RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL12RB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000096996

Ensembl transcript IDs: ENST00000322153.11, ENST00000430026.7, ENST00000593993.7, ENST00000594176.1, ENST00000597416.1, ENST00000598019.6, ENST00000600835.6

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCAGTaGTCCTGGGGGTGGATGCCCAGCCCAGGGTCCAGGGATCCATCT +
Preference number: 1 (lower is better)
Translates to: PAMLQGALESRLPIQ*SWGWMPSPGSRDPS
Trigger: AGATGGATCCCTGGACCCTGGGCTGGGCATCCACCCCCAGGAGCACTGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR CCA 90 bp ATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCAGTGCTCCTaGGGGTGGATGCCCAGCCCAGGGTCCAGGGATCCATCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: MLQGALESRLPIQCS*GWMPSPGSRDPSEP
Trigger: GGGCTCAGATGGATCCCTGGACCCTGGGCTGGGCATCCACCCCCAGGAGCACTGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR CCA 90 bp CCCCACGGATGCCAGGCCCAGCAGGGTGCAGCAGCTTCCATTTCATaGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCAC +
Preference number: 1 (lower is better)
Translates to: PHGCQAQQGAAASIS*QHLGFPRRMGGNRH
Trigger: GTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGCTGCACCCTGCTGGGCCTGGCATCCGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR CCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTaGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCACTGGAGCCT +
Preference number: 1 (lower is better)
Translates to: SFHFMAASRVPPQDG*QQARGREEAGALEP
Trigger: AGGCTCCAGTGCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR GCA 90 bp CCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATaGTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCAGTGCTCCT +
Preference number: 1 (lower is better)
Translates to: PFPICLDPPSYKTPQ*CREPLSPDSPSSAP
Trigger: AGGAGCACTGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR TCA 90 bp GTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATGTaGCTCCTGTGTGTGCTACGTAGCCTCGGGCGAGTCACTCACCCT +
Preference number: 1 (lower is better)
Translates to: VHWSLEELWVIWVQM*LLCVLRSLGRVTHP
Trigger: AGGGTGAGTGACTCGCCCGAGGCTACGTAGCACACACAGGAGTCACATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR GCA 90 bp TGGAGGAGCTCTGGGTTATTTGGGTCCAAATGTGACTCCTGTGTGTaGTACGTAGCCTCGGGCGAGTCACTCACCCTCTCTGAGCCTCAA +
Preference number: 1 (lower is better)
Translates to: WRSSGLFGSKCDSCV*YVASGESLTLSEPQ
Trigger: TTGAGGCTCAGAGAGGGTGAGTGACTCGCCCGAGGCTACGTAGCACACACAGGAGTCACATTTGGACCCAAATAACCCAGAGCTCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCTGCCCCACGGATaGCAGGCCCAGCAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: GSSKLQDPAMLQGALESRLLPHG*QAQQGA
Trigger: TGCACCCTGCTGGGCCTGGCATCCGTGGGGCAGGAG...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR GCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGCAGAGAGGAGGCAGGTaGACTGGAGCCTGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGQRGGR*TGAWRS
Trigger: GCTCCTCCAGGCTCCAGTGCACCTGCCTCCTCTCTG...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR GCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCACAGAGAGGAGGCAGGTaGACTGGAGCCTGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAQRGGR*TGAWRS
Trigger: GCTCCTCCAGGCTCCAGTGCACCTGCCTCCTCTCTG...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAGGAGGCAGGTGCACTaGAGCCTGGAGGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLRRQVH*SLEELW
Trigger: CCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCGCCAGAACAGGTAAATaGCAGGGTCTGCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: KLQDPAMLQGALESRLPIARTGK*QGLLLP
Trigger: GGGCAGGAGCAGACCCTGCCATTTACCTGTTCTGGC...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCCCGCAGGATGGGTaGCAACAGGCACGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDPPQDG*QQARGR
Trigger: TCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGG...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACTCCTGCCCCACGGATaGCAGGCCCAGCAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLLLPHG*QAQQGA
Trigger: TGCACCCTGCTGGGCCTGGCATCCGTGGGGCAGGAG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGCAGCTTCCATTTCATaGCAGCATCTAGGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: GSSKLQDPAMLQGALESRAASIS*QHLGFP
Trigger: GGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAGGTGCACTGGAGCCTaGAGGAGCTCTGGGTTATTT +
Preference number: 2 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLRCTGA*RSSGLF
Trigger: AAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGTAAATGGCAGGGTCTaGTCCTGCCCCACGGATGCC +
Preference number: 2 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLVNGRV*SCPTDA
Trigger: GGCATCCGTGGGGCAGGAGCAGACCCTGCCATTTAC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR TCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGATTTGGGTCCAAATGTaGCTCCTGTGTGTGCTACGT +
Preference number: 2 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLIWVQM*LLCVLR
Trigger: ACGTAGCACACACAGGAGTCACATTTGGACCCAAAT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGCCAGAACAGGTAAATaGCAGGGTCTGCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLARTGK*QGLLLP
Trigger: GGGCAGGAGCAGACCCTGCCATTTACCTGTTCTGGC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR TCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAGCTGCAGGGAGCCCTTaGGTCCAGACTCCCCATCCA +
Preference number: 2 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGAAGSP*VQTPHP
Trigger: TGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGC...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAAGGAGGCAGGTGCACTaGAGCCTGGAGGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSRRQVH*SLEELW
Trigger: CCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCT...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR TCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAATTTGGGTCCAAATGTaGCTCCTGTGTGTGCTACGT +
Preference number: 2 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLIWVQM*LLCVLR
Trigger: ACGTAGCACACACAGGAGTCACATTTGGACCCAAAT...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAAGGTGCACTGGAGCCTaGAGGAGCTCTGGGTTATTT +
Preference number: 2 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSRCTGA*RSSGLF
Trigger: AAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCT...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGCAGCTTCCATTTCATaGCAGCATCTAGGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSAASIS*QHLGFP
Trigger: GGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR GCA 72 bp CTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCAGTaGTCCTGGGGGTGGATGCCCAGCCCAGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: LQGALESRLPIQ*SWGWMPSPGSR
Trigger: CCTGGACCCTGGGCTGGGCATCCACCCCCAGGAGCACTGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR GCA 72 bp ATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATaGTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCC +
Preference number: 3 (lower is better)
Translates to: ICLDPPSYKTPQ*CREPLSPDSPS
Trigger: GGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR TCA 72 bp AGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATGTaGCTCCTGTGTGTGCTACGTAGCCTCGGGCGAGTC +
Preference number: 3 (lower is better)
Translates to: SLEELWVIWVQM*LLCVLRSLGRV
Trigger: GACTCGCCCGAGGCTACGTAGCACACACAGGAGTCACATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
3UTR TCA 72 bp GAAGGATCACTTGAGTCTGGGAGTTCAAGGCTGCAGTaGGCCATGATTGCACTCCAGTCTGCCAACAGACTG +
Preference number: 3 (lower is better)
Translates to: EGSLESGSSRLQ*AMIALQSANRL
Trigger: CAGTCTGTTGGCAGACTGGAGTGCAATCATGGCTCACTGCAGCCTTGAACTCCCAGACTCAAGTGATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322153.11
3UTR TCA 72 bp TTTATTGAGTACCAACTGCATGTGCCAAGCCAATGCTaGGAGCTTTACAGGCACCATTTCACTATGATATGG +
Preference number: 3 (lower is better)
Translates to: FIEYQLHVPSQC*ELYRHHFTMIW
Trigger: CCATATCATAGTGAAATGGTGCCTGTAAAGCTCTCAGCATTGGCTTGGCACATGCAGTTGGTACTCAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322153.11
CDS-3UTR GCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCGCCGGATCCGGGTCTTaGGGCGCAGTCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCAGSGS*GAVRLQ
Trigger: CTGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGC...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGAGCGGCGGGCACAGGTaGCGTGCGGCCCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQSGGHR*RAALFR
Trigger: CCTGAACAGGGCCGCACGGCACCTGTGCCCGCCGCT...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCCCAGGGGAGCCTCTCTaGCACCTGCGAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCPGEPL*HLRGSA
Trigger: GGCTGAACCTCGCAGGTGGCAGAGAGGCTCCCCTGG...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCGGTGCAGGGTCCTGGTaGCCTTGGCCTTACACGGGC +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCGAGSW*PWPYTG
Trigger: GCCCGTGTAAGGCCAAGGCCACCAGGACCCTGCACC...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCCCCCGCAGGATGGGTaGCAACAGGCACGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQPPQDG*QQARGR
Trigger: TCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCGCTGCAGGGAGCCCTTaGGTCCAGACTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCAAGSP*VQTPHP
Trigger: TGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGC...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCACCACCAGGGCCTCCTaGAGGGATGCCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCTTRAS*RDASSW
Trigger: CCAGGAAGAGGCATCCCTGCAGGAGGCCCTGGTGGT...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCCAACTTCCATGGGCTaGTGGGTGTCCGGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQPTSMG*WVSGAG
Trigger: TCCGGCACCGGACACCCAGCAGCCCATGGAAGTTGG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCCTTGGCTCCCCAGCTaGCGTCGTCGGAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQPWLPS*RRRSWN
Trigger: ATTCCAGCTCCGACGACGGCAGCTGGGGAGCCAAGG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCAGAGAGGAGGCAGGTaGACTGGAGCCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQQRGGR*TGAWRS
Trigger: GCTCCTCCAGGCTCCAGTGCACCTGCCTCCTCTCTG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCCTCCAGGGAACTCAATaGCGGAGCTGGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCLQGTQ*RSWHRV
Trigger: CACCCTGTGCCAGCTCCGCCATTGAGTTCCCTGGAG...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCACTCCATACGCAGCTaGCCGGCCAACTTGGACACC +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQHSIRS*PANLDT
Trigger: GGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCGGGGCTGCTCCACTTaGTCCAGGAACTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQRGCST*SRNFLG
Trigger: GCCAAGGAAGTTCCTGGAGCAAGTGGAGCAGCCCCG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGAGGCAGCGCCCTGCCTaGACAGCAGGAAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQRQRPA*TAGRGR
