RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IKZF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000123411

Ensembl transcript IDs: ENST00000262032.9, ENST00000431367.6, ENST00000547167.6, ENST00000547556.1, ENST00000547668.5, ENST00000547791.2, ENST00000549519.5, ENST00000551103.5, ENST00000551124.5, ENST00000551701.5, ENST00000552689.1

Found 813 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAGCTCCAGTCGACCAGGGAGGGGCTG +
Preference number: 1 (lower is better)
Translates to: VEEGTSISQVLRSLT*FSGSWKLQSTREGL
Trigger: CAGCCCCTCCCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CCA 90 bp TCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCTCGGGATCCTaGAAGCTCCAGTCGACCAGGGAGGGGCTGCATCTGGGTGTAGAC +
Preference number: 1 (lower is better)
Translates to: SISQVLRSLTCFSGS*KLQSTREGLHLGVD
Trigger: GTCTACACCCAGATGCAGCCCCTCCCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR GCA 90 bp GACCCTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGTCCTGGCAGCCATTGCTGGGGGATG +
Preference number: 1 (lower is better)
Translates to: DPEGGIPPPQPDLRG*FLCLWSPGSHCWGM
Trigger: CATCCCCCAGCAATGGCTGCCAGGACTCCACAGACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CCA 90 bp GACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACGTGCCCGTGCTCATGCTGGGATAAT +
Preference number: 1 (lower is better)
Translates to: DPSSVVPIPVLLEQG*NGVKGTCPCSCWDN
Trigger: ATTATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 90 bp GTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGG +
Preference number: 1 (lower is better)
Translates to: VASSEGYKAKLLGKW*GQGSMPVVRAVEWW
Trigger: CCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATaGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGG +
Preference number: 1 (lower is better)
Translates to: QVASSEGYKAKLLGK*WGQGSMPVVRAVEW
Trigger: CCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 90 bp TTGACCCACTCCTTTCCCATGCCCTGGTTCCCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGACAGAGGGTTGCAGACCTAGCCTTG +
Preference number: 1 (lower is better)
Translates to: LTHSFPMPWFPIRHL*LPICQRQRVADLAL
Trigger: CAAGGCTAGGTCTGCAACCCTCTGTCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGAGTGGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR GCA 90 bp CTATTGGCCAGACGATCGATGAAAGTTGGCCGCTCAGAGGATGAGTaGAGCATGGAGTCTGGCACCATCTCCAGGTCACGTATTTCGTCA +
Preference number: 1 (lower is better)
Translates to: LLARRSMKVGRSEDE*SMESGTISRSRISS
Trigger: TGACGAAATACGTGACCTGGAGATGGTGCCAGACTCCATGCTGCACTCATCCTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR TCA 90 bp CAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCTCATGCTGGGATAATTTTTGGTTAT +
Preference number: 1 (lower is better)
Translates to: QLYPSQSCWNKGGMG*RARARAHAGIIFGY
Trigger: ATAACCAAAAATTATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 90 bp TGGAGGAGAAAGAGAAGAATTTTGACCCACTCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTGTGGCTCCCAATCTGTCAGAGACAG +
Preference number: 1 (lower is better)
Translates to: WRRKRRILTHSFPMP*FPIRHLWLPICQRQ
Trigger: CTGTCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGAGTGGGTCAAAATTCTTCTCTTTCTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 90 bp GGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTTAC +
Preference number: 1 (lower is better)
Translates to: GLGQKTLVERNLHLQ*SCISFCPFSLILGY
Trigger: GTAACCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR GCA 90 bp CCTTGGCAGCATCTATTTATTGCTACATTGTCAAGGAGGAACAATTaGCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGAAA +
Preference number: 1 (lower is better)
Translates to: PWQHLFIATLSRRNN*PTMLLPANLVLLGK
Trigger: TTTCCCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGACAATGTAGCAATAAATAGATGCTGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR TCA 90 bp GAAGAATTAGATAATGTAAAGGGTGAGGACTTAAAGCAAGAAGCTTaGAGTCTCTTAGTACTAAGAGGAGCTTCCTACCCCTGGGGCTGC +
Preference number: 1 (lower is better)
Translates to: EELDNVKGEDLKQEA*SLLVLRGASYPWGC
Trigger: GCAGCCCCAGGGGTAGGAAGCTCCTCTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAGTCCTCACCCTTTACATTATCTAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR TCA 90 bp GACCAGATCTATCACATCCTAGAGGGAGATCCTGAATGTAGGCTTTaGGAACTCATATTACTAGGGGAATATGACCTATTACTAGGGGAA +
Preference number: 1 (lower is better)
Translates to: DQIYHILEGDPECRL*ELILLGEYDLLLGE
Trigger: TTCCCCTAGTAATAGGTCATATTCCCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGGATCTCCCTCTAGGATGTGATAGATCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCGGGAATGAGAGGGTaGATCCTGCTGGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPGMRG*ILLGGS
Trigger: GCTCCCTCCCAGCAGGATTCACCCTCTCATTCCCGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGCCGGGAATGAGAGGGTaGATCCTGCTGGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLEPGMRG*ILLGGS
Trigger: GCTCCCTCCCAGCAGGATTCACCCTCTCATTCCCGG...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCAGGAGCCCGGGAATaGGAGGGTGAATCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPGARE*EGESCW
Trigger: CCAGCAGGATTCACCCTCTCATTCCCGGGCTCCTGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCT +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMKGGMG*RARARA
Trigger: AGCACGGGCACGTGCCCTTCACCCCATTCCACCCTT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCTGTGGGAGAGGAGACTaGGTGTGTGCGGAGGTGACC +
Preference number: 2 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGCGRGD*VCAEVT
Trigger: GGTCACCTCCGCACACACTCAGTCTCCTCTCCCACA...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp TTGAAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCT +
Preference number: 2 (lower is better)
Translates to: LKAFTGSPLSPTTRSTSLKGGMG*RARARA
Trigger: AGCACGGGCACGTGCCCTTCACCCCATTCCACCCTT...CAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGCGCAGACGTCACACTTaGGCTTGCCATTGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLERRRHT*ACHWAA
Trigger: GGCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCG...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCGCTCAGAGGATGAGTaGAGCATGGAGTCTGGCACC +
Preference number: 2 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGRSEDE*SMESGT
Trigger: GGTGCCAGACTCCATGCTGCACTCATCCTCTGAGCG...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCCAGGCTCTAGGCTGTaGTGTGCCACCAACTCCACA +
Preference number: 2 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGPGSRL*CATNST
Trigger: TGTGGAGTTGGTGGCACACCACAGCCTAGAGCCTGG...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGACCCCTCCTGTGGCTTaGGGTCCTCTTTGGCGTAGG +
Preference number: 2 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLETPPVA*GPLWRR
Trigger: CCTACGCCAAAGAGGACCCCAAGCCACAGGAGGGGT...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGAGGAAGAGAATAGGTaGGGAGGGGTCAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMEEENR*GGVRVR
Trigger: CCTGACCCTGACCCCTCCTCACCTATTCTCTTCCTC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAATGCCCCCAGGGGAGTaGGGCTCTGGCCCACTCCCA +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGMPPGE*GSGPLP
Trigger: TGGGAGTGGGCCAGAGCCTCACTCCCCTGGGGGCAT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMSETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGTCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 2 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLESETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGTGCGCTTGTGCACCATaGGCACGTTGGGTCCAATAC +
Preference number: 2 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLECACAP*ARWVQY
Trigger: GTATTGGACCCAACGTGCTCATGGTGCACAAGCGCA...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGTCAGGGCAGTGGAGTaGTGGACTGAGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSVRAVE*WTEERG
Trigger: CCCTCTCTCCTCAGTCCACCACTCCACTGCCCTGAC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CCGGTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCCCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PVEEGTSISQVLRSLTCFPIRHL*LPICQR
Trigger: TCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGG...GAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGAGGGTGAATCCTGCTaGGAGGGAGCAGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSEGESC*EGAAEG
Trigger: GCCTTCTGCTGCTCCCTCCCAGCAGGATTCACCCTC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCATCCCAGTCTTGCTaGAACAAGGGTGGAATGGGG +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPSQSC*NKGGMG
Trigger: CCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCAGGATGAGTGCAGCATaGAGTCTGGCACCATCTCCA +
Preference number: 2 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKARMSAA*SLAPSP
Trigger: TGGAGATGGTGCCAGACTCCATGCTGCACTCATCCT...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGGCCCACCACAATGGTaGGAGGTGGCTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKGPPQW*EVAGVG
Trigger: CCCCACCCCAGCCACCTCCCACCATTGTGGTGGGCC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCCCGAAGCACTTCCTTaGAGGGGCCTGGGGTGCCCC +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRPEALP*RGLGCP
Trigger: GGGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCT +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGKGGMG*RARARA
Trigger: AGCACGGGCACGTGCCCTTCACCCCATTCCACCCTT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAATAGCCAAGGGTCTCTaGAGTAGCCAGCAGTCCCCC +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERIAKGL*SSQQSP
Trigger: GGGGGACTGCTGGCTACTGCAGAGACCCTTGGCTAT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCT +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMLLGKW*GQGSMP
Trigger: AGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 2 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAGAAGGCAGCATGACTaGGGGGCTGAAACAACCCCT +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERRRQHD*GAETTP
Trigger: AGGGGTTGTTTCAGCCCCTCAGTCATGCTGCCTTCT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGAGACTACTCTGCTCTaGGCTAACCTCCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMETTLL*ANLPIF
Trigger: GAAAATGGGGAGGTTAGCTCAGAGCAGAGTAGTCTC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCCTTGGGCTTCAGTGCTaGGACTCTGTAGGTAGTTAT +
Preference number: 2 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKALGLQC*DSVGSY
Trigger: ATAACTACCTACAGAGTCTCAGCACTGAAGCCCAAG...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATGGCCGCTCAGAGGATaGGTGCAGCATGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGWPLRG*VQHGVW
Trigger: CCAGACTCCATGCTGCACTCATCCTCTGAGCGGCCA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTACCCATCCCAGTCTTaGTGGAACAAGGGTGGAATG +
Preference number: 2 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPYPSQS*WNKGGM
Trigger: CATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTA...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCACAATGCTTCTCCCTaGCAATCTGGTTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMHNASP*QSGSLG
Trigger: CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGGGACGCAGATGCTCTaGACCCACAAAGGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGGTQML*THKGQG
Trigger: TCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGTCAGGGCAGTGGAGTaGTGGACTGAGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGVRAVE*WTEERG
Trigger: CCCTCTCTCCTCAGTCCACCACTCCACTGCCCTGAC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAGTGGAAAGGAGTTGTaGACAGGAGGGTGGGGGAGT +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERSGKEL*TGGWGS
Trigger: ACTCCCCCACCCTCCTGTCCACAACTCCTTTCCACT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPPIRHL*LPICQR
Trigger: TCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPIRHL*LPICQR
Trigger: TCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACTCCTACCCTGTGTCTaGGAGCTGAGTGTAGAAGGG +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERLLPCV*ELSVEG
Trigger: CCCTTCTACACTCAGCTCCCAGACACAGGGTAGGAG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 2 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp CCGGTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCTATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: PVEEGTSISQVLRSLTCFYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...GAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCACCCCAGGGTGCCGTTaGGGATTCTTCCTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSTPGCR*GFFLSL
Trigger: TAGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGGAGTGTGTGCGGAGGTaGCCAGTGAGTGCATCACGC +
Preference number: 2 (lower is better)
Translates to: VCHQLHILFIATRVHIIGECVRR*PVSASR
Trigger: GCGTGATGCACTCACTGGTCACCTCCGCACACACTC...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGGCAGTGCTCACACTTaGAGGCCTTCACAGGCTCAC +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGGSAHT*RPSQAH
Trigger: GTGAGCCTGTGAAGGCCTTCAAGTGTGAGCACTGCC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCGGAGGGGACGCAGATaGTCTGCACCCACAAAGGCC +
Preference number: 2 (lower is better)
Translates to: REWDGCGLGQKTLVERNLRRGRR*SAPTKA
Trigger: GGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCT +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERLLGKW*GQGSMP
Trigger: AGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTG +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERSFPMP*FPIRHL
Trigger: CAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCCAATCTGGTTCTCTTaGGGAAACCTCAGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSPIWFS*GNLRVG
Trigger: CCCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CAA 90 bp CCTACAAACTTCTGGGGTGTGGAACGCTTGCGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAAGTTGGCCGCTCAGAGGATGAGTGC +
Preference number: 2 (lower is better)
Translates to: PTNFWGVERLRLVRL*ARRSMKVGRSEDEC
Trigger: GCACTCATCCTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCACACCCCAGAAGTTTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGGGCCTTTCACCAGTGTaGCTGCGCTTGTGCACCATG +
Preference number: 2 (lower is better)
Translates to: VCHQLHILFIATRVHIIGGLSPV*LRLCTM
Trigger: CATGGTGCACAAGCGCAGTCACACTGGTGAAAGGCC...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGGAGGTCTGAGAGGCTaGAGCGCATCTGCTTTTCGC +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRGGLRG*SASAFR
Trigger: GCGAAAAGCAGATGCGCTTCAGCCTCTCAGACCTCC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGACAGGCGTGAGTTCTaGGATGCAATTGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGDRREF*DAIGGW
Trigger: CCACCCACCAATTGCATCTCAGAACTCACGCCTGTC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGATCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGSETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCAAGGGCACGTGCCCGTaGTCATGCTGGGATAATTTT +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSKGTCP*SCWDNF
Trigger: AAAATTATCCCAGCATGAGCACGGGCACGTGCCCTT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGCTGGCCCCAGCAGTCTaGTTGACTCCTCATCGCTGT +
Preference number: 2 (lower is better)
Translates to: VCHQLHILFIATRVHIIGLAPAV*LTPHRC
Trigger: ACAGCGATGAGGAGTCAAGCAGACTGCTGGGGCCAG...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAAGTGGAAAGGAGTTGTaGACAGGAGGGTGGGGGAGT +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGSGKEL*TGGWGS
Trigger: ACTCCCCCACCCTCCTGTCCACAACTCCTTTCCACT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 2 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERPIRHL*LPICQR
Trigger: TCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGAGGGTGAATCCTGCTaGGAGGGAGCAGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: REWDGCGLGQKTLVERNLEGESC*EGAAEG
Trigger: GCCTTCTGCTGCTCCCTCCCAGCAGGATTCACCCTC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGGATGGCTGTGGCCTTaGGCAGAAAACTCTTGTAGA +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERGWLWP*AENSCR
Trigger: TCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCAGTCTCTGCTCTCATaGGCACAGAGTATAGCCTCA +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSQSLLS*AQSIAS
Trigger: TGAGGCTATACTCTGTGCCCATGAGAGCAGAGACTG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGAGGGGAGTGAGGCTCTaGCCCACTCCCATCACAGTA +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNERGVRL*PTPITV
Trigger: TACTGTGATGGGAGTGGGCCAGAGCCTCACTCCCCT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGAGGGCTTGCCCACTGTaGGAGAGGAGACTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNERACPL*ERRLSV
Trigger: CACACTCAGTCTCCTCTCCCACAGTGGGCAAGCCCT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGTGCTTCTCGGGATCCTaGAAGCTCCAGTCGACCAGG +
Preference number: 2 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKCFSGS*KLQSTR
Trigger: CCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCA...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAGAAGGCAGCATGACTaGGGGGCTGAAACAACCCCT +
Preference number: 2 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKRRQHD*GAETTP
Trigger: AGGGGTTGTTTCAGCCCCTCAGTCATGCTGCCTTCT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGAGAAGGCAGCATGACTaGGGGGCTGAAACAACCCCT +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRRRQHD*GAETTP
