RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL12RB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000081985

Ensembl transcript IDs: ENST00000262345.5, ENST00000371000.5, ENST00000441640.4, ENST00000465396.1, ENST00000541374.6, ENST00000544434.5, ENST00000648487.1, ENST00000674203.2

Found 773 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTTTCGGGCTTTaGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAG +
Preference number: 1 (lower is better)
Translates to: TCWEHRPGTGWVFGL*VGAPALQHLVQIHQ
Trigger: CTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR GCA 90 bp CCGTCCAGGGACAGGCTGGGTTTTCGGGCTTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: PSRDRLGFRALGRSP*SPAPCTDPPVVCSQ
Trigger: CTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR CCA 90 bp GTGAGGGGAGGTCATCTATGTTGGAGGGTAAGTAGCCATCATGGGTaGGAAGGTCACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: VRGGHLCWRVSSHHG*EGHLLGAPSRDRLG
Trigger: ACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCCACCCATGATGGCTACTTACCCTCCAACATAGATGACCTCCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR GCA 90 bp AGTGAAGACCAACTCCCAGTTCCTAAGACTCCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGA +
Preference number: 1 (lower is better)
Translates to: SEDQLPVPKTPPELA*LSSSCSQTDGGTQR
Trigger: TCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCTTAGGAACTGGGAGTTGGTCTTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR CCA 90 bp CTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGTGGGCTTGAGGCACTGTGCATCATG +
Preference number: 1 (lower is better)
Translates to: LSSTLYRSTSCLLSA*RALGGGGLEALCIM
Trigger: CATGATGCACAGTGCCTCAAGCCCACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR TCA 90 bp GCCAGTCAAGGGCATGTCCTGGGTACAGGCAAGCTACAGCGATGCTaGGAGGAAAGGAACCATTGGGGGTGCCGCACAATAATAGCTAAA +
Preference number: 1 (lower is better)
Translates to: ASQGHVLGTGKLQRC*EERNHWGCRTIIAK
Trigger: TTTAGCTATTATTGTGCGGCACCCCCAATGGTTCCTTTCCTCTCAGCATCGCTGTAGCTTGCCTGTACCCAGGACATGCCCTTGACTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR GCA 90 bp GGTAGCTACTATGGACCAGGCATGATGCTGGTGCTGGGGAAACACTaGCAAAGTTCCTGCTTTCAAGTTGTCTGCAGTCCAACAGAGAAA +
Preference number: 1 (lower is better)
Translates to: GSYYGPGMMLVLGKH*QSSCFQVVCSPTEK
Trigger: TTTCTCTGTTGGACTGCAGACAACTTGAAAGCAGGAACTTTGGCAGTGTTTCCCCAGCACCAGCATCATGCCTGGTCCATAGTAGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 90 bp GAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCACTCAGAGCATaGGGGAGTCACACCTCATCTTTAACTGATCCAGAGTCAGCTTAT +
Preference number: 1 (lower is better)
Translates to: EGTLTLRLEASPLRA*GSHTSSLTDPESAY
Trigger: ATAAGCTGACTCTGGATCAGTTAAAGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR GCA 90 bp CCAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTaGCCAAGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCT +
Preference number: 1 (lower is better)
Translates to: PALYKTPEIQSGRLG*PRYYGTMVSLQYRS
Trigger: AGACCTATATTGTAAACTCACCATAGTACCATAGTACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR GCA 90 bp GGACCAGGCATGATGCTGGTGCTGGGGAAACACTGCCAAAGTTCCTaGTTTCAAGTTGTCTGCAGTCCAACAGAGAAAGTAAGTATATGG +
Preference number: 1 (lower is better)
Translates to: GPGMMLVLGKHCQSS*FQVVCSPTEKVSIW
Trigger: CCATATACTTACTTTCTCTGTTGGACTGCAGACAACTTGAAAGCAGGAACTTTGGCAGTGTTTCCCCAGCACCAGCATCATGCCTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 90 bp TTCAGAGTGGGAGGCTGGGTTGCCCAAGGTACTATGGTACTATGGTaGGTTTACAATATAGGTCTTCACCATCCAGCTGCCCTTGATTTG +
Preference number: 1 (lower is better)
Translates to: FRVGGWVAQGTMVLW*VYNIGLHHPAALDL
Trigger: CAAATCAAGGGCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCTTGGGCAACCCAGCCTCCCACTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CCA 90 bp TCCATGTTGTGGAAAAGAGAGTTATCTTCCAGGCTCAACTTGAGCTaGCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTG +
Preference number: 1 (lower is better)
Translates to: SMLWKRELSSRLNLS*QRTSSISSPGMKAV
Trigger: CACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAACTCTCTTTTCCACAACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 90 bp CCTGAAGAAGCAGAGCAACTGTCCATCGCTCAGTTTCTAGAGCTCTaGGGGAAATCTGGAAAACCTAAAGCCCGAGAACAGTTATTTCTA +
Preference number: 1 (lower is better)
Translates to: PEEAEQLSIAQFLEL*GKSGKPKAREQLFL
Trigger: TAGAAATAACTGTTCTCGGGCTTTAGGTTTTCCAGATTTCCCTCAGAGCTCTAGAAACTGAGCGATGGACAGTTGCTCTGCTTCTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR GCA 90 bp GCTGTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCT +
Preference number: 1 (lower is better)
Translates to: AVYSLLCSRCFRNSH*MNGPLDCMPLLLRA
Trigger: AGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR TCA 90 bp AAGTTTGGAATTTCAGGAAACAAGGATGTATCAAGAGTTCCAACCTaGAGAAGCAGAGCAACTGTCCATCGCTCAGTTTCTAGAGCTCTG +
Preference number: 1 (lower is better)
Translates to: KFGISGNKDVSRVPT*RSRATVHRSVSRAL
Trigger: CAGAGCTCTAGAAACTGAGCGATGGACAGTTGCTCTGCTTCTTCAGGTTGGAACTCTTGATACATCCTTGTTTCCTGAAATTCCAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CAA 90 bp CACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTTTCGGGCTTaGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCA +
Preference number: 2 (lower is better)
Translates to: HLLGAPSRDRLGFRA*GRSPCSPAPCTDPP
Trigger: TGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR TCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 2 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp CTGGAGTGCAGTGGCTCACTGCAAGCCCCACCTCCCAGGTTCATGTCATTCTCCAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: LECSGSLQAPPPRFMSFSRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...GGAGAATGACATGAACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR TCA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 2 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR GCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PRPARKRYILRLLQMRPVPPELA*LSSSCS
Trigger: GCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR CAA 90 bp TTGTCTGTCATGGTTTGTGCCAGTCAAGGGCATGTCTGTCACGGTTaGTGCCAGTCAAGGGCATGTCCTGGGTACAGGCAAGCTACAGCG +
Preference number: 2 (lower is better)
Translates to: LSVMVCASQGHVCHG*CQSRACPGYRQATA
Trigger: CGCTGTAGCTTGCCTGTACCCAGGACATGCCCTTGACTGGCACAAACCGTGACAGACATGCCCTTGACTGGCACAAACCATGACAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR GCA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTCTGCTGTGTACAGCCTaGTGTGTAGCAGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGLLCTA*CVAGAL
Trigger: TAAAGCACCTGCTACACAGCAGGCTGTACACAGCAG...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CCA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR CAA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTaGGAGGTGGTGGGCTTGAGGCACTGTGCATCATGTCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: PCTDPPVVCSQLGEL*EVVGLRHCASCLSQ
Trigger: CTGAGAAAGACATGATGCACAGTGCCTCAAGCCCACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: APCTDPPVVCSQLGELLEGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 2 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR CCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 2 (lower is better)
Translates to: ELPRPARKRYILRLLQMRQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 2 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTCTGCTGTGTAGCAGGTaGTTTAGAAATAGTCATTGC +
Preference number: 2 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGLLCSR*FRNSHC
Trigger: GCAATGACTATTTCTAAAGCACCTGCTACACAGCAG...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 2 (lower is better)
Translates to: APCTDPPVVCSQLGELLEGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACACGTCCAGGGACAGGCTaGGTTTTCGGGCTTTGGGTC +
Preference number: 2 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTRPGTG*VFGLWV
Trigger: GACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACG...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR CAA 90 bp CATTGCCAAAAGATAATAGGTTGTTCCGCTTCTGAGGAGGTGGCCTaGTCTGTCATGGTTTGTGCCAGTCAAGGGCATGTCTGTCACGGT +
Preference number: 2 (lower is better)
Translates to: HCQKIIGCSASEEVA*SVMVCASQGHVCHG
Trigger: ACCGTGACAGACATGCCCTTGACTGGCACAAACCATGACAGACAAGGCCACCTCCTCAGAAGCGGAACAACCTATTATCTTTTGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR TCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 2 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 2 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGCAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 2 (lower is better)
Translates to: FKLESLGPHSEGCNFKALQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACTGCAGCCAGACCGATaGTGGCACCCAGAGATGACA +
Preference number: 2 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLQPDR*WHPEMT
Trigger: TGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR TCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGATGAGGCATCTGAGTaGAGACCAACTCCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCDEASE*RPTPSS
Trigger: GGAACTGGGAGTTGGTCTTCACTCAGATGCCTCATC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCCAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 2 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR CAA 90 bp GGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCTCCACTAGTTaGGCAGAAGTGCCTATGGTGAAGAGACAGAGGCAGCAATGGGCT +
Preference number: 2 (lower is better)
Translates to: GKSIISSLDQDFSTS*AEVPMVKRQRQQWA
Trigger: AGCCCATTGCTGCCTCTGTCTCTTCACCATAGGCACTTCTGCCAAACTAGTGGAGAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR GCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGATCCACCAGTTGTCTaGTCTCAGCTTGGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDDPPVV*SQLGEL
Trigger: GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR CCA 90 bp GTTATCTTCCAGGCTCAACTTGAGCTGGCAGAGGACCAGCTCAATATCTTCTCCCCTCATTTCCCTTTCTaGCCAGCATACCAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: VIFQAQLELAEDQLNIFSPHFPF*PAYQES
Trigger: ACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGG...GGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CAA 90 bp TCCAAGTCCATGTTGTGGAAAAGAGAGTTATCTTCCAGGCTCAACTaGAGCTGGCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAA +
Preference number: 2 (lower is better)
Translates to: SKSMLWKRELSSRLN*SWQRTSSISSPGMK
Trigger: TTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAACTCTCTTTTCCACAACATGGACTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCTGCTGTGTACAGCCTaGTGTGTAGCAGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGLLCTA*CVAGAL
Trigger: TAAAGCACCTGCTACACAGCAGGCTGTACACAGCAG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAGTAATTTTAAGGCCCTaGGAAAGGCAAGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: ELPRPARKRYILRLLQMRVILRP*ERQDEA
Trigger: TGCCTCATCTTGCCTTTCCCAGGGCCTTAAAATTAC...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 2 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR TCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACCTCAGGAAGTTCTGTTaGACAGTACTGATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDLRKFC*TVLICC
Trigger: ACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAG...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 2 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCCTCATTTCCCTTTCTaGCCAGCATACCAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNPHFPF*PAYQES
Trigger: ACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCCTCATTTCCCTTTCTaGCCAGCATACCAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLPHFPF*PAYQES
Trigger: ACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR TCA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 2 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGTAATTTTAAGGCCCTaGGAAAGGCAAGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSVILRP*ERQDEA
Trigger: TGCCTCATCTTGCCTTTCCCAGGGCCTTAAAATTAC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 2 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGATTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 2 (lower is better)
Translates to: ELPRPARKRYILRLLQMRFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 2 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR GCA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 2 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CCA 72 bp GAGCACCGTCCAGGGACAGGCTGGGTTTTCGGGCTTTaGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAG +
Preference number: 3 (lower is better)
Translates to: EHRPGTGWVFGL*VGAPALQHLVQ
Trigger: CTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACGGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR GCA 72 bp CAACTCCCAGTTCCTAAGACTCCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGC +
Preference number: 3 (lower is better)
Translates to: QLPVPKTPPELA*LSSSCSQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCTTAGGAACTGGGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CAA 90 bp ATCATGGGTGGGAAGGTCACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTTTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: IMGGKVTCWEHRPGTGWVLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...AACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCCACCCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR CAA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 3 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSALEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR TCA 72 bp GGGCATGTCCTGGGTACAGGCAAGCTACAGCGATGCTaGGAGGAAAGGAACCATTGGGGGTGCCGCACAATA +
Preference number: 3 (lower is better)
Translates to: GHVLGTGKLQRC*EERNHWGCRTI
Trigger: TATTGTGCGGCACCCCCAATGGTTCCTTTCCTCTCAGCATCGCTGTAGCTTGCCTGTACCCAGGACATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CCA 72 bp ACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGTGGGCTTGAGGCACTG +
Preference number: 3 (lower is better)
Translates to: TLYRSTSCLLSA*RALGGGGLEAL
Trigger: CAGTGCCTCAAGCCCACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR-3UTR CAA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGTCTCAGGAAGTTCTGTaGAACAGTACTGATCTGCTG +
Preference number: 3 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWSQEVL*NSTDLL
Trigger: CAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR CCA 72 bp TGTCTGTCACGGTTTGTGCCAGTCAAGGGCATGTCCTaGGTACAGGCAAGCTACAGCGATGCTGAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: CLSRFVPVKGMS*VQASYSDAERK
Trigger: TTTCCTCTCAGCATCGCTGTAGCTTGCCTGTACCCAGGACATGCCCTTGACTGGCACAAACCGTGACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CAA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGAGAGGCCTGATGACCTaGGATTCCTTTTTCCCTTTG +
Preference number: 3 (lower is better)
Translates to: APALQHLVQIHQLSALSLRGLMT*DSFFPL
Trigger: CAAAGGGAAAAAGGAATCCAAGGTCATCAGGCCTCT...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR TCA 72 bp AAGACTTCTCCACTAGTTTGGCAGAAGTGCCTATGGTaGAGAGACAGAGGCAGCAATGGGCTAGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: KTSPLVWQKCLW*RDRGSNGLGRV
Trigger: CACCCTCCCTAGCCCATTGCTGCCTCTGTCTCTTCACCATAGGCACTTCTGCCAAACTAGTGGAGAAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CAA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 3 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
3UTR-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACTGGGTTTTCGGGCTTaGGGTCGGAGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLGFRA*GRSPCS
Trigger: AGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR CAA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACCCAGTCATGACCACCTaGGGGGCCCTTTTACCTTGG +
Preference number: 3 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDPVMTT*GALLPW
Trigger: CCAAGGTAAAAGGGCCCCCAAGGTGGTCATGACTGG...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR TCA 72 bp GGAGGCTGGGTTGCCCAAGGTACTATGGTACTATGGTaGGTTTACAATATAGGTCTTCACCATCCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: GGWVAQGTMVLW*VYNIGLHHPAA
Trigger: GGCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCTTGGGCAACCCAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 72 bp GCAGAGCAACTGTCCATCGCTCAGTTTCTAGAGCTCTaGGGGAAATCTGGAAAACCTAAAGCCCGAGAACAG +
Preference number: 3 (lower is better)
Translates to: AEQLSIAQFLEL*GKSGKPKAREQ
Trigger: CTGTTCTCGGGCTTTAGGTTTTCCAGATTTCCCTCAGAGCTCTAGAAACTGAGCGATGGACAGTTGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 72 bp CTCCCATTGCCAAAAGATAATAGGTTGTTCCGCTTCTaGGGAGGTGGCCTTGTCTGTCATGGTTTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: LPLPKDNRLFRF*GGGLVCHGLCQ
Trigger: CTGGCACAAACCATGACAGACAAGGCCACCTCCTCAGAAGCGGAACAACCTATTATCTTTTGGCAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 72 bp ACTCAGAGCATGAGGGAGTCACACCTCATCTTTAACTaGTCCAGAGTCAGCTTATCACCACAGGAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: TQSMRESHLIFN*SRVSLSPQEKV
Trigger: CACCTTCTCCTGTGGTGATAAGCTGACTCTGGATCAGTTAAAGATGAGGTGTGACTCCCTCATGCTCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR TCA 72 bp CTGACTTTAAGGCTTGAAGCCTCACCACTCAGAGCATaGGGGAGTCACACCTCATCTTTAACTGATCCAGAG +
Preference number: 3 (lower is better)
Translates to: LTLRLEASPLRA*GSHTSSLTDPE
Trigger: CTCTGGATCAGTTAAAGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGAGGCTTCAAGCCTTAAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR TCA 72 bp TGTTGTGGAAAAGAGAGTTATCTTCCAGGCTCAACTTaGGCTGGCAGAGGACCAGCTCAATATCTTCTCCGG +
Preference number: 3 (lower is better)
Translates to: CCGKESYLPGST*AGRGPAQYLLR
Trigger: CCGGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAACTCTCTTTTCCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CCA 72 bp TGGAAAAGAGAGTTATCTTCCAGGCTCAACTTGAGCTaGCAGAGGACCAGCTCAATATCTTCTCCGGGAATG +
Preference number: 3 (lower is better)
Translates to: WKRELSSRLNLS*QRTSSISSPGM
Trigger: CATTCCCGGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAACTCTCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CAA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CAA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 3 (lower is better)
Translates to: FKLESLGPHSEGCNFKALDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CAA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 3 (lower is better)
Translates to: ELPRPARKRYILRLLQMRENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR-3UTR CAA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTAGAGGCCTGATGACCTaGGATTCCTTTTTCCCTTTG +
Preference number: 3 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCRGLMT*DSFFPL
Trigger: CAAAGGGAAAAAGGAATCCAAGGTCATCAGGCCTCT...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541374.6
3UTR GCA 72 bp ATGATGCTGGTGCTGGGGAAACACTGCCAAAGTTCCTaGTTTCAAGTTGTCTGCAGTCCAACAGAGAAAGTA +
Preference number: 3 (lower is better)
Translates to: MMLVLGKHCQSS*FQVVCSPTEKV
Trigger: TACTTTCTCTGTTGGACTGCAGACAACTTGAAAGCAGGAACTTTGGCAGTGTTTCCCCAGCACCAGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CAA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACTCTCAGGAAGTTCTGTaGAACAGTACTGATCTGCTG +
Preference number: 3 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDSQEVL*NSTDLL
Trigger: CAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR GCA 72 bp CCAATGTGCCTAGTGTCTAATGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCATCATCTCAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: PMCLVSNVLDSE*RGRTFPSSQEV
Trigger: AACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTCCAGTACATTAGACACTAGGCACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR GCA 72 bp AGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGACTGTATGCCATTACTA +
Preference number: 3 (lower is better)
Translates to: SLLCSRCFRNSH*MNGPLDCMPLL
Trigger: TAGTAATGGCATACAGTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR CCA 72 bp AAACCTAAAGCCCGAGAACAGTTATTTCTACAGGACTaGGGTATGCATGGACAAGTTTTTAGTTCCTCACGT +
Preference number: 3 (lower is better)
Translates to: KPKAREQLFLQD*GMHGQVFSSSR
Trigger: ACGTGAGGAACTAAAAACTTGTCCATGCATACCCCAGTCCTGTAGAAATAACTGTTCTCGGGCTTTAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR-3UTR CAA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR GCA 72 bp GGGAAACACTGCCAAAGTTCCTGCTTTCAAGTTGTCTaGAGTCCAACAGAGAAAGTAAGTATATGGAAATCA +
