALEDKL*FARMIR
Trigger: TCTGATCATCCTAGCAAACAACAGTTTGTCTTCTAA...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGAAATGCCGAGTGTTTaGTTATGTCTAAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLEMPSV*LCLSSR
Trigger: TCTGCTGCTTAGACATAACAAAACACTCGGCATTTC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp GTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: VHLIQGLIIFLTEKLVLTVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...TGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAGGTCTGATCATCTTCTaGACAGAAAAACTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRGLIIF*TEKLVL
Trigger: CAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACC...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp CCTTCATTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAGGTCTGATCATCTTCTaGACAGAAAAACTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: PSFLRVHLIQGLIIFLTEGLIIF*TEKLVL
Trigger: CAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACC...TTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAATGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGAAGTAGAAGTTTATTATaGCCACCACCACCAAGATTT +
Preference number: 5 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRSRSLL*PPPPRF
Trigger: AAATCTTGGTGGTGGTGGCAATAATAAACTTCTACT...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp ACTTGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCGTTTATGAATTTGTGTaGGGCCACATTCAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: TCFDSTFEMPSVLLCLSSVYEFV*GHIQSC
Trigger: ACAACTTTGAATGTGGCCCAACACAAATTCATAAAC...GCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp TGTTTTGACAGCACATTTGAAATGCCGAGTGTTTTGTTATGTCTAAGCAGCAGACCATTAGAAGAGAGCTaGCTAATTTTAGACAGTGTA +
Preference number: 5 (lower is better)
Translates to: CFDSTFEMPSVLLCLSSRPLEES*LILDSV
Trigger: TACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGG...TCTGCTGCTTAGACATAACAAAACACTCGGCATTTCAAATGTGCTGTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp CATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTTTTGACAGCATGGCAGAACACAATCTaGATTTCAGAAAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: HLIQGLIIFLTEKLVLTAWQNTI*ISERKM
Trigger: CATCTTTCTTTCTGAAATCAAGATTGTGTTCTGCCA...TGCTGTCAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp CTTTCTTACAGTTCCATTAGAAGAGAGCTTGCTAATTTTAGACAGTGTAGTGCATTAGAAGACAAACTGTaGTTTGCTAGGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: LSYSSIRRELANFRQCSALEDKL*FARMIR
Trigger: TCTGATCATCCTAGCAAACAACAGTTTGTCTTCTAA...TGCACTACACTGTCTAAAATTAGCAAGCTCTCTTCTAATGGAACTGTAAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS-3UTR CAA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAGTTTTGACAGCACATTaGAAATGCCGAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRVLTAH*KCRVFC
Trigger: ACAAAACACTCGGCATTTCAAATGTGCTGTCAAAAC...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
CDS-3UTR CAA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTGGTCTGATCATCTTCTaGACAGAAAAACTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCGLIIF*TEKLVL