Trigger: AGGGGTTGTTTCAGCCCCTCAGTCATGCTGCCTTCT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGAAACAGCCTTTGGTTTaGATCTCAAGGAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMKQPLV*ISRKQR
Trigger: TCTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATGGCCAGACGATCGATaGAAGTTGGCCGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTWPDDR*KLAAQR
Trigger: CCTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 2 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTSETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 2 (lower is better)
Translates to: PPLPSLAPGLALPVSALMCPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNELLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 2 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKLLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCCATCCCAGTCTTGCTaGAACAAGGGTGGAATGGGG +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRPSQSC*NKGGMG
Trigger: CCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCCATCCCAGTCTTGCTaGAACAAGGGTGGAATGGGG +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEPSQSC*NKGGMG
Trigger: CCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAAGAGTGGGATGGCTGTaGCCTTGGGCAGAAAACTCT +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGRVGWL*PWAENS
Trigger: AGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTGGCCAGCCAAAGCTTaGGCTTCAGTGCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEWPAKA*ASVLRL
Trigger: GAGTCTCAGCACTGAAGCCCAAGCTTTGGCTGGCCA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGTTCTGAGATGCAATTaGTGGGTGGAAGGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEVLRCN*WVEGGG
Trigger: CCCTCCGCCTTCCACCCACCAATTGCATCTCAGAAC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CAA 90 bp ATCTGCTTTTCGCCTACAAACTTCTGGGGTGTGGAACGCTTGCGTTaGGTGAGGCTATTGGCCAGACGATCGATGAAAGTTGGCCGCTCA +
Preference number: 2 (lower is better)
Translates to: ICFSPTNFWGVERLR*VRLLARRSMKVGRS
Trigger: TGAGCGGCCAACTTTCATCGATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGAAAAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CAA 90 bp AAGCGCATCTGCTTTTCGCCTACAAACTTCTGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTGGCCAGACGATCGATGAAAGTTGGC +
Preference number: 2 (lower is better)
Translates to: KRICFSPTNFWGVER*RLVRLLARRSMKVG
Trigger: GCCAACTTTCATCGATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGAAAAGCAGATGCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGAGGAAGAGAATAGGTaGGGAGGGGTCAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: RAKVGPGAGISIKTEELDEEENR*GGVRVR
Trigger: CCTGACCCTGACCCCTCCTCACCTATTCTCTTCCTC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGAAAGAGAAGAATTTTaGCCCACTCCTTTCCCATGC +
Preference number: 2 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSEREEF*PTPFPC
Trigger: GCATGGGAAAGGAGTGGGTCAAAATTCTTCTCTTTC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGACCCCAGGGTGCCGTTaGGGATTCTTCCTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNETPGCR*GFFLSL
Trigger: TAGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCCCAGCAGTCTGCTTaGCTCCTCATCGCTGTACAT +
Preference number: 2 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPQQSA*LLIAVH
Trigger: ATGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAATCATAGGGGAGGTCTaGGAGGCTGAAGCGCATCTG +
Preference number: 2 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTIIGEV*EAEAHL
Trigger: CAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGAT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCCACTCCTTTCCCATaGCCTGGTTCCCAATTAGGC +
Preference number: 2 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPTPFP*PGSQLG
Trigger: GCCTAATTGGGAACCAGGGCATGGGAAAGGAGTGGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATACCCATCCCAGTCTTaGTGGAACAAGGGTGGAATG +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGYPSQS*WNKGGM
Trigger: CATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKLRSLT*FSGSWK
Trigger: CTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGT +
Preference number: 2 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGPDLRG*FLCLWS
Trigger: ACTCCACAGACACAGAAAGCAACCACGAAGATCGGG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 2 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAGAGTGGGATGGCTGTaGCCTTGGGCAGAAAACTCT +
Preference number: 2 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGRVGWL*PWAENS
Trigger: AGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGAGAGTGGGATGGCTGTaGCCTTGGGCAGAAAACTCT +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRRVGWL*PWAENS
Trigger: AGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGAAGGAGGCACCACACTaGTTGCAATGGAAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRKEAPH*LQWKGL
Trigger: AAGGCCCTTCCATTGCAACCAGTGTGGTGCCTCCTT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTCGCCTACAAACTTCTaGGGTGTGGAACGCTTGCGT +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRSPTNF*GVERLR
Trigger: ACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCAACGCTTGCGTTTGGTaGGGCTATTGGCCAGACGAT +
Preference number: 2 (lower is better)
Translates to: REWDGCGLGQKTLVERNLNACVW*GYWPDD
Trigger: ATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTT...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGAAGGGCACGTGCCCGTaGTCATGCTGGGATAATTTT +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEKGTCP*SCWDNF
Trigger: AAAATTATCCCAGCATGAGCACGGGCACGTGCCCTT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGACAATTGCCCCACAATaGTTCTCCCTGCCAATCTGG +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNETIAPQ*FSLPIW
Trigger: CCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 2 (lower is better)
Translates to: VCHQLHILFIATRVHIIGRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAAGTGGAAAGGAGTTGTaGACAGGAGGGTGGGGGAGT +
Preference number: 2 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKSGKEL*TGGWGS
Trigger: ACTCCCCCACCCTCCTGTCCACAACTCCTTTCCACT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 2 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERCPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACTCCTACCCTGTGTCTaGGAGCTGAGTGTAGAAGGG +
Preference number: 2 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKLLPCV*ELSVEG
Trigger: CCCTTCTACACTCAGCTCCCAGACACAGGGTAGGAG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGATTCTCCCTGCCAATCTaGTTCTCTTGGGGAAACCTC +
Preference number: 2 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGFSLPI*FSWGNL
Trigger: GAGGTTTCCCCAAGAGAACCAGATTGGCAGGGAGAA...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGACGTATTTCGTCACCTaGTTGGCCAGCCAAAGCTTG +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRTYFVT*LASQSL
Trigger: CAAGCTTTGGCTGGCCAACCAGGTGACGAAATACGT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGAAAGAGAAGAATTTTaGCCCACTCCTTTCCCATGC +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGEREEF*PTPFPC
Trigger: GCATGGGAAAGGAGTGGGTCAAAATTCTTCTCTTTC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAACGTGCCCGTGCTCATaGTGGGATAATTTTTGGTTA +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGTCPCS*WDNFWL
Trigger: TAACCAAAAATTATCCCAGCATGAGCACGGGCACGT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAGTCAGGGCAGTGGAGTaGTGGACTGAGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LKIRREKRDTRFSLPLILVRAVE*WTEERG
Trigger: CCCTCTCTCCTCAGTCCACCACTCCACTGCCCTGAC...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAATCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTG +
Preference number: 2 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKSFPMP*FPIRHL
Trigger: CAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGNLHLQ*SCISFC
Trigger: GCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNENLHLQ*SCISFC
Trigger: GCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAATTTCGTCACCTGGTTaGCCAGCCAAAGCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKISSPG*PAKAWA
Trigger: AGCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAAT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CAA 90 bp GGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCACTaGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTA +
Preference number: 2 (lower is better)
Translates to: GCGLGQKTLVERNLH*QWSCISFCPFSLIL
Trigger: TAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACCTGAATGTAGGCTTTaGGAACTCATATTACTAGGG +
Preference number: 2 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGPECRL*ELILLG
Trigger: CCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGACGTGCCCGTGCTCATaGTGGGATAATTTTTGGTTA +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNETCPCS*WDNFWL
Trigger: TAACCAAAAATTATCCCAGCATGAGCACGGGCACGT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGACGTGCCCGTGCTCATaGTGGGATAATTTTTGGTTA +
Preference number: 2 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGTCPCS*WDNFWL
Trigger: TAACCAAAAATTATCCCAGCATGAGCACGGGCACGT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAACGTGCCCGTGCTCATaGTGGGATAATTTTTGGTTA +
Preference number: 2 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKTCPCS*WDNFWL
Trigger: TAACCAAAAATTATCCCAGCATGAGCACGGGCACGT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCAGGCTGAAGCGCATCTaGTTTTCGCCTACAAACTTC +
Preference number: 2 (lower is better)
Translates to: REWDGCGLGQKTLVERNLRLKRI*FSPTNF
Trigger: GAAGTTTGTAGGCGAAAAGCAGATGCGCTTCAGCCT...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAGTGTCTGTGGAGTCCTaGCAGCCATTGCTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: LKIRREKRDTRFSLPLILVSVES*QPLLGD
Trigger: ATCCCCCAGCAATGGCTGCCAGGACTCCACAGACAC...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CAA 90 bp CCCTTGGCAGCATCTATTTATTGCTACATTGTCAAGGAGGAACAATaGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: PLAASIYCYIVKEEQ*PHNASPCQSGSLGE
Trigger: TTCCCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGACAATGTAGCAATAAATAGATGCTGCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGTATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAAAATTGGCCTAAAGTaGAAAGGAGTTGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKKIGLK*KGVVDR
Trigger: CCTGTCCACAACTCCTTTCCACTTTAGGCCAATTTT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAAAATTGGCCTAAAGTaGAAAGGAGTTGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKKIGLK*KGVVDR
Trigger: CCTGTCCACAACTCCTTTCCACTTTAGGCCAATTTT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CAA 90 bp GGATGTTTGAGGTTCCAGAGCTGGAAGGCTCTGAAAAGTAGGATTTaGTACCTAAGACCCTGGTTAAAGTGCAGTGATGGTCTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: GCLRFQSWKALKSRI*YLRPWLKCSDGLER
Trigger: TCTCTCCAGACCATCACTGCACTTTAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAGAGCCTTCCAGCTCTGGAACCTCAAACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCTGAATGTAGGCTTTaGGAACTCATATTACTAGGG +
Preference number: 2 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPECRL*ELILLG
Trigger: CCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCAGGGGCTCAGACAATaGATCTTCCACAATCACGCT +
Preference number: 2 (lower is better)
Translates to: GLLEDLREKNWPKVERSCQGLRQ*IFHNHA
Trigger: AGCGTGATTGTGGAAGATTCATTGTCTGAGCCCCTG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 2 (lower is better)
Translates to: GLLEDLREKNWPKVERSCRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCTGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 2 (lower is better)
Translates to: REWDGCGLGQKTLVERNLCPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGATTACTAGGGGAATATaGCCTATTACTAGGGGAATA +
Preference number: 2 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRITRGI*PITRGI
Trigger: TATTCCCCTAGTAATAGGTCATATTCCCCTAGTAAT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTGAATGTAGGCTTTaGGAACTCATATTACTAGGG +
Preference number: 2 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKPECRL*ELILLG
Trigger: CCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGCAGCATCTATTTATTaGTACATTGTCAAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEAASIY*YIVKEE
Trigger: TTCCTCCTTGACAATGTAGCAATAAATAGATGCTGC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACTAAGAGAGAAAAATTaGCCTAAAGTGGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKLREKN*PKVERS
Trigger: ACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CAA 90 bp TGGGCAGAAAACTCTTGTAGAAAGAAACCTCCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTTACTCAAA +
Preference number: 2 (lower is better)
Translates to: WAENSCRKKPPLAVE*YLLLPLLTNPRLLK
Trigger: TTTGAGTAACCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTCTACAAGAGTTTTCTGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCATTACTAGGGGAATATaGCCTATTACTAGGGGAATA +
Preference number: 2 (lower is better)
Translates to: REWDGCGLGQKTLVERNLITRGI*PITRGI
Trigger: TATTCCCCTAGTAATAGGTCATATTCCCCTAGTAAT...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 2 (lower is better)
Translates to: LKIRREKRDTRFSLPLILRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATCTAAGAGAGAAAAATTaGCCTAAAGTGGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RAKVGPGAGISIKTEELDLREKN*PKVERS
Trigger: ACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAG...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR GCA 72 bp GGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAGCTCCAGTCGACCAGG +
Preference number: 3 (lower is better)
Translates to: GTSISQVLRSLT*FSGSWKLQSTR
Trigger: CCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCACTTGAGCTTGCCATaGGGCAGCCGGATGCCCCCA +
Preference number: 3 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGHLSLP*GSRMPP
Trigger: TGGGGGCATCCGGCTGCCCAATGGCAAGCTCAAGTG...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCGAGTCCTGGCAGCCATaGCTGGGGGATGCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVESWQP*LGDAPG
Trigger: CCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACTC...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCGCCCCAGCAGTCTGCTaGACTCCTCATCGCTGTACA +
Preference number: 3 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGAPAVC*TPHRCT
Trigger: TGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGGC...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR TCA 72 bp CTAAGAACAGGGCCCAGGAGCCCGGGAATGAGAGGGTaGATCCTGCTGGGAGGGAGCAGCAGAAGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: LRTGPRSPGMRG*ILLGGSSRRQH
Trigger: ATGCTGCCTTCTGCTGCTCCCTCCCAGCAGGATTCACCCTCTCATTCCCGGGCTCCTGGGCCCTGTTCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR GCA 72 bp ATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTaGACCCACAAAGGCCAGGGAACTTCCAAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: IGGWKAEGTQML*THKGQGTSKAR
Trigger: CCTGGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CCA 72 bp CCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCTGTaGAGTCCTGGCAGCCATTGCTGGGGGATGCCCCAG +
Preference number: 3 (lower is better)
Translates to: PQPDLRGCFLCL*SPGSHCWGMPQ
Trigger: CTGGGGCATCCCCCAGCAATGGCTGCCAGGACTCCACAGACACAGAAAGCAACCACGAAGATCGGGTTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCTCCCCAGAGTGCAGCTaGATGTGGCGCAGCAGGTTC +
Preference number: 3 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVSPECS*MWRSRF
Trigger: GAACCTGCTGCGCCACATCAAGCTGCACTCTGGGGA...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCTGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTG +
Preference number: 3 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGWGVER*RLVRLL
Trigger: CAATAGCCTCACCAAACGCAAGCGTTCCACACCCCA...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR GCA 72 bp GGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGTCCTGGCAGCCATTGC +
Preference number: 3 (lower is better)
Translates to: GGIPPPQPDLRG*FLCLWSPGSHC
Trigger: GCAATGGCTGCCAGGACTCCACAGACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCACCCCAGGGTGCCGTaGAGGATTCTTCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPHPRVP*RILPFS
Trigger: AGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGTG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCACGTCACACTTGAGCTaGCCATTGGGCAGCCGGATG +
Preference number: 3 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVTSHLS*PLGSRM
Trigger: CATCCGGCTGCCCAATGGCAAGCTCAAGTGTGACGT...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTGTACCCATCCCAGTCTaGCTGGAACAAGGGTGGAAT +
Preference number: 3 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPVPIPV*LEQGWN
Trigger: ATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTAC...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTACAGGTGCCACAGTaGACTGGGGAAGGGGATGGG +
Preference number: 3 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLQVPQ*TGEGDG
Trigger: CCCATCCCCTTCCCCAGTCAACTGTGGCACCTGTAA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCCGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAA +
Preference number: 3 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKARLVRL*ARRSMK
Trigger: TTTCATCGATCGTCTGGCCAATAGCCTCACCAAACG...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCACCCGAAGCACTTCCTaGGAGGGGCCTGGGGTGCCC +