Preference number: 3 (lower is better)
Translates to: GKHCQSSCFQVV*SPTEKVSIWKS
Trigger: TGATTTCCATATACTTACTTTCTCTGTTGGACTGCAGACAACTTGAAAGCAGGAACTTTGGCAGTGTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR TCA 72 bp CCAGTGTCTTTTATGTCTTCATCTATAGAACTAGGTTaGTTTGTTTTGAAGGCTCTCAATAATCTAGGAGCC +
Preference number: 3 (lower is better)
Translates to: PVSFMSSSIELG*FVLKALNNLGA
Trigger: GGCTCCTAGATTATTGAGAGCCTTCAAAACAAATCAACCTAGTTCTATAGATGAAGACATAAAAGACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR-3UTR CAA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAATGTTCCAAGTCCATGTaGTGGAAAAGAGAGTTATCT +
Preference number: 3 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQCSKSM*WKRELS
Trigger: AGATAACTCTCTTTTCCACAACATGGACTTGGAACA...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCGTGGCCCCGGTGCTCTaGGCCGCACGTGTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: GAPALQHLVQIHQLSALSVAPVL*AARVAL
Trigger: GAGCGCGACACGTGCGGCCCAGAGCACCGGGGCCAC...GCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGCTCACTGCAAGCCCCACCTCCCAGGTTCATGTCATTCTCCGTGGCCCCGGTGCTCTaGGCCGCACGTGTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LECSGSLQAPPPRFMSFSVAPVL*AARVAL
Trigger: GAGCGCGACACGTGCGGCCCAGAGCACCGGGGCCAC...GGAGAATGACATGAACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGTGGCCCCGGTGCTCTaGGCCGCACGTGTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQLSALSLVAPVL*AARVAL
Trigger: GAGCGCGACACGTGCGGCCCAGAGCACCGGGGCCAC...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCGTGGGACCGGGTGGCCCCGGTaGTCTGGGCCGCACGTGTCG +
Preference number: 4 (lower is better)
Translates to: HLMKDFTDDQRFRIFRRGTGWPR*SGPHVS
Trigger: CGACACGTGCGGCCCAGAGCACCGGGGCCACCCGGT...CCCACGCCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCCGTCCAGGGACAGGCTaGGTTTTCGGGCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSRPGTG*VFGLWV
Trigger: GACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACG...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACACCGGGTGGCCCCGGTaGTCTGGGCCGCACGTGTCG +
Preference number: 4 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNTGWPR*SGPHVS
Trigger: CGACACGTGCGGCCCAGAGCACCGGGGCCACCCGGT...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp ATCATGGGTGGGAAGGTCACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTGTCCTCTTTCCCAGGTaGAGGCCACAGTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: IMGGKVTCWEHRPGTGWVVLFPR*RPQSPV
Trigger: AACAGGGGACTGTGGCCTGCACCTGGGAAAGAGGAC...AACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCCACCCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGTCCTCTTTCCCAGGTaGAGGCCACAGTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSVLFPR*RPQSPV
Trigger: AACAGGGGACTGTGGCCTGCACCTGGGAAAGAGGAC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp ATCATGGGTGGGAAGGTCACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTCTGCAGCCAGACCGATaGTGGCACCCAGAGATGACA +
Preference number: 4 (lower is better)
Translates to: IMGGKVTCWEHRPGTGWVLQPDR*WHPEMT
Trigger: TGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAG...AACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCCACCCATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR TCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGTCTCTGCTACACCACTaGGGTCTGAGGGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWSLLHH*GLRAAR
Trigger: CCTAGCAGCCCTCAGACCTCAGTGGTGTAGCAGAGA...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCACCGGGTGGCCCCGGTaGTCTGGGCCGCACGTGTCG +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVTGWPR*SGPHVS
Trigger: CGACACGTGCGGCCCAGAGCACCGGGGCCACCCGGT...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCAGGAGGCAGCCCATTTaGTCCTGGACTGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSRRQPI*SWTGML
Trigger: CAGCATTCCAGTCCAGGAGCAAATGGGCTGCCTCCT...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR CCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGGATTCTGCCACCTGTaGGCTCTGCTGTGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWGFCHL*ALLCRL
Trigger: AAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSQRDLS*EAAKSP
Trigger: TGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTG...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGGAAGACCTGTGACTTaGGAATTGAGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSGRPVT*ELREWP
Trigger: TGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCTCCTCCTTGATCCCCTaGGAGTGCATACACACGGAT +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSSSLIP*ECIHTD
Trigger: ATCCGTGTGTATGCACTCTCAGGGGATCAAGGAGGA...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGAGCTGCATCCTCCTTaGTCCCCTGAGAGTGCATAC +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWELHPP*SPESAY
Trigger: GTATGCACTCTCAGGGGATCAAGGAGGATGCAGCTC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp ATCATGGGTGGGAAGGTCACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTTCACCACTCAGAGCATaGGGGAGTCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: IMGGKVTCWEHRPGTGWVSPLRA*GSHTSS
Trigger: AGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGA...AACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCCACCCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGATCCACCAGTTGTCTaGTCTCAGCTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSDPPVV*SQLGEL
Trigger: GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCATGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGTGGGCGCGGGGAGCTaGCGGCGAGTGAGGATCGGG +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACVGAGS*RRVRIG
Trigger: CCCGATCCTCACTCGCCGCCAGCTCCCCGCGCCCAC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGCTCACTGCAAGCCCCACCTCCCAGGTTCATGTCATTCTCCGAGTTTGCAGAGACCTaGCGAGGAGCCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: LECSGSLQAPPPRFMSFSEFAET*RGASNP
Trigger: AGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTC...GGAGAATGACATGAACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTTGGGTTTTCGGGCTTTaGGTCGGAGCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLWVFGL*VGAPAL
Trigger: GAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCA...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCACGTCCAGGGACAGGCTaGGTTTTCGGGCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPRPGTG*VFGLWV
Trigger: GACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACG...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGTCAAGGGCATGTCCTaGGTACAGGCAAGCTACAGC +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWVKGMS*VQASYS
Trigger: GCTGTAGCTTGCCTGTACCCAGGACATGCCCTTGAC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGGAAGACCTGTGACTTaGGAATTGAGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDGRPVT*ELREWP
Trigger: TGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCGAGCTGCATCCTCCTTaGTCCCCTGAGAGTGCATAC +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCELHPP*SPESAY
Trigger: GTATGCACTCTCAGGGGATCAAGGAGGATGCAGCTC...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTTCTCTGCTACACCACTaGGGTCTGAGGGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLSLLHH*GLRAAR
Trigger: CCTAGCAGCCCTCAGACCTCAGTGGTGTAGCAGAGA...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGAGAGGTGCCTCATGTaGGGGGAGGTCATCTATGTT +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDERCLM*GEVIYV
Trigger: AACATAGATGACCTCCCCTCACATGAGGCACCTCTC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGAAAGGGAGATGTGCTaGGGCTCCAGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWEREMC*GSSSSR
Trigger: TCTGGAAGAACTGGAGCCTCAGCACATCTCCCTTTC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGAGAAGGTGAGTGGGTaGAGAGAACTTGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSEKVSG*RELEGK
Trigger: TTTCCCCTCAAGTTCTCTTCACCCACTCACCTTCTC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp ATCATGGGTGGGAAGGTCACCTGCTGGGAGCACCGTCCAGGGACAGGCTGGGTTGAGAAGGTGAGTGGGTaGAGAGAACTTGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: IMGGKVTCWEHRPGTGWVEKVSG*RELEGK
Trigger: TTTCCCCTCAAGTTCTCTTCACCCACTCACCTTCTC...AACCCAGCCTGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCCACCCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR TCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGATGAGGCATCTGAGTaGAGACCAACTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDDEASE*RPTPSS
Trigger: GGAACTGGGAGTTGGTCTTCACTCAGATGCCTCATC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAACCGGGTGGCCCCGGTaGTCTGGGCCGCACGTGTCG +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVTGWPR*SGPHVS
Trigger: CGACACGTGCGGCCCAGAGCACCGGGGCCACCCGGT...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR GCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTCTTCCACGTGTCGCCTaGCAGCGGGCGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCLPRVA*QRARSR
Trigger: CCGGGACCGCGCCCGCTGGCAGGCGACACGTGGAAG...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCATTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAGTTTGCAGAGACCTaGCGAGGAGCCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLEFAET*RGASNP
Trigger: AGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGAGTTTGCAGAGACCTaGCGAGGAGCCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAEFAET*RGASNP
Trigger: AGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTC...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCAGAGTTTGCAGAGACCTaGCGAGGAGCCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPEFAET*RGASNP
Trigger: AGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTC...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGTGTCACCCCCTGGATaGAGCTCTCTCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQLSALSLVSPPG*SSLHST
Trigger: GGTGGAATGGAGAGAGCTCCATCCAGGGGGTGACAC...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWCLLSA*RALGGG
Trigger: ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACA...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDCLLSA*RALGGG
Trigger: ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACA...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCTGCAGCCAGACCGATaGTGGCACCCAGAGATGACA +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLLQPDR*WHPEMT
Trigger: TGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
3UTR CAA 72 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQ*SALSLESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCGGAAGACCTGTGACTTaGGAATTGAGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCGRPVT*ELREWP
Trigger: TGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCC...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp TTTTCGGGCTTTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCTCCACCACGTACTCCTaGACAGCAGAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: FSGFGSEPLLSSTLYRSTSTTYS*TAEGSF
Trigger: GAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGA...GGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAAAGCCCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR TCA 90 bp CTGGAGTGCAGTGGCTCACTGCAAGCCCCACCTCCCAGGTTCATGTCATTCTCCTCCACCACGTACTCCTaGACAGCAGAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LECSGSLQAPPPRFMSFSSTTYS*TAEGSF
Trigger: GAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGA...GGAGAATGACATGAACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCAGGGACAGACCACTTCTaGGGACAACCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPGTDHF*GQPQRL
Trigger: CAACCTCTGAGGTTGTCCTCAGAAGTGGTCTGTCCC...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATCAGAAGTGCCTATGGTaGAGAGACAGAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDQKCLW*RDRGSN
Trigger: ATTGCTGCCTCTGTCTCTTCACCATAGGCACTTCTG...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCTTCCACGTGTCGCCTaGCAGCGGGCGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLPRVA*QRARSR
Trigger: CCGGGACCGCGCCCGCTGGCAGGCGACACGTGGAAG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATTCTTTCCTGGGAGGCTaGCAAGTCACCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDSFLGG*QVTRML
Trigger: CAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGA...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGGAGTGCAGTGGCTCACTGCAAGCCCCACCTCCCAGGTTCATGTCATTCTCCGATCCACCAGTTGTCTaGTCTCAGCTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LECSGSLQAPPPRFMSFSDPPVV*SQLGEL
Trigger: GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATC...GGAGAATGACATGAACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGTGGGCGCGGGGAGCTaGCGGCGAGTGAGGATCGGG +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGVGAGS*RRVRIG
Trigger: CCCGATCCTCACTCGCCGCCAGCTCCCCGCGCCCAC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGTGGCCCCGGTGCTCTaGGCCGCACGTGTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGVAPVL*AARVAL
Trigger: GAGCGCGACACGTGCGGCCCAGAGCACCGGGGCCAC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGTGGCCCCGGTGCTCTaGGCCGCACGTGTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTVAPVL*AARVAL
Trigger: GAGCGCGACACGTGCGGCCCAGAGCACCGGGGCCAC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQLSALSLQRDLS*EAAKSP
Trigger: TGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTG...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWSLSFP*ELSPAA
Trigger: AGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGA...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCAGCAATGCAAATGCTTaGTGCCACAAACGCCATCCA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSSNANA*CHKRHP
Trigger: TGGATGGCGTTTGTGGCACCAAGCATTTGCATTGCT...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GAPALQHLVQIHQLSALSCLLSA*RALGGG
Trigger: ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACA...GCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGAGTAGCCATCATGGGTaGGAAGGTCACCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQLSALSLSSHHG*EGHLLG
Trigger: TCCCAGCAGGTGACCTTCCCACCCATGATGGCTACT...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR TCA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGAGAGGTGCCTCATGTaGGGGGAGGTCATCTATGTT +
Preference number: 4 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAERCLM*GEVIYV
Trigger: AACATAGATGACCTCCCCTCACATGAGGCACCTCTC...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR TCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAAGGGAGATGTGCTaGGGCTCCAGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLEREMC*GSSSSR
Trigger: TCTGGAAGAACTGGAGCCTCAGCACATCTCCCTTTC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCAGATGAGGCATCTGAGTaGAGACCAACTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPDEASE*RPTPSS
Trigger: GGAACTGGGAGTTGGTCTTCACTCAGATGCCTCATC...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCCCATATTCCAGAGCCTaGTGTTACTGGGCCGATATC +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCPYSRA*CYWADI
Trigger: GATATCGGCCCAGTAACAGCAGGCTCTGGAATATGG...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp GGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTCTTTCCTGGGAGGCTaGCAAGTCACCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GAPALQHLVQIHQLSALSSFLGG*QVTRML
Trigger: CAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGA...GCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGCTGTGTCTTCTCCTTaGAGACAAAATTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSAVSSP*RQNSLS
Trigger: TGAGAGGGAATTTTGTCTGCAAGGAGAAGACACAGC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR CCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGAGTTTGCAGAGACCTaGCGAGGAGCCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVEFAET*RGASNP
Trigger: AGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTC...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGTGGGGGCCACTCAGTaGTGCTTTGTGCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLVGATQ*CFVLRV
Trigger: AACTCTAAGCACAAAGCACCACTGAGTGGCCCCCAC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCCGCTTCTGAGGAGGTaGCCTTGTCTGTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLPLLRR*PCLSWF
Trigger: AAACCATGACAGACAAGGCCACCTCCTCAGAAGCGG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: GAPALQHLVQIHQLSALSECGWK*RGASKT
Trigger: AGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTC...GCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGTCCTCCTTGATCCCCTaGGAGTGCATACACACGGAT +
Preference number: 4 (lower is better)
Translates to: PALQHLVQIHQLSALSLESSLIP*ECIHTD
Trigger: ATCCGTGTGTATGCACTCTCAGGGGATCAAGGAGGA...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp TCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCGGAATTTCACAGAGCTaGGGCTGGGAGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SPAPCTDPPVVCSQLGELGISQS*GWELES
Trigger: GGACTCCAACTCCCAGCCTCAGCTCTGTGAAATTCC...GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGCTCAGGAAGTTCTGTTaGACAGTACTGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWLRKFC*TVLICC
Trigger: ACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAG...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGCTGCCCTTGATTTGCTaGAAGAGGATGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWLPLIC*KRMKPK
Trigger: TTTTGGCTTCATCCTCTTTCAGCAAATCAAGGGCAG...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACCTTCCAGGCTCAACTTaGGCTGGCAGAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNLPGST*AGRGPA
Trigger: AGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAG...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GGTCCAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAATATGGAAATCATGCTaGGGAGGCCTCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GPALYKTPEIQSGRLGCPIWKSC*GGLSIL
Trigger: AAGGATGCTGAGGCCTCCTCAGCATGATTTCCATAT...TGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTGTCCTCTTTCCCAGGTaGAGGCCACAGTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGVLFPR*RPQSPV
Trigger: AACAGGGGACTGTGGCCTGCACCTGGGAAAGAGGAC...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTCCATATTCCAGAGCCTaGTGTTACTGGGCCGATATC +
Preference number: 4 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGPYSRA*CYWADI
Trigger: GATATCGGCCCAGTAACAGCAGGCTCTGGAATATGG...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCATCTTTCCTGGGAGGCTaGCAAGTCACCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPSFLGG*QVTRML
Trigger: CAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGA...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTAGGAGGCAGCCCATTTaGTCCTGGACTGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSRRQPI*SWTGML
Trigger: CAGCATTCCAGTCCAGGAGCAAATGGGCTGCCTCCT...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGGTGTCACCCCCTGGATaGAGCTCTCTCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRVSPPG*SSLHST
Trigger: GGTGGAATGGAGAGAGCTCCATCCAGGGGGTGACAC...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGCTGTGTGTCACCCCCTaGATGGAGCTCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVLCVTP*MELSPF
Trigger: GAATGGAGAGAGCTCCATCCAGGGGGTGACACACAG...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGGTGATGGCATTAATGTaGGGGCCACTCAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PALQHLVQIHQLSALSLEVMALM*GPLSGA
Trigger: AGCACCACTGAGTGGCCCCCACATTAATGCCATCAC...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTCAGGATCTTCAGGCGTaGGCCAGTCTATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGQDLQA*ASLSGA
Trigger: GGCTCCTGATAGACTGGCCCACGCCTGAAGATCCTG...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCGTCCAGGGACAGGCTaGGTTTTCGGGCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGARPGTG*VFGLWV
Trigger: GACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGGGAAGGTCACCTGCTaGGAGCACCGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACGKVTC*EHRPGT
Trigger: TGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGTAATTTTAAGGCCCTaGGAAAGGCAAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWVILRP*ERQDEA
Trigger: TGCCTCATCTTGCCTTTCCCAGGGCCTTAAAATTAC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCGAAATTGGATTCAGGTaGTTCAGGGGTGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCEIGFR*FRGEVD
Trigger: ATCAACCTCACCCCTGAATCACCTGAATCCAATTTC...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSAVYWM*ILGDSV
Trigger: TACAGAGTCTCCCAAAATTCACATCCAATAAACAGC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTGGTGGACCCCAGGCTTaGCAGGAATTTAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGGGPQA*QEFKKK