Trigger: TCTTCCTCTTCCTGCTGTCCAGGCAGGGCGCTGCCT...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGACAGACACCCCAGCCTaGTCGGAGAACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQTDTPA*SENCSL
Trigger: CAGGCTGCAGTTCTCCGACCAGGCTGGGGTGTCTGT...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGACTTCCATGGGCTGCTaGGTGTCCGGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQTSMGC*VSGAGT
Trigger: AGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGT...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCCCCTTGACAGCCTTCTaGAAGCTCCAGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCPLTAF*KLQLGW
Trigger: CCAACCCAGCTGGAGCTTCCAGAAGGCTGTCAAGGG...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCTGCAACCTCTGGAGCTaGCCTCCTAGAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCCNLWS*PPRNPN
Trigger: GTTGGGGTTTCTAGGAGGGCAGCTCCAGAGGTTGCA...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGCGGCGCAGTCAGGCTaGAGGTGGCAAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRAAQSG*RWQGPR
Trigger: ACGGGGGCCTTGCCACCTGCAGCCTGACTGCGCCGC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCGTGAGCTTCTCGGGGTaGGCAGAGGCAAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCVSFSG*AEAKMV
Trigger: TACCATCTTTGCCTCTGCGCACCCCGAGAAGCTCAC...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCAGCTGCTGAGGCATTaGCCCCAAAGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQQLLRH*PQSGRW
Trigger: CCACCTACCACTTTGGGGGCAATGCCTCAGCAGCTG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCTACAAGACCCCGCAATaGTGCAGGGAGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCYKTPQ*CREPLS
Trigger: ACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTA...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCCGGAGCTGGAATTCCTaGGCCACATTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCRSWNS*ATFISR
Trigger: CCTGGAGATGAATGTGGCCCAGGAATTCCAGCTCCG...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCGGACGCCGGGACAGGTaGTCAGCAGGGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIGRRDR*SAGMVP
Trigger: GGGCACCATCCCTGCTGAGCACCTGTCCCGGCGTCC...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACGGACGCCGGGACAGGTaGTCAGCAGGGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNGRRDR*SAGMVP
Trigger: GGGCACCATCCCTGCTGAGCACCTGTCCCGGCGTCC...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCGGGCACAGGTGCCGTaGGGCCCTGTTCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIRAQVP*GPVQAK
Trigger: CTTGGCCTGAACAGGGCCGCACGGCACCTGTGCCCG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATAGCGGCGGGCACAGGTaGCGTGCGGCCCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNSGGHR*RAALFR
Trigger: CCTGAACAGGGCCGCACGGCACCTGTGCCCGCCGCT...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCGGCAGGGTCTGCTCCTaGCCCACGGATGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSGRVCS*PTDARP
Trigger: GGGCCTGGCATCCGTGGGGCAGGAGCAGACCCTGCC...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATGGCAGGGTCTGCTCCTaGCCCACGGATGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNGRVCS*PTDARP
Trigger: GGGCCTGGCATCCGTGGGGCAGGAGCAGACCCTGCC...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATGCTCCTGGGGGTGGATaGCCAGCCCAGGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNAPGGG*PAQGPG
Trigger: CCCTGGACCCTGGGCTGGGCATCCACCCCCAGGAGC...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGGAGACTTCTCTGTCTaGTTCCTGGCCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQGDFSV*FLAQDS
Trigger: GGAATCCTGGGCCAGGAACCAGACAGAGAAGTCTCC...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGTCTGGAAGCTCCAGCTaGGTTGGCTGCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQSGSSS*VGCSFR
Trigger: CCTGAAAGAGCAGCCAACCCAGCTGGAGCTTCCAGA...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGGTGCAGGGTCCTGGTaGCCTTGGCCTTACACGGGC +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGGAGSW*PWPYTG
Trigger: GCCCGTGTAAGGCCAAGGCCACCAGGACCCTGCACC...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGCGCCTGCTGTGTGCCTaGCTCTGGAGAGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGRLLCA*LWRGSG
Trigger: TCCGCTGCCTCTCCAGAGCCAGGCACACAGCAGGCG...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS-3UTR CCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGAGCTGGCACAGGGTGTaGGCAGCGGCGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALESWHRV*AAAGTG
Trigger: ACCTGTGCCCGCCGCTGCCCACACCCTGTGCCAGCT...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGGCCCGAGGCCGAGCCTaGGTCTGCATCCGGATATGG +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEARGRA*VCIRIW
Trigger: CCATATCCGGATGCAGACTCAGGCTCGGCCTCGGGC...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATCTGCAGCCTGGTGGCTaGGCCGGCGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNLQPGG*AGGEVA
Trigger: TGCTACTTCGCCGCCGGCTCAGCCACCAGGCTGCAG...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACCAGGCGCCAGCCCTTaGCAGCCTTCTGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRPGASP*QPSGSS
Trigger: GGAGCTTCCAGAAGGCTGTCAAGGGCTGGCGCCTGG...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGCCTGCACTTCGATGCTaGAGCGCTGGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEPALRC*SAGAGS
Trigger: GGAGCCAGCCCCAGCGCTTCAGCATCGAAGTGCAGG...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACCCTGCACTTCGATGCTaGAGCGCTGGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNPALRC*SAGAGS
Trigger: GGAGCCAGCCCCAGCGCTTCAGCATCGAAGTGCAGG...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACCAGGGGAGCCTCTCTaGCACCTGCGAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRPGEPL*HLRGSA
Trigger: GGCTGAACCTCGCAGGTGGCAGAGAGGCTCCCCTGG...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCCGGATCCGGGTCTTaGGGCGCAGTCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQAGSGS*GAVRLQ
Trigger: CTGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGC...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGCTCCTGCCCCACGGATaGCAGGCCCAGCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQLLPHG*QAQQGA
Trigger: TGCACCCTGCTGGGCCTGGCATCCGTGGGGCAGGAG...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGAGAACTGCAGCCTGGTaGCTGAGCCGGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGRTAAW*LSRRRS
Trigger: ACTTCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCT...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCTCTGAGCCCGGGCTaGCCAATACATGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGALSPG*PIHGGP
Trigger: GGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGC...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGCTGCAGCCTGGTGGCTaGGCCGGCGGCGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLLQPGG*AGGEVA
Trigger: TGCTACTTCGCCGCCGGCTCAGCCACCAGGCTGCAG...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATCCAGGCGCCAGCCCTTaGCAGCCTTCTGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNPGASP*QPSGSS
Trigger: GGAGCTTCCAGAAGGCTGTCAAGGGCTGGCGCCTGG...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGCTGTAGTCGGTAAGTaGCCTCCGTGCCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRAVVGK*PPCQAP
Trigger: TGGCGCCTGGCACGGAGGTCACTTACCGACTACAGC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCGCTGCAGGGAGCCCTTaGGTCCAGACTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIAAGSP*VQTPHP
Trigger: TGGATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGC...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAAGCCTCTCTGCCACCTaGGAGGTTCAGCCACCCCGT +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRSLSAT*EVQPPR
Trigger: ACGGGGTGGCTGAACCTCGCAGGTGGCAGAGAGGCT...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATGCCTGGTCGGAGAACTaGAGCCTGGTGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNAWSEN*SLVAEP
Trigger: CGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGC...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGGTCCGGTGCCGGAACTaGACCTCAGCACCAACCTGG +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEVRCRN*TSAPTW
Trigger: CCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGAC...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGCTGCTGGGTGTCCGGTaGCGGAACTGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALELLGVR*RNCTSA
Trigger: TGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAG...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCTGCTGGGTGTCCGGTaGCGGAACTGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPILLGVR*RNCTSA
Trigger: TGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCGGAGCGCCTGCTGTGTaGCTGGCTCTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSGAPAV*LALERQ
Trigger: CTGCCTCTCCAGAGCCAGGCACACAGCAGGCGCTCC...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCAGAGAGGAGGCAGGTaGACTGGAGCCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIQRGGR*TGAWRS
Trigger: GCTCCTCCAGGCTCCAGTGCACCTGCCTCCTCTCTG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGCCAGGTGCAGGGTCCTaGTGGCCTTGGCCTTACACG +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEPGAGS*WPWPYT
Trigger: CGTGTAAGGCCAAGGCCACCAGGACCCTGCACCTGG...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACTCGATGCTGAAGCGCTaGGGCTGGCTCCAGACACCC +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNSMLKR*GWLQTP
Trigger: GGGTGTCTGGAGCCAGCCCCAGCGCTTCAGCATCGA...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAGCTGGCACAGGGTGTaGGCAGCGGCGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLSWHRV*AAAGTG
Trigger: ACCTGTGCCCGCCGCTGCCCACACCCTGTGCCAGCT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCAGGAGGCAGGTGCACTaGAGCCTGGAGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIRRQVH*SLEELW
Trigger: CCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCT...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCGCTGTAGTCGGTAAGTaGCCTCCGTGCCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSAVVGK*PPCQAP
Trigger: TGGCGCCTGGCACGGAGGTCACTTACCGACTACAGC...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGAGCACTCACTGGTTCTaGAGGCAGCGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQSTHWF*RQRPAW
Trigger: CCAGGCAGGGCGCTGCCTGCAGAACCAGTGAGTGCT...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGGCCTGGTCGGAGAACTaGAGCCTGGTGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLAWSEN*SLVAEP
Trigger: CGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGC...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGAACGCACACGGGGCTaGTCCACTTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRERTRG*STCSRN
Trigger: GTTCCTGGAGCAAGTGGAGCAGCCCCGTGTGCGTTC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCCATCCTGGCCCAGCTaGTCCACCGAGAATCTCACC +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIPSWPS*STENLT