Preference number: 3 (lower is better)
Translates to: REWDGCGLGQKTLVERNLTRSTS*EGPGVP
Trigger: GGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGGT...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR TCA 72 bp CTGGGTGTAGACAGAGCTGATGACAGGCGTGAGTTCTaGGATGCAATTGGTGGGTGGAAGGCGGAGGGGACG +
Preference number: 3 (lower is better)
Translates to: LGVDRADDRREF*DAIGGWKAEGT
Trigger: CGTCCCCTCCGCCTTCCACCCACCAATTGCATCTCAGAACTCACGCCTGTCATCAGCTCTGTCTACACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGCCAATCTGGTTCTCTaGGGGAAACCTCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSANLVL*GKPQSG
Trigger: CCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGGC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR TCA 72 bp CCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCTCATGCTGGGATAATT +
Preference number: 3 (lower is better)
Translates to: PSQSCWNKGGMG*RARARAHAGII
Trigger: AATTATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 72 bp TTCATGTTCCGGGAGGTTACAGGTGCCACAGTTGACTaGGGAAGGGGATGGGGGCACCCTAAGGCTCTGATA +
Preference number: 3 (lower is better)
Translates to: FMFREVTGATVD*GRGWGHPKALI
Trigger: TATCAGAGCCTTAGGGTGCCCCCATCCCCTTCCCCAGTCAACTGTGGCACCTGTAACCTCCCGGAACATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERPLAVE*YLLLPL
Trigger: AAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR TCA 72 bp CACCTGGTTGGCCAGCCAAAGCTTGGGCTTCAGTGCTaGGACTCTGTAGGTAGTTATGGCACCGCTCCTTGT +
Preference number: 3 (lower is better)
Translates to: HLVGQPKLGLQC*DSVGSYGTAPC
Trigger: ACAAGGAGCGGTGCCATAACTACCTACAGAGTCTCAGCACTGAAGCCCAAGCTTTGGCTGGCCAACCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR GCA 72 bp AGACGATCGATGAAAGTTGGCCGCTCAGAGGATGAGTaGAGCATGGAGTCTGGCACCATCTCCAGGTCACGT +
Preference number: 3 (lower is better)
Translates to: RRSMKVGRSEDE*SMESGTISRSR
Trigger: ACGTGACCTGGAGATGGTGCCAGACTCCATGCTGCACTCATCCTCTGAGCGGCCAACTTTCATCGATCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CCA 72 bp TCCTTTCCCATGCCCTGGTTCCCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGACAGAGGGTTGCAGAC +
Preference number: 3 (lower is better)
Translates to: SFPMPWFPIRHL*LPICQRQRVAD
Trigger: GTCTGCAACCCTCTGTCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR TCA 72 bp CACCCGAGTTCACATCATAGGGGAGGTCTGAGAGGCTaGAGCGCATCTGCTTTTCGCCTACAAACTTCTGGG +
Preference number: 3 (lower is better)
Translates to: HPSSHHRGGLRG*SASAFRLQTSG
Trigger: CCCAGAAGTTTGTAGGCGAAAAGCAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGATGTGAACTCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp CCGGTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCCTTAAAGCAAGAAGCTaGAAGTCTCTTAGTACTAAG +
Preference number: 3 (lower is better)
Translates to: PVEEGTSISQVLRSLTCFLKARS*KSLSTK
Trigger: CTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAG...GAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAAAGACCCCAGTTCAGTaGTACCCATCCCAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGKTPVQ*YPSQSC
Trigger: GCAAGACTGGGATGGGTACAACTGAACTGGGGTCTT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGAAAGAAACCTCCACTaGCAGTGGAGTTGTATCTCC +
Preference number: 3 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSERNLH*QWSCIS
Trigger: GGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTAAAACAGCCTTTGGTTaGAATCTCAAGGAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPKTAFG*NLKEAE
Trigger: CTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTTT...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGCCAATCTGGTTCTCTaGGGGAAACCTCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEANLVL*GKPQSG
Trigger: CCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGGC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGGCAGCATCTATTTATaGCTACATTGTCAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: PPLPSLAPGLALPVSALMGSIYL*LHCQGG
Trigger: TCCTCCTTGACAATGTAGCAATAAATAGATGCTGCC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGGAGGCACCACACTGGTaGCAATGGAAGGGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: VCHQLHILFIATRVHIIGEAPHW*QWKGLS
Trigger: TGAAAGGCCCTTCCATTGCAACCAGTGTGGTGCCTC...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGTGGAACGCTTGCGTTaGGTGAGGCTATTGGCCAGA +
Preference number: 3 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKVERLR*VRLLAR
Trigger: TCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCAC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR GCA 72 bp GTCAAGGAGGAACAATTGCCCCACAATGCTTCTCCCTaGCAATCTGGTTCTCTTGGGGAAACCTCAGAGTGG +
Preference number: 3 (lower is better)
Translates to: VKEEQLPHNASP*QSGSLGETSEW
Trigger: CCACTCTGAGGTTTCCCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CCA 72 bp AGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: SEGYKAKLLGKW*GQGSMPVVRAV
Trigger: CACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAAGACCCCAGTTCAGTaGTACCCATCCCAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKKTPVQ*YPSQSC
Trigger: GCAAGACTGGGATGGGTACAACTGAACTGGGGTCTT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATATTTCGTCACCTGGTaGGCCAGCCAAAGCTTGGGC +
Preference number: 3 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTYFVTW*ASQSLG
Trigger: GCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAATA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCTTAAAGCAAGAAGCTaGAAGTCTCTTAGTACTAAG +
Preference number: 3 (lower is better)
Translates to: PPLPSLAPGLALPVSALMLKARS*KSLSTK
Trigger: CTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCTTAAAGCAAGAAGCTaGAAGTCTCTTAGTACTAAG +
Preference number: 3 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPLKARS*KSLSTK
Trigger: CTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGTTGCAGACCTAGCCTaGGCCCCTGAGAATATAAAA +
Preference number: 3 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGVADLA*APENIK
Trigger: TTTTATATTCTCAGGGGCCAAGGCTAGGTCTGCAAC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR TCA 72 bp TTCATAGCCACCCGAGTTCACATCATAGGGGAGGTCTaGGAGGCTGAAGCGCATCTGCTTTTCGCCTACAAA +
Preference number: 3 (lower is better)
Translates to: FIATRVHIIGEV*EAEAHLLFAYK
Trigger: TTTGTAGGCGAAAAGCAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGATGTGAACTCGGGTGGCTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR GCA 72 bp TTGCTGGAACAAGGGTGGAATGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGATAATTTTTGGTTATAC +
Preference number: 3 (lower is better)
Translates to: LLEQGWNGVKGT*PCSCWDNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CCA 72 bp AGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATaGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: SSEGYKAKLLGK*WGQGSMPVVRA
Trigger: TGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCCTGAGAATATAAAATaGGGGCACTCCAAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKPENIK*GHSKER
Trigger: TCTCTCCTTGGAGTGCCCCAATTTTATATTCTCAGG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGTTGCAGACCTAGCCTaGGCCCCTGAGAATATAAAA +
Preference number: 3 (lower is better)
Translates to: REWDGCGLGQKTLVERNLVADLA*APENIK
Trigger: TTTTATATTCTCAGGGGCCAAGGCTAGGTCTGCAAC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR GCA 72 bp TTGCTACATTGTCAAGGAGGAACAATTGCCCCACAATaGTTCTCCCTGCCAATCTGGTTCTCTTGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: LLHCQGGTIAPQ*FSLPIWFSWGN
Trigger: GTTTCCCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGACAATGTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CCA 72 bp ATCTCAAGGAAGCAGAGAGTGGGATGGCTGTGGCCTTaGGCAGAAAACTCTTGTAGAAAGAAACCTCCACTT +
Preference number: 3 (lower is better)
Translates to: ISRKQRVGWLWP*AENSCRKKPPL
Trigger: AAGTGGAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTTCCTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGGCAGCATCTATTTATaGCTACATTGTCAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKGSIYL*LHCQGG
Trigger: TCCTCCTTGACAATGTAGCAATAAATAGATGCTGCC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACTTAAAGCAAGAAGCTaGAAGTCTCTTAGTACTAAG +
Preference number: 3 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGLKARS*KSLSTK
Trigger: CTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCTGAAAAGTAGGATTTaGTACCTAAGACCCTGGTTA +
Preference number: 3 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRLKSRI*YLRPWL
Trigger: TAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCTGTACATCTCCACCTaGATGGAGTTGGCACTGAGT +
Preference number: 3 (lower is better)
Translates to: GLLEDLREKNWPKVERSCLYIST*MELALS
Trigger: ACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCTATTTATTGCTACATaGTCAAGGAGGAACAATTGC +
Preference number: 3 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRLFIAT*SRRNNC
Trigger: GCAATTGTTCCTCCTTGACAATGTAGCAATAAATAG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CCA 72 bp AAGGCTCTGAAAAGTAGGATTTTGTACCTAAGACCCTaGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGG +
Preference number: 3 (lower is better)
Translates to: KALKSRILYLRP*LKCSDGLERDR
Trigger: CCTGTCTCTCTCCAGACCATCACTGCACTTTAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR GCA 72 bp CATCTATTTATTGCTACATTGTCAAGGAGGAACAATTaGCCCACAATGCTTCTCCCTGCCAATCTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: HLFIATLSRRNN*PTMLLPANLVL
Trigger: GAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGACAATGTAGCAATAAATAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR TCA 72 bp GATAATGTAAAGGGTGAGGACTTAAAGCAAGAAGCTTaGAGTCTCTTAGTACTAAGAGGAGCTTCCTACCCC +
Preference number: 3 (lower is better)
Translates to: DNVKGEDLKQEA*SLLVLRGASYP
Trigger: GGGGTAGGAAGCTCCTCTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAGTCCTCACCCTTTACATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR TCA 72 bp TATCACATCCTAGAGGGAGATCCTGAATGTAGGCTTTaGGAACTCATATTACTAGGGGAATATGACCTATTA +
Preference number: 3 (lower is better)
Translates to: YHILEGDPECRL*ELILLGEYDLL
Trigger: TAATAGGTCATATTCCCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGGATCTCCCTCTAGGATGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCGGTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCGCAGCAGCGGCACGGTaGGCAGAGGCCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVEEGTSISQVLRSLTCFAAAAR*AEAHGC
Trigger: GCAGCCGTGGGCCTCTGCTCACCGTGCCGCTGCTGC...GAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTGCAGCAGCGGCACGGTaGGCAGAGGCCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPAAAAR*AEAHGC
Trigger: GCAGCCGTGGGCCTCTGCTCACCGTGCCGCTGCTGC...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR GCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPGETLG*ERGRRL
Trigger: AAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACC...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGATGCCCCCAGGGGAGTaGGGCTCTGGCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMMPPGE*GSGPLP
Trigger: TGGGAGTGGGCCAGAGCCTCACTCCCCTGGGGGCAT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CCGGTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCCCGGGAATGAGAGGGTaGATCCTGCTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVEEGTSISQVLRSLTCFPGMRG*ILLGGS
Trigger: GCTCCCTCCCAGCAGGATTCACCCTCTCATTCCCGG...GAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGCTGGCTGTTGGGGGTaGTCACCGAGGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMAGCWG*SPRAPL
Trigger: CAGTGGGGCCCTCGGTGAGCACCCCCAACAGCCAGC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCACCGAGGGCCCCACTaGGGCCCCGAGGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPHRGPH*GPEELL
Trigger: AAGGAGTTCCTCGGGGCCCCAGTGGGGCCCTCGGTG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERLPVRP*GANAAA
Trigger: GGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKAGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGCTGGCTGTTGGGGGTaGTCACCGAGGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERAGCWG*SPRAPL
Trigger: CAGTGGGGCCCTCGGTGAGCACCCCCAACAGCCAGC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGCGGAGGGGACGCAGATaGTCTGCACCCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLERRGRR*SAPTKA
Trigger: GGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCG...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGAGTCCTGGCAGCCATTaGTGGGGGATGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMSPGSH*WGMPQG
Trigger: ACCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGAGCACGCTTGGATGTaGTTGGGGAGGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMEHAWM*LGRGLE
Trigger: CTCCAGCCCCCTCCCCAAGCACATCCAAGCGTGCTC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCACCGAGGGCCCCACTaGGGCCCCGAGGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDHRGPH*GPEELL
Trigger: AAGGAGTTCCTCGGGGCCCCAGTGGGGCCCTCGGTG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCGGAGTTGGCACTGAGTaGGCGGCTAGGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKAGVGTE*AARRRV
Trigger: CACTCTTCTCCTAGCCGCTCACTCAGTGCCAACTCC...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCTGGCCCCAGCAGTCTaGTTGACTCCTCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGLAPAV*LTPHRC
Trigger: ACAGCGATGAGGAGTCAAGCAGACTGCTGGGGCCAG...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGGGACGCAGATGCTCTaGACCCACAAAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMGTQML*THKGQG
Trigger: TCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGATGTCTGCGTCTCAGTaGCAGGCAGGGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMMSASQ*QAGVSP
Trigger: TGGGCTCACCCCTGCCTGCCACTGAGACGCAGACAT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGATTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGLPVRP*GANAAA
Trigger: GGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAA...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCCTGGCAGCCATTGCTaGGGGATGCCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSPGSHC*GMPQGQ
Trigger: CTGACCCTGGGGCATCCCCCAGCAATGGCTGCCAGG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CCTCACCTGCTTCTCGGGATCCTGGAAGCTCCAGTCGACCAGGGAGGGGCTGCACTCCTACCCTGTGTCTaGGAGCTGAGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PHLLLGILEAPVDQGGAALLPCV*ELSVEG
Trigger: CCCTTCTACACTCAGCTCCCAGACACAGGGTAGGAG...TGCAGCCCCTCCCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGGCCTTTCACCAGTGTaGCTGCGCTTGTGCACCATG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMGLSPV*LRLCTM
Trigger: CATGGTGCACAAGCGCAGTCACACTGGTGAAAGGCC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATGCGGAGGTGACCAGTaGGTGCATCACGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGCGGDQ*VHHAGG
Trigger: GCCGCCGGCGTGATGCACTCACTGGTCACCTCCGCA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTGGCCAGACGATCGATaGAAGTTGGCCGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMWPDDR*KLAAQR
Trigger: CCTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CCGGTAGAGGAGGGGACCTCCATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCAACGCTTGCGTTTGGTaGGGCTATTGGCCAGACGAT +
Preference number: 4 (lower is better)
Translates to: PVEEGTSISQVLRSLTCFNACVW*GYWPDD
Trigger: ATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTT...GAAGCAGGTGAGGGACCTGAGGACCTGGCTGATGGAGGTCCCCTCCTCTACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGGAGGTCTGAGAGGCTaGAGCGCATCTGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMGGLRG*SASAFR
Trigger: GCGAAAAGCAGATGCGCTTCAGCCTCTCAGACCTCC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCCAGGAGCCCGGGAATaGGAGGGTGAATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDPGARE*EGESCW
Trigger: CCAGCAGGATTCACCCTCTCATTCCCGGGCTCCTGG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCTTTTCCAAGACAGTaGAGGGGGTGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPFPRQ*RGWVVG
Trigger: ACCCACCACCCACCCCCTTCACTGTCTTGGAAAAGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR GCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTGAAACGGCGAGGGAGTaGGGGTGGTGTATGCATGTC +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPETARE*GWCMHV
Trigger: GACATGCATACACCACCCGCACTCCCTCGCCGTTTC...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGGETLG*ERGRRL
Trigger: AAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACC...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCGCTCAGAGGATGAGTaGAGCATGGAGTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPRSEDE*SMESGT
Trigger: GGTGCCAGACTCCATGCTGCACTCATCCTCTGAGCG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMLRSLT*FSGSWK
Trigger: CTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTATAGCCAAGGGTCTCTaGAGTAGCCAGCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPIAKGL*SSQQSP
Trigger: GGGGGACTGCTGGCTACTGCAGAGACCCTTGGCTAT...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGAAAGGCAGATGCTGTTaGCCCTCGTGCCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLEKGRCC*PSCPAD
Trigger: GTCTGCTGGGCACGAGGGGCAACAGCATCTGCCTTT...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGACGCGGCCGCCGCCTTaGAAACGGCGAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKTRPPP*KRRGSA
Trigger: CGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKLPVRP*GANAAA