Trigger: CTTTTTCTTAAATTCCTGTCAAGCCTGGGGTCCACC...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCGCACGCATCTATTTTTaGTTTAATCAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSARIYF*FNQQPR
Trigger: ACGTGGCTGTTGATTAAAGCAAAAATAGATGCGTGC...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTATGTCACTCGGGGCTaGAGGCTGTTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAYVTRG*RLFIGC
Trigger: ACATCCAATAAACAGCCTGCAGCCCCGAGTGACATA...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp TCCAGTTCTTCCAGAGAGTCAGCGAGAGGTGCCTCATGTGAGGGGAGGTCATCTGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSSSRESARGASCEGRSSGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...AGATGACCTCCCCTCACATGAGGCACCTCTCGCTGACTCTCTGGAAGAACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR GCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGATCCACCAGTTGTCTaGTCTCAGCTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLEDPPVV*SQLGEL
Trigger: GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATC...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTACCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVPPELA*LSSSCS
Trigger: GCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGG...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTACAGCCATAGAGACGTaGCACTTTGTTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLTAIET*HFVDSH
Trigger: ATGGCTGTCAACAAAGTGCCACGTCTCTATGGCTGT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGATTTTGAGGCTGTTCTaGAGCAACACCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWILRLF*SNTNED
Trigger: ATCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAAT...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRQRDLS*EAAKSP
Trigger: TGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTG...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGTGTCACCCCCTGGATaGAGCTCTCTCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVVSPPG*SSLHST
Trigger: GGTGGAATGGAGAGAGCTCCATCCAGGGGGTGACAC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCGTGTCACCCCCTGGATaGAGCTCTCTCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAVSPPG*SSLHST
Trigger: GGTGGAATGGAGAGAGCTCCATCCAGGGGGTGACAC...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTGGGGGCCACTCAGTaGTGCTTTGTGCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVVGATQ*CFVLRV
Trigger: AACTCTAAGCACAAAGCACCACTGAGTGGCCCCCAC...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATCAAACGCCATCCAATTaGCTTTACCTTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDQTPSN*LYLADK
Trigger: TTTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTG...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGCTATTTGCTGGATCTaGAATTTCTCTGCTACACCA +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDAICWI*NFSATP
Trigger: TGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCAGGATCTTCAGGCGTaGGCCAGTCTATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAQDLQA*ASLSGA
Trigger: GGCTCCTGATAGACTGGCCCACGCCTGAAGATCCTG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PLLSSTLYRSTSCLLSAWGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...CCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACGTCCAGGGACAGGCTaGGTTTTCGGGCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRRPGTG*VFGLWV
Trigger: GACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACG...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGGGAAGGTCACCTGCTaGGAGCACCGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCGKVTC*EHRPGT
Trigger: TGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGGCCATGGTGAAAATTaGTTCTTCTGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDGHGEN*FFCQTC
Trigger: ACAAGTTTGACAGAAGAATCAATTTTCACCATGGCC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACGGAAGACCTGTGACTTaGGAATTGAGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNGRPVT*ELREWP
Trigger: TGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCC...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: GAPALQHLVQIHQLSALSCLCSQ*FTPITP
Trigger: TGGAGTGATTGGAGTGAATCATTGAGAGCACAAACA...GCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCTGGAAGTAATGCGTTaGGAAAATGCCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLLEVMR*ENAHHD
Trigger: ATCATGGTGGGCATTTTCTCAACGCATTACTTCCAG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACGAAAGGGAGATGTGCTaGGGCTCCAGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNEREMC*GSSSSR
Trigger: TCTGGAAGAACTGGAGCCTCAGCACATCTCCCTTTC...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTCAGTTTCTAGAGCTCTaGGGGAAATCTGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGQFLEL*GKSGKP
Trigger: AGGTTTTCCAGATTTCCCTCAGAGCTCTAGAAACTG...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGCTCGGGTGGGATTCTaGCACCTGTGGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLARVGF*HLWALL
Trigger: CAGCAGAGCCCACAGGTGGCAGAATCCCACCCGAGC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCTCCTCTAAAAGTATGTaGCATCAACAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSSSKSM*HQQSTL
Trigger: CAGAGTTGATTGTTGATGGCACATACTTTTAGAGGA...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAGTCCTCTTTCCCAGGTaGAGGCCACAGTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRVLFPR*RPQSPV
Trigger: AACAGGGGACTGTGGCCTGCACCTGGGAAAGAGGAC...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCAATAAAGGGTACATCTaGTCACAGAAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSNKGYI*SQKPFE
Trigger: TTCAAAAGGCTTCTGTGAGCAGATGTACCCTTTATT...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGCCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALPPELA*LSSSCS
Trigger: GCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGG...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGGAGTGCAGTGGCTCACTGCAAGCCCCACCTCCCAGGTTCATGTCATTCTCCCTGCTGTGTAGCAGGTaGTTTAGAAATAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: LECSGSLQAPPPRFMSFSLLCSR*FRNSHC
Trigger: GCAATGACTATTTCTAAAGCACCTGCTACACAGCAG...GGAGAATGACATGAACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGATTGCCCAGGCTGGAGTaGAGTGGCTCACTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARLPRLE*SGSLQA
Trigger: GGCTTGCAGTGAGCCACTGCACTCCAGCCTGGGCAA...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACTTCTCAGTTCAGCTCTaGAAGCGCAGCCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDFSVQL*KRSRAG
Trigger: GCCCGCCCGGCTGCGCTTCCAGAGCTGAACTGAGAA...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAGTGTCACCCCCTGGATaGAGCTCTCTCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRVSPPG*SSLHST
Trigger: GGTGGAATGGAGAGAGCTCCATCCAGGGGGTGACAC...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCTGTGTGTCACCCCCTaGATGGAGCTCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVLCVTP*MELSPF
Trigger: GAATGGAGAGAGCTCCATCCAGGGGGTGACACACAG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPAPCTDPPVVCSQLGELSLSFP*ELSPAA
Trigger: AGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGA...GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLESLSFP*ELSPAA
Trigger: AGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGA...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGGGAAGGTCACCTGCTaGGAGCACCGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLGKVTC*EHRPGT
Trigger: TGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCACCTCATTTCCCTTTCTaGCCAGCATACCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPPHFPF*PAYQES
Trigger: ACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGG...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCAGGCTGGAGTGCAGTaGCTCACTGCAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGQAGVQ*LTASPT
Trigger: GGTGGGGCTTGCAGTGAGCCACTGCACTCCAGCCTG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp CACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCGTGGGGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: HLMKDFTDDQRFRIFRRGECGWK*RGASKT
Trigger: AGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTC...CCCACGCCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTTGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLCLCSQ*FTPITP
Trigger: TGGAGTGATTGGAGTGAATCATTGAGAGCACAAACA...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCGTGGGCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: HLMKDFTDDQRFRIFRRGQRTAF*ICCRHS
Trigger: GCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTG...CCCACGCCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp AACTGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCTCCACCACGTACTCCTaGACAGCAGAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: NWGHLMKDFTDDQRFRIFSTTYS*TAEGSF
Trigger: GAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGA...GAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGGAATTTCACAGAGCTaGGGCTGGGAGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACGISQS*GWELES
Trigger: GGACTCCAACTCCCAGCCTCAGCTCTGTGAAATTCC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGAAAGGGAGATGTGCTaGGGCTCCAGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVEREMC*GSSSSR
Trigger: TCTGGAAGAACTGGAGCCTCAGCACATCTCCCTTTC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGCCACCTGTGGGCTCTaGTGTGTCGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDATCGL*CVALSK
Trigger: CTTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGACCAACGAAGATCTCTaGTCCACATATTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWTNEDL*STYLNF
Trigger: GAAATTCAAATATGTGGAGCAGAGATCTTCGTTGGT...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATACCAACGAAGATCTCTaGTCCACATATTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: SWLACPLAAARPMVAPRDTNEDL*STYLNF
Trigger: GAAATTCAAATATGTGGAGCAGAGATCTTCGTTGGT...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCVLPSV*RINFEA
Trigger: AGCCTCAAAATTTATCCTGCATACAGAAGGGAGAAC...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTTCTTTCCTGGGAGGCTaGCAAGTCACCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGSFLGG*QVTRML
Trigger: CAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGA...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCGTGGGCTCAGTGGTGCTTTGTaGTTAGAGTTACCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HLMKDFTDDQRFRIFRRGLSGAL*LELPRM
Trigger: CATCCTGGGTAACTCTAAGCACAAAGCACCACTGAG...CCCACGCCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR GCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGTATGTCACTCGGGGCTaGAGGCTGTTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLEYVTRG*RLFIGC
Trigger: ACATCCAATAAACAGCCTGCAGCCCCGAGTGACATA...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTAGCGCAAGTGCTATTTaGTGGATCTGGAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLSASAI*WIWNFS
Trigger: AGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCGATCCACCAGTTGTCTaGTCTCAGCTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGADPPVV*SQLGEL
Trigger: GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATC...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTGCCTGTCCTCTAGCTaGAGCCAGACCGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALCLSSS*SQTDGG
Trigger: GCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTCCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSPPELA*LSSSCS
Trigger: GCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGG...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCCCCCCAGAGCTGGCTTaGCTGTCCTCTAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVPPELA*LSSSCS
Trigger: GCTGCAGCTAGAGGACAGGCAAGCCAGCTCTGGGGG...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCACTGCTGTGTAGCAGGTaGTTTAGAAATAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPLLCSR*FRNSHC
Trigger: GCAATGACTATTTCTAAAGCACCTGCTACACAGCAG...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCAGTGCAGTGGCTCACTaGAAGCCCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLSAVAH*KPHLPG
Trigger: ACCTGGGAGGTGGGGCTTGCAGTGAGCCACTGCACT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTATTTTGAGGCTGTTCTaGAGCAACACCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLILRLF*SNTNED
Trigger: ATCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAAT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGAGTTTGCAGAGACCTaGCGAGGAGCCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVEFAET*RGASNP
Trigger: AGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGTGATGGCATTAATGTaGGGGCCACTCAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVVMALM*GPLSGA
Trigger: AGCACCACTGAGTGGCCCCCACATTAATGCCATCAC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGAGCAATGCAAATGCTTaGTGCCACAAACGCCATCCA +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVSNANA*CHKRHP
Trigger: TGGATGGCGTTTGTGGCACCAAGCATTTGCATTGCT...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTGGGTTTTCGGGCTTTaGGTCGGAGCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALWVFGL*VGAPAL
Trigger: GAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCGGGAAGGTCACCTGCTaGGAGCACCGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCGKVTC*EHRPGT
Trigger: TGTCCCTGGACGGTGCTCCCAGCAGGTGACCTTCCC...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCAGTAGCCATCATGGGTaGGAAGGTCACCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACSSHHG*EGHLLG
Trigger: TCCCAGCAGGTGACCTTCCCACCCATGATGGCTACT...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGTTCCAGCGTTCATGTaGGAAGGGGTACGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARVPAFM*EGVRGG
Trigger: TCCACCCCGTACCCCTTCCCACATGAACGCTGGAAC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCAGGGAGTGGCCATGGTaGAAATTGATTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPAPCTDPPVVCSQLGELREWPW*KLILLS
Trigger: TGACAGAAGAATCAATTTTCACCATGGCCACTCCCT...GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp TCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCGAAATTGGATTCAGGTaGTTCAGGGGTGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SPAPCTDPPVVCSQLGELEIGFR*FRGEVD
Trigger: ATCAACCTCACCCCTGAATCACCTGAATCCAATTTC...GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCCTCACAGAAGCCTTTTaGAATTTGATTCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCLTEAF*NLILMS
Trigger: GGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAG...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp AACTGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGAGGTGTGTCCTGTaGTGTTCTGTGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: NWGHLMKDFTDDQRFRIFRRCVL*CSVSWL
Trigger: AAGCCATGACACAGAACATCACAGGACACACCTCCT...GAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCAGGAGGTGTGTCCTGTaGTGTTCTGTGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGARRCVL*CSVSWL
Trigger: AAGCCATGACACAGAACATCACAGGACACACCTCCT...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTCCACCACGTACTCCTaGACAGCAGAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACSTTYS*TAEGSF
Trigger: GAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGATCCTCCTTGATCCCCTaGGAGTGCATACACACGGAT +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRSSLIP*ECIHTD
Trigger: ATCCGTGTGTATGCACTCTCAGGGGATCAAGGAGGA...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGAGCTGCATCCTCCTTaGTCCCCTGAGAGTGCATAC +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVELHPP*SPESAY
Trigger: GTATGCACTCTCAGGGGATCAAGGAGGATGCAGCTC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGCTGGAAGTAATGCGTTaGGAAAATGCCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLELEVMR*ENAHHD
Trigger: ATCATGGTGGGCATTTTCTCAACGCATTACTTCCAG...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATCTCTGCTACACCACTaGGGTCTGAGGGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSSLLHH*GLRAAR
Trigger: CCTAGCAGCCCTCAGACCTCAGTGGTGTAGCAGAGA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTTCTCTGCTACACCACTaGGGTCTGAGGGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGSLLHH*GLRAAR
Trigger: CCTAGCAGCCCTCAGACCTCAGTGGTGTAGCAGAGA...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGAGAGGTGCCTCATGTaGGGGGAGGTCATCTATGTT +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACERCLM*GEVIYV
Trigger: AACATAGATGACCTCCCCTCACATGAGGCACCTCTC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGAGAAGGTGAGTGGGTaGAGAGAACTTGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVEKVSG*RELEGK
Trigger: TTTCCCCTCAAGTTCTCTTCACCCACTCACCTTCTC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTCACCACTCAGAGCATaGGGGAGTCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACSPLRA*GSHTSS
Trigger: AGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTAGGTTGTTCCGCTTCTaGGGAGGTGGCCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCRLFRF*GGGLVC
Trigger: ACAGACAAGGCCACCTCCTCAGAAGCGGAACAACCT...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGCCACCTGTGGGCTCTaGTGTGTCGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSATCGL*CVALSK
Trigger: CTTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp AGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTTCACATCGCCTCTCTTaGACGCATCTATTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SPCSPAPCTDPPVVCSQLSHRLS*THLFLL
Trigger: AAGCAAAAATAGATGCGTGCAAGAGAGGCGATGTGA...AAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLVLPSV*RINFEA
Trigger: AGCCTCAAAATTTATCCTGCATACAGAAGGGAGAAC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCCATATTCCAGAGCCTaGTGTTACTGGGCCGATATC +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAPYSRA*CYWADI
Trigger: GATATCGGCCCAGTAACAGCAGGCTCTGGAATATGG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCTCTTTCCTGGGAGGCTaGCAAGTCACCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGASFLGG*QVTRML
Trigger: CAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGA...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGCTCCTGGACTGGAATaGTGTTCCATGAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQLSALSLAPGLE*CSMKLK
Trigger: TTTTAATTTCATGGAACAGCATTCCAGTCCAGGAGC...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR GCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCAATTGGCTTTACCTTaGAGACAAAATTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLQLALP*RQNSLS
Trigger: TGAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGAAGGCAGGGCCTGCTaGAGCAAAAAGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACEGRAC*SKKERK
Trigger: TTTCCTCTCCTTTTTGCTGCAGCAGGCCCTGCCTTC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGGATTCTGCCACCTGTaGGCTCTGCTGTGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGGFCHL*ALLCRL
Trigger: AAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCAGGATCTTCAGGCGTaGGCCAGTCTATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGQDLQA*ASLSGA
Trigger: GGCTCCTGATAGACTGGCCCACGCCTGAAGATCCTG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCAGGATCTTCAGGCGTaGGCCAGTCTATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNQDLQA*ASLSGA
Trigger: GGCTCCTGATAGACTGGCCCACGCCTGAAGATCCTG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTGGGTTTTCGGGCTTTaGGTCGGAGCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVWVFGL*VGAPAL
Trigger: GAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTGGGTTTTCGGGCTTTaGGTCGGAGCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSWVFGL*VGAPAL
Trigger: GAGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAAGTAGCCATCATGGGTaGGAAGGTCACCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARSSHHG*EGHLLG
Trigger: TCCCAGCAGGTGACCTTCCCACCCATGATGGCTACT...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACAGCCAGACCGATGGTaGCACCCAGAGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSQPDRW*HPEMTA
Trigger: AGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACCTGCAGCCAGACCGATaGTGGCACCCAGAGATGACA +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDLQPDR*WHPEMT
Trigger: TGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAG...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTACCCGAGATTCAGAGTaGGAGGCTGGGTTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGTRDSE*EAGLPK
Trigger: CTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGT...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CAA 72 bp AAGATAATAGGTTGTTCCGCTTCTGAGGAGGTGGCCTaGTCTGTCATGGTTTGTGCCAGTCAAGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: KIIGCSASEEVA*SVMVCASQGHV