Trigger: GGTGAGATTCTCGGTGGAGCAGCTGGGCCAGGATGG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTTCACCGAGACGTGGTaGGGTGTCCCAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEFTETW*GVPAAE
Trigger: CTCAGCAGCTGGGACACCGCACCACGTCTCGGTGAA...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACTGGGTCTCTGTGGGCTaGACGGGATGCTCTGACACC +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNWVSVG*TGCSDT
Trigger: GGTGTCAGAGCATCCCGTGCAGCCCACAGAGACCCA...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGACAGACACCCCAGCCTaGTCGGAGAACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALETDTPA*SENCSL
Trigger: CAGGCTGCAGTTCTCCGACCAGGCTGGGGTGTCTGT...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGACCTCAGCACCAACCTaGTTATCCGGGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGTSAPT*LSGVSH
Trigger: GTGGGAGACCCCGGATAACCAGGTTGGTGCTGAGGT...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGGGTCCTGGTGGCCTTaGCCTTACACGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQGSWWP*PYTGRT
Trigger: TGTCCTGCCCGTGTAAGGCCAAGGCCACCAGGACCC...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCGCTCTGAGCCCGGGCTaGCCAATACATGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSALSPG*PIHGGP
Trigger: GGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGC...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCAGGGAACTCAATaGCGGAGCTGGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRLQGTQ*RSWHRV
Trigger: CACCCTGTGCCAGCTCCGCCATTGAGTTCCCTGGAG...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGTCAGTATCATCATCCTaGGGTCCGCAGTCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGSVSSS*GPQSPN
Trigger: GTTGGGCGACTGCGGACCTCAGGATGATGATACTGA...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAGCCTCTCTGCCACCTaGGAGGTTCAGCCACCCCGT +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLSLSAT*EVQPPR
Trigger: ACGGGGTGGCTGAACCTCGCAGGTGGCAGAGAGGCT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGCACTCCATACGCAGCTaGCCGGCCAACTTGGACACC +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQHSIRS*PANLDT
Trigger: GGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTG...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGCCAACTTCCATGGGCTaGTGGGTGTCCGGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLPTSMG*WVSGAG
Trigger: TCCGGCACCGGACACCCAGCAGCCCATGGAAGTTGG...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACAATGCAATACGTCATaGTCTGAGCCCGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRQCNTS*SEPGLA
Trigger: GGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTG...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCGCTCAGCAGGGATGGTaGCCAGTCCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIAQQGW*PVHRHR
Trigger: TCTGTGTCTGTGGACTGGGCACCATCCCTGCTGAGC...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGGTGGGCTGCACGGGATaGTCTGACACCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEVGCTG*SDTCLL
Trigger: CAGCAAACAGGTGTCAGAGCATCCCGTGCAGCCCAC...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATTGGGTCTCTGTGGGCTaGACGGGATGCTCTGACACC +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNWVSVG*TGCSDT
Trigger: GGTGTCAGAGCATCCCGTGCAGCCCACAGAGACCCA...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAAGACCCCGCAATGCTaGAGGGAGCCCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNKTPQC*REPLSP
Trigger: TGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTT...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATCAACACCGCAGGAAGTaGCTGACCCCAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNQHRRK*LTPAVG
Trigger: TCCCACAGCTGGGGTCAGCCACTTCCTGCGGTGTTG...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAAGAACTGCAGCCTGGTaGCTGAGCCGGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPARTAAW*LSRRRS
Trigger: ACTTCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCT...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCCCTTGACAGCCTTCTaGAAGCTCCAGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIPLTAF*KLQLGW
Trigger: CCAACCCAGCTGGAGCTTCCAGAAGGCTGTCAAGGG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATCTGTGTGCCTGGCTCTaGAGAGGCAGCGGAGTGTTC +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNLCAWL*RGSGVF
Trigger: GAACACTCCGCTGCCTCTCCAGAGCCAGGCACACAG...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS-3UTR CCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACCTGGCCAATACATGGTaGTCCCGTTGGTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNLANTW*SRWFRR
Trigger: GCGTCGGAACCAACGGGACCACCATGTATTGGCCAG...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGATTCTTCACCGAGACGTaGTGCGGTGTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRFFTET*CGVPAA
Trigger: AGCAGCTGGGACACCGCACCACGTCTCGGTGAAGAA...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACCACTGAGGGTAACTTaGGTCTCTGTGGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRPLRVT*VSVGCT
Trigger: CGTGCAGCCCACAGAGACCCAAGTTACCCTCAGTGG...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGCCAGAACAGGTAAATaGCAGGGTCTGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRARTGK*QGLLLP
Trigger: GGGCAGGAGCAGACCCTGCCATTTACCTGTTCTGGC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGGYGGS*KQHSLV
Trigger: AACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCC...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCCAACTTGGACACCTTaGTGTCTCCCAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIPTWTP*CLPEEA
Trigger: AGCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATCAATACGTCATGCTCTaGGCCCGGGCTGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNQYVML*ARAGQY
Trigger: GTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTG...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGGAAGTCCACTGGGTTaGTCCACTGCCAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRGSPLG*STAKSP
Trigger: AGGAGACTTGGCAGTGGATCAACCCAGTGGACTTCC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGCGGGGCTGCTCCACTTaGTCCAGGAACTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLRGCST*SRNFLG
Trigger: GCCAAGGAAGTTCCTGGAGCAAGTGGAGCAGCCCCG...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGGAACGCACACGGGGCTaGTCCACTTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLERTRG*STCSRN
Trigger: GTTCCTGGAGCAAGTGGAGCAGCCCCGTGTGCGTTC...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATCAATGCAATACGTCATaGTCTGAGCCCGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNQCNTS*SEPGLA
Trigger: GGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTG...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGCAGCTGCTGAGGCATTaGCCCCAAAGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQQLLRH*PQSGRW
Trigger: CCACCTACCACTTTGGGGGCAATGCCTCAGCAGCTG...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCGTGGGCTGCACGGGATaGTCTGACACCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSVGCTG*SDTCLL
Trigger: CAGCAAACAGGTGTCAGAGCATCCCGTGCAGCCCAC...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGCCCCCTTCCCTATATaGCTGGATCCTCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRAPFPI*LDPPSY
Trigger: GTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGACTCGTAACGATCACTaGATATCCGATAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQTRNDH*ISDSIS
Trigger: TGAGATGCTATCGGATATCCAGTGATCGTTACGAGT...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAACTTCCATGGGCTGCTaGGTGTCCGGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPATSMGC*VSGAGT
Trigger: AGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGT...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCCACTGGTTCTGTGTaGGTGTCGGCAGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQATGSV*VSAGMC
Trigger: GCACATTCCTGCCGACACCCACACAGAACCAGTGGC...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCCTGGCCAATACATGGTaGTCCCGTTGGTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSLANTW*SRWFRR
Trigger: GCGTCGGAACCAACGGGACCACCATGTATTGGCCAG...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAGGTGCTCAGCAGGGATaGTGCCCAGTCCACAGACAC +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAGAQQG*CPVHRH
Trigger: GTGTCTGTGGACTGGGCACCATCCCTGCTGAGCACC...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGCTTCCATTTCATaGCAGCATCTAGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGAASIS*QHLGFP
Trigger: GGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACATTGGTTCGAGGAGATaGCAGCCACGTTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNIGSRR*QPRCRQ
Trigger: CTGCCTACAACGTGGCTGTCATCTCCTCGAACCAAT...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGGGAGGCGAAGAAGATaGGCCAATCAGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRGRRRR*ANQKPA
Trigger: TGCAGGTTTCTGATTGGCTCATCTTCTTCGCCTCCC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGTCACTCACCCTCTCTaGGCCTCAACGATCACATCT +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRVTHPL*ASTITS
Trigger: AGATGTGATCGTTGAGGCTCAGAGAGGGTGAGTGAC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGGTGTCGGCAGGAATGTaGCACGTCTGGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLVSAGM*HVWFRP
Trigger: TGGCCTGAACCAGACGTGGCACATTCCTGCCGACAC...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCTGGCCCACAGGCTaGCATTCAATGCAATACGTC +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALESWPTG*HSMQYV
Trigger: GACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGA...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCACTGGGTTGATCCACTaGCAAGTCTCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPITGLIH*QVSFPP
Trigger: TGGAGGGAAGGAGACTTGGCAGTGGATCAACCCAGT...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGATCACATCTTGGCCTTaGACCTGTCTCCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGITSWP*TCLHPP
Trigger: TGGAGGATGGAGACAGGTGCAAGGCCAAGATGTGAT...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAAGACCCCGCAATGCTaGAGGGAGCCCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLKTPQC*REPLSP
Trigger: TGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGAAAACAGCACTCACTaGTTCTGCAGGCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQENSTH*FCRQRP
Trigger: AGGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTC...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACGGAGAACTGCAGCCTaGTGGCTGAGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLRRTAA*WLSRRR
Trigger: TCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCTCCG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCCGGAGCTGGAATTCCTaGGCCACATTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSRSWNS*ATFISR
Trigger: CCTGGAGATGAATGTGGCCCAGGAATTCCAGCTCCG...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGAGGCCAGGACCAAATTaGTTCGAGGAGATGACAGCC +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALERPGPN*FEEMTA