Trigger: CAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACC...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGTAGTAGAAGTTTATTATaGCCACCACCACCAAGATTT +
Preference number: 5 (lower is better)
Translates to: SKSSSDPRSDHLLDRKTCSRSLL*PPPPRF
Trigger: AAATCTTGGTGGTGGTGGCAATAATAAACTTCTACT...ACAAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS TCA 90 bp TGCATCATCCATTCATTCAAACCACTAGAAAAGACAAGCCGAGACTaGATAGAATATAGAGACTATAAGACAACATCACTTTCCTTGATT +
Preference number: 5 (lower is better)
Translates to: CIIHSFKPLEKTSRD*IEYRDYKTTSLSLI
Trigger: AATCAAGGAAAGTGATGTTGTCTTATAGTCTCTATATTCTATTCAGTCTCGGCTTGTCTTTTCTAGTGGTTTGAATGAATGGATGATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS-3UTR CAA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTTTAGAAGACAAACTGTaGTTTGCTAGGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLLEDKL*FARMIR
Trigger: TCTGATCATCCTAGCAAACAACAGTTTGTCTTCTAA...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp TTTCTAAGAGTTCATCTGATCCAAGGTCTGATCATCTTCTTGACAGAAAAACTTGGTCTGATCATCTTCTaGACAGAAAAACTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: FLRVHLIQGLIIFLTEKLGLIIF*TEKLVL
Trigger: CAAAACAAGTTTTTCTGTCAAGAAGATGATCAGACC...AAGTTTTTCTGTCAAGAAGATGATCAGACCTTGGATCAGATGAACTCTTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
ENST00000529613.5
CDS-3UTR CAA 90 bp ACTGATAACAAATTCTTCCTCTGTTTGCTATGCTTAGTAAGGAAGTCAATGAGAAGTAGAAGTTTATTATaGCCACCACCACCAAGATTT +
Preference number: 5 (lower is better)
Translates to: TDNKFFLCLLCLVRKSMRSRSLL*PPPPRF
Trigger: AAATCTTGGTGGTGGTGGCAATAATAAACTTCTACT...TCTCATTGACTTCCTTACTAAGCATAGCAAACAGAGGAAGAATTTGTTATCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000394159.2
CDS CCA 72 bp CGAGCTCTGTACCTCCATCGAGTCCTGGCTGCAGGGTaGGGGGCGACAGCCACCGCAGCCGGGAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: RALYLHRVLAAG*GATATAAGRVR
Trigger: CCGCACCCTCCCGGCTGCGGTGGCTGTCGCCCCCCACCCTGCAGCCAGGACTCGATGGAGGTACAGAGCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS CCA 72 bp GGGGCGCCGGACTTCGAAGGCAGTGAGCGAGTCAGCTaGGATTCCCCCGGGCGCCTGCCACCCGGAGTCCCA +
Preference number: 6 (lower is better)
Translates to: GAPDFEGSERVS*DSPGRLPPGVP
Trigger: TGGGACTCCGGGTGGCAGGCGCCCGGGGGAATCCCAGCTGACTCGCTCACTGCCTTCGAAGTCCGGCGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320650.9
CDS CAA 90 bp CAGCCCTCAGGGCTGCGGGACAGCGTCTTCTCAGAAACCCGCAGCTaGGCTGGGGCCGCCAGACGCGCGTCCCTCACCCTCCCAGCGGAG +
Preference number: 6 (lower is better)
Translates to: QPSGLRDSVFSETRS*AGAARRASLTLPAE
Trigger: CTCCGCTGGGAGGGTGAGGGACGCGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTGAGAAGACGCTGTCCCGCAGCCCTGAGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS CCA 72 bp GCGGGACAGCGTCTTCTCAGAAACCCGCAGCTTGGCTaGGGCCGCCAGACGCGCGTCCCTCACCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: AGQRLLRNPQLG*GRQTRVPHPPS