Trigger: GGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGTTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSELPVRP*GANAAA
Trigger: GGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAA...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACACCGAGGGCCCCACTaGGGCCCCGAGGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGHRGPH*GPEELL
Trigger: AAGGAGTTCCTCGGGGCCCCAGTGGGGCCCTCGGTG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCCAGGCTCTAGGCTGTaGTGTGCCACCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPPGSRL*CATNST
Trigger: TGTGGAGTTGGTGGCACACCACAGCCTAGAGCCTGG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGTGTCTGTGGAGTCCTaGCAGCCATTGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMVSVES*QPLLGD
Trigger: ATCCCCCAGCAATGGCTGCCAGGACTCCACAGACAC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATCCTTCCCTTGCCGGTaGGACCCTGGGGTGCGAACG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGSFPCR*DPGVRT
Trigger: CGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGATGCCCCCAGGGGAGTaGGGCTCTGGCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSEMPPGE*GSGPLP
Trigger: TGGGAGTGGGCCAGAGCCTCACTCCCCTGGGGGCAT...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTGCGGAGGTGACCAGTaGGTGCATCACGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNECGGDQ*VHHAGG
Trigger: GCCGCCGGCGTGATGCACTCACTGGTCACCTCCGCA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGCGGAGGTGACCAGTaGGTGCATCACGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKCGGDQ*VHHAGG
Trigger: GCCGCCGGCGTGATGCACTCACTGGTCACCTCCGCA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGAGTGTGTGCGGAGGTaGCCAGTGAGTGCATCACGC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERECVRR*PVSASR
Trigger: GCGTGATGCACTCACTGGTCACCTCCGCACACACTC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATGTGGGAGAGGAGACTaGGTGTGTGCGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERCGRGD*VCAEVT
Trigger: GGTCACCTCCGCACACACTCAGTCTCCTCTCCCACA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTGTGGGAGAGGAGACTaGGTGTGTGCGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSCGRGD*VCAEVT
Trigger: GGTCACCTCCGCACACACTCAGTCTCCTCTCCCACA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGGCCGCTCAGAGGATaGGTGCAGCATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDWPLRG*VQHGVW
Trigger: CCAGACTCCATGCTGCACTCATCCTCTGAGCGGCCA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCTGGCCAGACGATCGATaGAAGTTGGCCGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVWPDDR*KLAAQR
Trigger: CCTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCA...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGATCATAGGGGAGGTCTaGGAGGCTGAAGCGCATCTG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMIIGEV*EAEAHL
Trigger: CAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGAT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCCCTTTTCCAAGACAGTaGAGGGGGTGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVPFPRQ*RGWVVG
Trigger: ACCCACCACCCACCCCCTTCACTGTCTTGGAAAAGG...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTGTGGATTCCTGGAAGTaGGGGGAACCGCCGTCATTT +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPVDSWK*GEPPSF
Trigger: AAATGACGGCGGTTCCCCTCACTTCCAGGAATCCAC...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR GCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGCTGGCTGTTGGGGGTaGTCACCGAGGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGAGCWG*SPRAPL
Trigger: CAGTGGGGCCCTCGGTGAGCACCCCCAACAGCCAGC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGAGGTGACCAGTGAGTaGATCACGCCGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGEVTSE*ITPAAG
Trigger: GCCTGCCGCCGGCGTGATGCACTCACTGGTCACCTC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATGGCACCGCTCCTTGTaGTCCTCCAGGGTACTCTGC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERWHRSL*SSRVLC
Trigger: GCAGAGTACCCTGGAGGAGCACAAGGAGCGGTGCCA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGGGACGCAGATGCTCTaGACCCACAAAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERGTQML*THKGQG
Trigger: TCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGGGACGCAGATGCTCTaGACCCACAAAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDGTQML*THKGQG
Trigger: TCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTGCTGTTGCCCCTCGTaGCCAGCAGACAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMCCCPS*PADKEE
Trigger: TTCCTCTTTGTCTGCTGGGCACGAGGGGCAACAGCA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCATGTCTGCGTCTCAGTaGCAGGCAGGGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSMSASQ*QAGVSP
Trigger: TGGGCTCACCCCTGCCTGCCACTGAGACGCAGACAT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TTGAAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGCCAGGCTCTAGGCTGTaGTGTGCCACCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: LKAFTGSPLSPTTRSTSLPGSRL*CATNST
Trigger: TGTGGAGTTGGTGGCACACCACAGCCTAGAGCCTGG...CAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGTTCTGAGATGCAATTaGTGGGTGGAAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMVLRCN*WVEGGG
Trigger: CCCTCCGCCTTCCACCCACCAATTGCATCTCAGAAC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGGTTCTGAGATGCAATTaGTGGGTGGAAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLEVLRCN*WVEGGG
Trigger: CCCTCCGCCTTCCACCCACCAATTGCATCTCAGAAC...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGGCCCACCACAATGGTaGGAGGTGGCTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKGPPQW*EVAGVG
Trigger: CCCCACCCCAGCCACCTCCCACCATTGTGGTGGGCC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGCTTGGGGTCCTCTTTaGCGTAGGCAGGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERAWGPL*RRQDCA
Trigger: GGCACAGTCCTGCCTACGCCAAAGAGGACCCCAAGC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGCTTGGGGTCCTCTTTaGCGTAGGCAGGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDAWGPL*RRQDCA
Trigger: GGCACAGTCCTGCCTACGCCAAAGAGGACCCCAAGC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACCCGAAGCACTTCCTTaGAGGGGCCTGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGPEALP*RGLGCP
Trigger: GGGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CCTCACCTGCTTCTCGGGATCCTGGAAGCTCCAGTCGACCAGGGAGGGGCTGCAAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 4 (lower is better)
Translates to: PHLLLGILEAPVDQGGAARRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...TGCAGCCCCTCCCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGTTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLELLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCGGAACACACCCTCCTaGGGGATCCCTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSRNTPS*GIPLQI
Trigger: AATCTGGAGAGGGATCCCTCAGGAGGGTGTGTTCCG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGGCCTTTCACCAGTGTaGCTGCGCTTGTGCACCATG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDGLSPV*LRLCTM
Trigger: CATGGTGCACAAGCGCAGTCACACTGGTGAAAGGCC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGGCCAGACGATCGATaGAAGTTGGCCGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDWPDDR*KLAAQR
Trigger: CCTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGGAGGTCTGAGAGGCTaGAGCGCATCTGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERGGLRG*SASAFR
Trigger: GCGAAAAGCAGATGCGCTTCAGCCTCTCAGACCTCC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGAGGAAGAGAATAGGTaGGGAGGGGTCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEEREEENR*GGVRVR
Trigger: CCTGACCCTGACCCCTCCTCACCTATTCTCTTCCTC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TTGAAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGAGAAGGCAGCATGACTaGGGGGCTGAAACAACCCCT +
Preference number: 4 (lower is better)
Translates to: LKAFTGSPLSPTTRSTSLRRQHD*GAETTP
Trigger: AGGGGTTGTTTCAGCCCCTCAGTCATGCTGCCTTCT...CAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACCAGGAGCCCGGGAATaGGAGGGTGAATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGPGARE*EGESCW
Trigger: CCAGCAGGATTCACCCTCTCATTCCCGGGCTCCTGG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGKGGMG*RARARA
Trigger: AGCACGGGCACGTGCCCTTCACCCCATTCCACCCTT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TTGAAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGTGGTGTATGCATGTCTaGGTCTCAGTGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKAFTGSPLSPTTRSTSLWCMHV*VSVAGR
Trigger: CCTGCCTGCCACTGAGACGCAGACATGCATACACCA...CAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGAAACGGCGAGGGAGTaGGGGTGGTGTATGCATGTC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERETARE*GWCMHV
Trigger: GACATGCATACACCACCCGCACTCCCTCGCCGTTTC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCTGGCCCCAGCAGTCTaGTTGACTCCTCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLAPAV*LTPHRC
Trigger: ACAGCGATGAGGAGTCAAGCAGACTGCTGGGGCCAG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGGAGGTGACCAGTGAGTaGATCACGCCGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSEEVTSE*ITPAAG
Trigger: GCCTGCCGCCGGCGTGATGCACTCACTGGTCACCTC...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACGCTCAGAGGATGAGTaGAGCATGGAGTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERRSEDE*SMESGT
Trigger: GGTGCCAGACTCCATGCTGCACTCATCCTCTGAGCG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGACGGAGGGGACGCAGATaGTCTGCACCCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGRRGRR*SAPTKA
Trigger: GGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCG...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAGTCCTGGCAGCCATTaGTGGGGGATGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGSPGSH*WGMPQG
Trigger: ACCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAACGCGGCCGCCGCCTTaGAAACGGCGAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKTRPPP*KRRGSA
Trigger: CGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACACCGAGGGCCCCACTaGGGCCCCGAGGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTHRGPH*GPEELL
Trigger: AAGGAGTTCCTCGGGGCCCCAGTGGGGCCCTCGGTG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCAGGGGAGTGAGGCTCTaGCCCACTCCCATCACAGTA +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSRGVRL*PTPITV
Trigger: TACTGTGATGGGAGTGGGCCAGAGCCTCACTCCCCT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACAGGGCTTGCCCACTGTaGGAGAGGAGACTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDRACPL*ERRLSV
Trigger: CACACTCAGTCTCCTCTCCCACAGTGGGCAAGCCCT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTCGCCTACAAACTTCTaGGGTGTGGAACGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMSPTNF*GVERLR
Trigger: ACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGCCTGGCAGCCATTGCTaGGGGATGCCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSEPGSHC*GMPQGQ
Trigger: CTGACCCTGGGGCATCCCCCAGCAATGGCTGCCAGG...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGTGTCTGTGGAGTCCTaGCAGCCATTGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDVSVES*QPLLGD
Trigger: ATCCCCCAGCAATGGCTGCCAGGACTCCACAGACAC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGGCCCACCACAATGGTaGGAGGTGGCTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLGPPQW*EVAGVG
Trigger: CCCCACCCCAGCCACCTCCCACCATTGTGGTGGGCC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMSFPMP*FPIRHL
Trigger: CAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCCAATCTGGTTCTCTTaGGGAAACCTCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPPIWFS*GNLRVG
Trigger: CCCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACCCCAGCAGTCTGCTTaGCTCCTCATCGCTGTACAT +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERPQQSA*LLIAVH
Trigger: ATGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCAGGGGCTCAGACAATaGATCTTCCACAATCACGCT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMQGLRQ*IFHNHA
Trigger: AGCGTGATTGTGGAAGATTCATTGTCTGAGCCCCTG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACGCAGACGTCACACTTaGGCTTGCCATTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGRRRHT*ACHWAA
Trigger: GGCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGACGCAGACGTCACACTTaGGCTTGCCATTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGRRRHT*ACHWAA
Trigger: GGCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCG...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGCGCTTGTGCACCATaGGCACGTTGGGTCCAATAC +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDCACAP*ARWVQY
Trigger: GTATTGGACCCAACGTGCTCATGGTGCACAAGCGCA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACCCCAGAGTGCAGCTTaGTGTGGCGCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGPQSAA*CGAAGS
Trigger: GGAACCTGCTGCGCCACATCAAGCTGCACTCTGGGG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCCCCAGAGTGCAGCTTaGTGTGGCGCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRPQSAA*CGAAGS
Trigger: GGAACCTGCTGCGCCACATCAAGCTGCACTCTGGGG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACCCCAGAGTGCAGCTTaGTGTGGCGCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKPQSAA*CGAAGS
Trigger: GGAACCTGCTGCGCCACATCAAGCTGCACTCTGGGG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCATCATAGGGGAGGTCTaGGAGGCTGAAGCGCATCTG +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSIIGEV*EAEAHL
Trigger: CAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGAT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCCGGGAATGAGAGGGTaGATCCTGCTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEPGMRG*ILLGGS
Trigger: GCTCCCTCCCAGCAGGATTCACCCTCTCATTCCCGG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGAAGGGTGGAATGGGGTaGAGGGCACGTGCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGKGGMG*RARARA
Trigger: AGCACGGGCACGTGCCCTTCACCCCATTCCACCCTT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTGGTGTATGCATGTCTaGGTCTCAGTGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSWCMHV*VSVAGR
Trigger: CCTGCCTGCCACTGAGACGCAGACATGCATACACCA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGCTGGCTGTTGGGGGTaGTCACCGAGGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKAGCWG*SPRAPL
Trigger: CAGTGGGGCCCTCGGTGAGCACCCCCAACAGCCAGC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAGAGGTGACCAGTGAGTaGATCACGCCGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTEVTSE*ITPAAG
Trigger: GCCTGCCGCCGGCGTGATGCACTCACTGGTCACCTC...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGATGGCACCGCTCCTTGTaGTCCTCCAGGGTACTCTGC +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGWHRSL*SSRVLC
Trigger: GCAGAGTACCCTGGAGGAGCACAAGGAGCGGTGCCA...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCGGAGGGGACGCAGATaGTCTGCACCCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKRRGRR*SAPTKA
Trigger: GGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGAGTCCTGGCAGCCATTaGTGGGGGATGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRSPGSH*WGMPQG
Trigger: ACCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAGTCCTGGCAGCCATTaGTGGGGGATGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKSPGSH*WGMPQG
Trigger: ACCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGAAGGGCACGTGCCCGTaGTCATGCTGGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMKGTCP*SCWDNF
Trigger: AAAATTATCCCAGCATGAGCACGGGCACGTGCCCTT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp ATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCTCGGGATCCTGGAAGCTCCAGTACCCATCCCAGTCTTaGTGGAACAAGGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: ISQVLRSLTCFSGSWKLQYPSQS*WNKGGM
Trigger: CATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTA...CTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAGGACCTGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTACCTTCCAGGAAGCGTaGATTCCTTACATTACCCGG +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPTFQEA*IPYITR
Trigger: CCGGGTAATGTAAGGAATCCACGCTTCCTGGAAGGT...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262032.9
ENST00000431367.6
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGCGAGGGAGTGCGGGTaGTGTATGCATGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGARECG*CMHVCV
Trigger: GACGCAGACATGCATACACCACCCGCACTCCCTCGC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATGGCCAGCCAAAGCTTaGGCTTCAGTGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERWPAKA*ASVLRL
Trigger: GAGTCTCAGCACTGAAGCCCAAGCTTTGGCTGGCCA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGGCCAGCCAAAGCTTaGGCTTCAGTGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDWPAKA*ASVLRL
Trigger: GAGTCTCAGCACTGAAGCCCAAGCTTTGGCTGGCCA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCATTTCGTCACCTGGTTaGCCAGCCAAAGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVISSPG*PAKAWA
Trigger: AGCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAAT...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGACGTATTTCGTCACCTaGTTGGCCAGCCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMTYFVT*LASQSL
Trigger: CAAGCTTTGGCTGGCCAACCAGGTGACGAAATACGT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTACGTATTTCGTCACCTaGTTGGCCAGCCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPTYFVT*LASQSL