Trigger: GGCTGTCATCTCCTCGAACCAATTTGGTCCTGGCCT...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAGGAATGTGCCACGTCTaGTTCAGGCCAGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRGMCHV*FRPGPN
Trigger: ATTTGGTCCTGGCCTGAACCAGACGTGGCACATTCC...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGGATATTCAGAGCCACTaGTTCTGTGTGGGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEDIQSH*FCVGVG
Trigger: GCCGACACCCACACAGAACCAGTGGCTCTGAATATC...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCACCACTGAGGGTAACTTaGGTCTCTGTGGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAPLRVT*VSVGCT
Trigger: CGTGCAGCCCACAGAGACCCAAGTTACCCTCAGTGG...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAAGGGATGCCTCTTCCTaGAAGTCCACTGGGTTGATC +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRRDASS*KSTGLI
Trigger: GATCAACCCAGTGGACTTCCAGGAAGAGGCATCCCT...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGTGCACTGGAGCCTaGAGGAGCTCTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNRCTGA*RSSGLF
Trigger: AAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCT...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACCCCCGCAGGATGGGTaGCAACAGGCACGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLPPQDG*QQARGR
Trigger: TCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCACAGAGTCCAAGCTATaGTTCTTCACCGAGACGTGG +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPITESKL*FFTETW
Trigger: CCACGTCTCGGTGAAGAATCATAGCTTGGACTCTGT...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGAACAGAGTCCAAGCTATaGTTCTTCACCGAGACGTGG +
Preference number: 4 (lower is better)
Translates to: GSSKLQDPAMLQGALESRTESKL*FFTETW
Trigger: CCACGTCTCGGTGAAGAATCATAGCTTGGACTCTGT...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACTGCAGGCAGCGCCCTaGCTGGACAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLLQAAP*LDSRKR
Trigger: CCTCTTCCTGCTGTCCAGGCAGGGCGCTGCCTGCAG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCTTGGCTCCCCAGCTaGCGTCGTCGGAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDPWLPS*RRRSWN
Trigger: ATTCCAGCTCCGACGACGGCAGCTGGGGAGCCAAGG...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGGTGAGCTTCTCGGGGTaGGCAGAGGCAAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLVSFSG*AEAKMV
Trigger: TACCATCTTTGCCTCTGCGCACCCCGAGAAGCTCAC...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAGGAGACTTCTCTGTCTaGTTCCTGGCCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAGDFSV*FLAQDS
Trigger: GGAATCCTGGGCCAGGAACCAGACAGAGAAGTCTCC...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAAGCTCCAGCTGGGTTaGCTGCTCTTTCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLKLQLG*LLFQGQ
Trigger: CTGACCCTGAAAGAGCAGCCAACCCAGCTGGAGCTT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGAGGCCAGGACCAAATTaGTTCGAGGAGATGACAGCC +
Preference number: 4 (lower is better)
Translates to: SFHFMAASRVPPQDGWQQRPGPN*FEEMTA
Trigger: GGCTGTCATCTCCTCGAACCAATTTGGTCCTGGCCT...CTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGTCAACGATCACATCTTaGCCTTGCACCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGSTITS*PCTCLH
Trigger: ATGGAGACAGGTGCAAGGCCAAGATGTGATCGTTGA...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCGCAGCTTCCATTTCATaGCAGCATCTAGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSAASIS*QHLGFP
Trigger: GGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATTGGTTCGAGGAGATaGCAGCCACGTTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAIGSRR*QPRCRQ
Trigger: CTGCCTACAACGTGGCTGTCATCTCCTCGAACCAAT...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCACGTTGGTTCCGACGCTaGTATTCAGAGCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPARWFRR*YSEPLV
Trigger: AACCAGTGGCTCTGAATATCAGCGTCGGAACCAACG...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAGTCACTCACCCTCTCTaGGCCTCAACGATCACATCT +
Preference number: 4 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAVTHPL*ASTITS
Trigger: AGATGTGATCGTTGAGGCTCAGAGAGGGTGAGTGAC...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCATTTGGGTCCAAATGTaGCTCCTGTGTGTGCTACGT +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIIWVQM*LLCVLR
Trigger: ACGTAGCACACACAGGAGTCACATTTGGACCCAAAT...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGATTTGGGTCCAAATGTaGCTCCTGTGTGTGCTACGT +
Preference number: 4 (lower is better)
Translates to: MPGSSKLQDPAMLQGALEIWVQM*LLCVLR
Trigger: ACGTAGCACACACAGGAGTCACATTTGGACCCAAAT...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAAGCACTCACTGGTTCTaGAGGCAGCGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLSTHWF*RQRPAW
Trigger: CCAGGCAGGGCGCTGCCTGCAGAACCAGTGAGTGCT...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACCAGGCTGCCATTCAATaGAATACGTCATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AASISWQHLGFPRRMGGNQAAIQ*NTSCSE
Trigger: CTCAGAGCATGACGTATTGCATTGAATGGCAGCCTG...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATATCACATCTTGGCCTTaGACCTGTCTCCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: EEAGALEPGGALGYLGPNITSWP*TCLHPP
Trigger: TGGAGGATGGAGACAGGTGCAAGGCCAAGATGTGAT...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAAGACTCCCCATCCAGTaGTCCTGGGGGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLRLPIQ*SWGWMP
Trigger: GGGCATCCACCCCCAGGAGCACTGGATGGGGAGTCT...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTTCCTGGAAGTCCACTaGGTTGATCCACTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSFLEVH*VDPLPS
Trigger: ACTTGGCAGTGGATCAACCCAGTGGACTTCCAGGAA...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCCAAGGCTCGTGTTTTaGGATTTTGAGCAGGACATT +
Preference number: 4 (lower is better)
Translates to: KLQDPAMLQGALESRLPIPRLVF*DFEQDI
Trigger: AATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACCATCCTGGCCCAGCTaGTCCACCGAGAATCTCACC +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLPSWPS*STENLT
Trigger: GGTGAGATTCTCGGTGGAGCAGCTGGGCCAGGATGG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGGCAGCGGAGTGTTCTaGAACCTCTGGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLGSGVF*NLWSCP
Trigger: AGGGCAGCTCCAGAGGTTGCAGAACACTCCGCTGCC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS-3UTR GCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGCGGCGCAGTCAGGCTaGAGGTGGCAAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSAAQSG*RWQGPR
Trigger: ACGGGGGCCTTGCCACCTGCAGCCTGACTGCGCCGC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGCTCCTGGGGGTGGATaGCCAGCCCAGGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSAPGGG*PAQGPG
Trigger: CCCTGGACCCTGGGCTGGGCATCCACCCCCAGGAGC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAACACCGCAGGAAGTaGCTGACCCCAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLQHRRK*LTPAVG
Trigger: TCCCACAGCTGGGGTCAGCCACTTCCTGCGGTGTTG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGTTCCTGGAAGTCCACTaGGTTGATCCACTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLFLEVH*VDPLPS
Trigger: ACTTGGCAGTGGATCAACCCAGTGGACTTCCAGGAA...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACGCCAGAACAGGTAAATaGCAGGGTCTGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDARTGK*QGLLLP
Trigger: GGGCAGGAGCAGACCCTGCCATTTACCTGTTCTGGC...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCCCTTCCCTATATGCCTaGATCCTCCAAGCTACAAGA +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSPSLYA*ILQATR
Trigger: TCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGG...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCCCAAGGCTCGTGTTTTaGGATTTTGAGCAGGACATT +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSPRLVF*DFEQDI
Trigger: AATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGG...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGCTCAGCAGGGATGGTaGCCAGTCCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLAQQGW*PVHRHR
Trigger: TCTGTGTCTGTGGACTGGGCACCATCCCTGCTGAGC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCACGGGCACAGGTGCCGTaGGGCCCTGTTCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSRAQVP*GPVQAK
Trigger: CTTGGCCTGAACAGGGCCGCACGGCACCTGTGCCCG...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCACTCCTGCCCCACGGATaGCAGGCCCAGCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSLLPHG*QAQQGA
Trigger: TGCACCCTGCTGGGCCTGGCATCCGTGGGGCAGGAG...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCACGGAGAACTGCAGCCTaGTGGCTGAGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSRRTAA*WLSRRR
Trigger: TCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCTCCG...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGGGCTGGCCAATACATaGTGGTCCCGTTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLGLANT*WSRWFR
Trigger: TCGGAACCAACGGGACCACCATGTATTGGCCAGCCC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTATTCTTCACCGAGACGTaGTGCGGTGTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLFFTET*CGVPAA
Trigger: AGCAGCTGGGACACCGCACCACGTCTCGGTGAAGAA...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGCCTTCCCTATATGCCTaGATCCTCCAAGCTACAAGA +
Preference number: 4 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLPSLYA*ILQATR
Trigger: TCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGG...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGCCCGAGGCCGAGCCTaGGTCTGCATCCGGATATGG +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSARGRA*VCIRIW
Trigger: CCATATCCGGATGCAGACTCAGGCTCGGCCTCGGGC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAACCGCAGGAAGTGGCTaGCCCCAGCTGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSTAGSG*PQLWDP
Trigger: AGGGTCCCACAGCTGGGGTCAGCCACTTCCTGCGGT...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGGAAGTCCACTGGGTTaGTCCACTGCCAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLGSPLG*STAKSP
Trigger: AGGAGACTTGGCAGTGGATCAACCCAGTGGACTTCC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACGCTCTGACACCTGTTTaGTGTCTTCATCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDALTPV*CLHLGS
Trigger: GCTGCCGAGATGAAGACAGCAAACAGGTGTCAGAGC...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGACGCCCACGAGAAGGATaGTCAGGAAGCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGRPREG*SGSSPG
Trigger: CCCTGGGGAGCTTCCTGAGCATCCTTCTCGTGGGCG...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAACCACCAGGGCCTCCTaGAGGGATGCCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGTTRAS*RDASSW
Trigger: CCAGGAAGAGGCATCCCTGCAGGAGGCCCTGGTGGT...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTATACAAGACCCCGCAATaGTGCAGGGAGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLYKTPQ*CREPLS
Trigger: ACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTA...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGCCCCCTTCCCTATATaGCTGGATCCTCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLAPFPI*LDPPSY
Trigger: GTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCACTCGTAACGATCACTaGATATCCGATAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSTRNDH*ISDSIS