Trigger: GCTGGGAGGGTGAGGGACGCGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTGAGAAGACGCTGTCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS CCA 72 bp GGCTGCGGGACAGCGTCTTCTCAGAAACCCGCAGCTTaGCTGGGGCCGCCAGACGCGCGTCCCTCACCCTCC +
Preference number: 6 (lower is better)
Translates to: GCGTASSQKPAA*LGPPDARPSPS
Trigger: GGAGGGTGAGGGACGCGCGTCTGGCGGCCCCAGCCAAGCTGCGGGTTTCTGAGAAGACGCTGTCCCGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS GCA 72 bp GGGAGTCGCACGCCAGGGGCAAAGGGACCTGCGATCTaGGCTCCTCCGGAAGCGGGAGGATGGCTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: GSRTPGAKGPAI*APPEAGGWLGE
Trigger: CTCTCCTAGCCATCCTCCCGCTTCCGGAGGAGCGCAGATCGCAGGTCCCTTTGCCCCTGGCGTGCGACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS GCA 72 bp CGCAGTAGGGAGTCGCACGCCAGGGGCAAAGGGACCTaGGATCTGCGCTCCTCCGGAAGCGGGAGGATGGCT +
Preference number: 6 (lower is better)
Translates to: RSRESHARGKGT*DLRSSGSGRMA
Trigger: AGCCATCCTCCCGCTTCCGGAGGAGCGCAGATCGCAGGTCCCTTTGCCCCTGGCGTGCGACTCCCTACTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000529613.5
CDS CCA 72 bp TTGGAATGGATTCTCCATCGAGTCCTGGCTGCAGGGTaGGGGGCGACAGCCACCGCAGCCGGGAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: LEWILHRVLAAG*GATATAAGRVR
Trigger: CCGCACCCTCCCGGCTGCGGTGGCTGTCGCCCCCCACCCTGCAGCCAGGACTCGATGGAGAATCCATTCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320650.9
CDS CCA 72 bp TCCATGAGGCACCGCCCTGTTGGGGGCTCTCTGTGGTaGTTCTACCCCTGTGCAAAGTCTCTGCCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: SMRHRPVGGSLW*FYPCAKSLPVP
Trigger: GGGCACAGGCAGAGACTTTGCACAGGGGTAGAACCACCACAGAGAGCCCCCAACAGGGCGGTGCCTCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 72 bp CACCAAAATGTAGGGAGCCAAGTCCCAAGGCAGCCCTaGGCAGTATGCCCATGGAGAGCAACCAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: HQNVGSQVPRQP*AVCPWRATRWG
Trigger: GCCCCACCTGGTTGCTCTCCATGGGCATACTGCCCAGGGCTGCCTTGGGACTTGGCTCCCTACATTTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 72 bp TTTCCTTTCACTCCATATTCTGCATCCTGGGCACACTaGGTGGGGGTTGGACCCCTAAGGCCTCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: FPFTPYSASWAH*VGVGPLRPQAA
Trigger: AGCTGCCTGAGGCCTTAGGGGTCCAACCCCCACCCAGTGTGCCCAGGATGCAGAATATGGAGTGAAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 72 bp CAGTTCTGGAGGCTGGGAAGTACAAGTGCATGGCACTaGCATCTGCTAAGGGTCATCCTGTGGCAGAAGGGT +
Preference number: 6 (lower is better)
Translates to: QFWRLGSTSAWH*HLLRVILWQKG
Trigger: ACCCTTCTGCCACAGGATGACCCTTAGCAGATGTCAGTGCCATGCACTTGTACTTCCCAGCCTCCAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp ATATTGGAATGGATTCTTTTCTTGGCCTTCCTGAGCTaGACTGGGTGCAGAACTCAGCCCTCAGGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: ILEWILFLAFLS*TGCRTQPSGLR
Trigger: CCGCAGCCCTGAGGGCTGAGTTCTGCACCCAGTCAAGCTCAGGAAGGCCAAGAAAAGAATCCATTCCAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296545.11
CDS TCA 72 bp TCTCACTGCAAGGTGACTGCTGACTCATGGCAGCACTaGAATCCTAGCAGGATGGTACTGCCCAGGGAAAAT +
Preference number: 6 (lower is better)
Translates to: SHCKVTADSWQH*NPSRMVLPREN