Trigger: GACATGCCCTTGACTGGCACAAACCATGACAGACAAGGCCACCTCCTCAGAAGCGGAACAACCTATTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGACGTGGCACTTTGTTaGCAGCCATCAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACDVALC*QPSGNF
Trigger: AAAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR TCA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTAGGGAGTGGCCATGGTaGAAATTGATTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGREWPW*KLILLS
Trigger: TGACAGAAGAATCAATTTTCACCATGGCCACTCCCT...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCACTCACAGAAGCCTTTTaGAATTTGATTCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPLTEAF*NLILMS
Trigger: GGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAG...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATCCACCACGTACTCCTaGACAGCAGAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVSTTYS*TAEGSF
Trigger: GAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGGAATTTCACAGAGCTaGGGCTGGGAGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTGISQS*GWELES
Trigger: GGACTCCAACTCCCAGCCTCAGCTCTGTGAAATTCC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGATACACCACTGAGGTCTaGGGGCTGCTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARYTTEV*GLLGEQ
Trigger: TTGTTCTCCTAGCAGCCCTCAGACCTCAGTGGTGTA...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGAGAGGTGCCTCATGTaGGGGGAGGTCATCTATGTT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARERCLM*GEVIYV
Trigger: AACATAGATGACCTCCCCTCACATGAGGCACCTCTC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGAAAGGGAGATGTGCTaGGGCTCCAGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKAREREMC*GSSSSR
Trigger: TCTGGAAGAACTGGAGCCTCAGCACATCTCCCTTTC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTCACCTCATCTTTAACTaGTCCAGAGTCAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSHLIFN*SRVSLS
Trigger: TGATAAGCTGACTCTGGATCAGTTAAAGATGAGGTG...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGCAGGCTGTGCTGGTTaGGGGCACACTGACTTTAAG +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNAGCAG*GHTDFK
Trigger: CTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTGGGGTCTTAGACCCTaGGACAGCCCTGGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVWGLRP*DSPGPE
Trigger: TTCAGGACCAGGGCTGTCTCAGGGTCTAAGACCCCA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGACTGCAGTATCATATaGGACTTTAAGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLDCSII*DFKGKK
Trigger: TTTCTTTCCCTTAAAGTCTCATATGATACTGCAGTC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAACTATGGACCAGGCATaGTGCTGGTGCTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTTMDQA*CWCWGN
Trigger: GTTTCCCCAGCACCAGCATCATGCCTGGTCCATAGT...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTACCAACGAAGATCTCTaGTCCACATATTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLTNEDL*STYLNF
Trigger: GAAATTCAAATATGTGGAGCAGAGATCTTCGTTGGT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCCATATTCCAGAGCCTaGTGTTACTGGGCCGATATC +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACPYSRA*CYWADI
Trigger: GATATCGGCCCAGTAACAGCAGGCTCTGGAATATGG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCTCAGTGGTGCTTTGTaGTTAGAGTTACCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVLSGAL*LELPRM
Trigger: CATCCTGGGTAACTCTAAGCACAAAGCACCACTGAG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAAGGAGGCAGCCCATTTaGTCCTGGACTGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTRRQPI*SWTGML
Trigger: CAGCATTCCAGTCCAGGAGCAAATGGGCTGCCTCCT...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCTATGTCACTCGGGGCTaGAGGCTGTTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVYVTRG*RLFIGC
Trigger: ACATCCAATAAACAGCCTGCAGCCCCGAGTGACATA...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTTGGGTCGGAGCCCCTaGTCTCCAGCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVLGRSP*SPAPCT
Trigger: TGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCTGCTGTGTACAGCCTaGTGTGTAGCAGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACLLCTA*CVAGAL
Trigger: TAAAGCACCTGCTACACAGCAGGCTGTACACAGCAG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCATCAACAATCAACTCTaGTATAGAACTCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCINNQL*YRTPYS
Trigger: AGAATACGGAGTTCTATACCAGAGTTGATTGTTGAT...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGTTAACTTGTTACGTCTaGAATAGTGAAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: APALQHLVQIHQLSALSLLTCYV*NSESSL
Trigger: AAGGCTGCTTTCACTATTCCAGACGTAACAAGTTAA...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGTACTCAGTGTATAAGTaGGTGTCTCGTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRYSVYK*VSRPLS
Trigger: GGAAAGAGGACGAGACACCCACTTATACACTGAGTA...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLQRDLS*EAAKSP
Trigger: TGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGQRDLS*EAAKSP
Trigger: TGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACTGTGTGTCACCCCCTaGATGGAGCTCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLCVTP*MELSPF
Trigger: GAATGGAGAGAGCTCCATCCAGGGGGTGACACACAG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCTGTGTGTCACCCCCTaGATGGAGCTCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGLCVTP*MELSPF
Trigger: GAATGGAGAGAGCTCCATCCAGGGGGTGACACACAG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACCTGTGTGTCACCCCCTaGATGGAGCTCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDLCVTP*MELSPF
Trigger: GAATGGAGAGAGCTCCATCCAGGGGGTGACACACAG...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCTGTGTGTCACCCCCTaGATGGAGCTCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLCVTP*MELSPF
Trigger: GAATGGAGAGAGCTCCATCCAGGGGGTGACACACAG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGCAAACGCCATCCAATTaGCTTTACCTTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLEQTPSN*LYLADK
Trigger: TTTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTG...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCAGCAATGCAAATGCTTaGTGCCACAAACGCCATCCA +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGASNANA*CHKRHP
Trigger: TGGATGGCGTTTGTGGCACCAAGCATTTGCATTGCT...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCAGTAGCCATCATGGGTaGGAAGGTCACCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLSSHHG*EGHLLG
Trigger: TCCCAGCAGGTGACCTTCCCACCCATGATGGCTACT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGGGTCAGGGAGCCTTTaGTCCAGCCCTTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTGSGSL*SSPLQD
Trigger: GTCTTGTAAAGGGCTGGACCAAAGGCTCCCTGACCC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTGGCCATGGTGAAAATTaGTTCTTCTGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSGHGEN*FFCQTC
Trigger: ACAAGTTTGACAGAAGAATCAATTTTCACCATGGCC...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR TCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGGAAGACCTGTGACTTaGGAATTGAGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTGRPVT*ELREWP
Trigger: TGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGGAAGACCTGTGACTTaGGAATTGAGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGGRPVT*ELREWP
Trigger: TGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCGTGGGGAATTTCATCACTATTaGTACAGGCCAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: HLMKDFTDDQRFRIFRRGEFHHY*YRPVCR
Trigger: TCTGCAAACTGGCCTGTATCAATAGTGATGAAATTC...CCCACGCCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGAAATTGGATTCAGGTaGTTCAGGGGTGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVEIGFR*FRGEVD
Trigger: ATCAACCTCACCCCTGAATCACCTGAATCCAATTTC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACQRTAF*ICCRHS
Trigger: GCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATCCACCACGTACTCCTaGACAGCAGAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTSTTYS*TAEGSF
Trigger: GAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATCCTCCTTGATCCCCTaGGAGTGCATACACACGGAT +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSSSLIP*ECIHTD
Trigger: ATCCGTGTGTATGCACTCTCAGGGGATCAAGGAGGA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGGAATTTCACAGAGCTaGGGCTGGGAGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSGISQS*GWELES
Trigger: GGACTCCAACTCCCAGCCTCAGCTCTGTGAAATTCC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCGTGGGGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: HLMKDFTDDQRFRIFRRGAVYWM*ILGDSV
Trigger: TACAGAGTCTCCCAAAATTCACATCCAATAAACAGC...CCCACGCCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR TCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACTACACCACTGAGGTCTaGGGGCTGCTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDYTTEV*GLLGEQ
Trigger: TTGTTCTCCTAGCAGCCCTCAGACCTCAGTGGTGTA...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTACACCACTGAGGTCTaGGGGCTGCTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALYTTEV*GLLGEQ
Trigger: TTGTTCTCCTAGCAGCCCTCAGACCTCAGTGGTGTA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGAGAGGTGCCTCATGTaGGGGGAGGTCATCTATGTT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGERCLM*GEVIYV
Trigger: AACATAGATGACCTCCCCTCACATGAGGCACCTCTC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATCACCACTCAGAGCATaGGGGAGTCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTSPLRA*GSHTSS
Trigger: AGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGATGAGGCATCTGAGTaGAGACCAACTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLDEASE*RPTPSS
Trigger: GGAACTGGGAGTTGGTCTTCACTCAGATGCCTCATC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGATGAGGCATCTGAGTaGAGACCAACTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNDEASE*RPTPSS
Trigger: GGAACTGGGAGTTGGTCTTCACTCAGATGCCTCATC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGATGAGGCATCTGAGTaGAGACCAACTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGDEASE*RPTPSS
Trigger: GGAACTGGGAGTTGGTCTTCACTCAGATGCCTCATC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCTCAGGAAGTTCTGTTaGACAGTACTGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVLRKFC*TVLICC
Trigger: ACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGTCACATCGCCTCTCTTaGACGCATCTATTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRSHRLS*THLFLL
Trigger: AAGCAAAAATAGATGCGTGCAAGAGAGGCGATGTGA...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR GCA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAATAAAGGGTACATCTaGTCACAGAAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PALQHLVQIHQLSALSLENKGYI*SQKPFE
Trigger: TTCAAAAGGCTTCTGTGAGCAGATGTACCCTTTATT...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTCCATATTCCAGAGCCTaGTGTTACTGGGCCGATATC +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCPYSRA*CYWADI
Trigger: GATATCGGCCCAGTAACAGCAGGCTCTGGAATATGG...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTAATGCAAATGCTTGGTaGCACAAACGCCATCCAATT +
Preference number: 4 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGNANAW*HKRHPI
Trigger: AATTGGATGGCGTTTGTGGCACCAAGCATTTGCATT...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGATCCACCAGTTGTCTaGTCTCAGCTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALDPPVV*SQLGEL
Trigger: GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTTATCTTCCAGGCTCAACTTGAGCTGGCAGAGGACCAGCTCAATATCTTCTCCAGGAACCATTGGGGGTaGCGCACAATAATAGCTAAA +
Preference number: 4 (lower is better)
Translates to: VIFQAQLELAEDQLNIFSRNHWG*RTIIAK
Trigger: TTTAGCTATTATTGTGCGGCACCCCCAATGGTTCCT...GGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTATCAACAATCAACTCTaGTATAGAACTCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLINNQL*YRTPYS
Trigger: AGAATACGGAGTTCTATACCAGAGTTGATTGTTGAT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR CCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGCCAAGTAAAATTACATaGGAAGGCTTCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLEPSKIT*EGFTVT
Trigger: TGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGG...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTCCAAGTAAAATTACATaGGAAGGCTTCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSPSKIT*EGFTVT
Trigger: TGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGG...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGATTTTGAGGCTGTTCTaGAGCAACACCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRILRLF*SNTNED
Trigger: ATCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAAT...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CCA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACATTTTGAGGCTGTTCTaGAGCAACACCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNILRLF*SNTNED
Trigger: ATCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAAT...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSQRDLS*EAAKSP
Trigger: TGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTG...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGTGGGGGCCACTCAGTaGTGCTTTGTGCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSVGATQ*CFVLRV
Trigger: AACTCTAAGCACAAAGCACCACTGAGTGGCCCCCAC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGTGATGGCATTAATGTaGGGGCCACTCAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGVMALM*GPLSGA
Trigger: AGCACCACTGAGTGGCCCCCACATTAATGCCATCAC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGTGATGGCATTAATGTaGGGGCCACTCAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTVMALM*GPLSGA
Trigger: AGCACCACTGAGTGGCCCCCACATTAATGCCATCAC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLCLLSA*RALGGG
Trigger: ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACA...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTAGTAGCCATCATGGGTaGGAAGGTCACCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSSSHHG*EGHLLG
Trigger: TCCCAGCAGGTGACCTTCCCACCCATGATGGCTACT...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCCTCATTTCCCTTTCTaGCCAGCATACCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVPHFPF*PAYQES
Trigger: ACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGACGTGGCACTTTGTTaGCAGCCATCAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLDVALC*QPSGNF
Trigger: AAAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR TCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCECGWK*RGASKT
Trigger: AGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAAGGAGGTGTGTCCTGTaGTGTTCTGTGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTRRCVL*CSVSWL
Trigger: AAGCCATGACACAGAACATCACAGGACACACCTCCT...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGAGGAGGTGTGTCCTGTaGTGTTCTGTGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALRRCVL*CSVSWL
Trigger: AAGCCATGACACAGAACATCACAGGACACACCTCCT...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACAGGAGGTGTGTCCTGTaGTGTTCTGTGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNRRCVL*CSVSWL
Trigger: AAGCCATGACACAGAACATCACAGGACACACCTCCT...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARQRTAF*ICCRHS
Trigger: GCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCTGGAAGTAATGCGTTaGGAAAATGCCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACLEVMR*ENAHHD
Trigger: ATCATGGTGGGCATTTTCTCAACGCATTACTTCCAG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCTACACCACTGAGGTCTaGGGGCTGCTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCYTTEV*GLLGEQ
Trigger: TTGTTCTCCTAGCAGCCCTCAGACCTCAGTGGTGTA...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTCACCACTCAGAGCATaGGGGAGTCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSSPLRA*GSHTSS
Trigger: AGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACTCAGGAAGTTCTGTTaGACAGTACTGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRLRKFC*TVLICC
Trigger: ACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAG...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTTCAAGAGTTCCAACCTaGAGAAGCAGAGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCSRVPT*RSRATV
Trigger: GACAGTTGCTCTGCTTCTTCAGGTTGGAACTCTTGA...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACGCGATAAAATCGTGTaGTCAGCGTTCACAGCCATA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARRDKIV*SAFTAI
Trigger: TATGGCTGTGAACGCTGAGCACACGATTTTATCGCG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGTCCTCTAAAAGTATGTaGCATCAACAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: APCTDPPVVCSQLGELLESSKSM*HQQSTL
Trigger: CAGAGTTGATTGTTGATGGCACATACTTTTAGAGGA...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGACCAACGAAGATCTCTaGTCCACATATTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVTNEDL*STYLNF
Trigger: GAAATTCAAATATGTGGAGCAGAGATCTTCGTTGGT...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTAATAAAGGGTACATCTaGTCACAGAAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSNKGYI*SQKPFE
Trigger: TTCAAAAGGCTTCTGTGAGCAGATGTACCCTTTATT...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR GCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACCATATTCCAGAGCCTaGTGTTACTGGGCCGATATC +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSPYSRA*CYWADI
Trigger: GATATCGGCCCAGTAACAGCAGGCTCTGGAATATGG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTTCTTTCCTGGGAGGCTaGCAAGTCACCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGSFLGG*QVTRML
Trigger: CAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGA...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATATGTCACTCGGGGCTaGAGGCTGTTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVYVTRG*RLFIGC
Trigger: ACATCCAATAAACAGCCTGCAGCCCCGAGTGACATA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGCAATTGGCTTTACCTTaGAGACAAAATTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRQLALP*RQNSLS
Trigger: TGAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTG...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR GCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCAATGCAAATGCTTGGTaGCACAAACGCCATCCAATT +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGANANAW*HKRHPI
Trigger: AATTGGATGGCGTTTGTGGCACCAAGCATTTGCATT...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCAGCGCAAGTGCTATTTaGTGGATCTGGAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGASASAI*WIWNFS
Trigger: AGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCT...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGGGCTTGAGGCACTGTaGATCATGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSGLEAL*IMSFSE
Trigger: CTCTGAGAAAGACATGATGCACAGTGCCTCAAGCCC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGCTGCTGTGTACAGCCTaGTGTGTAGCAGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALLLCTA*CVAGAL
Trigger: TAAAGCACCTGCTACACAGCAGGCTGTACACAGCAG...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACTGCTGTGTACAGCCTaGTGTGTAGCAGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLLCTA*CVAGAL
Trigger: TAAAGCACCTGCTACACAGCAGGCTGTACACAGCAG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTTAACTTGTTACGTCTaGAATAGTGAAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LQHLVQIHQLSALSLESSLTCYV*NSESSL
Trigger: AAGGCTGCTTTCACTATTCCAGACGTAACAAGTTAA...AGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCGTGGGGGCCACTCAGTaGTGCTTTGTGCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVVGATQ*CFVLRV
Trigger: AACTCTAAGCACAAAGCACCACTGAGTGGCCCCCAC...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNSLSFP*ELSPAA
Trigger: AGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGSLSFP*ELSPAA
Trigger: AGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGA...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTTATCTTCCAGGCTCAACTTGAGCTGGCAGAGGACCAGCTCAATATCTTCTCCGCAAGTGCTATTTGCTaGATCTGGAATTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VIFQAQLELAEDQLNIFSASAIC*IWNFSA
Trigger: AGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGC...GGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTGTCTGCTCTCAGCTTaGAGAGCTCTTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVCLLSA*RALGGG
Trigger: ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGGAGGTCATCTATGTTaGAGGGTAAGTAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACGGHLC*RVSSHH
Trigger: ATGATGGCTACTTACCCTCCAACATAGATGACCTCC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGAGGCTCAACTTGAGCTaGCAGAGGACCAGCTCAATA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALRLNLS*QRTSSI