Trigger: TGAGATGCTATCGGATATCCAGTGATCGTTACGAGT...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLGYGGS*KQHSLV
Trigger: AACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGTCCGGTGCCGGAACTaGACCTCAGCACCAACCTGG +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSVRCRN*TSAPTW
Trigger: CCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGAC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAAGACTCCCCATCCAGTaGTCCTGGGGGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSRLPIQ*SWGWMP
Trigger: GGGCATCCACCCCCAGGAGCACTGGATGGGGAGTCT...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAAGGCAGCGCCCTGCCTaGACAGCAGGAAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGRQRPA*TAGRGR
Trigger: TCTTCCTCTTCCTGCTGTCCAGGCAGGGCGCTGCCT...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGGGTCCTGGTGGCCTTaGCCTTACACGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSGSWWP*PYTGRT
Trigger: TGTCCTGCCCGTGTAAGGCCAAGGCCACCAGGACCC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCACCAGGTGCAGGGTCCTaGTGGCCTTGGCCTTACACG +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSPGAGS*WPWPYT
Trigger: CGTGTAAGGCCAAGGCCACCAGGACCCTGCACCTGG...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATCGATGCTGAAGCGCTaGGGCTGGCTCCAGACACCC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSSMLKR*GWLQTP
Trigger: GGGTGTCTGGAGCCAGCCCCAGCGCTTCAGCATCGA...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGTAAATGGCAGGGTCTaGTCCTGCCCCACGGATGCC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSVNGRV*SCPTDA
Trigger: GGCATCCGTGGGGCAGGAGCAGACCCTGCCATTTAC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGTAAATGGCAGGGTCTaGTCCTGCCCCACGGATGCC +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSVNGRV*SCPTDA
Trigger: GGCATCCGTGGGGCAGGAGCAGACCCTGCCATTTAC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGATGCCGTCGTCGGAGCTaGAATTCCTGGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGCRRRS*NSWATF
Trigger: GAATGTGGCCCAGGAATTCCAGCTCCGACGACGGCA...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGGTGCTCAGCAGGGATaGTGCCCAGTCCACAGACAC +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSGAQQG*CPVHRH
Trigger: GTGTCTGTGGACTGGGCACCATCCCTGCTGAGCACC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCACAATACGTCATGCTCTaGGCCCGGGCTGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSQYVML*ARAGQY
Trigger: GTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTG...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGTGTCGGCAGGAATGTaGCACGTCTGGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSVSAGM*HVWFRP
Trigger: TGGCCTGAACCAGACGTGGCACATTCCTGCCGACAC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAGGCTGCCATTCAATaGAATACGTCATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLQAAIQ*NTSCSE
Trigger: CTCAGAGCATGACGTATTGCATTGAATGGCAGCCTG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAGAAAACAGCACTCACTaGTTCTGCAGGCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGENSTH*FCRQRP
Trigger: AGGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTC...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAACCTCAGCACCAACCTaGTTATCCGGGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSTSAPT*LSGVSH
Trigger: GTGGGAGACCCCGGATAACCAGGTTGGTGCTGAGGT...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCATGCCGTCGTCGGAGCTaGAATTCCTGGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSCRRRS*NSWATF
Trigger: GAATGTGGCCCAGGAATTCCAGCTCCGACGACGGCA...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGATCTGGAAGCTCCAGCTaGGTTGGCTGCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGSGSSS*VGCSFR
Trigger: CCTGAAAGAGCAGCCAACCCAGCTGGAGCTTCCAGA...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGCCACTGGTTCTGTGTaGGTGTCGGCAGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSATGSV*VSAGMC
Trigger: GCACATTCCTGCCGACACCCACACAGAACCAGTGGC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGGGCTGGCCAATACATaGTGGTCCCGTTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSGLANT*WSRWFR
Trigger: TCGGAACCAACGGGACCACCATGTATTGGCCAGCCC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCACCAACTTGGACACCTTaGTGTCTCCCAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSPTWTP*CLPEEA
Trigger: AGCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGG...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATCAGTATCATCATCCTaGGGTCCGCAGTCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSSVSSS*GPQSPN
Trigger: GTTGGGCGACTGCGGACCTCAGGATGATGATACTGA...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAGGGAGGCGAAGAAGATaGGCCAATCAGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGGRRRR*ANQKPA
Trigger: TGCAGGTTTCTGATTGGCTCATCTTCTTCGCCTCCC...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAACTGGGTTGATCCACTaGCAAGTCTCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGTGLIH*QVSFPP
Trigger: TGGAGGGAAGGAGACTTGGCAGTGGATCAACCCAGT...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAAAGCTCCAGCTGGGTTaGCTGCTCTTTCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSKLQLG*LLFQGQ
Trigger: CTGACCCTGAAAGAGCAGCCAACCCAGCTGGAGCTT...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACGTGTTTTGAGATTTTaGGCAGGACATTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLRVLRF*AGHSSF
Trigger: GAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACG...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR GCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCATCCTGGCCCACAGGCTaGCATTCAATGCAATACGTC +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSSWPTG*HSMQYV
Trigger: GACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGA...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGTCTGCATCCGGATATaGCGGGTCCTGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSVCIRI*RVLKTA
Trigger: TGCTGTTTTCAGGACCCGCCATATCCGGATGCAGAC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGGAATGTGCCACGTCTaGTTCAGGCCAGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSGMCHV*FRPGPN
Trigger: ATTTGGTCCTGGCCTGAACCAGACGTGGCACATTCC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAGATATTCAGAGCCACTaGTTCTGTGTGGGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSDIQSH*FCVGVG
Trigger: GCCGACACCCACACAGAACCAGTGGCTCTGAATATC...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCAAGGGATGCCTCTTCCTaGAAGTCCACTGGGTTGATC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSRDASS*KSTGLI
Trigger: GATCAACCCAGTGGACTTCCAGGAAGAGGCATCCCT...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAAGGTGCACTGGAGCCTaGAGGAGCTCTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSRCTGA*RSSGLF
Trigger: AAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCT...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CCA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGATCAACGATCACATCTTaGCCTTGCACCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGSTITS*PCTCLH
Trigger: ATGGAGACAGGTGCAAGGCCAAGATGTGATCGTTGA...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR TCA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCACGTGTTTTGAGATTTTaGGCAGGACATTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSRVLRF*AGHSSF
Trigger: GAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACG...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 90 bp GGGACTCCCAAGACCACAGGCAGGGCTGGGTCTTTGGCCTGGTGGTaGAGGCCATGGGAGGGGCCGCTGTGGATGGGGTCAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GTPKTTGRAGSLAWW*RPWEGPLWMGSGRA
Trigger: GGCTCTGCCTGACCCCATCCACAGCGGCCCCTCCCATGGCCTCCACCACCAGGCCAAAGACCCAGCCCTGCCTGTGGTCTTGGGAGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS GCA 90 bp GAAGCGCTGGGGCTGGCTCCAGACACCCCTCAGCCACGCTGTGTCTaGTCGCACCTGCACCGTGTAGGCTACACCAGCCCGCAGGCCACT +
Preference number: 5 (lower is better)
Translates to: EALGLAPDTPQPRCV*SHLHRVGYTSPQAT
Trigger: AGTGGCCTGCGGGCTGGTGTAGCCTACACGGTGCAGGTGCGAGCAGACACAGCGTGGCTGAGGGGTGTCTGGAGCCAGCCCCAGCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp CAGCACAGACACCCCAGCCTGGTCGGAGAACTGCAGCCTGGTGGCTaGGCCGGCGGCGAAGTAGCAGCAGCGCCCGGAGCTAAGGCAACA +
Preference number: 5 (lower is better)
Translates to: QHRHPSLVGELQPGG*AGGEVAAAPGAKAT
Trigger: TGTTGCCTTAGCTCCGGGCGCTGCTGCTACTTCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGCTGGGGTGTCTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322153.11
ENST00000430026.7
ENST00000593993.7
ENST00000600835.6
CDS GCA 90 bp AGGTTGCCATTCCAGCCGGATCCGGGTCTTGCGGCGCAGTCAGGCTaGAGGTGGCAAGGCCCCCGTCCTGGCCCACAGGCTGCCATTCAA +
Preference number: 5 (lower is better)
Translates to: RLPFQPDPGLAAQSG*RWQGPRPGPQAAIQ
Trigger: TTGAATGGCAGCCTGTGGGCCAGGACGGGGGCCTTGCCACCTGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGCTGGAATGGCAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 90 bp GGGCTGCTGGGTGTCCGGTGCCGGAACTGCACCTCAGCACCAACCTaGTTATCCGGGGTCTCCCACTCCATACGCAGCTGCCCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GLLGVRCRNCTSAPT*LSGVSHSIRSCPAN
Trigger: GTTGGCCGGGCAGCTGCGTATGGAGTGGGAGACCCCGGATAACCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp GGGCCCGAGGCCGAGCCTGAGTCTGCATCCGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTTCTGCAGGCAGCGCCCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GPEAEPESASGYGGS*KQHSLVLQAAPCLD
Trigger: GTCCAGGCAGGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAGGCTCGGCCTCGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000594176.1
ENST00000598019.6
ENST00000600835.6
CDS-3UTR CAA 90 bp GGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGTGCGATCACATCTTGGCCTaGCACCTGTCTCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: GSPAGWVATGTGQRGGRCDHILA*HLSPSS
Trigger: GGAGGATGGAGACAGGTGCAAGGCCAAGATGTGATC...GCACCTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 90 bp TCGGTAAGTGACCTCCGTGCCAGGCGCCAGCCCTTGACAGCCTTCTaGAAGCTCCAGCTGGGTTGGCTGCTCTTTCAGGGTCAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: SVSDLRARRQPLTAF*KLQLGWLLFQGQPP
Trigger: AGGCGGCTGACCCTGAAAGAGCAGCCAACCCAGCTGGAGCTTCCAGAAGGCTGTCAAGGGCTGGCGCCTGGCACGGAGGTCACTTACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCCAGGCGCCAGCCCTaGACAGCCTTCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGARRQP*TAFWKL
Trigger: GAGCTTCCAGAAGGCTGTCAAGGGCTGGCGCCTGGC...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGAGGGTCCTGGTGGCCTaGGCCTTACACGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGRVLVA*ALHGQD
Trigger: GTCCTGCCCGTGTAAGGCCAAGGCCACCAGGACCCT...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGCCGGATCCGGGTCTaGCGGCGCAGTCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: AASISWQHLGFPRRMGGNSRIRV*RRSQAA