Trigger: CAAGCTTTGGCTGGCCAACCAGGTGACGAAATACGT...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCCTGGCAGCCATTGCTaGGGGATGCCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLPGSHC*GMPQGQ
Trigger: CTGACCCTGGGGCATCCCCCAGCAATGGCTGCCAGG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGGCCCACCACAATGGTaGGAGGTGGCTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKGPPQW*EVAGVG
Trigger: CCCCACCCCAGCCACCTCCCACCATTGTGGTGGGCC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACCCCTCCTGTGGCTTaGGGTCCTCTTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGTPPVA*GPLWRR
Trigger: CCTACGCCAAAGAGGACCCCAAGCCACAGGAGGGGT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCCGAAGCACTTCCTTaGAGGGGCCTGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKPEALP*RGLGCP
Trigger: GGGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGTCAGGGCAGTGGAGTaGTGGACTGAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGVRAVE*WTEERG
Trigger: CCCTCTCTCCTCAGTCCACCACTCCACTGCCCTGAC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCCTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCT +
Preference number: 4 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVLLGKW*GQGSMP
Trigger: AGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAG...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 4 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCCATCCCAGTCTTGCTaGAACAAGGGTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSPSQSC*NKGGMG
Trigger: CCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCCATCCCAGTCTTGCTaGAACAAGGGTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDPSQSC*NKGGMG
Trigger: CCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGGGATGGCTGTGGCCTTaGGCAGAAAACTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLEGWLWP*AENSCR
Trigger: TCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCC...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAGGGGAGAGCACGCTTaGATGTGCTTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKRGEHA*MCLGRG
Trigger: CCCCCTCCCCAAGCACATCCAAGCGTGCTCTCCCCT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAGGGGAGAGCACGCTTaGATGTGCTTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKRGEHA*MCLGRG
Trigger: CCCCCTCCCCAAGCACATCCAAGCGTGCTCTCCCCT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
3UTR CAA 72 bp ACAGAGCTGATGACAGGCGTGAGTTCTGAGATGCAATaGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: TELMTGVSSEMQ*VGGRRRGRRCS
Trigger: AGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGCATCTCAGAACTCACGCCTGTCATCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCCCGGGTGTTGCCAATaGCTCTCATATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDPGCCQ*LSYVCL
Trigger: CAGACACACATATGAGAGTCATTGGCAACACCCGGG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262032.9
ENST00000431367.6
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGGAGTTGGCACTGAGTaGGCGGCTAGGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGGVGTE*AARRRV
Trigger: CACTCTTCTCCTAGCCGCTCACTCAGTGCCAACTCC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTGAGGGAGGGATACCACCCCCGCAACCCGATCTTCGTGGTTGCTTTCTGTGTCCAGGGGCTCAGACAATaGATCTTCCACAATCACGCT +
Preference number: 4 (lower is better)
Translates to: LREGYHPRNPIFVVAFCVQGLRQ*IFHNHA
Trigger: AGCGTGATTGTGGAAGATTCATTGTCTGAGCCCCTG...GACACAGAAAGCAACCACGAAGATCGGGTTGCGGGGGTGGTATCCCTCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGTGTGGGAGAGGAGACTaGGTGTGTGCGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSECGRGD*VCAEVT
Trigger: GGTCACCTCCGCACACACTCAGTCTCCTCTCCCACA...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGTGGCCGCTCAGAGGATaGGTGCAGCATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGWPLRG*VQHGVW
Trigger: CCAGACTCCATGCTGCACTCATCCTCTGAGCGGCCA...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTGGCCGCTCAGAGGATaGGTGCAGCATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRWPLRG*VQHGVW
Trigger: CCAGACTCCATGCTGCACTCATCCTCTGAGCGGCCA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACAACGCTTGCGTTTGGTaGGGCTATTGGCCAGACGAT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDNACVW*GYWPDD
Trigger: ATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCCAGGAGCCCGGGAATaGGAGGGTGAATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLPGARE*EGESCW
Trigger: CCAGCAGGATTCACCCTCTCATTCCCGGGCTCCTGG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAACCCCAGGGTGCCGTTaGGGATTCTTCCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERTPGCR*GFFLSL
Trigger: TAGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCGETLG*ERGRRL
Trigger: AAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCGGCTAGGAGAAGAGTaGTGGCTGTTGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRRLGEE*WLLGVL
Trigger: GAGCACCCCCAACAGCCAGCACTCTTCTCCTAGCCG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGCGGCTAGGAGAAGAGTaGTGGCTGTTGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VCHQLHILFIATRVHIIGRLGEE*WLLGVL
Trigger: GAGCACCCCCAACAGCCAGCACTCTTCTCCTAGCCG...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGACTGGCCCCAGCAGTCTaGTTGACTCCTCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGLAPAV*LTPHRC
Trigger: ACAGCGATGAGGAGTCAAGCAGACTGCTGGGGCCAG...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGAGGTGACCAGTGAGTaGATCACGCCGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKEVTSE*ITPAAG
Trigger: GCCTGCCGCCGGCGTGATGCACTCACTGGTCACCTC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGAGGCTGAAGCGCATCTaGTTTTCGCCTACAAACTTC +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMRLKRI*FSPTNF
Trigger: GAAGTTTGTAGGCGAAAAGCAGATGCGCTTCAGCCT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGLRSLT*FSGSWK
Trigger: CTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGACTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGLRSLT*FSGSWK
Trigger: CTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAG...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGSETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTGGGTGGTGGGTGTGTaGACAGGGAGGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEWVVGV*TGRERQ
Trigger: CTGCCTTTCCCTCCCTGTGCACACACCCACCACCCA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGGGTGGTGGGTGTGTaGACAGGGAGGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKWVVGV*TGRERQ
Trigger: CTGCCTTTCCCTCCCTGTGCACACACCCACCACCCA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAGAGCACGCTTGGATGTaGTTGGGGAGGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTEHAWM*LGRGLE
Trigger: CTCCAGCCCCCTCCCCAAGCACATCCAAGCGTGCTC...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGATGTCTGCGTCTCAGTaGCAGGCAGGGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VCHQLHILFIATRVHIIGMSASQ*QAGVSP
Trigger: TGGGCTCACCCCTGCCTGCCACTGAGACGCAGACAT...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGCGAGGGAGTGCGGGTaGTGTATGCATGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRARECG*CMHVCV
Trigger: GACGCAGACATGCATACACCACCCGCACTCCCTCGC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGCGAGGGAGTGCGGGTaGTGTATGCATGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKARECG*CMHVCV
Trigger: GACGCAGACATGCATACACCACCCGCACTCCCTCGC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAGGATGAGTGCAGCATaGAGTCTGGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERRMSAA*SLAPSP
Trigger: TGGAGATGGTGCCAGACTCCATGCTGCACTCATCCT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGTGTCTGTGGAGTCCTaGCAGCCATTGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGVSVES*QPLLGD
Trigger: ATCCCCCAGCAATGGCTGCCAGGACTCCACAGACAC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGCTTTCTGTGTCTGTaGAGTCCTGGCAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDCFLCL*SPGSHC
Trigger: GCAATGGCTGCCAGGACTCCACAGACACAGAAAGCA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGCTTGGGGTCCTCTTTaGCGTAGGCAGGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGAWGPL*RRQDCA
Trigger: GGCACAGTCCTGCCTACGCCAAAGAGGACCCCAAGC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGTCAGGGCAGTGGAGTaGTGGACTGAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGVRAVE*WTEERG
Trigger: CCCTCTCTCCTCAGTCCACCACTCCACTGCCCTGAC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGTCAGGGCAGTGGAGTaGTGGACTGAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEVRAVE*WTEERG
Trigger: CCCTCTCTCCTCAGTCCACCACTCCACTGCCCTGAC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCT +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLLGKW*GQGSMP
Trigger: AGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGAGGGTGAATCCTGCTaGGAGGGAGCAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKEGESC*EGAAEG
Trigger: GCCTTCTGCTGCTCCCTCCCAGCAGGATTCACCCTC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGAGGGTGAATCCTGCTaGGAGGGAGCAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEEGESC*EGAAEG
Trigger: GCCTTCTGCTGCTCCCTCCCAGCAGGATTCACCCTC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAGAGTGGGATGGCTGTaGCCTTGGGCAGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERRVGWL*PWAENS
Trigger: AGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGAGGGAGAAGAGAGGTaGTATTGCACTTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMEGEER*YCTCFC
Trigger: ACAGAAGCAAGTGCAATACCACCTCTCTTCTCCCTC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CAA 72 bp AAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTaGCTGGAACAAGGGTGGAATGGGGTGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: KEDPSSVVPIPV*LEQGWNGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CAA 72 bp TTCTGGGGTGTGGAACGCTTGCGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAAGTTGGCCGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FWGVERLRLVRL*ARRSMKVGRSE
Trigger: CTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCACACCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACGGAACACACCCTCCTaGGGGATCCCTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKRNTPS*GIPLQI
Trigger: AATCTGGAGAGGGATCCCTCAGGAGGGTGTGTTCCG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGCGGAACACACCCTCCTaGGGGATCCCTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGRNTPS*GIPLQI
Trigger: AATCTGGAGAGGGATCCCTCAGGAGGGTGTGTTCCG...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGGCCTTTCACCAGTGTaGCTGCGCTTGTGCACCATG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEGLSPV*LRLCTM
Trigger: CATGGTGCACAAGCGCAGTCACACTGGTGAAAGGCC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATGTGGGAGAGGAGACTaGGTGTGTGCGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTCGRGD*VCAEVT
Trigger: GGTCACCTCCGCACACACTCAGTCTCCTCTCCCACA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAATCATAGGGGAGGTCTaGGAGGCTGAAGCGCATCTG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGIIGEV*EAEAHL
Trigger: CAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGAT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAATCATAGGGGAGGTCTaGGAGGCTGAAGCGCATCTG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGIIGEV*EAEAHL
Trigger: CAGATGCGCTTCAGCCTCTCAGACCTCCCCTATGAT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGGCAGTGCTCACACTTaGAGGCCTTCACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEGSAHT*RPSQAH
Trigger: GTGAGCCTGTGAAGGCCTTCAAGTGTGAGCACTGCC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGGCAGTGCTCACACTTaGAGGCCTTCACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRGSAHT*RPSQAH
Trigger: GTGAGCCTGTGAAGGCCTTCAAGTGTGAGCACTGCC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGAGGAAGAGAATAGGTaGGGAGGGGTCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEEEENR*GGVRVR
Trigger: CCTGACCCTGACCCCTCCTCACCTATTCTCTTCCTC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGAGGAAGAGAATAGGTaGGGAGGGGTCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKEEENR*GGVRVR
Trigger: CCTGACCCTGACCCCTCCTCACCTATTCTCTTCCTC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCCCTGAATGTAGGCTTTaGGAACTCATATTACTAGGG +
Preference number: 4 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKAPECRL*ELILLG
Trigger: CCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGG...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp GCAATTGGTGGGTGGAAGGCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCTATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AIGGWKAEGTQMLCTHKGYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...GCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGCCTTCCACCCACCAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGAGACTACTCTGCTCTaGGCTAACCTCCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSETTLL*ANLPIF
Trigger: GAAAATGGGGAGGTTAGCTCAGAGCAGAGTAGTCTC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGAAACGGCGAGGGAGTaGGGGTGGTGTATGCATGTC +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGETARE*GWCMHV
Trigger: GACATGCATACACCACCCGCACTCCCTCGCCGTTTC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACGGCTAGGAGAAGAGTaGTGGCTGTTGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTRLGEE*WLLGVL
Trigger: GAGCACCCCCAACAGCCAGCACTCTTCTCCTAGCCG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCTGGCCCCAGCAGTCTaGTTGACTCCTCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNELAPAV*LTPHRC
Trigger: ACAGCGATGAGGAGTCAAGCAGACTGCTGGGGCCAG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACGCTCAGAGGATGAGTaGAGCATGGAGTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKRSEDE*SMESGT
Trigger: GGTGCCAGACTCCATGCTGCACTCATCCTCTGAGCG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKSETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGGGGTGAAGGGCACGTaGCCGTGCTCATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDGVKGT*PCSCWD
Trigger: ATCCCAGCATGAGCACGGGCACGTGCCCTTCACCCC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTACCCATCCCAGTCTTaGTGGAACAAGGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDYPSQS*WNKGGM
Trigger: CATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATACCCATCCCAGTCTTaGTGGAACAAGGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERYPSQS*WNKGGM
Trigger: CATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTACCCATCCCAGTCTTaGTGGAACAAGGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSYPSQS*WNKGGM
Trigger: CATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGATAGCCAAGGGTCTCTaGAGTAGCCAGCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VCHQLHILFIATRVHIIGIAKGL*SSQQSP
Trigger: GGGGGACTGCTGGCTACTGCAGAGACCCTTGGCTAT...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAAAGGCAGATGCTGTTaGCCCTCGTGCCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGKGRCC*PSCPAD
Trigger: GTCTGCTGGGCACGAGGGGCAACAGCATCTGCCTTT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAGCGAGGGAGTGCGGGTaGTGTATGCATGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTARECG*CMHVCV
Trigger: GACGCAGACATGCATACACCACCCGCACTCCCTCGC...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAACGCGGCCGCCGCCTTaGAAACGGCGAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILTRPPP*KRRGSA
Trigger: CGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGAGGGGAGTGAGGCTCTaGCCCACTCCCATCACAGTA +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGRGVRL*PTPITV
Trigger: TACTGTGATGGGAGTGGGCCAGAGCCTCACTCCCCT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAGGGCTTGCCCACTGTaGGAGAGGAGACTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKRACPL*ERRLSV
Trigger: CACACTCAGTCTCCTCTCCCACAGTGGGCAAGCCCT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCCAGGCTCTAGGCTGTaGTGTGCCACCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEPGSRL*CATNST
Trigger: TGTGGAGTTGGTGGCACACCACAGCCTAGAGCCTGG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACCAGGCTCTAGGCTGTaGTGTGCCACCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKPGSRL*CATNST
Trigger: TGTGGAGTTGGTGGCACACCACAGCCTAGAGCCTGG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGTTCTGAGATGCAATTaGTGGGTGGAAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGVLRCN*WVEGGG
Trigger: CCCTCCGCCTTCCACCCACCAATTGCATCTCAGAAC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTGCTTCTCGGGATCCTaGAAGCTCCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRCFSGS*KLQSTR
Trigger: CCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGCAACCCGATCTTCGTaGTTGCTTTCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDATRSS*LLSVSV
Trigger: CACAGACACAGAAAGCAACCACGAAGATCGGGTTGC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAGTGGAAAGGAGTTGTaGACAGGAGGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGSGKEL*TGGWGS
Trigger: ACTCCCCCACCCTCCTGTCCACAACTCCTTTCCACT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGATTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGLLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACTCCTACCCTGTGTCTaGGAGCTGAGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGLLPCV*ELSVEG
Trigger: CCCTTCTACACTCAGCTCCCAGACACAGGGTAGGAG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGGATGGCTGTGGCCTTaGGCAGAAAACTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDGWLWP*AENSCR