Trigger: TATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCT...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACTTATTTCTACAGGACTaGGGTATGCATGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNLFLQD*GMHGQV
Trigger: AACTTGTCCATGCATACCCCAGTCCTGTAGAAATAA...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CAA 72 bp ATGTTGTGGAAAAGAGAGTTATCTTCCAGGCTCAACTaGAGCTGGCAGAGGACCAGCTCAATATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: MLWKRELSSRLN*SWQRTSSISSP
Trigger: CGGAGAAGATATTGAGCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGATAACTCTCTTTTCCACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGGCCATGGTGAAAATTaGTTCTTCTGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVGHGEN*FFCQTC
Trigger: ACAAGTTTGACAGAAGAATCAATTTTCACCATGGCC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAAGGGAGTGGCCATGGTaGAAATTGATTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVREWPW*KLILLS
Trigger: TGACAGAAGAATCAATTTTCACCATGGCCACTCCCT...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDECGWK*RGASKT
Trigger: AGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACCLCSQ*FTPITP
Trigger: TGGAGTGATTGGAGTGAATCATTGAGAGCACAAACA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGQRTAF*ICCRHS
Trigger: GCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDQRTAF*ICCRHS
Trigger: GCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTG...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVAVYWM*ILGDSV
Trigger: TACAGAGTCTCCCAAAATTCACATCCAATAAACAGC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTACTGGAAGTAATGCGTTaGGAAAATGCCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVLEVMR*ENAHHD
Trigger: ATCATGGTGGGCATTTTCTCAACGCATTACTTCCAG...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCGAGAAGGTGAGTGGGTaGAGAGAACTTGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVEKVSG*RELEGK
Trigger: TTTCCCCTCAAGTTCTCTTCACCCACTCACCTTCTC...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTACTCAGGAAGTTCTGTTaGACAGTACTGATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVLRKFC*TVLICC
Trigger: ACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAG...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCAAGCTACAGCGATGCTaGGAGGAAAGGAACCATTGG +
Preference number: 4 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCKLQRC*EERNHW
Trigger: CCAATGGTTCCTTTCCTCTCAGCATCGCTGTAGCTT...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGCGCGATAAAATCGTGTaGTCAGCGTTCACAGCCATA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALRDKIV*SAFTAI
Trigger: TATGGCTGTGAACGCTGAGCACACGATTTTATCGCG...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR GCA 90 bp AACTGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCGCACGCATCTATTTTTaGTTTAATCAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: NWGHLMKDFTDDQRFRIFARIYF*FNQQPR
Trigger: ACGTGGCTGTTGATTAAAGCAAAAATAGATGCGTGC...GAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR GCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGATCACATCGCCTCTCTTaGACGCATCTATTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRSHRLS*THLFLL
Trigger: AAGCAAAAATAGATGCGTGCAAGAGAGGCGATGTGA...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCTCAGTGGTGCTTTGTaGTTAGAGTTACCCAGGATG +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLSGAL*LELPRM
Trigger: CATCCTGGGTAACTCTAAGCACAAAGCACCACTGAG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTTATGTCACTCGGGGCTaGAGGCTGTTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGYVTRG*RLFIGC
Trigger: ACATCCAATAAACAGCCTGCAGCCCCGAGTGACATA...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTATGTCACTCGGGGCTaGAGGCTGTTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALYVTRG*RLFIGC
Trigger: ACATCCAATAAACAGCCTGCAGCCCCGAGTGACATA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCAATTGGCTTTACCTTaGAGACAAAATTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVQLALP*RQNSLS
Trigger: TGAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACACTGCCAAAGTTCCTaGTTTCAAGTTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARHCQSS*FQVVCS
Trigger: ACTGCAGACAACTTGAAAGCAGGAACTTTGGCAGTG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCCAAGTAAAATTACATaGGAAGGCTTCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAPSKIT*EGFTVT
Trigger: TGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATACTCAGTGTATAAGTaGGTGTCTCGTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVYSVYK*VSRPLS
Trigger: GGAAAGAGGACGAGACACCCACTTATACACTGAGTA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSSLSFP*ELSPAA
Trigger: AGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACAAACGCCATCCAATTaGCTTTACCTTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRQTPSN*LYLADK
Trigger: TTTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTG...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGCAATGCAAATGCTTaGTGCCACAAACGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSSNANA*CHKRHP
Trigger: TGGATGGCGTTTGTGGCACCAAGCATTTGCATTGCT...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGCAAGTGCTATTTGCTaGATCTGGAATTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACASAIC*IWNFSA
Trigger: AGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCCAGGATCTTCAGGCGTaGGCCAGTCTATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFQDLQA*ASLSGA
Trigger: GGCTCCTGATAGACTGGCCCACGCCTGAAGATCCTG...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGGGATGTCTGAAAACTaGGGTCACTTGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLGMSEN*GHLMKD
Trigger: GTCCTTCATCAAGTGACCCCAGTTTTCAGACATCCC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAACGTCCAGGGACAGGCTaGGTTTTCGGGCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQRPGTG*VFGLWV
Trigger: GACCCAAAGCCCGAAAACCCAGCCTGTCCCTGGACG...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCAGACTCCCCCAGAGCTaGCTTGCCTGTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFRLPQS*LACPLA
Trigger: AGCTAGAGGACAGGCAAGCCAGCTCTGGGGGAGTCT...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACCTCATTTCCCTTTCTaGCCAGCATACCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARPHFPF*PAYQES
Trigger: ACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGAGGAAAGGAACCATTaGGGGTGCCGCACAATAATA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNEERNH*GCRTII
Trigger: TATTATTGTGCGGCACCCCCAATGGTTCCTTTCCTC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACAGGGAGTGGCCATGGTaGAAATTGATTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNREWPW*KLILLS
Trigger: TGACAGAAGAATCAATTTTCACCATGGCCACTCCCT...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGAGGGAGTGGCCATGGTaGAAATTGATTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALREWPW*KLILLS
Trigger: TGACAGAAGAATCAATTTTCACCATGGCCACTCCCT...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGAAATTGGATTCAGGTaGTTCAGGGGTGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSEIGFR*FRGEVD
Trigger: ATCAACCTCACCCCTGAATCACCTGAATCCAATTTC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGAAATTGGATTCAGGTaGTTCAGGGGTGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALEIGFR*FRGEVD
Trigger: ATCAACCTCACCCCTGAATCACCTGAATCCAATTTC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSECGWK*RGASKT
Trigger: AGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCECGWK*RGASKT
Trigger: AGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTC...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCCTCACAGAAGCCTTTTaGAATTTGATTCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVLTEAF*NLILMS
Trigger: GGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAG...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCTCACAGAAGCCTTTTaGAATTTGATTCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: RYILRLLQMRPVMTTLGALTEAF*NLILMS
Trigger: GGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVCLCSQ*FTPITP
Trigger: TGGAGTGATTGGAGTGAATCATTGAGAGCACAAACA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVQRTAF*ICCRHS
Trigger: GCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTG...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCGAGCTGCATCCTCCTTaGTCCCCTGAGAGTGCATAC +
Preference number: 4 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFELHPP*SPESAY
Trigger: GTATGCACTCTCAGGGGATCAAGGAGGATGCAGCTC...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGCTGGAAGTAATGCGTTaGGAAAATGCCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALLEVMR*ENAHHD
Trigger: ATCATGGTGGGCATTTTCTCAACGCATTACTTCCAG...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTCACCTCATCTTTAACTaGTCCAGAGTCAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCHLIFN*SRVSLS
Trigger: TGATAAGCTGACTCTGGATCAGTTAAAGATGAGGTG...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCTCCTCTAAAAGTATGTaGCATCAACAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVSSKSM*HQQSTL
Trigger: CAGAGTTGATTGTTGATGGCACATACTTTTAGAGGA...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCACCAACGAAGATCTCTaGTCCACATATTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: PRPARKRYILRLLQMRPVTNEDL*STYLNF
Trigger: GAAATTCAAATATGTGGAGCAGAGATCTTCGTTGGT...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCCTCAGTGGTGCTTTGTaGTTAGAGTTACCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCLSGAL*LELPRM
Trigger: CATCCTGGGTAACTCTAAGCACAAAGCACCACTGAG...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGCTCCTGGACTGGAATaGTGTTCCATGAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACAPGLE*CSMKLK
Trigger: TTTTAATTTCATGGAACAGCATTCCAGTCCAGGAGC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAAATGCAAATGCTTGGTaGCACAAACGCCATCCAATT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARNANAW*HKRHPI
Trigger: AATTGGATGGCGTTTGTGGCACCAAGCATTTGCATT...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTACTGCTGTGTAGCAGGTaGTTTAGAAATAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVLLCSR*FRNSHC
Trigger: GCAATGACTATTTCTAAAGCACCTGCTACACAGCAG...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGTACTGGACAGTGAGTaGAGAGGTAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNVLDSE*RGRTFP
Trigger: TGGAAATGTTCTACCTCTGCACTCACTGTCCAGTAC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGATGCTTTCAAGTTGTCTaGAGTCCAACAGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: ELPRPARKRYILRLLQMRCFQVV*SPTEKV
Trigger: TACTTTCTCTGTTGGACTGCAGACAACTTGAAAGCA...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCACAGCCATAGAGACGTaGCACTTTGTTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVTAIET*HFVDSH
Trigger: ATGGCTGTCAACAAAGTGCCACGTCTCTATGGCTGT...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CCA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCCAAGTAAAATTACATaGGAAGGCTTCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACPSKIT*EGFTVT
Trigger: TGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATACTCAGTGTATAAGTaGGTGTCTCGTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTYSVYK*VSRPLS
Trigger: GGAAAGAGGACGAGACACCCACTTATACACTGAGTA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTACTCAGTGTATAAGTaGGTGTCTCGTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALYSVYK*VSRPLS
Trigger: GGAAAGAGGACGAGACACCCACTTATACACTGAGTA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACTACTCAGTGTATAAGTaGGTGTCTCGTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDYSVYK*VSRPLS
Trigger: GGAAAGAGGACGAGACACCCACTTATACACTGAGTA...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGCTATTTGCTGGATCTaGAATTTCTCTGCTACACCA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARAICWI*NFSATP
Trigger: TGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGGAGGTCATCTATGTTaGAGGGTAAGTAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLGGHLC*RVSSHH
Trigger: ATGATGGCTACTTACCCTCCAACATAGATGACCTCC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGGAGGTCATCTATGTTaGAGGGTAAGTAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNGGHLC*RVSSHH
Trigger: ATGATGGCTACTTACCCTCCAACATAGATGACCTCC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGTAATTTTAAGGCCCTaGGAAAGGCAAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTVILRP*ERQDEA
Trigger: TGCCTCATCTTGCCTTTCCCAGGGCCTTAAAATTAC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGTAATTTTAAGGCCCTaGGAAAGGCAAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSVILRP*ERQDEA
Trigger: TGCCTCATCTTGCCTTTCCCAGGGCCTTAAAATTAC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGTAATTTTAAGGCCCTaGGAAAGGCAAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNVILRP*ERQDEA
Trigger: TGCCTCATCTTGCCTTTCCCAGGGCCTTAAAATTAC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGGAGACTTGGTAAAATaGGGTGTTGTAGACACAAGG +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTGDLVK*GVVDTR
Trigger: CCTTGTGTCTACAACACCCCATTTTACCAAGTCTCC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
3UTR CAA 72 bp ATTATTAGCAGTTTAGACCAAGACTTCTCCACTAGTTaGGCAGAAGTGCCTATGGTGAAGAGACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IISSLDQDFSTS*AEVPMVKRQRQ
Trigger: CTGCCTCTGTCTCTTCACCATAGGCACTTCTGCCAAACTAGTGGAGAAGTCTTGGTCTAAACTGCTAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGAATTTCATCACTATTaGTACAGGCCAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKAREFHHY*YRPVCR
Trigger: TCTGCAAACTGGCCTGTATCAATAGTGATGAAATTC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNCLCSQ*FTPITP
Trigger: TGGAGTGATTGGAGTGAATCATTGAGAGCACAAACA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLCLCSQ*FTPITP
Trigger: TGGAGTGATTGGAGTGAATCATTGAGAGCACAAACA...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCACCTCATCTTTAACTaGTCCAGAGTCAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNHLIFN*SRVSLS
Trigger: TGATAAGCTGACTCTGGATCAGTTAAAGATGAGGTG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCACCTCATCTTTAACTaGTCCAGAGTCAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLHLIFN*SRVSLS
Trigger: TGATAAGCTGACTCTGGATCAGTTAAAGATGAGGTG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGCACGCATCTATTTTTaGTTTAATCAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARARIYF*FNQQPR
Trigger: ACGTGGCTGTTGATTAAAGCAAAAATAGATGCGTGC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATCACATCGCCTCTCTTaGACGCATCTATTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTSHRLS*THLFLL
Trigger: AAGCAAAAATAGATGCGTGCAAGAGAGGCGATGTGA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLGPHSEGCNFKALGKARVLPSV*RINFEA
Trigger: AGCCTCAAAATTTATCCTGCATACAGAAGGGAGAAC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGCTCCTGGACTGGAATaGTGTTCCATGAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVAPGLE*CSMKLK
Trigger: TTTTAATTTCATGGAACAGCATTCCAGTCCAGGAGC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACAATGCAAATGCTTGGTaGCACAAACGCCATCCAATT +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNNANAW*HKRHPI
Trigger: AATTGGATGGCGTTTGTGGCACCAAGCATTTGCATT...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACAATGCAAATGCTTGGTaGCACAAACGCCATCCAATT +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDNANAW*HKRHPI
Trigger: AATTGGATGGCGTTTGTGGCACCAAGCATTTGCATT...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCAGCGCAAGTGCTATTTaGTGGATCTGGAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLSASAI*WIWNFS
Trigger: AGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACTGTGTCTTCTCCTCTaGAATGGGATATTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLCLLL*NGIFLS
Trigger: GCTAAGAAATATCCCATTGCAGAGGAGAAGACACAG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCTGTGTCTTCTCCTCTaGAATGGGATATTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLCLLL*NGIFLS
Trigger: GCTAAGAAATATCCCATTGCAGAGGAGAAGACACAG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACACTGTGTCTTCTCCTCTaGAATGGGATATTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTLCLLL*NGIFLS
Trigger: GCTAAGAAATATCCCATTGCAGAGGAGAAGACACAG...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGCTGCTGTGTAGCAGGTaGTTTAGAAATAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALLLCSR*FRNSHC
Trigger: GCAATGACTATTTCTAAAGCACCTGCTACACAGCAG...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATACAGGACTGGGGTATaGATGGACAAGTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVYRTGV*MDKFLV
Trigger: AACTAAAAACTTGTCCATGCATACCCCAGTCCTGTA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTACCAAGTAAAATTACATaGGAAGGCTTCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVPSKIT*EGFTVT
Trigger: TGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGG...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAATTTTGAGGCTGTTCTaGAGCAACACCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSILRLF*SNTNED
Trigger: ATCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAAT...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTACTCAGTGTATAAGTaGGTGTCTCGTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSYSVYK*VSRPLS
Trigger: GGAAAGAGGACGAGACACCCACTTATACACTGAGTA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACACAAACGCCATCCAATTaGCTTTACCTTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTQTPSN*LYLADK
Trigger: TTTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTG...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGCTATTTGCTGGATCTaGAATTTCTCTGCTACACCA +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDAICWI*NFSATP
Trigger: TGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGCAAGTGCTATTTGCTaGATCTGGAATTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGASAIC*IWNFSA
Trigger: AGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGGAGGTCATCTATGTTaGAGGGTAAGTAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSGGHLC*RVSSHH
Trigger: ATGATGGCTACTTACCCTCCAACATAGATGACCTCC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCGGAGGTCATCTATGTTaGAGGGTAAGTAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVGGHLC*RVSSHH
Trigger: ATGATGGCTACTTACCCTCCAACATAGATGACCTCC...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGAATTTCATCACTATTaGTACAGGCCAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALEFHHY*YRPVCR
Trigger: TCTGCAAACTGGCCTGTATCAATAGTGATGAAATTC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGAATTTCATCACTATTaGTACAGGCCAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNEFHHY*YRPVCR
Trigger: TCTGCAAACTGGCCTGTATCAATAGTGATGAAATTC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGAATTTCATCACTATTaGTACAGGCCAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDEFHHY*YRPVCR
Trigger: TCTGCAAACTGGCCTGTATCAATAGTGATGAAATTC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSAVYWM*ILGDSV
Trigger: TACAGAGTCTCCCAAAATTCACATCCAATAAACAGC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALAVYWM*ILGDSV
Trigger: TACAGAGTCTCCCAAAATTCACATCCAATAAACAGC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCGAGAAGGTGAGTGGGTaGAGAGAACTTGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFEKVSG*RELEGK
Trigger: TTTCCCCTCAAGTTCTCTTCACCCACTCACCTTCTC...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTCACCTCATCTTTAACTaGTCCAGAGTCAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSHLIFN*SRVSLS
Trigger: TGATAAGCTGACTCTGGATCAGTTAAAGATGAGGTG...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAATCACCACTCAGAGCATaGGGGAGTCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQSPLRA*GSHTSS
Trigger: AGATGAGGTGTGACTCCCTCATGCTCTGAGTGGTGA...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGCACGCATCTATTTTTaGTTTAATCAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALARIYF*FNQQPR
Trigger: ACGTGGCTGTTGATTAAAGCAAAAATAGATGCGTGC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGCACGCATCTATTTTTaGTTTAATCAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGARIYF*FNQQPR
Trigger: ACGTGGCTGTTGATTAAAGCAAAAATAGATGCGTGC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCACATCGCCTCTCTTaGACGCATCTATTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVSHRLS*THLFLL
Trigger: AAGCAAAAATAGATGCGTGCAAGAGAGGCGATGTGA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTACCAACGAAGATCTCTaGTCCACATATTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCTNEDL*STYLNF
Trigger: GAAATTCAAATATGTGGAGCAGAGATCTTCGTTGGT...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGVLPSV*RINFEA
Trigger: AGCCTCAAAATTTATCCTGCATACAGAAGGGAGAAC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGCTCCTGGACTGGAATaGTGTTCCATGAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLAPGLE*CSMKLK