Trigger: TGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGCT...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGGATCACATCTTGGCCTaGCACCTGTCTCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQDHILA*HLSPSS
Trigger: GGAGGATGGAGACAGGTGCAAGGCCAAGATGTGATC...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 90 bp CAGTCGCCCAACTTCCATGGGCTGCTGGGTGTCCGGTGCCGGAACTaGACCTCAGCACCAACCTGGTTATCCGGGGTCTCCCACTCCATA +
Preference number: 5 (lower is better)
Translates to: QSPNFHGLLGVRCRN*TSAPTWLSGVSHSI
Trigger: TATGGAGTGGGAGACCCCGGATAACCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGTTGGGCGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 90 bp GCCTGGCTCTGGAGAGGCAGCGGAGTGTTCTGCAACCTCTGGAGCTaGCCTCCTAGAAACCCCAACCTGTTGGGGGAGGTAGACGCCAGA +
Preference number: 5 (lower is better)
Translates to: AWLWRGSGVFCNLWS*PPRNPNLLGEVDAR
Trigger: TCTGGCGTCTACCTCCCCCAACAGGTTGGGGTTTCTAGGAGGGCAGCTCCAGAGGTTGCAGAACACTCCGCTGCCTCTCCAGAGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594176.1
ENST00000600835.6
CDS GCA 90 bp GGCCCCCGTCCTGGCCCACAGGCTGCCATTCAATGCAATACGTCATaGTCTGAGCCCGGGCTGGCCAATACATGGTGGTCCCGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GPRPGPQAAIQCNTS*SEPGLANTWWSRWF
Trigger: GAACCAACGGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGACGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 90 bp TGCAGGTGGCAAGGCCCCCGTCCTGGCCCACAGGCTGCCATTCAATaGAATACGTCATGCTCTGAGCCCGGGCTGGCCAATACATGGTGG +
Preference number: 5 (lower is better)
Translates to: CRWQGPRPGPQAAIQ*NTSCSEPGLANTWW
Trigger: CCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGACGGGGGCCTTGCCACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 90 bp GCTGGGTCTTTGGCCTGGTGGTGGAGGCCATGGGAGGGGCCGCTGTaGATGGGGTCAGGCAGAGCCCTACATAATCCTCAGCCAACAATG +
Preference number: 5 (lower is better)
Translates to: AGSLAWWWRPWEGPL*MGSGRALHNPQPTM
Trigger: CATTGTTGGCTGAGGATTATGTAGGGCTCTGCCTGACCCCATCCACAGCGGCCCCTCCCATGGCCTCCACCACCAGGCCAAAGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS-3UTR CAA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCGCTCCAGGAACTTCCTaGGCTCCCCAGCTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: KLQDPAMLQGALESRLPIAPGTS*APQLPS
Trigger: CGACGGCAGCTGGGGAGCCAAGGAAGTTCCTGGAGC...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp ATGCCTGGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGAGGGTCCTGGTGGCCTaGGCCTTACACGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: MPGSSKLQDPAMLQGALERVLVA*ALHGQD
Trigger: GTCCTGCCCGTGTAAGGCCAAGGCCACCAGGACCCT...CTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGGCAGAGAGGAGGCAGCTCAACGATCACATCTaGGCCTTGCACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LGFPRRMGGNRHGAERRQLNDHI*ALHLSP
Trigger: TGGAGACAGGTGCAAGGCCAAGATGTGATCGTTGAG...CTGCCTCCTCTCTGCCCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp AGGAACTGCCCCGAACCTGAGTCTGCATCCGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTTCTGCAGGCAGCGCCCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RNCPEPESASGYGGS*KQHSLVLQAAPCLD
Trigger: GTCCAGGCAGGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAGGTTCGGGGCAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS TCA 90 bp CCGTCCTGGCCCACAGGCTGCCATTCAATGCAATACGTCATGCTCTaGGCCCGGGCTGGCCAATACATGGTGGTCCCGTTGGTTCCGACG +
Preference number: 5 (lower is better)
Translates to: PSWPTGCHSMQYVML*ARAGQYMVVPLVPT
Trigger: CGTCGGAACCAACGGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 90 bp AGTGGCCTCTGCCTGGCAGCTGCCAACGAACATTTATGGAGCGCCTaGTGTGTGCCTGGCTCTGGAGAGGCAGCGGAGTGTTCTGCAACC +
Preference number: 5 (lower is better)
Translates to: SGLCLAAANEHLWSA*CVPGSGEAAECSAT
Trigger: GGTTGCAGAACACTCCGCTGCCTCTCCAGAGCCAGGCACACAGCAGGCGCTCCATAAATGTTCGTTGGCAGCTGCCAGGCAGAGGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594176.1
CDS CCA 90 bp CTGTGTGCCTGGCTCTGGAGAGGCAGCGGAGTGTTCTGCAACCTCTaGAGCTGCCCTCCTAGAAACCCCAACCTGTTGGGGGAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: LCAWLWRGSGVFCNL*SCPPRNPNLLGEVD
Trigger: GTCTACCTCCCCCAACAGGTTGGGGTTTCTAGGAGGGCAGCTCCAGAGGTTGCAGAACACTCCGCTGCCTCTCCAGAGCCAGGCACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594176.1
ENST00000600835.6
CDS-3UTR CAA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGAGCCGGATCCGGGTCTaGCGGCGCAGTCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLSRIRV*RRSQAA
Trigger: TGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGCT...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp GAGCCTGGAAGAGATCCTGAGTCTGCATCCGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTTCTGCAGGCAGCGCCCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: EPGRDPESASGYGGS*KQHSLVLQAAPCLD
Trigger: GTCCAGGCAGGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAGGATCTCTTCCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430026.7
CDS TCA 90 bp CCTGTTGGGGGAGGTAGACGCCAGAGCAGCGGTGACCCCACGGAGTaGTCAGTTGTGATAAGGGACTCACAGCAAGTGAAGGAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: PVGGGRRQSSGDPTE*SVVIRDSQQVKEAP
Trigger: AGGCGCCTCCTTCACTTGCTGTGAGTCCCTTATCACAACTGATCACTCCGTGGGGTCACCGCTGCTCTGGCGTCTACCTCCCCCAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS GCA 90 bp TCAGCACCAACCTGGTTATCCGGGGTCTCCCACTCCATACGCAGCTaGCCGGCCAACTTGGACACCTTGATGTCTCCCAGAGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SAPTWLSGVSHSIRS*PANLDTLMSPRGGS
Trigger: TGAGCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTGGGAGACCCCGGATAACCAGGTTGGTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 90 bp CATCTCGGCAGCGGACAACATACTCCTTTAGGACGCCGGGACAGGTaGTCAGCAGGGATGGTGCCCAGTCCACAGACACAGAGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: HLGSGQHTPLGRRDR*SAGMVPSPQTQSPS
Trigger: GCTTGGACTCTGTGTCTGTGGACTGGGCACCATCCCTGCTGAGCACCTGTCCCGGCGTCCTAAAGGAGTATGTTGTCCGCTGCCGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 90 bp GAACTTCCTTGGCTCCCCAGCTGCCGTCGTCGGAGCTGGAATTCCTaGGCCACATTCATCTCCAGGGGGCAGAGGCAGGACTCAGTATCA +
Preference number: 5 (lower is better)
Translates to: ELPWLPSCRRRSWNS*ATFISRGQRQDSVS
Trigger: TGATACTGAGTCCTGCCTCTGCCCCCTGGAGATGAATGTGGCCCAGGAATTCCAGCTCCGACGACGGCAGCTGGGGAGCCAAGGAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp CTCAGCAGGGATGGTGCCCAGTCCACAGACACAGAGTCCAAGCTATaGTTCTTCACCGAGACGTGGTGCGGTGTCCCAGCTGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LSRDGAQSTDTESKL*FFTETWCGVPAAEA
Trigger: TGCCTCAGCAGCTGGGACACCGCACCACGTCTCGGTGAAGAATCATAGCTTGGACTCTGTGTCTGTGGACTGGGCACCATCCCTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCGCCAACTTGGACACCTaGATGTCTCCCAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: KLQDPAMLQGALESRLPIANLDT*MSPRGG
Trigger: GCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGGC...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCAGCTGCCCGGCCAACTaGGACACCTTGATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSSCPAN*DTLMSP
Trigger: GGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCT...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp ATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACAGGCACGGGCAGGCCAGGACCAAATaGGTTCGAGGAGATGACAGC +
Preference number: 5 (lower is better)
Translates to: ISWQHLGFPRRMGGNRHGQARTK*VRGDDS
Trigger: GCTGTCATCTCCTCGAACCAATTTGGTCCTGGCCTG...CCCGTGCCTGTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp CTCCTGTGTGTGCTACGTAGCCTCGGGCGAGTCACTCACCCTCTCTaGGCCTCAACGATCACATCTTGGCCTTGCACCTGTCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: LLCVLRSLGRVTHPL*ASTITSWPCTCLHP
Trigger: AGGATGGAGACAGGTGCAAGGCCAAGATGTGATCGTTGAGGCTCAGAGAGGGTGAGTGACTCGCCCGAGGCTACGTAGCACACACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAAGCTGCCCGGCCAACTaGGACACCTTGATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPASCPAN*DTLMSP
Trigger: GGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCT...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp GAGGAGGCAGGTGCACTGGAGCCTGGAGGAGCTCTGGGTTATTTGGGTCCAAATGAAGCTCCAGCTGGGTaGGCTGCTCTTTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: EEAGALEPGGALGYLGPNEAPAG*AALSGS
Trigger: TGACCCTGAAAGAGCAGCCAACCCAGCTGGAGCTTC...ATTTGGACCCAAATAACCCAGAGCTCCTCCAGGCTCCAGTGCACCTGCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCAGGCCAGGACCAAATaGGTTCGAGGAGATGACAGC +
Preference number: 5 (lower is better)
Translates to: KLQDPAMLQGALESRLPIQARTK*VRGDDS
Trigger: GCTGTCATCTCCTCGAACCAATTTGGTCCTGGCCTG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp GTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACCCCGCAGCCACTGAGGGTAACTaGGGTCTCTGTGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: VYSPLPYMPGSSKLQDPAATEGN*GLCGLH
Trigger: GTGCAGCCCACAGAGACCCAAGTTACCCTCAGTGGC...TGCGGGGTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp GGATCCTCCAAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGATGGAAGTCCACTGGGTaGATCCACTGCCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GSSKLQDPAMLQGALESRWKSTG*IHCQVS
Trigger: GGAGACTTGGCAGTGGATCAACCCAGTGGACTTCCA...TCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTTGGAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp TGTGCCACGTCTGGTTCAGGCCAGGACCAAATTGGTTCGAGGAGATaGCAGCCACGTTGTAGGCAGCACCCGAGAGATAGGGCATCTTCC +
Preference number: 5 (lower is better)
Translates to: CATSGSGQDQIGSRR*QPRCRQHPRDRASS
Trigger: GGAAGATGCCCTATCTCTCGGGTGCTGCCTACAACGTGGCTGTCATCTCCTCGAACCAATTTGGTCCTGGCCTGAACCAGACGTGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp TGTGGATGGGGTCAGGCAGAGCCCTACATAATCCTCAGCCAACAATaGGGAACTGCCCCGAACCTGAGTCTGCATCCGGATATGGCGGGT +
Preference number: 5 (lower is better)
Translates to: CGWGQAEPYIILSQQ*GTAPNLSLHPDMAG
Trigger: ACCCGCCATATCCGGATGCAGACTCAGGTTCGGGGCAGTTCCTCATTGTTGGCTGAGGATTATGTAGGGCTCTGCCTGACCCCATCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS CCA 90 bp GAGATCATGCCATCTGTGTGGGTGTCGGCAGGAATGTGCCACGTCTaGTTCAGGCCAGGACCAAATTGGTTCGAGGAGATGACAGCCACG +
Preference number: 5 (lower is better)
Translates to: EIMPSVWVSAGMCHV*FRPGPNWFEEMTAT
Trigger: CGTGGCTGTCATCTCCTCGAACCAATTTGGTCCTGGCCTGAACCAGACGTGGCACATTCCTGCCGACACCCACACAGATGGCATGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322153.11
CDS-3UTR CAA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGGCCAACTTGGACACCTaGATGTCTCCCAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLANLDT*MSPRGG
Trigger: GCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGGC...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGGAAGCTCCAGCTGGGTaGGCTGCTCTTTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLEAPAG*AALSGS
Trigger: TGACCCTGAAAGAGCAGCCAACCCAGCTGGAGCTTC...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCTACATGGTGGTCCCGTaGGTTCCGACGCTGATATTC +
Preference number: 5 (lower is better)
Translates to: KLQDPAMLQGALESRLPIYMVVP*VPTLIF