Trigger: TCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCCCCTCCTTAGCACCTaGTCTTGCCCTTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKPLLST*SCPSSL
Trigger: GAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACCCCTCCTTAGCACCTaGTCTTGCCCTTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGPLLST*SCPSSL
Trigger: GAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGCTTGGGGAGGGGGCTaGAGAGAATGTATATGTGTA +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERAWGGG*RECICV
Trigger: TACACATATACATTCTCTCCAGCCCCCTCCCCAAGC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTTCCTTCCCTTGCCGGTaGGACCCTGGGGTGCGAACG +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCSFPCR*DPGVRT
Trigger: CGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGA...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACCCCAGCAGTCTGCTTaGCTCCTCATCGCTGTACAT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKPQQSA*LLIAVH
Trigger: ATGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAATGCCCCCAGGGGAGTaGGGCTCTGGCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILMPPGE*GSGPLP
Trigger: TGGGAGTGGGCCAGAGCCTCACTCCCCTGGGGGCAT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATCGCAGACGTCACACTTaGGCTTGCCATTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDRRRHT*ACHWAA
Trigger: GGCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCG...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGCGCTTGTGCACCATaGGCACGTTGGGTCCAATAC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKCACAP*ARWVQY
Trigger: GTATTGGACCCAACGTGCTCATGGTGCACAAGCGCA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGGCCTTTCACCAGTGTaGCTGCGCTTGTGCACCATG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLGLSPV*LRLCTM
Trigger: CATGGTGCACAAGCGCAGTCACACTGGTGAAAGGCC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCTTGGGCTTCAGTGCTaGGACTCTGTAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLGLQC*DSVGSY
Trigger: ATAACTACCTACAGAGTCTCAGCACTGAAGCCCAAG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAACGCTTGCGTTTGGTaGGGCTATTGGCCAGACGAT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGNACVW*GYWPDD
Trigger: ATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGGAGGTCTGAGAGGCTaGAGCGCATCTGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLGGLRG*SASAFR
Trigger: GCGAAAAGCAGATGCGCTTCAGCCTCTCAGACCTCC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGACAGGCGTGAGTTCTaGGATGCAATTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGDRREF*DAIGGW
Trigger: CCACCCACCAATTGCATCTCAGAACTCACGCCTGTC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGACAGGCGTGAGTTCTaGGATGCAATTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEDRREF*DAIGGW
Trigger: CCACCCACCAATTGCATCTCAGAACTCACGCCTGTC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCTGAATGTAGGCTTTaGGAACTCATATTACTAGGG +
Preference number: 4 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPECRL*ELILLG
Trigger: CCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAGAAGGCAGCATGACTaGGGGGCTGAAACAACCCCT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGRRQHD*GAETTP
Trigger: AGGGGTTGTTTCAGCCCCTCAGTCATGCTGCCTTCT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAGAAGGCAGCATGACTaGGGGGCTGAAACAACCCCT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKRRQHD*GAETTP
Trigger: AGGGGTTGTTTCAGCCCCTCAGTCATGCTGCCTTCT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTGGTGTATGCATGTCTaGGTCTCAGTGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRWCMHV*VSVAGR
Trigger: CCTGCCTGCCACTGAGACGCAGACATGCATACACCA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGAGTGCGGGTGGTGTATaGATGTCTGCGTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGSAGGV*MSASQW
Trigger: CCACTGAGACGCAGACATGCATACACCACCCGCACT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCTCAGGTCCCTCACCTaGTTCTCGGGATCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLLRSLT*FSGSWK
Trigger: CTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACCCACTCCTTTCCCATaGCCTGGTTCCCAATTAGGC +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGPTPFP*PGSQLG
Trigger: GCCTAATTGGGAACCAGGGCATGGGAAAGGAGTGGG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGCCCACTCCTTTCCCATaGCCTGGTTCCCAATTAGGC +
Preference number: 4 (lower is better)
Translates to: VCHQLHILFIATRVHIIGPTPFP*PGSQLG
Trigger: GCCTAATTGGGAACCAGGGCATGGGAAAGGAGTGGG...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTCAAGGAGGAACAATTaGCCCACAATGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDSRRNN*PTMLLP
Trigger: AGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGA...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAGACCCTGGTTAAAGTaGAGTGATGGTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERRPWLK*SDGLER
Trigger: TCTCTCCAGACCATCACTGCACTTTAACCAGGGTCT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGTGCTGTTGCCCCTCGTaGCCAGCAGACAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKCCCPS*PADKEE
Trigger: TTCCTCTTTGTCTGCTGGGCACGAGGGGCAACAGCA...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAATGTCTGCGTCTCAGTaGCAGGCAGGGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKMSASQ*QAGVSP
Trigger: TGGGCTCACCCCTGCCTGCCACTGAGACGCAGACAT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAAAGGAGGCACCACACTaGTTGCAATGGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGKEAPH*LQWKGL
Trigger: AAGGCCCTTCCATTGCAACCAGTGTGGTGCCTCCTT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGCTTGCCCACTGTaGGAGAGGAGACTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTRACPL*ERRLSV
Trigger: CACACTCAGTCTCCTCTCCCACAGTGGGCAAGCCCT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAATTTCGTCACCTGGTTaGCCAGCCAAAGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGISSPG*PAKAWA
Trigger: AGCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAAT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAAGGATGAGTGCAGCATaGAGTCTGGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGRMSAA*SLAPSP
Trigger: TGGAGATGGTGCCAGACTCCATGCTGCACTCATCCT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATGCTTTCTGTGTCTGTaGAGTCCTGGCAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGCFLCL*SPGSHC
Trigger: GCAATGGCTGCCAGGACTCCACAGACACAGAAAGCA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGCTTGGGGTCCTCTTTaGCGTAGGCAGGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDAWGPL*RRQDCA
Trigger: GGCACAGTCCTGCCTACGCCAAAGAGGACCCCAAGC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACCCGAAGCACTTCCTTaGAGGGGCCTGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILPEALP*RGLGCP
Trigger: GGGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAGTGGAAAGGAGTTGTaGACAGGAGGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGSGKEL*TGGWGS
Trigger: ACTCCCCCACCCTCCTGTCCACAACTCCTTTCCACT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAGTGGAAAGGAGTTGTaGACAGGAGGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKSGKEL*TGGWGS
Trigger: ACTCCCCCACCCTCCTGTCCACAACTCCTTTCCACT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGSFPMP*FPIRHL
Trigger: CAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGAGGGTGAATCCTGCTaGGAGGGAGCAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDEGESC*EGAAEG
Trigger: GCCTTCTGCTGCTCCCTCCCAGCAGGATTCACCCTC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGATTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGLLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGCCATCCCAGTCTTGCTaGAACAAGGGTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGPSQSC*NKGGMG
Trigger: CCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGG...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACTCCTACCCTGTGTCTaGGAGCTGAGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGLLPCV*ELSVEG
Trigger: CCCTTCTACACTCAGCTCCCAGACACAGGGTAGGAG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGACCAATCTGGTTCTCTTaGGGAAACCTCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGPIWFS*GNLRVG
Trigger: CCCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGG...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACAGACACAGAAGAGGTaGGAGGCGGTAGGTCTAACA +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGQTQKR*EAVGLT
Trigger: TGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGACCTTCCAGGAAGCGTaGATTCCTGGAAGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKTFQEA*IPGSEG
Trigger: CCCCTCACTTCCAGGAATCCACGCTTCCTGGAAGGT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
3UTR CAA 72 bp AGTCTGCTTGACTCCTCATCGCTGTACATCTCCACCTaGATGGAGTTGGCACTGAGTGAGCGGCTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLLDSSSLYIST*MELALSERLGE
Trigger: TTCTCCTAGCCGCTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAGCAGACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
3UTR CAA 72 bp TGCTTTTCGCCTACAAACTTCTGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTGGCCAGACGATCGATG +
Preference number: 4 (lower is better)
Translates to: CFSPTNFWGVER*RLVRLLARRSM
Trigger: CATCGATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTATCCTTCCCTTGCCGGTaGGACCCTGGGGTGCGAACG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILSFPCR*DPGVRT
Trigger: CGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGA...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGATTGGAGTCTTGGGCCTaGGGCAAGAAATCCGGAACA +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGLESWA*GKKSGT
Trigger: TGTTCCGGATTTCTTGCCTCAGGCCCAAGACTCCAA...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCTCCTTCTCCAGAGATaGGTCCCCGCTACTTTCACA +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKLLLQR*VPATFT
Trigger: TGTGAAAGTAGCGGGGACTCATCTCTGGAGAAGGAG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACTCCTTCTCCAGAGATaGGTCCCCGCTACTTTCACA +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKLLLQR*VPATFT
Trigger: TGTGAAAGTAGCGGGGACTCATCTCTGGAGAAGGAG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGGAGTTGGCACTGAGTaGGCGGCTAGGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKGVGTE*AARRRV
Trigger: CACTCTTCTCCTAGCCGCTCACTCAGTGCCAACTCC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCCCCAGAGTGCAGCTTaGTGTGGCGCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCPQSAA*CGAAGS
Trigger: GGAACCTGCTGCGCCACATCAAGCTGCACTCTGGGG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAACGCTTGCGTTTGGTaGGGCTATTGGCCAGACGAT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGNACVW*GYWPDD
Trigger: ATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGGCAGTGCTCACACTTaGAGGCCTTCACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKGSAHT*RPSQAH
Trigger: GTGAGCCTGTGAAGGCCTTCAAGTGTGAGCACTGCC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGAGACTACTCTGCTCTaGGCTAACCTCCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGETTLL*ANLPIF
Trigger: GAAAATGGGGAGGTTAGCTCAGAGCAGAGTAGTCTC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAACCCCAGGGTGCCGTTaGGGATTCTTCCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKTPGCR*GFFLSL
Trigger: TAGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGAGCATGAGGATGTTTaGGGTTCCAGAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKEHEDV*GSRAGR
Trigger: CCTTCCAGCTCTGGAACCTCAAACATCCTCATGCTC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGAGCTGGGAGAGAGCATaGGGATGTTTGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNESWERA*GCLRFQ
Trigger: CTGGAACCTCAAACATCCTCATGCTCTCTCCCAGCT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCTCCTTCTCCAGAGATaGGTCCCCGCTACATTATCC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNELLLQR*VPATLS
Trigger: GGATAATGTAGCGGGGACTCATCTCTGGAGAAGGAG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR GCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATATAGCCAAGGGTCTCTaGAGTAGCCAGCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDIAKGL*SSQQSP
Trigger: GGGGGACTGCTGGCTACTGCAGAGACCCTTGGCTAT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAATTGCCCCACAATaGTTCTCCCTGCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGTIAPQ*FSLPIW
Trigger: CCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAAACCTCCCCATTTTCTaGCCTTGGCAGCATCTATTT +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERNLPIF*PWQHLF
Trigger: AAATAGATGCTGCCAAGGGCAGAAAATGGGGAGGTT...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAAGGGGAGTGAGGCTCTaGCCCACTCCCATCACAGTA +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKRGVRL*PTPITV
Trigger: TACTGTGATGGGAGTGGGCCAGAGCCTCACTCCCCT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAAGGAGGCACCACACTaGTTGCAATGGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKKEAPH*LQWKGL
Trigger: AAGGCCCTTCCATTGCAACCAGTGTGGTGCCTCCTT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAAGGAGGCACCACACTaGTTGCAATGGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGKEAPH*LQWKGL
Trigger: AAGGCCCTTCCATTGCAACCAGTGTGGTGCCTCCTT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCTGGCCAGCCAAAGCTTaGGCTTCAGTGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLWPAKA*ASVLRL
Trigger: GAGTCTCAGCACTGAAGCCCAAGCTTTGGCTGGCCA...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAACGTATTTCGTCACCTaGTTGGCCAGCCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGTYFVT*LASQSL
Trigger: CAAGCTTTGGCTGGCCAACCAGGTGACGAAATACGT...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGTCGCCTACAAACTTCTaGGGTGTGGAACGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSESPTNF*GVERLR
Trigger: ACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGA...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATTGCTTCTCGGGATCCTaGAAGCTCCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDCFSGS*KLQSTR
Trigger: CCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCA...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGCTTTCTGTGTCTGTaGAGTCCTGGCAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKCFLCL*SPGSHC
Trigger: GCAATGGCTGCCAGGACTCCACAGACACAGAAAGCA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCTCCTTGGGAAATGGTaGGGACAGGGATCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKLLGKW*GQGSMP
Trigger: AGGCATTGATCCCTGTCCCCACCATTTCCCAAGGAG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNESFPMP*FPIRHL
Trigger: CAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATCCTTTCCCATGCCCTaGTTCCCAATTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKSFPMP*FPIRHL
Trigger: CAGGTGCCTAATTGGGAACCAGGGCATGGGAAAGGA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATTGCTGGAACAAGGGTaGAATGGGGTGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTLLEQG*NGVKGT
Trigger: CGTGCCCTTCACCCCATTCCACCCTTGTTCCAGCAA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACTCCTACCCTGTGTCTaGGAGCTGAGTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTLLPCV*ELSVEG
Trigger: CCCTTCTACACTCAGCTCCCAGACACAGGGTAGGAG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCAGACACAGAAGAGGTaGGAGGCGGTAGGTCTAACA +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEQTQKR*EAVGLT
Trigger: TGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAACCTTCCAGGAAGCGTaGATTCCTGGAAGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTTFQEA*IPGSEG
Trigger: CCCCTCACTTCCAGGAATCCACGCTTCCTGGAAGGT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACAGGGGCTCAGACAATaGATCTTCCACAATCACGCT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGQGLRQ*IFHNHA
Trigger: AGCGTGATTGTGGAAGATTCATTGTCTGAGCCCCTG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAATGCGCTTGTGCACCATaGGCACGTTGGGTCCAATAC +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKCACAP*ARWVQY
Trigger: GTATTGGACCCAACGTGCTCATGGTGCACAAGCGCA...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGAGTGTGTGCGGAGGTaGCCAGTGAGTGCATCACGC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCECVRR*PVSASR
Trigger: GCGTGATGCACTCACTGGTCACCTCCGCACACACTC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGACAGGCGTGAGTTCTaGGATGCAATTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDDRREF*DAIGGW
Trigger: CCACCCACCAATTGCATCTCAGAACTCACGCCTGTC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGACAGGCGTGAGTTCTaGGATGCAATTGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKDRREF*DAIGGW
Trigger: CCACCCACCAATTGCATCTCAGAACTCACGCCTGTC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGGTCAGGGTCAGGTGTaGGGTCAGGTGGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCGQGQV*GQVASS
Trigger: ACTACTGGCCACCTGACCTCACACCTGACCCTGACC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACCTGAATGTAGGCTTTaGGAACTCATATTACTAGGG +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERPECRL*ELILLG
Trigger: CCCTAGTAATATGAGTTCTCAAAGCCTACATTCAGG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACCGGGAATGAGAGGGTaGATCCTGCTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILPGMRG*ILLGGS
Trigger: GCTCCCTCCCAGCAGGATTCACCCTCTCATTCCCGG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGCTGGGAGAGAGCATaGGGATGTTTGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTSWERA*GCLRFQ