Trigger: TTTTAATTTCATGGAACAGCATTCCAGTCCAGGAGC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCAATTGGCTTTACCTTaGAGACAAAATTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLQLALP*RQNSLS
Trigger: TGAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCAATTGGCTTTACCTTaGAGACAAAATTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGQLALP*RQNSLS
Trigger: TGAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTAGCGCAAGTGCTATTTaGTGGATCTGGAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSSASAI*WIWNFS
Trigger: AGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCT...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTCTGTGTCTTCTCCTCTaGAATGGGATATTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSLCLLL*NGIFLS
Trigger: GCTAAGAAATATCCCATTGCAGAGGAGAAGACACAG...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACACCAAGTAAAATTACATaGGAAGGCTTCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTPSKIT*EGFTVT
Trigger: TGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGG...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTATTTTGAGGCTGTTCTaGAGCAACACCAACGAAGAT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSILRLF*SNTNED
Trigger: ATCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAAT...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCCAAACGCCATCCAATTaGCTTTACCTTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCQTPSN*LYLADK
Trigger: TTTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTG...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCGCAAGTGCTATTTGCTaGATCTGGAATTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVASAIC*IWNFSA
Trigger: AGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGC...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCTCACAGAAGCCTTTTaGAATTTGATTCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGLTEAF*NLILMS
Trigger: GGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAAGGAGGTGTGTCCTGTaGTGTTCTGTGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQRRCVL*CSVSWL
Trigger: AAGCCATGACACAGAACATCACAGGACACACCTCCT...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSAVYWM*ILGDSV
Trigger: TACAGAGTCTCCCAAAATTCACATCCAATAAACAGC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTCCTCTAAAAGTATGTaGCATCAACAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNSSKSM*HQQSTL
Trigger: CAGAGTTGATTGTTGATGGCACATACTTTTAGAGGA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTCCTCTAAAAGTATGTaGCATCAACAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALSSKSM*HQQSTL
Trigger: CAGAGTTGATTGTTGATGGCACATACTTTTAGAGGA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSVLPSV*RINFEA
Trigger: AGCCTCAAAATTTATCCTGCATACAGAAGGGAGAAC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAATAAAGGGTACATCTaGTCACAGAAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSNKGYI*SQKPFE
Trigger: TTCAAAAGGCTTCTGTGAGCAGATGTACCCTTTATT...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCGTGCTGGGGAAACACTaGCAAAGTTCCTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFVLGKH*QSSCFQ
Trigger: TTGAAAGCAGGAACTTTGGCAGTGTTTCCCCAGCAC...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTATCAACAATCAACTCTaGTATAGAACTCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCINNQL*YRTPYS
Trigger: AGAATACGGAGTTCTATACCAGAGTTGATTGTTGAT...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR CCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATTAACTTGTTACGTCTaGAATAGTGAAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLTCYV*NSESSL
Trigger: AAGGCTGCTTTCACTATTCCAGACGTAACAAGTTAA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTTAACTTGTTACGTCTaGAATAGTGAAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLTCYV*NSESSL
Trigger: AAGGCTGCTTTCACTATTCCAGACGTAACAAGTTAA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTCCAAGTCCATGTTGTaGAAAAGAGAGTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSSKSML*KRELSS
Trigger: GGAAGATAACTCTCTTTTCCACAACATGGACTTGGA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR TCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTCTCACAGAAGCCTTTTaGAATTTGATTCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSLTEAF*NLILMS
Trigger: GGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAG...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCTCTAAAAGTATGTaGCATCAACAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVSSKSM*HQQSTL
Trigger: CAGAGTTGATTGTTGATGGCACATACTTTTAGAGGA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR GCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGAAGTTAGCTCCCATTaGCAAAAGATAATAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSEVSSH*QKIIGC
Trigger: ACAACCTATTATCTTTTGGCAATGGGAGCTAACTTC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CCA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACATCAACAATCAACTCTaGTATAGAACTCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNINNQL*YRTPYS
Trigger: AGAATACGGAGTTCTATACCAGAGTTGATTGTTGAT...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR CCA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGATCAACAATCAACTCTaGTATAGAACTCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: FKLESLGPHSEGCNFKALINNQL*YRTPYS
Trigger: AGAATACGGAGTTCTATACCAGAGTTGATTGTTGAT...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS-3UTR CCA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTTAACTTGTTACGTCTaGAATAGTGAAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSLTCYV*NSESSL
Trigger: AAGGCTGCTTTCACTATTCCAGACGTAACAAGTTAA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CCA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATTAAAGAGCAAAACATaGATCATGTTCCAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTLKSKT*IMFQVH
Trigger: ATGGACTTGGAACATGATCCATGTTTTGCTCTTTAA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTTTAGAAATAGTCATTaGATGAATGGTCCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVFRNSH*MNGPLD
Trigger: GTCTAGAGGACCATTCATGCAATGACTATTTCTAAA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR TCA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCTTTTGGGAAGACAAATaGGGACTGCAGTATCATATG +
Preference number: 4 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFFWEDK*GLQYHM
Trigger: CATATGATACTGCAGTCCTCATTTGTCTTCCCAAAA...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR GCA 90 bp TTGGATCTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGCACGCATCTATTTTTaGTTTAATCAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: LDLLSCSLGKSIISSLDQARIYF*FNQQPR
Trigger: ACGTGGCTGTTGATTAAAGCAAAAATAGATGCGTGC...TTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAGATCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS CCA 90 bp GTGTCGCCTGCCAGCGGGCGCGGTCCCGGGCCTGCGGGGACCGGGTaGCCCCGGTGCTCTGGGCCGCACGTGTCGCGCTCTCCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: VSPASGRGPGPAGTG*PRCSGPHVSRSPRS
Trigger: AGAGCGCGGAGAGCGCGACACGTGCGGCCCAGAGCACCGGGGCCACCCGGTCCCCGCAGGCCCGGGACCGCGCCCGCTGGCAGGCGACAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000674203.2
CDS CCA 90 bp GGCGGTGGCCGCAGGGCGGAGAGGACTCGCTTCTCAGTTCAGCTCTaGAAGCGCAGCCGGGCGGGCGCCCGTGGTTTCCACCCCGCGGGT +
Preference number: 5 (lower is better)
Translates to: GGGRRAERTRFSVQL*KRSRAGARGFHPAG
Trigger: ACCCGCGGGGTGGAAACCACGGGCGCCCGCCCGGCTGCGCTTCCAGAGCTGAACTGAGAAGCGAGTCCTCTCCGCCCTGCGGCCACCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CCA 90 bp TCGCTTCTCAGTTCAGCTCTGGAAGCGCAGCCGGGCGGGCGCCCGTaGTTTCCACCCCGCGGGTCGAAGCGGGCTCGGGTGGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: SLLSSALEAQPGGRP*FPPRGSKRARVGFC
Trigger: GCAGAATCCCACCCGAGCCCGCTTCGACCCGCGGGGTGGAAACCACGGGCGCCCGCCCGGCTGCGCTTCCAGAGCTGAACTGAGAAGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS GCA 90 bp CCGTGGTTTCCACCCCGCGGGTCGAAGCGGGCTCGGGTGGGATTCTaGCACCTGTGGGCTCTGCTGTGTCGCCTTGAGCAAGATAATTCT +
Preference number: 5 (lower is better)
Translates to: PWFPPRGSKRARVGF*HLWALLCRLEQDNS
Trigger: AGAATTATCTTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCCCACCCGAGCCCGCTTCGACCCGCGGGGTGGAAACCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS TCA 90 bp ACACTTCAGAGGTCATTTATTCCCGACTTTACAAATGGATCACCGTaGCCACGTGTCGCCTGCCAGCGGGCGCGGTCCCGGGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: TLQRSFIPDFTNGSP*PRVACQRARSRACG
Trigger: CCCGCAGGCCCGGGACCGCGCCCGCTGGCAGGCGACACGTGGTCACGGTGATCCATTTGTAAAGTCGGGAATAAATGACCTCTGAAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371000.5
ENST00000541374.6
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCTTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGCTGGGTTTTCGGGCTTaGGGTCGGAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PLLSSTLYRSTSCLLSAWLGFRA*GRSPCS
Trigger: AGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAG...CCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR CAA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGCCAGTCATGACCACCTaGGGGGCCCTTTTACCTTGG +
Preference number: 5 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWPVMTT*GALLPW
Trigger: CCAAGGTAAAAGGGCCCCCAAGGTGGTCATGACTGG...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTCCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGPCPLS*QRPGEE
Trigger: CTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGG...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATTTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 5 (lower is better)
Translates to: SWLACPLAAARPMVAPRDLEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATTTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SWLACPLAAARPMVAPRDLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 90 bp TTTCCTGGGAGGCTGCCAAGTCACCAGAATGTTGTCCATGCCCTCTaGGTTTGCAGAGACCTGGCGAGGAGCCAGCAACCCTGCCTCACA +
Preference number: 5 (lower is better)
Translates to: FPGRLPSHQNVVHAL*VCRDLARSQQPCLT
Trigger: TGTGAGGCAGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGGACAACATTCTGGTGACTTGGCAGCCTCCCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS GCA 90 bp AGGGATCTTTCCTGGGAGGCTGCCAAGTCACCAGAATGTTGTCCATaGCCTCTGAGTTTGCAGAGACCTGGCGAGGAGCCAGCAACCCTG +
Preference number: 5 (lower is better)
Translates to: RDLSWEAAKSPECCP*PLSLQRPGEEPATL
Trigger: CAGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGGACAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGCCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PALQHLVQIHQLSALSLEPCPLS*QRPGEE
Trigger: CTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGG...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SWLACPLAAARPMVAPRDVQIHQ*SALSLE
Trigger: CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTAC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCCAGTCATGACCACCTaGGGGGCCCTTTTACCTTGG +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLPVMTT*GALLPW
Trigger: CCAAGGTAAAAGGGCCCCCAAGGTGGTCATGACTGG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATAGACGTGGCACTTTGTaGACAGCCATCAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: SWLACPLAAARPMVAPRDRRGTL*TAIREL
Trigger: AAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTCT...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CAA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCACCTTGGCTGTGAAATaGGATTCAGGTGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSTLAVK*DSGDSG
Trigger: CCCTGAATCACCTGAATCCAATTTCACAGCCAAGGT...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGCCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVPCPLS*QRPGEE
Trigger: CTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGG...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGTTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: APALQHLVQIHQLSALSLLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCCTGCTCTCCAGCACCTaGTACAGATCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCLLSST*YRSTSC
Trigger: ACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAG...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWELPRL*TAVTLA
Trigger: AGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTCCACTCAGTGGTGCTTaGTGCTTAGAGTTACCCAGG +
Preference number: 5 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAPLSGA*CLELPR
Trigger: CCTGGGTAACTCTAAGCACAAAGCACCACTGAGTGG...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CAA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCACCACTCAGTGGTGCTTaGTGCTTAGAGTTACCCAGG +
Preference number: 5 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPPLSGA*CLELPR
Trigger: CCTGGGTAACTCTAAGCACAAAGCACCACTGAGTGG...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGAGCACAAACGCCATCCAATaGGCTTTACCTTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: PLAAARPMVAPRDDSCWSTNAIQ*ALPCRQ
Trigger: TTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTGT...GCTCCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSADSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATAGAGGCCTGATGACCTaGGATTCCTTTTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SWLACPLAAARPMVAPRDRGLMT*DSFFPL
Trigger: CAAAGGGAAAAAGGAATCCAAGGTCATCAGGCCTCT...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCTGCTCTCCAGCACCTaGTACAGATCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLLLSST*YRSTSC
Trigger: ACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCCAGCTGCCCTTGATTaGCTGAAAGAGGATGAAGCC +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLPAALD*LKEDEA
Trigger: GGCTTCATCCTCTTTCAGCAAATCAAGGGCAGCTGG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp TGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGACAGCTGCTGGGTTCCTGCTTTCAAGTaGTCTGCAGTCCAACAGAGA +
Preference number: 5 (lower is better)
Translates to: CPLAAARPMVAPRDDSCWVPAFK*SAVQQR
Trigger: TCTCTGTTGGACTGCAGACAACTTGAAAGCAGGAAC...CCAGCAGCTGTCATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS CCA 90 bp CTCTCCATTCCACCACGTACTCCTGAACAGCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCAGAATGTTGTCCATGCCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: LSIPPRTPEQQRDLS*EAAKSPECCPCPLS
Trigger: ACTCAGAGGGCATGGACAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGAATGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 90 bp TATACAGACAACACTTCAGAGGTCATTTATTCCCGACTTTACAAATaGATCACCGTGACCACGTGTCGCCTGCCAGCGGGCGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: YTDNTSEVIYSRLYK*ITVTTCRLPAGAVP
Trigger: CGGGACCGCGCCCGCTGGCAGGCGACACGTGGTCACGGTGATCCATTTGTAAAGTCGGGAATAAATGACCTCTGAAGTGTTGTCTGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371000.5
ENST00000541374.6
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTTTCGGGCTTTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCACCTTGGCTGTGAAATaGGATTCAGGTGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: FSGFGSEPLLSSTLYRSTTLAVK*DSGDSG
Trigger: CCCTGAATCACCTGAATCCAATTTCACAGCCAAGGT...GGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAAAGCCCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR CAA 90 bp TTGGGTCGGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCAGAGGCCTGATGACCTaGGATTCCTTTTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: LGRSPCSPAPCTDPPVVCRGLMT*DSFFPL
Trigger: CAAAGGGAAAAAGGAATCCAAGGTCATCAGGCCTCT...GCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCCGACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGTTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 5 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVLEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp AGCTGGCTTGCCTGTCCTCTAGCTGCAGCCAGACCGATGGTGGCACCCAGAGATGCCAGGTTAAATTTTTaGGTCCACTTAGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: SWLACPLAAARPMVAPRDARLNF*VHLAVE
Trigger: CTCTACAGCTAAGTGGACCAAAAAATTTAACCTGGC...ATCTCTGGGTGCCACCATCGGTCTGGCTGCAGCTAGAGGACAGGCAAGCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTACCTTGGCTGTGAAATaGGATTCAGGTGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLTLAVK*DSGDSG
Trigger: CCCTGAATCACCTGAATCCAATTTCACAGCCAAGGT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLELPRL*TAVTLA
Trigger: AGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGAACTGCCTTTTGAATTaGCTGCAGACACAGCCACAG +
Preference number: 5 (lower is better)
Translates to: APALQHLVQIHQLSALSLNCLLN*LQTQPQ
Trigger: CTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTT...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACPCPLS*QRPGEE
Trigger: CTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTCAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLQVTRM*SMPSEF
Trigger: AAACTCAGAGGGCATGGACAACATTCTGGTGACTTG...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GGAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: GAPALQHLVQIHQLSALSENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...GCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp AGAAAGGGAGATGTGCTGAGGCTCCAGTTCTTCCAGAGAGTCAGCGAGAGGTGCGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RKGDVLRLQFFQRVSERCGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...GCACCTCTCGCTGACTCTCTGGAAGAACTGGAGCCTCAGCACATCTCCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS CCA 90 bp AGGCGCGATAAAATCGTGTGCTCAGCGTTCACAGCCATAGAGACGTaGCACTTTGTTGACAGCCATCAGGGAACTTTCCTCGCAGATGTC +
Preference number: 5 (lower is better)
Translates to: RRDKIVCSAFTAIET*HFVDSHQGTFLADV
Trigger: GACATCTGCGAGGAAAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTCTCTATGGCTGTGAACGCTGAGCACACGATTTTATCGCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CAA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGTGCAGACAAACAAGGTaGTACCAAGGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: APCTDPPVVCSQLGELLECRQTR*YQGEDL
Trigger: CAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCA...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLAAGCL*DVNFGR
Trigger: TCTCCCAAAATTCACATCCAATAAACAGCCTGCAGC...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTCCAATTGGCTTTACCTaGCAGACAAAATTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAPIGFT*QTKFPL
Trigger: GAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTGG...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CAA 90 bp CTGGGGGAATTGGGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTACAAACGCCATCCAATaGGCTTTACCTTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: LGELGQAVLVEGTLTLRLTNAIQ*ALPCRQ
Trigger: TTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTGT...AAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCCCAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCAGGGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: WGHLMKDFTDDQRFRIFRDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...CCTGAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CAA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGAGGCCTGATGACCTaGGATTCCTTTTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: PALQHLVQIHQLSALSLERGLMT*DSFFPL
Trigger: CAAAGGGAAAAAGGAATCCAAGGTCATCAGGCCTCT...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp TTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGGTGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LYRSTSCLLSAWRALGGGVQIHQ*SALSLE
Trigger: CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTAC...ACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACCTGCTCTCCAGCACCTaGTACAGATCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNLLSST*YRSTSC
Trigger: ACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAG...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCTGGGTTTTCGGGCTTaGGGTCGGAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNLGFRA*GRSPCS
Trigger: AGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACACTGGGTTTTCGGGCTTaGGGTCGGAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTLGFRA*GRSPCS
Trigger: AGAGCAGGGGCTCCGACCCAAAGCCCGAAAACCCAG...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCCCAGTCATGACCACCTaGGGGGCCCTTTTACCTTGG +
Preference number: 5 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACPVMTT*GALLPW
Trigger: CCAAGGTAAAAGGGCCCCCAAGGTGGTCATGACTGG...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 90 bp AATCGTGTGCTCAGCGTTCACAGCCATAGAGACGTGGCACTTTGTTaGCAGCCATCAGGGAACTTTCCTCGCAGATGTCCTTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: NRVLSVHSHRDVALC*QPSGNFPRRCPFSV