Trigger: GAATATCAGCGTCGGAACCAACGGGACCACCATGTA...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp AAGCTACAAGACCCCGCAATGCTGCAGGGAGCCCTTGAGTCCAGACTCCCCATCCTCAACGATCACATCTaGGCCTTGCACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KLQDPAMLQGALESRLPILNDHI*ALHLSP
Trigger: TGGAGACAGGTGCAAGGCCAAGATGTGATCGTTGAG...GATGGGGAGTCTGGACTCAAGGGCTCCCTGCAGCATTGCGGGGTCTTGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 90 bp CACAGGCTGCCATTCAATGCAATACGTCATGCTCTGAGCCCGGGCTaGCCAATACATGGTGGTCCCGTTGGTTCCGACGCTGATATTCAG +
Preference number: 5 (lower is better)
Translates to: HRLPFNAIRHALSPG*PIHGGPVGSDADIQ
Trigger: CTGAATATCAGCGTCGGAACCAACGGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp TTTTCCCACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTAGCCAGGCGCCAGCCCTaGACAGCCTTCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: FSHKVYSPLPYMPGSSKLARRQP*TAFWKL
Trigger: GAGCTTCCAGAAGGCTGTCAAGGGCTGGCGCCTGGC...TAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTGGGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CCCCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGCTCTGACACCTGTTaGCTGTCTTCATCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: PPFPVHSTPEQVNGRVCSCSDTC*LSSSRQ
Trigger: CTGCCGAGATGAAGACAGCAAACAGGTGTCAGAGCA...GGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 90 bp TTCTCCCATGTACCGACCAATCTGAACGGACACAGACACCAGCCCTaGGACCATGCTAGGGAAGTGATAATGTTCAGAGAGGCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: FSHVPTNLNGHRHQP*DHAREVIMFREAAG
Trigger: GCCAGCCGCCTCTCTGAACATTATCACTTCCCTAGCATGGTCTCAGGGCTGGTGTCTGTGTCCGTTCAGATTGGTCGGTACATGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS GCA 90 bp CGCAGAGGCAAAGATGGTAATGTAGTAACACTTTTCCTGCCCCATTaGCCCAGACTCTCGACTCCAGCTGTAGGTTGCCATTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RRGKDGNVVTLFLPH*PRLSTPAVGCHSSR
Trigger: CCGGCTGGAATGGCAACCTACAGCTGGAGTCGAGAGTCTGGGGCAATGGGGCAGGAAAAGTGTTACTACATTACCATCTTTGCCTCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp TTCCAAGGCTCGTGTTTTGAGATTTTGAGCAGGACATTCAAGCTTCAAACAGGAGCTCCAGGAACTTCCTaGGCTCCCCAGCTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: FQGSCFEILSRTFKLQTGAPGTS*APQLPS
Trigger: CGACGGCAGCTGGGGAGCCAAGGAAGTTCCTGGAGC...TCCTGTTTGAAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGAGCCTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACTGGAAGTCCACTGGGTaGATCCACTGCCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDWKSTG*IHCQVS
Trigger: GGAGACTTGGCAGTGGATCAACCCAGTGGACTTCCA...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACTGCTCTGACACCTGTTaGCTGTCTTCATCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDCSDTC*LSSSRQ
Trigger: CTGCCGAGATGAAGACAGCAAACAGGTGTCAGAGCA...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp GCAGCTTCCATTTCATGGCAGCATCTAGGGTTCCCCCGCAGGATGGGTGGCAACTCATTTACGATGATTTaGAACAGCTGTGTAAGGTCA +
Preference number: 5 (lower is better)
Translates to: AASISWQHLGFPRRMGGNSFTMI*NSCVRS
Trigger: TGACCTTACACAGCTGTTCAAAATCATCGTAAATGA...GTTGCCACCCATCCTGCGGGGGAACCCTAGATGCTGCCATGAAATGGAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCAGCCACTGAGGGTAACTaGGGTCTCTGTGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSATEGN*GLCGLH
Trigger: GTGCAGCCCACAGAGACCCAAGTTACCCTCAGTGGC...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CCCATTCCCAGTCCATTCTACGCCAGAACAGGTAAATGGCAGGGTCTGCTCCTGTCGTGTTTTGAGATTTaGAGCAGGACATTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: PIPSPFYARTGKWQGLLLSCFEI*SRTFKL
Trigger: AAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGA...CAGGAGCAGACCCTGCCATTTACCTGTTCTGGCGTAGAATGGACTGGGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATTATCATACATGGTGGTCCCGTaGGTTCCGACGCTGATATTC +
Preference number: 5 (lower is better)
Translates to: PRGGSFTMILNSCVRSLSYMVVP*VPTLIF
Trigger: GAATATCAGCGTCGGAACCAACGGGACCACCATGTA...TGATAATGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCACCACTCCGGAACACATaGAAGCTGAGCAAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSPLRNT*KLSKEK
Trigger: TTTCTCCTTGCTCAGCTTCAATGTGTTCCGGAGTGG...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp CACAAAGTTTACAGCCCCCTTCCCTATATGCCTGGATCCTCCAAGCTACAAGACTCATTTACGATGATTTaGAACAGCTGTGTAAGGTCA +
Preference number: 5 (lower is better)
Translates to: HKVYSPLPYMPGSSKLQDSFTMI*NSCVRS
Trigger: TGACCTTACACAGCTGTTCAAAATCATCGTAAATGA...GTCTTGTAGCTTGGAGGATCCAGGCATATAGGGAAGGGGGCTGTAAACTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS-3UTR CAA 90 bp AAATACCCAAGAGGAGGCTCATTTACGATGATTTTGAACAGCTGTGTAAGGTCATCGTGTTTTGAGATTTaGAGCAGGACATTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: KYPRGGSFTMILNSCVRSSCFEI*SRTFKL
Trigger: AAGCTTGAATGTCCTGCTCAAAATCTCAAAACACGA...TGACCTTACACAGCTGTTCAAAATCATCGTAAATGAGCCTCCTCTTGGGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp CACCCCAGCCTGGTCGGAGAACTGCAGCCTGGTGGCTaGGCCGGCGGCGAAGTAGCAGCAGCGCCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: HPSLVGELQPGG*AGGEVAAAPGA
Trigger: AGCTCCGGGCGCTGCTGCTACTTCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGCTGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322153.11
ENST00000430026.7
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp TTCCAGCCGGATCCGGGTCTTGCGGCGCAGTCAGGCTaGAGGTGGCAAGGCCCCCGTCCTGGCCCACAGGCT +
Preference number: 6 (lower is better)
Translates to: FQPDPGLAAQSG*RWQGPRPGPQA
Trigger: AGCCTGTGGGCCAGGACGGGGGCCTTGCCACCTGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGCTGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp CAGACACCCCAGCCTGGTCGGAGAACTGCAGCCTGGTaGCTGAGCCGGCGGCGAAGTAGCAGCAGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: QTPQPGRRTAAW*LSRRRSSSSAR
Trigger: CCGGGCGCTGCTGCTACTTCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGCTGGGGTGTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322153.11
ENST00000430026.7
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp GCACAGACACCCCAGCCTGGTCGGAGAACTGCAGCCTaGTGGCTGAGCCGGCGGCGAAGTAGCAGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: AQTPQPGRRTAA*WLSRRRSSSSA
Trigger: GGCGCTGCTGCTACTTCGCCGCCGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGCTGGGGTGTCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322153.11
ENST00000430026.7
ENST00000593993.7
ENST00000600835.6
CDS CAA 90 bp CTCTCGACTCCAGCTGTAGGTTGCCATTCCAGCCGGATCCGGGTCTaGCGGCGCAGTCAGGCTGCAGGTGGCAAGGCCCCCGTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LSTPAVGCHSSRIRV*RRSQAAGGKAPVLA
Trigger: GGCCAGGACGGGGGCCTTGCCACCTGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGCTGGAATGGCAACCTACAGCTGGAGTCGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp TGGGGACTCCCAAGACCACAGGCAGGGCTGGGTCTTTaGCCTGGTGGTGGAGGCCATGGGAGGGGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: WGLPRPQAGLGL*PGGGGHGRGRC
Trigger: ACAGCGGCCCCTCCCATGGCCTCCACCACCAGGCCAAAGACCCAGCCCTGCCTGTGGTCTTGGGAGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS CAA 72 bp CCAGCTGTAGGTTGCCATTCCAGCCGGATCCGGGTCTaGCGGCGCAGTCAGGCTGCAGGTGGCAAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: PAVGCHSSRIRV*RRSQAAGGKAP
Trigger: GGGGGCCTTGCCACCTGCAGCCTGACTGCGCCGCAAGACCCGGATCCGGCTGGAATGGCAACCTACAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CATCCTGAGGTCCGCAGTCGCCCAACTTCCATGGGCTaGTGGGTGTCCGGTGCCGGAACTGCACCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: HPEVRSRPTSMG*WVSGAGTAPQH
Trigger: GTGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGTTGGGCGACTGCGGACCTCAGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp CCTGAGGTCCGCAGTCGCCCAACTTCCATGGGCTGCTaGGTGTCCGGTGCCGGAACTGCACCTCAGCACCAA +
Preference number: 6 (lower is better)
Translates to: PEVRSRPTSMGC*VSGAGTAPQHQ
Trigger: TTGGTGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGTTGGGCGACTGCGGACCTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp TGGCTCCCCAGCTGCCGTCGTCGGAGCTGGAATTCCTaGGCCACATTCATCTCCAGGGGGCAGAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: WLPSCRRRSWNS*ATFISRGQRQD
Trigger: GTCCTGCCTCTGCCCCCTGGAGATGAATGTGGCCCAGGAATTCCAGCTCCGACGACGGCAGCTGGGGAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp CAGAGTGTGACAGTGTACAGCACAGACACCCCAGCCTaGTCGGAGAACTGCAGCCTGGTGGCTGAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: QSVTVYSTDTPA*SENCSLVAEPA
Trigger: CGCCGGCTCAGCCACCAGGCTGCAGTTCTCCGACCAGGCTGGGGTGTCTGTGCTGTACACTGTCACACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322153.11
ENST00000430026.7
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp GGTGTCCGGTGCCGGAACTGCACCTCAGCACCAACCTaGTTATCCGGGGTCTCCCACTCCATACGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GVRCRNCTSAPT*LSGVSHSIRSC
Trigger: GCAGCTGCGTATGGAGTGGGAGACCCCGGATAACCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp GACCTCCGTGCCAGGCGCCAGCCCTTGACAGCCTTCTaGAAGCTCCAGCTGGGTTGGCTGCTCTTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: DLRARRQPLTAF*KLQLGWLLFQG
Trigger: ACCCTGAAAGAGCAGCCAACCCAGCTGGAGCTTCCAGAAGGCTGTCAAGGGCTGGCGCCTGGCACGGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp CCTGGTGGTGGAGGCCATGGGAGGGGCCGCTGTGGATaGGGTCAGGCAGAGCCCTACATAATCCTCAGCCAA +
Preference number: 6 (lower is better)
Translates to: PGGGGHGRGRCG*GQAEPYIILSQ
Trigger: TTGGCTGAGGATTATGTAGGGCTCTGCCTGACCCCATCCACAGCGGCCCCTCCCATGGCCTCCACCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS CCA 72 bp TTGGCCTGGTGGTGGAGGCCATGGGAGGGGCCGCTGTaGATGGGGTCAGGCAGAGCCCTACATAATCCTCAG +
Preference number: 6 (lower is better)
Translates to: LAWWWRPWEGPL*MGSGRALHNPQ
Trigger: CTGAGGATTATGTAGGGCTCTGCCTGACCCCATCCACAGCGGCCCCTCCCATGGCCTCCACCACCAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS CCA 72 bp GGCGCAGTCAGGCTGCAGGTGGCAAGGCCCCCGTCCTaGCCCACAGGCTGCCATTCAATGCAATACGTCATG +
Preference number: 6 (lower is better)
Translates to: GAVRLQVARPPS*PTGCHSMQYVM
Trigger: CATGACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGACGGGGGCCTTGCCACCTGCAGCCTGACTGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CAA 72 bp GCACACGGGGCTGCTCCACTTGCTCCAGGAACTTCCTaGGCTCCCCAGCTGCCGTCGTCGGAGCTGGAATTC +
Preference number: 6 (lower is better)
Translates to: AHGAAPLAPGTS*APQLPSSELEF
Trigger: GAATTCCAGCTCCGACGACGGCAGCTGGGGAGCCAAGGAAGTTCCTGGAGCAAGTGGAGCAGCCCCGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp GCCGAGCCTGAGTCTGCATCCGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTTCTGCAGGCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: AEPESASGYGGS*KQHSLVLQAAP
Trigger: GGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAGGCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000594176.1
ENST00000598019.6
ENST00000600835.6
CDS TCA 72 bp ACGGGCAGGACAGCATGTGGAGCTGTAGTCGGTAAGTaGCCTCCGTGCCAGGCGCCAGCCCTTGACAGCCTT +
Preference number: 6 (lower is better)
Translates to: TGRTACGAVVGK*PPCQAPALDSL