Trigger: ATTTTCCCTGGGCAGTACCATCCTGCTAGGATTTCAGTGCTGCCATGAGTCAGCAGTCACCTTGCAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS GCA 72 bp ATTTGGCTCACAGTTCTGGAGGCTGGGAAGTACAAGTaGATGGCACTGACATCTGCTAAGGGTCATCCTGTG +
Preference number: 6 (lower is better)
Translates to: IWLTVLEAGKYK*MALTSAKGHPV
Trigger: CACAGGATGACCCTTAGCAGATGTCAGTGCCATGCACTTGTACTTCCCAGCCTCCAGAACTGTGAGCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 72 bp TTCCTAGGCTCAGCCTATTCTTCAGCTGTCATGGGTTaGAGTCTCATGCCTGAAGCTTTTCCAGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: FLGSAYSSAVMG*SLMPEAFPDCS
Trigger: GCTGCAGTCTGGAAAAGCTTCAGGCATGAGACTCCAACCCATGACAGCTGAAGAATAGGCTGAGCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 72 bp GAACCCATCAATTCCGGACACAGTGGGGCCACTAGTTaGAAACGATCTTGTATGGGCTGGCTATCTGCTAAC +
Preference number: 6 (lower is better)
Translates to: EPINSGHSGATS*KRSCMGWLSAN
Trigger: GTTAGCAGATAGCCAGCCCATACAAGATCGTTTTCAACTAGTGGCCCCACTGTGTCCGGAATTGATGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514653.5
CDS GCA 72 bp CAGCCTATTCTTCAGCTGTCATGGGTTGGAGTCTCATaGCTGAAGCTTTTCCAGACTGCAGCTCTACACTGT +
Preference number: 6 (lower is better)
Translates to: QPILQLSWVGVS*LKLFQTAALHC
Trigger: ACAGTGTAGAGCTGCAGTCTGGAAAAGCTTCAGGCATGAGACTCCAACCCATGACAGCTGAAGAATAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp TCTCTGCCTGTGCCCCAAATAAGTCAGCATCATCTTTaGAAATCAAAGTGGAGGAAGCCATGCCCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SLPVPQISQHHL*KSKWRKPCPLS
Trigger: GCTGAGGGGGCATGGCTTCCTCCACTTTGATTTCAAAAGATGATGCTGACTTATTTGGGGCACAGGCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp TGTGCAAAGTCTCTGCCTGTGCCCCAAATAAGTCAGCATCATCTTTaGAAATCAAAGTGGAGGAAGCCATGCCCCCTCAGCTCTTGTATT +
Preference number: 6 (lower is better)
Translates to: CAKSLPVPQISQHHL*KSKWRKPCPLSSCI
Trigger: AATACAAGAGCTGAGGGGGCATGGCTTCCTCCACTTTGATTTCAAAAGATGATGCTGACTTATTTGGGGCACAGGCAGAGACTTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 72 bp CTATTCTTCAGCTGTCATGGGTTGGAGTCTCATGCCTaGAGCTTTTCCAGACTGCAGCTCTACACTGTTAAC +
Preference number: 6 (lower is better)
Translates to: LFFSCHGLESHA*SFSRLQLYTVN
Trigger: GTTAACAGTGTAGAGCTGCAGTCTGGAAAAGCTTCAGGCATGAGACTCCAACCCATGACAGCTGAAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS GCA 72 bp CATGTGACGTCAGCAGCATGGAACATGATGGAACATTaGTCCAAAGAGCCACATGGCCATATATTGGAATGG +
Preference number: 6 (lower is better)
Translates to: HVTSAAWNMMEH*SKEPHGHILEW
Trigger: CCATTCCAATATATGGCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTCCATGCTGCTGACGTCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS GCA 72 bp ACTCATGGCAGCACTGAAATCCTAGCAGGATGGTACTaGCCAGGGAAAATACATAGTGAGGTGAGCAAGTTA +
Preference number: 6 (lower is better)
Translates to: THGSTEILAGWY*PGKIHSEVSKL
Trigger: TAACTTGCTCACCTCACTATGTATTTTCCCTGGGCAGTACCATCCTGCTAGGATTTCAGTGCTGCCATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 72 bp TGCAGCTCTACACTGTTAACCATAATTCTAGGATTTTaGTGGCAACCCCATTTCCTTGGCTCCATGAGGCAC +
Preference number: 6 (lower is better)
Translates to: CSSTLLTIILGF*WQPHFLGSMRH