Trigger: CACAGAGAAAGGACATCTGCGAGGAAAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTCTCTATGGCTGTGAACGCTGAGCACACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS GCA 90 bp CTCTTTCCCAGGTGCAGGCCACAGTCCCCTGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCTGTTCTGGAGCAACACCAACGAAGA +
Preference number: 5 (lower is better)
Translates to: LFPRCRPQSPVLPSV*RINFEAVLEQHQRR
Trigger: TCTTCGTTGGTGTTGCTCCAGAACAGCCTCAAAATTTATCCTGCATACAGAAGGGAGAACAGGGGACTGTGGCCTGCACCTGGGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGATAGTGAAAGCAGCCTaGTCTGGGCTTCAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: APCTDPPVVCSQLGELLEIVKAA*SGLQRA
Trigger: TGCTCTTTGAAGCCCAGACAAGGCTGCTTTCACTAT...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp GAGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTGCCAGGTTAAATTTTTaGGTCCACTTAGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: EPLLSSTLYRSTSCLLSAARLNF*VHLAVE
Trigger: CTCTACAGCTAAGTGGACCAAAAAATTTAACCTGGC...AGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp CAGCCCTTTACAAGACACCCGAGATTCAGAGTGGGAGGCTGGGTTGCCCAAGGTGCCAGGTTAAATTTTTaGGTCCACTTAGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: QPFTRHPRFRVGGWVAQGARLNF*VHLAVE
Trigger: CTCTACAGCTAAGTGGACCAAAAAATTTAACCTGGC...ACCTTGGGCAACCCAGCCTCCCACTCTGAATCTCGGGTGTCTTGTAAAGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGACCTTGGCTGTGAAATaGGATTCAGGTGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVTLAVK*DSGDSG
Trigger: CCCTGAATCACCTGAATCCAATTTCACAGCCAAGGT...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGTTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: APALQHLVQIHQLSALSLLTAVT*AVKLDS
Trigger: TGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAA...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLPCPLS*QRPGEE
Trigger: CTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSPCPLS*QRPGEE
Trigger: CTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGCAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: APCTDPPVVCSQLGELLEQVTRM*SMPSEF
Trigger: AAACTCAGAGGGCATGGACAACATTCTGGTGACTTG...CTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCCACTCAGTGGTGCTTaGTGCTTAGAGTTACCCAGG +
Preference number: 5 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAPLSGA*CLELPR
Trigger: CCTGGGTAACTCTAAGCACAAAGCACCACTGAGTGG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SPCSPAPCTDPPVVCSQLAAGCL*DVNFGR
Trigger: TCTCCCAAAATTCACATCCAATAAACAGCCTGCAGC...AAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGACAAACGCCATCCAATaGGCTTTACCTTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: PALQHLVQIHQLSALSLETNAIQ*ALPCRQ
Trigger: TTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTGT...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS TCA 90 bp CCACAGGACATATGTCACTCGGGGCTGCAGGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTAGGGAATTTCACAGAGCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PQDICHSGLQAVYWM*ILGDSVGNFTELRL
Trigger: CAGCCTCAGCTCTGTGAAATTCCCTACAGAGTCTCCCAAAATTCACATCCAATAAACAGCCTGCAGCCCCGAGTGACATATGTCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 90 bp GCGCAAGTGCTATTTGCTGGATCTGGAATTTCTCTGCTACACCACTaGGGTCTGAGGGCTGCTAGGAGAACAAACACCTTTTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AQVLFAGSGISLLHH*GLRAARRTNTFCWK
Trigger: CTTCCAGCAAAAGGTGTTTGTTCTCCTAGCAGCCCTCAGACCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS GCA 90 bp GAGTATACTCAGTGTATAAGTGGGTGTCTCGTCCTCTTTCCCAGGTaGAGGCCACAGTCCCCTGTTCTCCCTTCTGTATGCAGGATAAAT +
Preference number: 5 (lower is better)
Translates to: EYTQCISGCLVLFPR*RPQSPVLPSVCRIN
Trigger: ATTTATCCTGCATACAGAAGGGAGAACAGGGGACTGTGGCCTGCACCTGGGAAAGAGGACGAGACACCCACTTATACACTGAGTATACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 90 bp GCCAATGAGCATCCTCTAAAAGTATGTGCCATCAACAATCAACTCTaGTATAGAACTCCGTATTCTTCCACGTGTCGCCTGCCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: ANEHPLKVCAINNQL*YRTPYSSTCRLPAG
Trigger: GCCCGCTGGCAGGCGACACGTGGAAGAATACGGAGTTCTATACCAGAGTTGATTGTTGATGGCACATACTTTTAGAGGATGCTCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CAA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTATTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTTTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCCAGTCATGACCACCTaGGGGGCCCTTTTACCTTGG +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNPVMTT*GALLPW
Trigger: CCAAGGTAAAAGGGCCCCCAAGGTGGTCATGACTGG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCAGTCATGACCACCTaGGGGGCCCTTTTACCTTGG +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGPVMTT*GALLPW
Trigger: CCAAGGTAAAAGGGCCCCCAAGGTGGTCATGACTGG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCGACTTCTCCACTAGTTaGGCAGAAGTGCCTATGGTG +
Preference number: 5 (lower is better)
Translates to: RYILRLLQMRPVMTTLGADFSTS*AEVPMV
Trigger: CACCATAGGCACTTCTGCCAAACTAGTGGAGAAGTC...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGATCTGAGGAGGTGGCCTaGTCTGTCATGGTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARSEEVA*SVMVCA
Trigger: GGCACAAACCATGACAGACAAGGCCACCTCCTCAGA...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS GCA 90 bp AGGTGCGTTTATGCACCAAGATATGATAGGCGCGATAAAATCGTGTaGTCAGCGTTCACAGCCATAGAGACGTGGCACTTTGTTGACAGC +
Preference number: 5 (lower is better)
Translates to: RCVYAPRYDRRDKIV*SAFTAIETWHFVDS
Trigger: GCTGTCAACAAAGTGCCACGTCTCTATGGCTGTGAACGCTGAGCACACGATTTTATCGCGCCTATCATATCTTGGTGCATAAACGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CCA 90 bp CTTCTCCTCTGCAATGGGATATTTCTTAGCGCAAGTGCTATTTGCTaGATCTGGAATTTCTCTGCTACACCACTGAGGTCTGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLLCNGIFLSASAIC*IWNFSATPLRSEGC
Trigger: GCAGCCCTCAGACCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCTAAGAAATATCCCATTGCAGAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCCTCTGCTGTGTCGCCTaGAGCAAGATAATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: RYILRLLQMRPVMTTLGALCCVA*SKIILS
Trigger: AGAGAGAATTATCTTGCTCAAGGCGACACAGCAGAG...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CAA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATAGTGAAAGCAGCCTaGTCTGGGCTTCAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PRPARKRYILRLLQMRPVIVKAA*SGLQRA
Trigger: TGCTCTTTGAAGCCCAGACAAGGCTGCTTTCACTAT...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGATGCAGACAAACAAGGTaGTACCAAGGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: ELPRPARKRYILRLLQMRCRQTR*YQGEDL
Trigger: CAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCA...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGCAGACAAACAAGGTaGTACCAAGGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACCRQTR*YQGEDL
Trigger: CAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCA...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCTTGGAGGTGTTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: PCTDPPVVCSQLGELLEVLTAVT*AVKLDS
Trigger: TGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAA...CACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp AACTGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: NWGHLMKDFTDDQRFRIFELPRL*TAVTLA
Trigger: AGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTC...GAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CAA 90 bp GCCCCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: APALQHLVQIHQLSALSLAHRSL*KFDSNV
Trigger: GACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGC...CAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp GGGCAGGCTGTGCTGGTTGAGGGCACACTGACTTTAAGGCTTGAAGCCTCACCAGAAAAGAGAAATCTGTaGTCTACTGTAGTCAATGTG +
Preference number: 5 (lower is better)
Translates to: GQAVLVEGTLTLRLEASPEKRNL*STVVNV
Trigger: CACATTGACTACAGTAGACAACAGATTTCTCTTTTC...TGGTGAGGCTTCAAGCCTTAAAGTCAGTGTGCCCTCAACCAGCACAGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AACTGGGGTCACTTGATGAAGGACTTCACTGATGACCAGCGGTTCAGGATCTTCCAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: NWGHLMKDFTDDQRFRIFQVTRM*SMPSEF
Trigger: AAACTCAGAGGGCATGGACAACATTCTGGTGACTTG...GAAGATCCTGAACCGCTGGTCATCAGTGAAGTCCTTCATCAAGTGACCCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371000.5
CDS-3UTR CAA 90 bp GCAGAGGACCAGCTCAATATCTTCTCCGGGAATGAAAGCTGTGCCTTTGGGAACCCAATTGGCTTTACCTaGCAGACAAAATTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: AEDQLNIFSGNESCAFGNPIGFT*QTKFPL
Trigger: GAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTGG...GTTCCCAAAGGCACAGCTTTCATTCCCGGAGAAGATATTGAGCTGGTCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCAGAGGCCTGATGACCTaGGATTCCTTTTTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: PRPARKRYILRLLQMRPVRGLMT*DSFFPL
Trigger: CAAAGGGAAAAAGGAATCCAAGGTCATCAGGCCTCT...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGTTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 5 (lower is better)
Translates to: FKLESLGPHSEGCNFKALLEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLLEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATTGTCTGCTCTCAGCTaGGAGAGCTCTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLSALS*ESSWRW
Trigger: CCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACAA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVVQIHQ*SALSLE
Trigger: CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTAC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTCTGCTCTCCAGCACCTaGTACAGATCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SSQEVLLNSTDLLCTACCLLSST*YRSTSC
Trigger: ACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAG...ACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTCTTCCAGGCTCAACTaGAGCTGGCAGAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSSSRLN*SWQRTS
Trigger: GCTGGTCCTCTGCCAGCTCAAGTTGAGCCTGGAAGA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS GCA 90 bp TGTCTTCTCCTCTGCAATGGGATATTTCTTAGCGCAAGTGCTATTTaGTGGATCTGGAATTTCTCTGCTACACCACTGAGGTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: CLLLCNGIFLSASAI*WIWNFSATPLRSEG
Trigger: GCCCTCAGACCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCTAAGAAATATCCCATTGCAGAGGAGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 90 bp ATCCAATTGGCTTTACCTTGCAGACAAAATTCCCTCTCATTTCCGTaGGAACTTTCACCAGCAGCTGTCAGAGCTGTCATCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: IQLALPCRQNSLSFP*ELSPAAVRAVIHRT
Trigger: TGTCCTGTGGATGACAGCTCTGACAGCTGCTGGTGAAAGTTCCCACGGAAATGAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAACCTTGGCTGTGAAATaGGATTCAGGTGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: ELPRPARKRYILRLLQMRTLAVK*DSGDSG
Trigger: CCCTGAATCACCTGAATCCAATTTCACAGCCAAGGT...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCTGCTCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGGAAAAGAGAAATCTGTaGTCTACTGTAGTCAATGTG +
Preference number: 5 (lower is better)
Translates to: PALQHLVQIHQLSALSLEEKRNL*STVVNV
Trigger: CACATTGACTACAGTAGACAACAGATTTCTCTTTTC...CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAAACTGCCTTTTGAATTaGCTGCAGACACAGCCACAG +
Preference number: 5 (lower is better)
Translates to: ELPRPARKRYILRLLQMRNCLLN*LQTQPQ
Trigger: CTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTT...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCACTCAGTGGTGCTTaGTGCTTAGAGTTACCCAGG +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGPLSGA*CLELPR
Trigger: CCTGGGTAACTCTAAGCACAAAGCACCACTGAGTGG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262345.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: PRPARKRYILRLLQMRPVAAGCL*DVNFGR
Trigger: TCTCCCAAAATTCACATCCAATAAACAGCCTGCAGC...GACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAAAGCL*DVNFGR
Trigger: TCTCCCAAAATTCACATCCAATAAACAGCCTGCAGC...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCACAAACGCCATCCAATaGGCTTTACCTTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: RYILRLLQMRPVMTTLGATNAIQ*ALPCRQ
Trigger: TTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTGT...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACATTCTTAGACTTCTGCAAATGAGACCAGTCATGACCACCTTGGGGGCCGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: RYILRLLQMRPVMTTLGAENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...GGCCCCCAAGGTGGTCATGACTGGTCTCATTTGCAGAAGTCTAAGAATGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTTGGAGGTGGTGGGCTaGAGGCACTGTGCATCATGT +
Preference number: 5 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVLEVVG*RHCASC
Trigger: ACATGATGCACAGTGCCTCAAGCCCACCACCTCCAA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSVQIHQ*SALSLE
Trigger: CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTAC...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDVQIHQ*SALSLE
Trigger: CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTAC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCTGCTCTCCAGCACCTaGTACAGATCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLLLSST*YRSTSC
Trigger: ACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACTGCTCTCCAGCACCTaGTACAGATCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSLLSST*YRSTSC
Trigger: ACAACTGGTGGATCTGTACAAGGTGCTGGAGAGCAG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCAGCTGTGTCTTCTCCTaGCAGACAAAATTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACSCVFS*QTKFPL
Trigger: GAGAGGGAATTTTGTCTGCAAGGAGAAGACACAGCT...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541374.6
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCATGAAAGCTGTGCCTTaGGGAACAGGGGACAGACCA +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLMKAVP*GTGDRP
Trigger: TGGTCTGTCCCCTGTTCCCAAAGGCACAGCTTTCAT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS TCA 90 bp AGGAAGAGGCCTCACTATGTCCAAGAATGTGAATGTGGATGGAAGTaGAGAGGAGCTTCCAAGACTATTGACAGCAGTAACCTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: RKRPHYVQECECGWK*RGASKTIDSSNLGC
Trigger: ACAGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTCACATTCTTGGACATAGTGAGGCCTCTTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 90 bp ACACAGGTTCATTATGTTAATACGAGTGGGCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGCCACAGCCCAATTTCCGGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: TQVHYVNTSGQRTAF*ICCRHSHSPISGSR
Trigger: CCTAGAACCGGAAATTGGGCTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTGCCCACTCGTATTAACATAATGAACCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGAGACGTGGCACTTTGTaGACAGCCATCAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: FKLESLGPHSEGCNFKALRRGTL*TAIREL
Trigger: AAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTCT...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACTCTGCTGTGTCGCCTaGAGCAAGATAATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARLCCVA*SKIILS
Trigger: AGAGAGAATTATCTTGCTCAAGGCGACACAGCAGAG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCATGCAGACAAACAAGGTaGTACCAAGGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSCRQTR*YQGEDL
Trigger: CAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCA...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTGCAGACAAACAAGGTaGTACCAAGGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNCRQTR*YQGEDL
Trigger: CAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCCAGCACCTTGTACAGATCCACCAGTTGTCTGCTCTCAGCTTGGAGAGCTCAAATCATGTCTTCCTTaGGCCTTTGTAACATTAACC +
Preference number: 5 (lower is better)
Translates to: SPAPCTDPPVVCSQLGELKSCLP*AFVTLT
Trigger: GGTTAATGTTACAAAGGCCAAAGGAAGACATGATTT...GAGCTCTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTACAAGGTGCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371000.5
ENST00000541374.6
CDS-3UTR CAA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAAACTGCCTTTTGAATTaGCTGCAGACACAGCCACAG +
Preference number: 5 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVNCLLN*LQTQPQ
Trigger: CTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTT...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGACAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARQVTRM*SMPSEF
Trigger: AAACTCAGAGGGCATGGACAACATTCTGGTGACTTG...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCGATTCCTTTTTCCCTTaGTGGCCAGTTGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCDSFFP*WPVGAG
Trigger: CCCTGCTCCAACTGGCCACAAAGGGAAAAAGGAATC...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGTACAGATCCACCAGTaGTCTGCTCTCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSVQIHQ*SALSLE
Trigger: CTCCAAGCTGAGAGCAGACAACTGGTGGATCTGTAC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGATCTCAGGAAGTTCTGTaGAACAGTACTGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: ELPRPARKRYILRLLQMRSQEVL*NSTDLL
Trigger: CAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTAGAGGAAAGGAACCATaGGGGGTGCCGCACAATAAT +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGRGKEP*GVPHNN
Trigger: ATTATTGTGCGGCACCCCCAATGGTTCCTTTCCTCT...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS TCA 90 bp GTGCTTAGAGTTACCCAGGATGGAGCTGCATCCTCCTTGATCCCCTaGGAGTGCATACACACGGATTTCATAACAGATGTAGGATTTTAT +
Preference number: 5 (lower is better)
Translates to: VLRVTQDGAASSLIP*ECIHTDFITDVGFY
Trigger: ATAAAATCCTACATCTGTTATGAAATCCGTGTGTATGCACTCTCAGGGGATCAAGGAGGATGCAGCTCCATCCTGGGTAACTCTAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGTCACATCGCCTCTCTaGCACGCATCTATTTTTGCT +
Preference number: 5 (lower is better)
Translates to: FKLESLGPHSEGCNFKALVTSPL*HASIFA
Trigger: AGCAAAAATAGATGCGTGCAAGAGAGGCGATGTGAC...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACATAGTGAAAGCAGCCTaGTCTGGGCTTCAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNIVKAA*SGLQRA
Trigger: TGCTCTTTGAAGCCCAGACAAGGCTGCTTTCACTAT...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTCAAGTTGGAGTCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGATAGTGAAAGCAGCCTaGTCTGGGCTTCAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: FKLESLGPHSEGCNFKALIVKAA*SGLQRA
Trigger: TGCTCTTTGAAGCCCAGACAAGGCTGCTTTCACTAT...CAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGACTCCAACTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCTGCAGACAAACAAGGTaGTACCAAGGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCCRQTR*YQGEDL
Trigger: CAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCA...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCACCTTGGCTGTGAAATaGGATTCAGGTGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLTLAVK*DSGDSG
Trigger: CCCTGAATCACCTGAATCCAATTTCACAGCCAAGGT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLELPRL*TAVTLA
Trigger: AGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTC...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNELPRL*TAVTLA
Trigger: AGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACAACTGCCTTTTGAATTaGCTGCAGACACAGCCACAG +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNNCLLN*LQTQPQ
Trigger: CTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTT...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCACAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSQVTRM*SMPSEF
Trigger: AAACTCAGAGGGCATGGACAACATTCTGGTGACTTG...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCCAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLQVTRM*SMPSEF
Trigger: AAACTCAGAGGGCATGGACAACATTCTGGTGACTTG...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTACCAATTGGCTTTACCTaGCAGACAAAATTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVPIGFT*QTKFPL
Trigger: GAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTGG...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAACAAACGCCATCCAATaGGCTTTACCTTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARTNAIQ*ALPCRQ
Trigger: TTGTCTGCAAGGTAAAGCCAATTGGATGGCGTTTGT...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCTGTGTAGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: SQEVLLNSTDLLCTACCVENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...TACACAGCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGATCTCAGGAAGTTCTGTaGAACAGTACTGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARSQEVL*NSTDLL
Trigger: CAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCGGGGGCCCTTTTACCTaGGTGTTTACCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVGGPFT*VFTSVF