Trigger: CTGGAACCTCAAACATCCTCATGCTCTCTCCCAGCT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGTGGATTCCTGGAAGTaGGGGGAACCGCCGTCATTT +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDVDSWK*GEPPSF
Trigger: AAATGACGGCGGTTCCCCTCACTTCCAGGAATCCAC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTTGGCACCGCTCCTTGTaGTCCTCCAGGGTACTCTGC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCWHRSL*SSRVLC
Trigger: GCAGAGTACCCTGGAGGAGCACAAGGAGCGGTGCCA...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKPDLRG*FLCLWS
Trigger: ACTCCACAGACACAGAAAGCAACCACGAAGATCGGG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACAAAGAAACCTCCACTTaGAGTGGAGTTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDKETST*SGVVSP
Trigger: AGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACACAATGCTTCTCCCTaGCAATCTGGTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGHNASP*QSGSLG
Trigger: CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCACAATGCTTCTCCCTaGCAATCTGGTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKHNASP*QSGSLG
Trigger: CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGACAATTGCCCCACAATaGTTCTCCCTGCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKTIAPQ*FSLPIW
Trigger: CCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATCAAGGAGGAACAATTaGCCCACAATGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGSRRNN*PTMLLP
Trigger: AGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAGACCCTGGTTAAAGTaGAGTGATGGTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGRPWLK*SDGLER
Trigger: TCTCTCCAGACCATCACTGCACTTTAACCAGGGTCT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGATGAGTGCAGCATaGAGTCTGGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTRMSAA*SLAPSP
Trigger: TGGAGATGGTGCCAGACTCCATGCTGCACTCATCCT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCTCGCCTACAAACTTCTaGGGTGTGGAACGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLSPTNF*GVERLR
Trigger: ACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGA...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGCAACCCGATCTTCGTaGTTGCTTTCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEATRSS*LLSVSV
Trigger: CACAGACACAGAAAGCAACCACGAAGATCGGGTTGC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGGCAACCCGATCTTCGTaGTTGCTTTCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VCHQLHILFIATRVHIIGATRSS*LLSVSV
Trigger: CACAGACACAGAAAGCAACCACGAAGATCGGGTTGC...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTACCCCTCCTGTGGCTTaGGGTCCTCTTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCTPPVA*GPLWRR
Trigger: CCTACGCCAAAGAGGACCCCAAGCCACAGGAGGGGT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACAAAATTGGCCTAAAGTaGAAAGGAGTTGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDKIGLK*KGVVDR
Trigger: CCTGTCCACAACTCCTTTCCACTTTAGGCCAATTTT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGPIRHL*LPICQR
Trigger: TCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGGATGGCTGTGGCCTTaGGCAGAAAACTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGGWLWP*AENSCR
Trigger: TCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCAGAGTGGGATGGCTGTaGCCTTGGGCAGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLRVGWL*PWAENS
Trigger: AGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCT...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTTCTCCCTGCCAATCTaGTTCTCTTGGGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEFSLPI*FSWGNL
Trigger: GAGGTTTCCCCAAGAGAACCAGATTGGCAGGGAGAA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCCCATTTTCTGCCCTTaGCAGCATCTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSPIFCP*QHLFIA
Trigger: AGCAATAAATAGATGCTGCCAAGGGCAGAAAATGGG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACAGTCTCTGCTCTCATaGGCACAGAGTATAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGQSLLS*AQSIAS
Trigger: TGAGGCTATACTCTGTGCCCATGAGAGCAGAGACTG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGCAGTCTCTGCTCTCATaGGCACAGAGTATAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEQSLLS*AQSIAS
Trigger: TGAGGCTATACTCTGTGCCCATGAGAGCAGAGACTG...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGATTGTACCTAAGACCCTaGTTAAAGTGCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERLYLRP*LKCSDG
Trigger: ACCATCACTGCACTTTAACCAGGGTCTTAGGTACAA...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGCTTGGGGAGGGGGCTaGAGAGAATGTATATGTGTA +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEAWGGG*RECICV
Trigger: TACACATATACATTCTCTCCAGCCCCCTCCCCAAGC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
3UTR CAA 72 bp TCGCCTACAAACTTCTGGGGTGTGGAACGCTTGCGTTaGGTGAGGCTATTGGCCAGACGATCGATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SPTNFWGVERLR*VRLLARRSMKV
Trigger: AACTTTCATCGATCGTCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATCCCGGGTGTTGCCAATaGCTCTCATATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDPGCCQ*LSYVCL
Trigger: CAGACACACATATGAGAGTCATTGGCAACACCCGGG...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262032.9
ENST00000431367.6
CDS-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAATTGGAGTCTTGGGCCTaGGGCAAGAAATCCGGAACA +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKLESWA*GKKSGT
Trigger: TGTTCCGGATTTCTTGCCTCAGGCCCAAGACTCCAA...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACTTGGGCTTCAGTGCTaGGACTCTGTAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKLGLQC*DSVGSY
Trigger: ATAACTACCTACAGAGTCTCAGCACTGAAGCCCAAG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGCTTGGGCTTCAGTGCTaGGACTCTGTAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGLGLQC*DSVGSY
Trigger: ATAACTACCTACAGAGTCTCAGCACTGAAGCCCAAG...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGAGACTACTCTGCTCTaGGCTAACCTCCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLETTLL*ANLPIF
Trigger: GAAAATGGGGAGGTTAGCTCAGAGCAGAGTAGTCTC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGAGGCTGAAGCGCATCTaGTTTTCGCCTACAAACTTC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNERLKRI*FSPTNF
Trigger: GAAGTTTGTAGGCGAAAAGCAGATGCGCTTCAGCCT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPDLRG*FLCLWS
Trigger: ACTCCACAGACACAGAAAGCAACCACGAAGATCGGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLPDLRG*FLCLWS
Trigger: ACTCCACAGACACAGAAAGCAACCACGAAGATCGGG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTACAAAATCCTATCTaGAGCTTGGACACTGACACA +
Preference number: 4 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLQNPI*SLDTDT
Trigger: TGTGTCAGTGTCCAAGCTGCAGATAGGATTTTGTAA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATATTTCGTCACCTGGTTaGCCAGCCAAAGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDISSPG*PAKAWA
Trigger: AGCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAAT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATAGGATGAGTGCAGCATaGAGTCTGGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDRMSAA*SLAPSP
Trigger: TGGAGATGGTGCCAGACTCCATGCTGCACTCATCCT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGTGTCTGTGGAGTCCTaGCAGCCATTGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCVSVES*QPLLGD
Trigger: ATCCCCCAGCAATGGCTGCCAGGACTCCACAGACAC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGCAACCCGATCTTCGTaGTTGCTTTCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLATRSS*LLSVSV
Trigger: CACAGACACAGAAAGCAACCACGAAGATCGGGTTGC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAACCCCTCCTGTGGCTTaGGGTCCTCTTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILTPPVA*GPLWRR
Trigger: CCTACGCCAAAGAGGACCCCAAGCCACAGGAGGGGT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAGGGCACAAGAGGTATaGAGTACCAGGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKRAQEV*STRLKS
Trigger: ACTCTTCAACCTGGTACTCCATACCTCTTGTGCCCT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCAATTAGGCACCTGTaGCTCCCAATCTGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPIRHL*LPICQR
Trigger: TCTCTGACAGATTGGGAGCCACAGGTGCCTAATTGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKNLHLQ*SCISFC
Trigger: GCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTTGACTCCTCATCGCTGTACATCTCCACCTTGATGGAGTTGGCACTGAGTGAGAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LDSSSLYISTLMELALSENLHLQ*SCISFC
Trigger: GCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTT...CTCACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAGCGATGAGGAGTCAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGGATGGCTGTGGCCTTaGGCAGAAAACTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLGWLWP*AENSCR
Trigger: TCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATAGAGTGGGATGGCTGTaGCCTTGGGCAGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDRVGWL*PWAENS
Trigger: AGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATTCTCCCTGCCAATCTaGTTCTCTTGGGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTFSLPI*FSWGNL
Trigger: GAGGTTTCCCCAAGAGAACCAGATTGGCAGGGAGAA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACAGACACAGAAGAGGTaGGAGGCGGTAGGTCTAACA +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKQTQKR*EAVGLT
Trigger: TGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCCCCTCCTTAGCACCTaGTCTTGCCCTTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCPLLST*SCPSSL
Trigger: GAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGATTGAGGTTCCAGAGCTaGAAGGCTCTGAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGLRFQS*KALKSR
Trigger: CCTACTTTTCAGAGCCTTCCAGCTCTGGAACCTCAA...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAGGAGTTGGCACTGAGTaGGCGGCTAGGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILGVGTE*AARRRV
Trigger: CACTCTTCTCCTAGCCGCTCACTCAGTGCCAACTCC...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACAGGGGCTCAGACAATaGATCTTCCACAATCACGCT +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKQGLRQ*IFHNHA
Trigger: AGCGTGATTGTGGAAGATTCATTGTCTGAGCCCCTG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCTTGGGCTTCAGTGCTaGGACTCTGTAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLLGLQC*DSVGSY
Trigger: ATAACTACCTACAGAGTCTCAGCACTGAAGCCCAAG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACATTACTAGGGGAATATaGCCTATTACTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: EMVGTGINACSQGSGVVDITRGI*PITRGI
Trigger: TATTCCCCTAGTAATAGGTCATATTCCCCTAGTAAT...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGAAAGAGAAGAATTTTaGCCCACTCCTTTCCCATGC +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPREREEF*PTPFPC
Trigger: GCATGGGAAAGGAGTGGGTCAAAATTCTTCTCTTTC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGGAAAGAGAAGAATTTTaGCCCACTCCTTTCCCATGC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEEREEF*PTPFPC
Trigger: GCATGGGAAAGGAGTGGGTCAAAATTCTTCTCTTTC...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGATATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAAACAGCCTTTGGTTTaGATCTCAAGGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGKQPLV*ISRKQR
Trigger: TCTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTATCAGAGACAGAGGGTTaGAGACCTAGCCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILSETEG*RPSLGP
Trigger: GGGGCCAAGGCTAGGTCTGCAACCCTCTGTCTCTGA...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGACGTGCCCGTGCTCATaGTGGGATAATTTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRTCPCS*WDNFWL
Trigger: TAACCAAAAATTATCCCAGCATGAGCACGGGCACGT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAAAGGGCACGTGCCCGTaGTCATGCTGGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKKGTCP*SCWDNF
Trigger: AAAATTATCCCAGCATGAGCACGGGCACGTGCCCTT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAACCTCCCCATTTTCTaGCCTTGGCAGCATCTATTT +
Preference number: 4 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGNLPIF*PWQHLF
Trigger: AAATAGATGCTGCCAAGGGCAGAAAATGGGGAGGTT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTATGCTTCTCGGGATCCTaGAAGCTCCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILCFSGS*KLQSTR
Trigger: CCTGGTCGACTGGAGCTTCCAGGATCCCGAGAAGCA...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 4 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGCPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCTTGAGGTTCCAGAGCTaGAAGGCTCTGAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLLRFQS*KALKSR
Trigger: CCTACTTTTCAGAGCCTTCCAGCTCTGGAACCTCAA...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGAGGGAGAAGAGAGGTaGTATTGCACTTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLEGEER*YCTCFC
Trigger: ACAGAAGCAAGTGCAATACCACCTCTCTTCTCCCTC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACCCCAGCAGTCTGCTTaGCTCCTCATCGCTGTACAT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILPQQSA*LLIAVH
Trigger: ATGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTATAGTGAAGAAGTTTaGGAGGTGGAGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRYSEEV*EVEEKE
Trigger: CTCTTTCTCCTCCACCTCTCAAACTTCTTCACTATA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGAAACAGCCTTTGGTTTaGATCTCAAGGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGKQPLV*ISRKQR
Trigger: TCTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGAAACAGCCTTTGGTTTaGATCTCAAGGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VCHQLHILFIATRVHIIGKQPLV*ISRKQR
Trigger: TCTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTT...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTACCCCAGGGTGCCGTTaGGGATTCTTCCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCTPGCR*GFFLSL
Trigger: TAGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGAGCATGAGGATGTTTaGGGTTCCAGAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCEHEDV*GSRAGR
Trigger: CCTTCCAGCTCTGGAACCTCAAACATCCTCATGCTC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACCCACTCCTTTCCCATaGCCTGGTTCCCAATTAGGC +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILPTPFP*PGSQLG
Trigger: GCCTAATTGGGAACCAGGGCATGGGAAAGGAGTGGG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGAAAGAAACCTCCACTTaGAGTGGAGTTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKKETST*SGVVSP
Trigger: AGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAATCAAGGAGGAACAATTaGCCCACAATGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKSRRNN*PTMLLP
Trigger: AGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTTGA...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGAACTGCACAACAAATaGCTGAGAGAGGCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDELHNK*LREARV
Trigger: CACTCTTGCCTCTCTCAGGCATTTGTTGTGCAGTTC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTTGCTTTCTGTGTCTGTaGAGTCCTGGCAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCCFLCL*SPGSHC
Trigger: GCAATGGCTGCCAGGACTCCACAGACACAGAAAGCA...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNECPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKCPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDNLHLQ*SCISFC
Trigger: GCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTTGTACCTAAGACCCTaGTTAAAGTGCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRLYLRP*LKCSDG
Trigger: ACCATCACTGCACTTTAACCAGGGTCTTAGGTACAA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAATTGAGGTTCCAGAGCTaGAAGGCTCTGAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKLRFQS*KALKSR
Trigger: CCTACTTTTCAGAGCCTTCCAGCTCTGGAACCTCAA...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATGAGGGAGAAGAGAGGTaGTATTGCACTTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDEGEER*YCTCFC
Trigger: ACAGAAGCAAGTGCAATACCACCTCTCTTCTCCCTC...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACTCCTTCTCCAGAGATaGGTCCCCGCTACTTTCACA +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILLLLQR*VPATFT
Trigger: TGTGAAAGTAGCGGGGACTCATCTCTGGAGAAGGAG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAATTACTAGGGGAATATaGCCTATTACTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGITRGI*PITRGI
Trigger: TATTCCCCTAGTAATAGGTCATATTCCCCTAGTAAT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAAGCTGGGAGAGAGCATaGGGATGTTTGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILSWERA*GCLRFQ
Trigger: CTGGAACCTCAAACATCCTCATGCTCTCTCCCAGCT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTTACAAAATCCTATCTaGAGCTTGGACACTGACACA +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNELQNPI*SLDTDT
Trigger: TGTGTCAGTGTCCAAGCTGCAGATAGGATTTTGTAA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATTACAAAATCCTATCTaGAGCTTGGACACTGACACA +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKLQNPI*SLDTDT
Trigger: TGTGTCAGTGTCCAAGCTGCAGATAGGATTTTGTAA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGAAGAGAGGTGGTATTaGACTTGCTTCTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKEERWY*TCFCVY
Trigger: ATAAACACAGAAGCAAGTGCAATACCACCTCTCTTC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAATTTCGTCACCTGGTTaGCCAGCCAAAGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILISSPG*PAKAWA
Trigger: AGCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAAT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTATCGCCTACAAACTTCTaGGGTGTGGAACGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILSPTNF*GVERLR