Trigger: GTGCCTCATGGAGCCAAGGAAATGGGGTTGCCACCAAAATCCTAGAATTATGGTTAACAGTGTAGAGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 72 bp GACACAGTGGGGCCACTAGTTGAAAACGATCTTGTATaGGCTGGCTATCTGCTAACATTGATTTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: DTVGPLVENDLV*AGYLLTLISVL
Trigger: GAGCACAGAAATCAATGTTAGCAGATAGCCAGCCCATACAAGATCGTTTTCAACTAGTGGCCCCACTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514653.5
CDS CAA 72 bp CTGCAGCTCTACACTGTTAACCATAATTCTAGGATTTaGGTGGCAACCCCATTTCCTTGGCTCCATGAGGCA +
Preference number: 6 (lower is better)
Translates to: LQLYTVNHNSRI*VATPFPWLHEA
Trigger: TGCCTCATGGAGCCAAGGAAATGGGGTTGCCACCAAAATCCTAGAATTATGGTTAACAGTGTAGAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp CCACTAGTTGAAAACGATCTTGTATGGGCTGGCTATCTGCTAACATaGATTTCTGTGCTCCATGTGACGTCAGCAGCATGGAACATGATG +
Preference number: 6 (lower is better)
Translates to: PLVENDLVWAGYLLT*ISVLHVTSAAWNMM
Trigger: CATCATGTTCCATGCTGCTGACGTCACATGGAGCACAGAAATCAATGTTAGCAGATAGCCAGCCCATACAAGATCGTTTTCAACTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514653.5
CDS TCA 72 bp ACGCAGGCAGGCATCTCTATAGTTTTCATTCTGGAGTaGAAACTGTCCCTTAGACTCGTAGTCACACAGTTG +
Preference number: 6 (lower is better)
Translates to: TQAGISIVFILE*KLSLRLVVTQL
Trigger: CAACTGTGTGACTACGAGTCTAAGGGACAGTTTTCACTCCAGAATGAAAACTATAGAGATGCCTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS GCA 72 bp TACATTCACCCAGTTGGCTTCTGTTTTAGGAAGCCCTaGACTGAAACAGCCCAAAATGAAGACATGAATGCC +
Preference number: 6 (lower is better)
Translates to: YIHPVGFCFRKP*TETAQNEDMNA
Trigger: GGCATTCATGTCTTCATTTTGGGCTGTTTCAGTGCAGGGCTTCCTAAAACAGAAGCCAACTGGGTGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000529613.5
CDS GCA 72 bp TACATTCACCCAGTTGGCTTCTGTTTTAGGAAGCCCTaGACTGAAACAGCTGCACAAATCTATGGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: YIHPVGFCFRKP*TETAAQIYGSQ
Trigger: TTGGGAACCATAGATTTGTGCAGCTGTTTCAGTGCAGGGCTTCCTAAAACAGAAGCCAACTGGGTGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394159.2
ENST00000477265.5
ENST00000514653.5
CDS CCA 72 bp ACATTGATTTCTGTGCTCCATGTGACGTCAGCAGCATaGAACATGATGGAACATTGCTCCAAAGAGCCACAT +
Preference number: 6 (lower is better)
Translates to: TLISVLHVTSAA*NMMEHCSKEPH
Trigger: ATGTGGCTCTTTGGAGCAATGTTCCATCATGTTCCATGCTGCTGACGTCACATGGAGCACAGAAATCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296545.11
ENST00000320650.9
ENST00000514653.5
CDS CCA 72 bp ACCACAAACTTAATTTACAAGGGACACAAGCTCATTTaGCTCACAGTTCTGGAGGCTGGGAAGTACAAGTGC +
Preference number: 6 (lower is better)
Translates to: TTNLIYKGHKLI*LTVLEAGKYKC
Trigger: GCACTTGTACTTCCCAGCCTCCAGAACTGTGAGCCAAATGAGCTTGTGTCCCTTGTAAATTAAGTTTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp CACCACAAACTTAATTTACAAGGGACACAAGCTCATTaGGCTCACAGTTCTGGAGGCTGGGAAGTACAAGTG +
Preference number: 6 (lower is better)
Translates to: HHKLNLQGTQAH*AHSSGGWEVQV
Trigger: CACTTGTACTTCCCAGCCTCCAGAACTGTGAGCCAAATGAGCTTGTGTCCCTTGTAAATTAAGTTTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp CCTACAATACAATACGATCTTGTATGGGCTGGCTATCTGCTAACATaGATTTCTGTGCTCCATGTGACGTCAGCAGCATGGAACATGATG +