Trigger: AAAGACACTGGTAAACACCAAGGTAAAAGGGCCCCC...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGCCAGGTTAAATTTTTaGGTCCACTTAGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKARARLNF*VHLAVE
Trigger: CTCTACAGCTAAGTGGACCAAAAAATTTAACCTGGC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSELPRL*TAVTLA
Trigger: AGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCAACTGCCTTTTGAATTaGCTGCAGACACAGCCACAG +
Preference number: 5 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVNCLLN*LQTQPQ
Trigger: CTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTT...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNAAGCL*DVNFGR
Trigger: TCTCCCAAAATTCACATCCAATAAACAGCCTGCAGC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACCCAATTGGCTTTACCTaGCAGACAAAATTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNPIGFT*QTKFPL
Trigger: GAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTGG...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCAATTGGCTTTACCTaGCAGACAAAATTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGPIGFT*QTKFPL
Trigger: GAGAGGGAATTTTGTCTGCAAGGTAAAGCCAATTGG...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACATCTCAGGAAGTTCTGTaGAACAGTACTGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTSQEVL*NSTDLL
Trigger: CAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGA...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGCCAGGTTAAATTTTTaGGTCCACTTAGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDARLNF*VHLAVE
Trigger: CTCTACAGCTAAGTGGACCAAAAAATTTAACCTGGC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACTTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDLTAVT*AVKLDS
Trigger: TGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAA...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GTGTACAGCCTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTTTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: VYSLLCSRCFRNSHCMNGLTAVT*AVKLDS
Trigger: TGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAA...ACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAGGCTGTACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GAGCTACCACGCCCGGCCAGAAAAAGGTACATTCTTAGACTTCTGCAAATGAGAGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: ELPRPARKRYILRLLQMRAHRSL*KFDSNV
Trigger: GACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGC...TCTCATTTGCAGAAGTCTAAGAATGTACCTTTTTCTGGCCGGGCGTGGTAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CCATCATCTCAGGAAGTTCTGTTGAACAGTACTGATCTGCTGTGTACAGCCTGCGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: PSSQEVLLNSTDLLCTACAHRSL*KFDSNV
Trigger: GACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGC...GCAGGCTGTACACAGCAGATCAGTACTGTTCAACAGAACTTCCTGAGATGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGAAAACTGGGGTCACTaGATGAAGGACTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSENWGH*MKDFTD
Trigger: ATCAGTGAAGTCCTTCATCAAGTGACCCCAGTTTTC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTGCCAGGTTAAATTTTTaGGTCCACTTAGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSARLNF*VHLAVE
Trigger: CTCTACAGCTAAGTGGACCAAAAAATTTAACCTGGC...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TGCATGAATGGTCCTCTAGACTGTATGCCATTACTACTAAGAGCTGTGGTTTCTTTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: CMNGPLDCMPLLLRAVVSLTAVT*AVKLDS
Trigger: TGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAA...AGAAACCACAGCTCTTAGTAGTAATGGCATACAGTCTAGAGGACCATTCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVLTAVT*AVKLDS
Trigger: TGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAA...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCTCTAGGTCCACACAGTGAAGGATGTAATTTTAAGGCCCTGGGAAAGGCAAGAGAAAAGAGAAATCTGTaGTCTACTGTAGTCAATGTG +
Preference number: 5 (lower is better)
Translates to: SLGPHSEGCNFKALGKAREKRNL*STVVNV
Trigger: CACATTGACTACAGTAGACAACAGATTTCTCTTTTC...TCTTGCCTTTCCCAGGGCCTTAAAATTACATCCTTCACTGTGTGGACCTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACTGTTCCAAGTCCATGTaGTGGAAAAGAGAGTTATCT +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNCSKSM*WKRELS
Trigger: AGATAACTCTCTTTTCCACAACATGGACTTGGAACA...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS TCA 90 bp AAGACTATTGACAGCAGTAACCTTGGCTGTGAAATTGGATTCAGGTaGTTCAGGGGTGAGGTTGATTCCAAAGTCCAAATAGTCACAATA +
Preference number: 5 (lower is better)
Translates to: KTIDSSNLGCEIGFR*FRGEVDSKVQIVTI
Trigger: TATTGTGACTATTTGGACTTTGGAATCAACCTCACCCCTGAATCACCTGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAATAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCATAGTGAAAGCAGCCTaGTCTGGGCTTCAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFIVKAA*SGLQRA
Trigger: TGCTCTTTGAAGCCCAGACAAGGCTGCTTTCACTAT...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTAHRSL*KFDSNV
Trigger: GACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GACAGTGAGTGCAGAGGTAGAACATTTCCATCATCTCAGGAAGTTCTGTTGAACGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: DSECRGRTFPSSQEVLLNAHRSL*KFDSNV
Trigger: GACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGC...GTTCAACAGAACTTCCTGAGATGATGGAAATGTTCTACCTCTGCACTCACTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTGCTGTGTAGCAGGTGCTTTAGAAATAGTCATTGCATGAATGGTCCTCTAGACGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: LLCSRCFRNSHCMNGPLDAHRSL*KFDSNV
Trigger: GACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGC...GTCTAGAGGACCATTCATGCAATGACTATTTCTAAAGCACCTGCTACACAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTCCTCCTCATTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAAATCATGTCTTCCTTaGGCCTTTGTAACATTAACC +
Preference number: 5 (lower is better)
Translates to: LLLISLSGQHTKKVTRNSKSCLP*AFVTLT
Trigger: GGTTAATGTTACAAAGGCCAAAGGAAGACATGATTT...TGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAATGAGGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAAAATCATGTCTTCCTTaGGCCTTTGTAACATTAACC +
Preference number: 5 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTKSCLP*AFVTLT
Trigger: GGTTAATGTTACAAAGGCCAAAGGAAGACATGATTT...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp TCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCAAATCATGTCTTCCTTaGGCCTTTGTAACATTAACC +
Preference number: 5 (lower is better)
Translates to: SLSGQHTKKVTRNSSWSLKSCLP*AFVTLT
Trigger: GGTTAATGTTACAAAGGCCAAAGGAAGACATGATTT...GAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp GCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCTCTAGGTCCACAGAAAAGAGAAATCTGTaGTCTACTGTAGTCAATGTG +
Preference number: 5 (lower is better)
Translates to: ASIPRKLLGIQVGVSRSTEKRNL*STVVNV
Trigger: CACATTGACTACAGTAGACAACAGATTTCTCTTTTC...TGTGGACCTAGAGACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 90 bp GCCAATGAGCATCCTCTAAAAGTATGTGCCATCAACAATCAACTCTaGTATAGAACTCCGTATTCTTCAGAGATATGTTTTACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: ANEHPLKVCAINNQL*YRTPYSSEICFTGS
Trigger: GCTACCAGTAAAACATATCTCTGAAGAATACGGAGTTCTATACCAGAGTTGATTGTTGATGGCACATACTTTTAGAGGATGCTCATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371000.5
ENST00000541374.6
ENST00000674203.2
CDS-3UTR CAA 90 bp AGGTACTATGGTACTATGGTGAGTTTACAATATAGGTCTTCACCATCCAGCTGCAAATCATGTCTTCCTTaGGCCTTTGTAACATTAACC +
Preference number: 5 (lower is better)
Translates to: RYYGTMVSLQYRSSPSSCKSCLP*AFVTLT
Trigger: GGTTAATGTTACAAAGGCCAAAGGAAGACATGATTT...GCAGCTGGATGGTGAAGACCTATATTGTAAACTCACCATAGTACCATAGTACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTGGCCAGCATACCAAGAAAGTTACTAGGAATTCAAGTTGGAGTCGAAAAGAGAAATCTGTaGTCTACTGTAGTCAATGTG +
Preference number: 5 (lower is better)
Translates to: FPFLASIPRKLLGIQVGVEKRNL*STVVNV
Trigger: CACATTGACTACAGTAGACAACAGATTTCTCTTTTC...GACTCCAACTTGAATTCCTAGTAACTTTCTTGGTATGCTGGCCAGAAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS-3UTR CAA 90 bp CTTTTATCCTGTTCTTTAGGGAAGAGCATTATTAGCAGTTTAGACCAAGACTTCGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LLSCSLGKSIISSLDQDFAAGCL*DVNFGR
Trigger: TCTCCCAAAATTCACATCCAATAAACAGCCTGCAGC...GAAGTCTTGGTCTAAACTGCTAATAATGCTCTTCCCTAAAGAACAGGATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674203.2
CDS GCA 72 bp GCTCTGGGCCGCACGTGTCGCGCTCTCCGCGCTCTCTaGCGGCGCTCGGGCGTTCCCGGTGCCAGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: ALGRTCRALRAL*RRSGVPGASAR
Trigger: GCGGGCGCTGGCACCGGGAACGCCCGAGCGCCGGCAGAGAGCGCGGAGAGCGCGACACGTGCGGCCCAGAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CCA 72 bp AGTTCAGCTCTGGAAGCGCAGCCGGGCGGGCGCCCGTaGTTTCCACCCCGCGGGTCGAAGCGGGCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: SSALEAQPGGRP*FPPRGSKRARV
Trigger: CACCCGAGCCCGCTTCGACCCGCGGGGTGGAAACCACGGGCGCCCGCCCGGCTGCGCTTCCAGAGCTGAACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS GCA 72 bp CCACCCCGCGGGTCGAAGCGGGCTCGGGTGGGATTCTaGCACCTGTGGGCTCTGCTGTGTCGCCTTGAGCAA +
Preference number: 6 (lower is better)
Translates to: PPRGSKRARVGF*HLWALLCRLEQ
Trigger: TTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCCCACCCGAGCCCGCTTCGACCCGCGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS TCA 72 bp AGGTCATTTATTCCCGACTTTACAAATGGATCACCGTaGCCACGTGTCGCCTGCCAGCGGGCGCGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: RSFIPDFTNGSP*PRVACQRARSR
Trigger: CCGGGACCGCGCCCGCTGGCAGGCGACACGTGGTCACGGTGATCCATTTGTAAAGTCGGGAATAAATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371000.5
ENST00000541374.6
ENST00000648487.1
ENST00000674203.2
CDS CCA 72 bp GGGTCGAAGCGGGCTCGGGTGGGATTCTGCCACCTGTaGGCTCTGCTGTGTCGCCTTGAGCAAGATAATTCT +
Preference number: 6 (lower is better)
Translates to: GSKRARVGFCHL*ALLCRLEQDNS
Trigger: AGAATTATCTTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCCCACCCGAGCCCGCTTCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CAA 90 bp ACAGCAGAGGGATCTTTCCTGGGAGGCTGCCAAGTCACCAGAATGTaGTCCATGCCCTCTGAGTTTGCAGAGACCTGGCGAGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: TAEGSFLGGCQVTRM*SMPSEFAETWRGAS
Trigger: GCTGGCTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGGACAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS GCA 72 bp TCCTGGGAGGCTGCCAAGTCACCAGAATGTTGTCCATaGCCTCTGAGTTTGCAGAGACCTGGCGAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: SWEAAKSPECCP*PLSLQRPGEEP
Trigger: TGGCTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGGACAACATTCTGGTGACTTGGCAGCCTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 72 bp GCCAAGTCACCAGAATGTTGTCCATGCCCTCTGAGTTaGCAGAGACCTGGCGAGGAGCCAGCAACCCTGCCT +
Preference number: 6 (lower is better)
Translates to: AKSPECCPCPLS*QRPGEEPATLP
Trigger: AGGCAGGGTTGCTGGCTCCTCGCCAGGTCTCTGCAAACTCAGAGGGCATGGACAACATTCTGGTGACTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 72 bp CCTGGATGGAGCTCTCTCCATTCCACCACGTACTCCTaGACAGCAGAGGGATCTTTCCTGGGAGGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: PGWSSLHSTTYS*TAEGSFLGGCQ
Trigger: TTGGCAGCCTCCCAGGAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGGAATGGAGAGAGCTCCATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp GGGCTCGGGTGGGATTCTGCCACCTGTGGGCTCTGCTGTGTCGCCTaGAGCAAGATAATTCTCTCTCCACCGTCAGTTTCCCCTCATATA +
Preference number: 6 (lower is better)
Translates to: GLGWDSATCGLCCVA*SKIILSPPSVSPHI
Trigger: TATATGAGGGGAAACTGACGGTGGAGAGAGAATTATCTTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCCCACCCGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS GCA 72 bp CAGTGTATAAGTGGGTGTCTCGTCCTCTTTCCCAGGTaGAGGCCACAGTCCCCTGTTCTCCCTTCTGTATGC +
Preference number: 6 (lower is better)
Translates to: QCISGCLVLFPR*RPQSPVLPSVC
Trigger: GCATACAGAAGGGAGAACAGGGGACTGTGGCCTGCACCTGGGAAAGAGGACGAGACACCCACTTATACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 72 bp CCACCACGTACTCCTGAACAGCAGAGGGATCTTTCCTaGGAGGCTGCCAAGTCACCAGAATGTTGTCCATGC +
Preference number: 6 (lower is better)
Translates to: PPRTPEQQRDLS*EAAKSPECCPC
Trigger: GCATGGACAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGATCCCTCTGCTGTTCAGGAGTACGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 72 bp TGGGATTCTGCCACCTGTGGGCTCTGCTGTGTCGCCTaGAGCAAGATAATTCTCTCTCCACCGTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: WDSATCGLCCVA*SKIILSPPSVS
Trigger: GGAAACTGACGGTGGAGAGAGAATTATCTTGCTCAAGGCGACACAGCAGAGCCCACAGGTGGCAGAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS TCA 72 bp CTCAGCGTTCACAGCCATAGAGACGTGGCACTTTGTTaGCAGCCATCAGGGAACTTTCCTCGCAGATGTCCT +
Preference number: 6 (lower is better)
Translates to: LSVHSHRDVALC*QPSGNFPRRCP
Trigger: AGGACATCTGCGAGGAAAGTTCCCTGATGGCTGTCAACAAAGTGCCACGTCTCTATGGCTGTGAACGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CCA 72 bp AACACTTCAGAGGTCATTTATTCCCGACTTTACAAATaGATCACCGTGACCACGTGTCGCCTGCCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: NTSEVIYSRLYK*ITVTTCRLPAG
Trigger: GCCCGCTGGCAGGCGACACGTGGTCACGGTGATCCATTTGTAAAGTCGGGAATAAATGACCTCTGAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371000.5
ENST00000541374.6
ENST00000648487.1
ENST00000674203.2
CDS GCA 72 bp AGGTGCAGGCCACAGTCCCCTGTTCTCCCTTCTGTATaGAGGATAAATTTTGAGGCTGTTCTGGAGCAACAC +
Preference number: 6 (lower is better)
Translates to: RCRPQSPVLPSV*RINFEAVLEQH
Trigger: GTGTTGCTCCAGAACAGCCTCAAAATTTATCCTGCATACAGAAGGGAGAACAGGGGACTGTGGCCTGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 72 bp GTTACCCAGGATGGAGCTGCATCCTCCTTGATCCCCTaGGAGTGCATACACACGGATTTCATAACAGATGTA +
Preference number: 6 (lower is better)
Translates to: VTQDGAASSLIP*ECIHTDFITDV
Trigger: TACATCTGTTATGAAATCCGTGTGTATGCACTCTCAGGGGATCAAGGAGGATGCAGCTCCATCCTGGGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000648487.1
ENST00000674203.2
CDS GCA 72 bp TCTCATAAGACGGAGCAAGGGTTGACCGAGGTGAGGTaGGTTTATGCACCAAGATATGATAGGCGCGATAAA +
Preference number: 6 (lower is better)
Translates to: SHKTEQGLTEVR*VYAPRYDRRDK
Trigger: TTTATCGCGCCTATCATATCTTGGTGCATAAACGCACCTCACCTCGGTCAACCCTTGCTCCGTCTTATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CCA 72 bp GGGATATTTCTTAGCGCAAGTGCTATTTGCTGGATCTaGAATTTCTCTGCTACACCACTGAGGTCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: GIFLSASAICWI*NFSATPLRSEG
Trigger: GCCCTCAGACCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCTAAGAAATATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp CTGTCATCCACAGGACATATGTCACTCGGGGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGACTCTGTAGGGAATTTCACAGAGCT +
Preference number: 6 (lower is better)
Translates to: LSSTGHMSLGAAGCL*DVNFGRLCREFHRA
Trigger: AGCTCTGTGAAATTCCCTACAGAGTCTCCCAAAATTCACATCCAATAAACAGCCTGCAGCCCCGAGTGACATATGTCCTGTGGATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp CTGTCATCCACAGGACATATGTCACTCGGGGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGACTCTGTAGGGAATTTCTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: LSSTGHMSLGAAGCL*DVNFGRLCREFLKG
Trigger: TCCTTTCAGAAATTCCCTACAGAGTCTCCCAAAATTCACATCCAATAAACAGCCTGCAGCCCCGAGTGACATATGTCCTGTGGATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465396.1
CDS TCA 72 bp CTATTTGCTGGATCTGGAATTTCTCTGCTACACCACTaGGGTCTGAGGGCTGCTAGGAGAACAAACACCTTT +
Preference number: 6 (lower is better)
Translates to: LFAGSGISLLHH*GLRAARRTNTF
Trigger: AAAGGTGTTTGTTCTCCTAGCAGCCCTCAGACCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS GCA 72 bp TATGCACCAAGATATGATAGGCGCGATAAAATCGTGTaGTCAGCGTTCACAGCCATAGAGACGTGGCACTTT +
Preference number: 6 (lower is better)
Translates to: YAPRYDRRDKIV*SAFTAIETWHF
Trigger: AAAGTGCCACGTCTCTATGGCTGTGAACGCTGAGCACACGATTTTATCGCGCCTATCATATCTTGGTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CAA 72 bp GAAGAGGAGCTTCCAAGACTATTGACAGCAGTAACCTaGGCTGTGAAATTGGATTCAGGTGATTCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: EEELPRLLTAVT*AVKLDSGDSGV
Trigger: CACCCCTGAATCACCTGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp CAGTTTGCAGACAAACAAGGTTGTACCAAGGGGAAGACCTGTGACTaGAGAATTGAGGGAGTGGCCATGGTGAAAATTGATTCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: QFADKQGCTKGKTCD*RIEGVAMVKIDSSV
Trigger: GACAGAAGAATCAATTTTCACCATGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCCCCTTGGTACAACCTTGTTTGTCTGCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp CTGTCATCCACAGGACATATGTCACTCGGGGCTGCAGGCTGTTTATaGGATGTGAATTTTGGGAGACTCTGTAGGGAATTTCTGAAATCA +
Preference number: 6 (lower is better)
Translates to: LSSTGHMSLGAAGCL*DVNFGRLCREFLKS
Trigger: TGATTTCAGAAATTCCCTACAGAGTCTCCCAAAATTCACATCCAATAAACAGCCTGCAGCCCCGAGTGACATATGTCCTGTGGATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541374.6
ENST00000544434.5
CDS TCA 72 bp CATTATGTTAATACGAGTGGGCAGAGAACTGCCTTTTaGATTTGCTGCAGACACAGCCACAGCCCAATTTCC +
Preference number: 6 (lower is better)
Translates to: HYVNTSGQRTAF*ICCRHSHSPIS
Trigger: GGAAATTGGGCTGTGGCTGTGTCTGCAGCAAATTCAAAAGGCAGTTCTCTGCCCACTCGTATTAACATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 72 bp ATATGTCACTCGGGGCTGCAGGCTGTTTATTGGATGTaGATTTTGGGAGACTCTGTAGGGAATTTCACAGAG +
Preference number: 6 (lower is better)
Translates to: ICHSGLQAVYWM*ILGDSVGNFTE
Trigger: CTCTGTGAAATTCCCTACAGAGTCTCCCAAAATTCACATCCAATAAACAGCCTGCAGCCCCGAGTGACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000648487.1
ENST00000674203.2
CDS GCA 72 bp CTCTGCAATGGGATATTTCTTAGCGCAAGTGCTATTTaGTGGATCTGGAATTTCTCTGCTACACCACTGAGG +
Preference number: 6 (lower is better)
Translates to: LCNGIFLSASAI*WIWNFSATPLR
Trigger: CCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCTAAGAAATATCCCATTGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp TCCCTCATCTCTCCAATAAAGGGTACATCTGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTCCCACGGAGGAAGAGGCCTCACTAT +
Preference number: 6 (lower is better)
Translates to: SLISPIKGTSAHRSL*KFDSNVPRRKRPHY
Trigger: ATAGTGAGGCCTCTTCCTCCGTGGGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGCAGATGTACCCTTTATTGGAGAGATGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS TCA 72 bp CCCAGTAGGCTCTTCTTCTGGTGTTTGTGCTCTCAATaGTTCACTCCAATCACTCCAACTTCCCTTATAAAG +
Preference number: 6 (lower is better)
Translates to: PSRLFFWCLCSQ*FTPITPTSLIK
Trigger: CTTTATAAGGGAAGTTGGAGTGATTGGAGTGAATCATTGAGAGCACAAACACCAGAAGAAGAGCCTACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 72 bp CATCCTCTAAAAGTATGTGCCATCAACAATCAACTCTaGTATAGAACTCCGTATTCTTCCACGTGTCGCCTG +
Preference number: 6 (lower is better)
Translates to: HPLKVCAINNQL*YRTPYSSTCRL
Trigger: CAGGCGACACGTGGAAGAATACGGAGTTCTATACCAGAGTTGATTGTTGATGGCACATACTTTTAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262345.5
ENST00000544434.5
CDS CCA 72 bp TGCAATGGGATATTTCTTAGCGCAAGTGCTATTTGCTaGATCTGGAATTTCTCTGCTACACCACTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: CNGIFLSASAIC*IWNFSATPLRS
Trigger: AGACCTCAGTGGTGTAGCAGAGAAATTCCAGATCCAGCAAATAGCACTTGCGCTAAGAAATATCCCATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262345.5
ENST00000465396.1
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 72 bp TCTCCAATAAAGGGTACATCTGCTCACAGAAGCCTTTaGAAATTTGATTCTAATGTCCCACGGAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: SPIKGTSAHRSL*KFDSNVPRRKR
Trigger: CCTCTTCCTCCGTGGGACATTAGAATCAAATTTCAAAAGGCTTCTGTGAGCAGATGTACCCTTTATTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CAA 90 bp AAGAATGTGAATGTGGATGGAAGTGAAGAGGAGCTTCCAAGACTATaGACAGCAGTAACCTTGGCTGTGAAATTGGATTCAGGTGATTCA +
Preference number: 6 (lower is better)
Translates to: KNVNVDGSEEELPRL*TAVTLAVKLDSGDS
Trigger: TGAATCACCTGAATCCAATTTCACAGCCAAGGTTACTGCTGTCAATAGTCTTGGAAGCTCCTCTTCACTTCCATCCACATTCACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000441640.4
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 72 bp TTCTGTCAAACTTGTACAGGATTAACTTGTTACGTCTaGAATAGTGAAAGCAGCCTTGTCTGGGCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: FCQTCTGLTCYV*NSESSLVWASK
Trigger: CTTTGAAGCCCAGACAAGGCTGCTTTCACTATTCCAGACGTAACAAGTTAATCCTGTACAAGTTTGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262345.5
ENST00000371000.5
ENST00000541374.6
ENST00000544434.5
ENST00000648487.1
ENST00000674203.2
CDS CCA 72 bp CATCCTCTAAAAGTATGTGCCATCAACAATCAACTCTaGTATAGAACTCCGTATTCTTCAGAGATATGTTTT +
Preference number: 6 (lower is better)
Translates to: HPLKVCAINNQL*YRTPYSSEICF
Trigger: AAAACATATCTCTGAAGAATACGGAGTTCTATACCAGAGTTGATTGTTGATGGCACATACTTTTAGAGGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371000.5
ENST00000541374.6
ENST00000674203.2