Trigger: AAGGCTGTCAAGGGCTGGCGCCTGGCACGGAGGTCACTTACCGACTACAGCTCCACATGCTGTCCTGCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp AACTTCCATGGGCTGCTGGGTGTCCGGTGCCGGAACTaGACCTCAGCACCAACCTGGTTATCCGGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: NFHGLLGVRCRN*TSAPTWLSGVS
Trigger: GGAGACCCCGGATAACCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CAGTCGCCCAACTTCCATGGGCTGCTGGGTGTCCGGTaGCGGAACTGCACCTCAGCACCAACCTGGTTATCC +
Preference number: 6 (lower is better)
Translates to: QSPNFHGLLGVR*RNCTSAPTWLS
Trigger: GGATAACCAGGTTGGTGCTGAGGTGCAGTTCCGGCACCGGACACCCAGCAGCCCATGGAAGTTGGGCGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CAAGGCCCCCGTCCTGGCCCACAGGCTGCCATTCAATaGAATACGTCATGCTCTGAGCCCGGGCTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: QGPRPGPQAAIQ*NTSCSEPGLAN
Trigger: ATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGACGGGGGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CAA 90 bp CCCTCAGGTAGCTCTGTCTTCTCGAGAGGCTCAGTCCTCTCGCCTTaGTCCCAGGACATCTCTACCACCAGGGCCTCCTGCAGGGATGCC +
Preference number: 6 (lower is better)
Translates to: PSGSSVFSRGSVLSP*SQDISTTRASCRDA
Trigger: GGCATCCCTGCAGGAGGCCCTGGTGGTAGAGATGTCCTGGGACAAAGGCGAGAGGACTGAGCCTCTCGAGAAGACAGAGCTACCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp TCCAGGGGGCAGAGGCAGGACTCAGTATCATCATCCTaGGGTCCGCAGTCGCCCAACTTCCATGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SRGQRQDSVSSS*GPQSPNFHGLL
Trigger: CAGCAGCCCATGGAAGTTGGGCGACTGCGGACCTCAGGATGATGATACTGAGTCCTGCCTCTGCCCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp CCCGAACCTGAGTCTGCATCCGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTTCTGCAGGCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: PEPESASGYGGS*KQHSLVLQAAP
Trigger: GGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAGGTTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS GCA 72 bp CTCCACTTGCTCCAGGAACTTCCTTGGCTCCCCAGCTaGCGTCGTCGGAGCTGGAATTCCTGGGCCACATTC +
Preference number: 6 (lower is better)
Translates to: LHLLQELPWLPS*RRRSWNSWATF
Trigger: GAATGTGGCCCAGGAATTCCAGCTCCGACGACGGCAGCTGGGGAGCCAAGGAAGTTCCTGGAGCAAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CTGTGTGCCTGGCTCTGGAGAGGCAGCGGAGTGTTCTaGAACCTCTGGAGCTGCCCTCCTAGAAACCCCAAC +
Preference number: 6 (lower is better)
Translates to: LCAWLWRGSGVF*NLWSCPPRNPN
Trigger: GTTGGGGTTTCTAGGAGGGCAGCTCCAGAGGTTGCAGAACACTCCGCTGCCTCTCCAGAGCCAGGCACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594176.1
ENST00000600835.6
CDS CCA 72 bp CATCCGGATATGGCGGGTCCTGAAAACAGCACTCACTaGTTCTGCAGGCAGCGCCCTGCCTGGACAGCAGGA +
Preference number: 6 (lower is better)
Translates to: HPDMAGPENSTH*FCRQRPAWTAG
Trigger: TCCTGCTGTCCAGGCAGGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322153.11
ENST00000430026.7
ENST00000593993.7
ENST00000594176.1
ENST00000597416.1
ENST00000598019.6
ENST00000600835.6
CDS GCA 72 bp ACCTGGTTATCCGGGGTCTCCCACTCCATACGCAGCTaGCCGGCCAACTTGGACACCTTGATGTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: TWLSGVSHSIRS*PANLDTLMSPR
Trigger: TCTGGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTGGGAGACCCCGGATAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CCTGGCCCACAGGCTGCCATTCAATGCAATACGTCATaGTCTGAGCCCGGGCTGGCCAATACATGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PGPQAAIQCNTS*SEPGLANTWWS
Trigger: GGACCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTGGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp AGCGGACAACATACTCCTTTAGGACGCCGGGACAGGTaGTCAGCAGGGATGGTGCCCAGTCCACAGACACAG +
Preference number: 6 (lower is better)
Translates to: SGQHTPLGRRDR*SAGMVPSPQTQ
Trigger: CTGTGTCTGTGGACTGGGCACCATCCCTGCTGAGCACCTGTCCCGGCGTCCTAAAGGAGTATGTTGTCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CCAGGACATCTCTACCACCAGGGCCTCCTGCAGGGATaGCTCTTCCTGGAAGTCCACTGGGTTGATCCACTG +
Preference number: 6 (lower is better)
Translates to: PGHLYHQGLLQG*LFLEVHWVDPL
Trigger: CAGTGGATCAACCCAGTGGACTTCCAGGAAGAGGCATCCCTGCAGGAGGCCCTGGTGGTAGAGATGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp TCTACCACCAGGGCCTCCTGCAGGGATGCCTCTTCCTaGAAGTCCACTGGGTTGATCCACTGCCAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: STTRASCRDASS*KSTGLIHCQVS
Trigger: GGAGACTTGGCAGTGGATCAACCCAGTGGACTTCCAGGAAGAGGCATCCCTGCAGGAGGCCCTGGTGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CAA 72 bp GGGGTCTCCCACTCCATACGCAGCTGCCCGGCCAACTaGGACACCTTGATGTCTCCCAGAGGAGGCTCATAT +
Preference number: 6 (lower is better)
Translates to: GVSHSIRSCPAN*DTLMSPRGGSY
Trigger: ATATGAGCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTGGGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp AGAGATCCTGAGTCTGCATCCGGATATGGCGGGTCCTaGAAACAGCACTCACTGGTTCTGCAGGCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: RDPESASGYGGS*KQHSLVLQAAP
Trigger: GGGCGCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAGGATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430026.7
CDS TCA 72 bp CCCACAGGCTGCCATTCAATGCAATACGTCATGCTCTaGGCCCGGGCTGGCCAATACATGGTGGTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: PTGCHSMQYVML*ARAGQYMVVPL
Trigger: CAACGGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGGCAGCCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS GCA 72 bp CGCAGGCCACTGAGGGTAACTTGGGTCTCTGTGGGCTaGACGGGATGCTCTGACACCTGTTTGCTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: RRPLRVTWVSVG*TGCSDTCLLSS
Trigger: TGAAGACAGCAAACAGGTGTCAGAGCATCCCGTGCAGCCCACAGAGACCCAAGTTACCCTCAGTGGCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CAA 72 bp AATGTTCAGAGAGGCGGCTGGCTACTCCAGGGCAACTaGAACCTGGTAAGAATGGGCCAGCAGGTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: NVQRGGWLLQGN*NLVRMGQQVVG
Trigger: CCCCACCACCTGCTGGCCCATTCTTACCAGGTTCAAGTTGCCCTGGAGTAGCCAGCCGCCTCTCTGAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS CAA 72 bp TCCTGCAGGGATGCCTCTTCCTGGAAGTCCACTGGGTaGATCCACTGCCAAGTCTCCTTCCCTCCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: SCRDASSWKSTG*IHCQVSFPPGN
Trigger: GTTCCCTGGAGGGAAGGAGACTTGGCAGTGGATCAACCCAGTGGACTTCCAGGAAGAGGCATCCCTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp GGAGGTAGACGCCAGAGCAGCGGTGACCCCACGGAGTaGTCAGTTGTGATAAGGGACTCACAGCAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: GGRRQSSGDPTE*SVVIRDSQQVK
Trigger: CTTCACTTGCTGTGAGTCCCTTATCACAACTGATCACTCCGTGGGGTCACCGCTGCTCTGGCGTCTACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600835.6
CDS TCA 72 bp CTGGCCAATACATGGTGGTCCCGTTGGTTCCGACGCTaGTATTCAGAGCCACTGGTTCTGTGTGGGTGTCGG +
Preference number: 6 (lower is better)
Translates to: LANTWWSRWFRR*YSEPLVLCGCR
Trigger: CCGACACCCACACAGAACCAGTGGCTCTGAATATCAGCGTCGGAACCAACGGGACCACCATGTATTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp GATGGTGCCCAGTCCACAGACACAGAGTCCAAGCTATaGTTCTTCACCGAGACGTGGTGCGGTGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: DGAQSTDTESKL*FFTETWCGVPA
Trigger: AGCTGGGACACCGCACCACGTCTCGGTGAAGAATCATAGCTTGGACTCTGTGTCTGTGGACTGGGCACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp GGTTCTGTGTGGGTGTCGGCAGGAATGTGCCACGTCTaGTTCAGGCCAGGACCAAATTGGTTCGAGGAGATG +
Preference number: 6 (lower is better)
Translates to: GSVWVSAGMCHV*FRPGPNWFEEM
Trigger: CATCTCCTCGAACCAATTTGGTCCTGGCCTGAACCAGACGTGGCACATTCCTGCCGACACCCACACAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp CCATTCAATGCAATACGTCATGCTCTGAGCCCGGGCTaGCCAATACATGGTGGTCCCGTTGGTTCCGACGCT +
Preference number: 6 (lower is better)
Translates to: PFNAIRHALSPG*PIHGGPVGSDA
Trigger: AGCGTCGGAACCAACGGGACCACCATGTATTGGCCAGCCCGGGCTCAGAGCATGACGTATTGCATTGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6
CDS CAA 72 bp ACTGCAAAATGGGCTTTTGTGAGTATGAAGGAGGGCTaGGCTTGCAGTGAGCGCTGTCCACCCGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: TAKWAFVSMKEG*ACSERCPPAGQ
Trigger: CTGGCCAGCGGGTGGACAGCGCTCACTGCAAGCCAAGCCCTCCTTCATACTCACAAAAGCCCATTTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594176.1
ENST00000598019.6
CDS CAA 90 bp TGGTTATCCGGGGTCTCCCACTCCATACGCAGCTGCCCGGCCAACTaGGACACCTTGATGTCTCCCAGAGGAGGCTCATATTTAACTGAG +
Preference number: 6 (lower is better)
Translates to: WLSGVSHSIRSCPAN*DTLMSPRGGSYLTE
Trigger: CTCAGTTAAATATGAGCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTGGGAGACCCCGGATAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS TCA 72 bp GGTCAGGCAGAGCCCTACATAATCCTCAGCCAACAATaGGGAACTGCCCCGAACCTGAGTCTGCATCCGGAT +
Preference number: 6 (lower is better)
Translates to: GQAEPYIILSQQ*GTAPNLSLHPD
Trigger: ATCCGGATGCAGACTCAGGTTCGGGGCAGTTCCTCATTGTTGGCTGAGGATTATGTAGGGCTCTGCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS GCA 72 bp AAATGGGCTTTTGTGAGTATGAAGGAGGGCTTGGCTTaGAGTGAGCGCTGTCCACCCGCTGGCCAGTGTGAT +
Preference number: 6 (lower is better)
Translates to: KWAFVSMKEGLA*SERCPPAGQCD
Trigger: ATCACACTGGCCAGCGGGTGGACAGCGCTCACTGCAAGCCAAGCCCTCCTTCATACTCACAAAAGCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594176.1
ENST00000598019.6
CDS GCA 72 bp AGAGCCCTACATAATCCTCAGCCAACAATGAGGAACTaGCCCGAACCTGAGTCTGCATCCGGATATGGCGGG +
Preference number: 6 (lower is better)
Translates to: RALHNPQPTMRN*PEPESASGYGG
Trigger: CCCGCCATATCCGGATGCAGACTCAGGTTCGGGGCAGTTCCTCATTGTTGGCTGAGGATTATGTAGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS CAA 72 bp CACTCCATACGCAGCTGCCCGGCCAACTTGGACACCTaGATGTCTCCCAGAGGAGGCTCATATTTAACTGAG +
Preference number: 6 (lower is better)
Translates to: HSIRSCPANLDT*MSPRGGSYLTE
Trigger: CTCAGTTAAATATGAGCCTCCTCTGGGAGACATCAAGGTGTCCAAGTTGGCCGGGCAGCTGCGTATGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322153.11
ENST00000593993.7
ENST00000600835.6
CDS CCA 72 bp ATTAGTCATTGTTGTTGTTCCCCAGTGGCCTCTGCCTaGCAGCTGCCAACGAACATTTATGGAGCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: ISHCCCSPVASA*QLPTNIYGAPA
Trigger: AGCAGGCGCTCCATAAATGTTCGTTGGCAGCTGCCAGGCAGAGGCCACTGGGGAACAACAACAATGACTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594176.1
CDS TCA 72 bp GTACCGACCAATCTGAACGGACACAGACACCAGCCCTaGGACCATGCTAGGGAAGTGATAATGTTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: VPTNLNGHRHQP*DHAREVIMFRE
Trigger: CTCTCTGAACATTATCACTTCCCTAGCATGGTCTCAGGGCTGGTGTCTGTGTCCGTTCAGATTGGTCGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597416.1
CDS GCA 72 bp AAGCAGGAGAATCTCTTGAATCTGGAAGGCGGAGGTTaGAGTGAGCTGAGATCATGCCATCTGTGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: KQENLLNLEGGG*SELRSCHLCGC
Trigger: ACACCCACACAGATGGCATGATCTCAGCTCACTGCAACCTCCGCCTTCCAGATTCAAGAGATTCTCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322153.11
CDS GCA 72 bp AAAGATGGTAATGTAGTAACACTTTTCCTGCCCCATTaGCCCAGACTCTCGACTCCAGCTGTAGGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: KDGNVVTLFLPH*PRLSTPAVGCH
Trigger: ATGGCAACCTACAGCTGGAGTCGAGAGTCTGGGGCAATGGGGCAGGAAAAGTGTTACTACATTACCATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593993.7
ENST00000600835.6