Preference number: 6 (lower is better)
Translates to: PTIQYDLVWAGYLLT*ISVLHVTSAAWNMM
Trigger: CATCATGTTCCATGCTGCTGACGTCACATGGAGCACAGAAATCAATGTTAGCAGATAGCCAGCCCATACAAGATCGTATTGTATTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296545.11
ENST00000320650.9
CDS CAA 90 bp TATCTAGGAAAAAGGAAACAAGGTAAGAAGGGTGAGGTTGAAATTTaGGGTAGTCAGGGTAAAGATAGAAAGGGTGTGAGCCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: YLGKRKQGKKGEVEI*GSQGKDRKGVSPGG
Trigger: ACCACCGGGGCTCACACCCTTTCTATCTTTACCCTGACTACCCAAAATTTCAACCTCACCCTTCTTACCTTGTTTCCTTTTTCCTAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp ATAAGAGAACACCACAAACTTAATTTACAAGGGACACAAGCTCATTaGGCTCACAGTTCTGGAGGCTGGGAAGTACAAGTGCATGGCACT +
Preference number: 6 (lower is better)
Translates to: IREHHKLNLQGTQAH*AHSSGGWEVQVHGT
Trigger: AGTGCCATGCACTTGTACTTCCCAGCCTCCAGAACTGTGAGCCAAATGAGCTTGTGTCCCTTGTAAATTAAGTTTGTGGTGTTCTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp AAGTGCTTAGCCAGAAGACTCCACCATAGAGTGTGGTaGCCAAACATGGAGGAATGCAATAGAAAATGTCCT +
Preference number: 6 (lower is better)
Translates to: KCLARRLHHRVW*PNMEECNRKCP
Trigger: AGGACATTTTCTATTGCATTCCTCCATGTTTGGCAACCACACTCTATGGTGGAGTCTTCTGGCTAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp AGGAGAGGGGACAGGTCAGGAGTTTCAGTTCTGGACATGCTGAGTTaGAAAGGCTCATTAGATATGCACAAGGAAATATCAAATATGCCA +
Preference number: 6 (lower is better)
Translates to: RRGDRSGVSVLDMLS*KGSLDMHKEISNMP
Trigger: TGGCATATTTGATATTTCCTTGTGCATATCTAATGAGCCTTTCAAACTCAGCATGTCCAGAACTGAAACTCCTGACCTGTCCCCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS GCA 72 bp ATGGGTTGGAGTCTCATGCCTGAAGCTTTTCCAGACTaGAGCTCTACACTGTTAACCATAATTCTAGGATTT +
Preference number: 6 (lower is better)
Translates to: MGWSLMPEAFPD*SSTLLTIILGF
Trigger: AAATCCTAGAATTATGGTTAACAGTGTAGAGCTGCAGTCTGGAAAAGCTTCAGGCATGAGACTCCAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CCA 72 bp ACTAAGTGCTTAGCCAGAAGACTCCACCATAGAGTGTaGTTGCCAAACATGGAGGAATGCAATAGAAAATGT +
Preference number: 6 (lower is better)
Translates to: TKCLARRLHHRV*LPNMEECNRKC
Trigger: ACATTTTCTATTGCATTCCTCCATGTTTGGCAACCACACTCTATGGTGGAGTCTTCTGGCTAAGCACTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS GCA 72 bp TATTCTTCACCCAGATACTGTCGGGGCTCACACCATTaGTATTTCCCAAGCAAATCATTGCTTGTGAAAATA +
Preference number: 6 (lower is better)
Translates to: YSSPRYCRGSHH*YFPSKSLLVKI
Trigger: TATTTTCACAAGCAATGATTTGCTTGGGAAATAGCAATGGTGTGAGCCCCGACAGTATCTGGGTGAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp GACAGGTCAGGAGTTTCAGTTCTGGACATGCTGAGTTaGAAAGGCTCATTAGATATGCACAAGGAAATATCA +
Preference number: 6 (lower is better)
Translates to: DRSGVSVLDMLS*KGSLDMHKEIS
Trigger: TGATATTTCCTTGTGCATATCTAATGAGCCTTTCAAACTCAGCATGTCCAGAACTGAAACTCCTGACCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp AAAAGGAAACAAGGTAAGAAGGGTGAGGTTGAAATTTaGGGTAGTCAGGGTAAAGATAGAAAGGGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: KRKQGKKGEVEI*GSQGKDRKGVS
Trigger: GCTCACACCCTTTCTATCTTTACCCTGACTACCCAAAATTTCAACCTCACCCTTCTTACCTTGTTTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp ATATTCTTCACCCAGATACTGTCGGGGCTCACACCATaGCTATTTCCCAAGCAAATCATTGCTTGTGAAAAT +
Preference number: 6 (lower is better)
Translates to: IFFTQILSGLTP*LFPKQIIACEN
Trigger: ATTTTCACAAGCAATGATTTGCTTGGGAAATAGCAATGGTGTGAGCCCCGACAGTATCTGGGTGAAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp AAGAAGACTAAGTGCTTAGCCAGAAGACTCCACCATAGAGTGTGGTaGCCAAACATGGAGGAATGCAATAGAAAATGTCCTCAAAAGTAT +
Preference number: 6 (lower is better)
Translates to: KKTKCLARRLHHRVW*PNMEECNRKCPQKY
Trigger: ATACTTTTGAGGACATTTTCTATTGCATTCCTCCATGTTTGGCAACCACACTCTATGGTGGAGTCTTCTGGCTAAGCACTTAGTCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 90 bp CTGCTTCAAATATTCTTCACCCAGATACTGTCGGGGCTCACACCATaGCTATTTCCCAAGCAAATCATTGCTTGTGAAAATAACTGTAAA +
Preference number: 6 (lower is better)
Translates to: LLQIFFTQILSGLTP*LFPKQIIACENNCK
Trigger: TTTACAGTTATTTTCACAAGCAATGATTTGCTTGGGAAATAGCAATGGTGTGAGCCCCGACAGTATCTGGGTGAAGAATATTTGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 72 bp CATCCTGAAGGCAAATGTTCTGCAACCACGAGCCTGTaGAATCAAAATAAGCTATCTGCTTCCAAAATACAA +
Preference number: 6 (lower is better)
Translates to: HPEGKCSATTSL*NQNKLSASKIQ
Trigger: TTGTATTTTGGAAGCAGATAGCTTATTTTGATTTCACAGGCTCGTGGTTGCAGAACATTTGCCTTCAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 72 bp TACTTATCTAAATCAAATATGGGTGTGACTTCATCCTaGAGGCAAATGTTCTGCAACCACGAGCCTGTGAAA +
Preference number: 6 (lower is better)
Translates to: YLSKSNMGVTSS*RQMFCNHEPVK
Trigger: TTTCACAGGCTCGTGGTTGCAGAACATTTGCCTTCAGGATGAAGTCACACCCATATTTGATTTAGATAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS CAA 72 bp CTGAGAGTCAGATTATATAACTATAGGTTAGGTGCTTaGGGCCAACTGGGTATATTAGCTGCATCCCAAAAT +
Preference number: 6 (lower is better)
Translates to: LRVRLYNYRLGA*GQLGILAASQN
Trigger: ATTTTGGGATGCAGCTAATATACCCAGTTGGCCCAAAGCACCTAACCTATAGTTATATAATCTGACTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477265.5
ENST00000514653.5
CDS CAA 90 bp AAAACTGAACTGAGAGTCAGATTATATAACTATAGGTTAGGTGCTTaGGGCCAACTGGGTATATTAGCTGCATCCCAAAATGAAGACATG +
Preference number: 6 (lower is better)
Translates to: KTELRVRLYNYRLGA*GQLGILAASQNEDM
Trigger: CATGTCTTCATTTTGGGATGCAGCTAATATACCCAGTTGGCCCAAAGCACCTAACCTATAGTTATATAATCTGACTCTCAGTTCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477265.5
ENST00000514653.5
CDS TCA 72 bp TATCTAGGTAATACTTATCTAAATCAAATATGGGTGTaGCTTCATCCTGAAGGCAAATGTTCTGCAACCACG +
Preference number: 6 (lower is better)
Translates to: YLGNTYLNQIWV*LHPEGKCSATT
Trigger: CGTGGTTGCAGAACATTTGCCTTCAGGATGAAGTCACACCCATATTTGATTTAGATAAGTATTACCTAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477265.5
CDS TCA 72 bp CCAGTTTACAATAGCAGTAGCCATTTCTACAGCCACTaGATATGTATCTTCAGTCTTTTAAAGAAACCATTG +
Preference number: 6 (lower is better)
Translates to: PVYNSSSHFYSH*ICIFSLLKKPL
Trigger: CAATGGTTTCTTTAAAAGACTGAAGATACATATTCAGTGGCTGTAGAAATGGCTACTGCTATTGTAAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477265.5