Trigger: ACGCAAGCGTTCCACACCCCAGAAGTTTGTAGGCGA...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACCAATCTGGTTCTCTTaGGGAAACCTCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILPIWFS*GNLRVG
Trigger: CCCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCAGTCTCTGCTCTCATaGGCACAGAGTATAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCQSLLS*AQSIAS
Trigger: TGAGGCTATACTCTGTGCCCATGAGAGCAGAGACTG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCTTGTACCTAAGACCCTaGTTAAAGTGCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: REWDGCGLGQKTLVERNLLYLRP*LKCSDG
Trigger: ACCATCACTGCACTTTAACCAGGGTCTTAGGTACAA...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CAA 72 bp CTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCACTaGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGQKTLVERNLH*QWSCISFCPFS
Trigger: TGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGATTACTAGGGGAATATaGCCTATTACTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNEITRGI*PITRGI
Trigger: TATTCCCCTAGTAATAGGTCATATTCCCCTAGTAAT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAGGCTGAAGCGCATCTaGTTTTCGCCTACAAACTTC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCRLKRI*FSPTNF
Trigger: GAAGTTTGTAGGCGAAAAGCAGATGCGCTTCAGCCT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACCCGATCTTCGTGGTTaGTTTCTGTGTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILPDLRG*FLCLWS
Trigger: ACTCCACAGACACAGAAAGCAACCACGAAGATCGGG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATAAAGAAACCTCCACTTaGAGTGGAGTTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDKETST*SGVVSP
Trigger: AGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAACAATTGCCCCACAATaGTTCTCCCTGCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILTIAPQ*FSLPIW
Trigger: CCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAGACCCTGGTTAAAGTaGAGTGATGGTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCRPWLK*SDGLER
Trigger: TCTCTCCAGACCATCACTGCACTTTAACCAGGGTCT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAACGTATTTCGTCACCTaGTTGGCCAGCCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILTYFVT*LASQSL
Trigger: CAAGCTTTGGCTGGCCAACCAGGTGACGAAATACGT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAAGGAGGGTGGGGGAGTaGCAAGTGACTGATATAAGT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILRRVGE*QVTDIS
Trigger: ACTTATATCAGTCACTTGCCACTCCCCCACCCTCCT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATAAAATTGGCCTAAAGTaGAAAGGAGTTGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: RAKVGPGAGISIKTEELDKIGLK*KGVVDR
Trigger: CCTGTCCACAACTCCTTTCCACTTTAGGCCAATTTT...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCTAAGAGAGAAAAATTaGCCTAAAGTGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKLREKN*PKVERS
Trigger: ACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAATGCCCGTGCTCATGCTaGGATAATTTTTGGTTATAC +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKCPCSC*DNFWLY
Trigger: GTATAACCAAAAATTATCCCAGCATGAGCACGGGCA...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAACCTCCACTTGCAGTaGAGTTGTATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCNLHLQ*SCISFC
Trigger: GCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCCATTTTCTGCCCTTaGCAGCATCTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKPIFCP*QHLFIA
Trigger: AGCAATAAATAGATGCTGCCAAGGGCAGAAAATGGG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
3UTR CAA 72 bp AACTCTTGTAGAAAGAAACCTCCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: NSCRKKPPLAVE*YLLLPLLTNPR
Trigger: CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTCTACAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
3UTR CAA 72 bp AGGTTCCAGAGCTGGAAGGCTCTGAAAAGTAGGATTTaGTACCTAAGACCCTGGTTAAAGTGCAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: RFQSWKALKSRI*YLRPWLKCSDG
Trigger: ACCATCACTGCACTTTAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAGAGCCTTCCAGCTCTGGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR TCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAATTACTAGGGGAATATaGCCTATTACTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTITRGI*PITRGI
Trigger: TATTCCCCTAGTAATAGGTCATATTCCCCTAGTAAT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR TCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGAAAGAGAAGAATTTTaGCCCACTCCTTTCCCATGC +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCEREEF*PTPFPC
Trigger: GCATGGGAAAGGAGTGGGTCAAAATTCTTCTCTTTC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAAGGCTGAAGCGCATCTaGTTTTCGCCTACAAACTTC +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILRLKRI*FSPTNF
Trigger: GAAGTTTGTAGGCGAAAAGCAGATGCGCTTCAGCCT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAACCTCCCCATTTTCTaGCCTTGGCAGCATCTATTT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCNLPIF*PWQHLF
Trigger: AAATAGATGCTGCCAAGGGCAGAAAATGGGGAGGTT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACTAAGAGAGAAAAATTaGCCTAAAGTGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTLREKN*PKVERS
Trigger: ACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACATAGGAGCGGCCATTaGAGTCTTCTATGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILHRSGH*SLLCPF
Trigger: AAATGGACATAGAAGACTGCAATGGCCGCTCCTATG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262032.9
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAAAATTGGCCTAAAGTaGAAAGGAGTTGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCKIGLK*KGVVDR
Trigger: CCTGTCCACAACTCCTTTCCACTTTAGGCCAATTTT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCCCATTTTCTGCCCTTaGCAGCATCTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCPIFCP*QHLFIA
Trigger: AGCAATAAATAGATGCTGCCAAGGGCAGAAAATGGG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAAAAGAAACCTCCACTTaGAGTGGAGTTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILKETST*SGVVSP
Trigger: AGGAGATACAACTCCACTGCAAGTGGAGGTTTCTTT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGAAGAGAGGTGGTATTaGACTTGCTTCTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCEERWY*TCFCVY
Trigger: ATAAACACAGAAGCAAGTGCAATACCACCTCTCTTC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CCA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCTAAGAGAGAAAAATTaGCCTAAAGTGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLLEDLREKNWPKVERSCLREKN*PKVERS
Trigger: ACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR GCA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAGCAGCATCTATTTATTaGTACATTGTCAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LKIRREKRDTRFSLPLILAASIY*YIVKEE
Trigger: TTCCTCCTTGACAATGTAGCAATAAATAGATGCTGC...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS CCA 90 bp GGTGCGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGAGTGCGGGTaGTGTATGCATGTCTGCGTCTCAGTGGCAGGCAGGGGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: GANAAAALETARECG*CMHVCVSVAGRGEP
Trigger: GGGCTCACCCCTGCCTGCCACTGAGACGCAGACATGCATACACCACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS TCA 90 bp GTGAGGGGAACCGCCGTCATTTCGCAGGCAGCAGCAGCGGCACGGTaGGCAGAGGCCCACGGCTGCAGCCAGCAAGAGCAGCTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: VRGTAVISQAAAAAR*AEAHGCSQQEQLSP
Trigger: TGGGCTGAGCTGCTCTTGCTGGCTGCAGCCGTGGGCCTCTGCTCACCGTGCCGCTGCTGCTGCCTGCGAAATGACGGCGGTTCCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547167.6
ENST00000547791.2
ENST00000551103.5
CDS GCA 90 bp ACGCGGCCGCCGCCTTGGAAACGGCGAGGGAGTGCGGGTGGTGTATaGATGTCTGCGTCTCAGTGGCAGGCAGGGGTGAGCCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: TRPPPWKRRGSAGGV*MSASQWQAGVSPAT
Trigger: AGTGGCTGGGCTCACCCCTGCCTGCCACTGAGACGCAGACATGCATACACCACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS GCA 90 bp GAGTCCCCGCTACATTATCCTTCCCTTGCCGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGAGTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: ESPLHYPSLAGETLG*ERGRRLGNGEGVRV
Trigger: CACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATGTAGCGGGGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS GCA 90 bp GATCCCTCTCCAGATTATCCTTCCCTTGCCGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGAGTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: DPSPDYPSLAGETLG*ERGRRLGNGEGVRV
Trigger: CACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATCTGGAGAGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
CDS CCA 90 bp GAGATGAGTCCCCGCTACATTATCCTTCCCTTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: EMSPRYIILPLPVRP*GANAAAALETAREC
Trigger: GCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATGTAGCGGGGACTCATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS TCA 90 bp CTGAGGGCAAGAGCATCACTGCCTGACGTCCACAGGAAGCAGGGCTaGGGCTGGGTGCGCCAGGGCGGAGAGGAAAATGGGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LRARASLPDVHRKQG*GWVRQGGEENGGCR
Trigger: TCTGCAGCCCCCATTTTCCTCTCCGCCCTGGCGCACCCAGCCTCAGCCCTGCTTCCTGTGGACGTCAGGCAGTGATGCTCTTGCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547668.5
ENST00000549519.5
CDS-3UTR CAA 90 bp ATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCTCGGGATCCTGGAAGCTCCAGACCCGAAGCACTTCCTaGGAGGGGCCTGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ISQVLRSLTCFSGSWKLQTRSTS*EGPGVP
Trigger: GGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGGT...CTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAGGACCTGGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS TCA 90 bp GTGAGCCCAGCCACTCACCTTCCAGGAAGCGTGGATTCCTGGAAGTaGGGGGAACCGCCGTCATTTCGCAGGCAGCAGCAGCGGCACGGT +
Preference number: 5 (lower is better)
Translates to: VSPATHLPGSVDSWK*GEPPSFRRQQQRHG
Trigger: ACCGTGCCGCTGCTGCTGCCTGCGAAATGACGGCGGTTCCCCTCACTTCCAGGAATCCACGCTTCCTGGAAGGTGAGTGGCTGGGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS TCA 90 bp CCTACCCTACCTTTATCTAGGCCTGAGGGCAAGAGCATCACTGCCTaGCGTCCACAGGAAGCAGGGCTGAGGCTGGGTGCGCCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: PTLPLSRPEGKSITA*RPQEAGLRLGAPGR
Trigger: CCGCCCTGGCGCACCCAGCCTCAGCCCTGCTTCCTGTGGACGTCAGGCAGTGATGCTCTTGCCCTCAGGCCTAGATAAAGGTAGGGTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547668.5
ENST00000549519.5
ENST00000551124.5
CDS GCA 90 bp GTGTTGTATGCTGGGCACCATACCTTGTGCCCCCGCCAGTCTGGATaGCTGGTGCTGCCTTCTGTGAGCTCAGTGGCTGGGCCTTGCCTA +
Preference number: 5 (lower is better)
Translates to: VLYAGHHTLCPRQSG*LVLPSVSSVAGPCL
Trigger: TAGGCAAGGCCCAGCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CCA 90 bp CCGCCAGTCTGGATGCCTGGTGCTGCCTTCTGTGAGCTCAGTGGCTaGGCCTTGCCTACCCTACCTTTATCTAGGCCTGAGGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: PPVWMPGAAFCELSG*ALPTLPLSRPEGKS
Trigger: GCTCTTGCCCTCAGGCCTAGATAAAGGTAGGGTAGGCAAGGCCCAGCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549519.5
ENST00000551124.5
CDS CCA 90 bp AGCAGTGTTGTATGCTGGGCACCATACCTTGTGCCCCCGCCAGTCTaGATGCCTGGTGCTGCCTTCTGTGAGCTCAGTGGCTGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSVVCWAPYLVPPPV*MPGAAFCELSGWAL
Trigger: CAAGGCCCAGCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS-3UTR CAA 90 bp TTGAAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGCACTTGAGCTTGCCATaGGGCAGCCGGATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: LKAFTGSPLSPTTRSTSLHLSLP*GSRMPP
Trigger: TGGGGGCATCCGGCTGCCCAATGGCAAGCTCAAGTG...CAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCCGCAGACGTCACACTaGAGCTTGCCATTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPPQTSH*SLPLGS
Trigger: GCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCGG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GCGGAGGGGACGCAGATGCTCTGCACCCACAAAGGCCAGGGAACTTCCAAAGCCTCCACCTTGATGGAGTaGGCACTGAGTGAGCGGCTA +
Preference number: 5 (lower is better)
Translates to: AEGTQMLCTHKGQGTSKASTLME*ALSERL
Trigger: TAGCCGCTCACTCAGTGCCAACTCCATCAAGGTGGA...GGCTTTGGAAGTTCCCTGGCCTTTGTGGGTGCAGAGCATCTGCGTCCCCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGCCCCAGCAGTCTGCTaGACTCCTCATCGCTGTACA +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMAPAVC*TPHRCT
Trigger: TGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGGC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCACTTGAGCTTGCCATaGGGCAGCCGGATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: EMVGTGINACSQGSGVVDHLSLP*GSRMPP
Trigger: TGGGGGCATCCGGCTGCCCAATGGCAAGCTCAAGTG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAGAGTCCTGGCAGCCATaGCTGGGGGATGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGESWQP*LGDAPG
Trigger: CCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACTC...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGAGTCCTGGCAGCCATaGCTGGGGGATGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGESWQP*LGDAPG
Trigger: CCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACTC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACCCGAAGCACTTCCTaGGAGGGGCCTGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGTRSTS*EGPGVP
Trigger: GGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGGT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp ATCAGCCAGGTCCTCAGGTCCCTCACCTGCTTCTCGGGATCCTGGAAGCTCCAGGGAGAGAGGGAGAGGTaGCTAGCCCACCTTATGCTC +
Preference number: 5 (lower is better)
Translates to: ISQVLRSLTCFSGSWKLQGERER*LAHLML
Trigger: GAGCATAAGGTGGGCTAGCAACCTCTCCCTCTCTCC...CTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGACCTGAGGACCTGGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAACGCGGCCGCCGCCTaGGAAACGGCGAGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTNAAAA*ETAREC
Trigger: GCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCACCTTGATGGAGTaGGCACTGAGTGAGCGGCTA +
Preference number: 5 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPSTLME*ALSERL
Trigger: TAGCCGCTCACTCAGTGCCAACTCCATCAAGGTGGA...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGTCCACCTTGATGGAGTaGGCACTGAGTGAGCGGCTA +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMSTLME*ALSERL
Trigger: TAGCCGCTCACTCAGTGCCAACTCCATCAAGGTGGA...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGAGGCACCACACTGGTaGCAATGGAAGGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMEAPHW*QWKGLS
Trigger: TGAAAGGCCCTTCCATTGCAACCAGTGTGGTGCCTC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGTATTTCGTCACCTGGTaGGCCAGCCAAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLEYFVTW*ASQSLG
Trigger: GCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAATA...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGTGGAACGCTTGCGTTaGGTGAGGCTATTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMVERLR*VRLLAR
Trigger: TCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCAC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTG +
Preference number: 5 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPWGVER*RLVRLL
Trigger: CAATAGCCTCACCAAACGCAAGCGTTCCACACCCCA...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGAGTCCTGGCAGCCATaGCTGGGGGATGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGESWQP*LGDAPG
Trigger: CCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACTC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGAGTCCTGGCAGCCATaGCTGGGGGATGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRESWQP*LGDAPG
Trigger: CCCTGGGGCATCCCCCAGCAATGGCTGCCAGGACTC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGCCAATCTGGTTCTCTaGGGGAAACCTCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMANLVL*GKPQSG
Trigger: CCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGGC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGCCCCAGCAGTCTGCTaGACTCCTCATCGCTGTACA +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSAPAVC*TPHRCT
Trigger: TGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGGC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGACCCGATCTTCGTGGTaGCTTTCTGTGTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMTRSSW*LSVSVE
Trigger: CTCCACAGACACAGAAAGCAACCACGAAGATCGGGT...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGGAGAGAGGGAGAGGTaGCTAGCCCACCTTATGCTC +
Preference number: 5 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERGERER*LAHLML
Trigger: GAGCATAAGGTGGGCTAGCAACCTCTCCCTCTCTCC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGGCCTTCACAGGCTCACCACTCTCGCCCACCACCCGAAGCACTTCCTTGGAGGTACCCATCCCAGTCTaGCTGGAACAAGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: KAFTGSPLSPTTRSTSLEVPIPV*LEQGWN
Trigger: ATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTAC...CTCCAAGGAAGTGCTTCGGGTGGTGGGCGAGAGTGGTGAGCCTGTGAAGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPLAVE*YLLLPL
Trigger: AAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGAGGGGAGAGCACGCTaGGATGTGCTTGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKEGRAR*DVLGEG
Trigger: CCCCTCCCCAAGCACATCCAAGCGTGCTCTCCCCTC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS CCA 90 bp CTTGTAGGGCTTGCCCACTGTGGGAGAGGAGACTGTGGAGGAGAGTaGAAAGATGGCATCAGAGCTATTTCTCGCTGTGCCCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LVGLAHCGRGDCGGE*KDGIRAISRCALAL
Trigger: CAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCATCTTTCCACTCTCCTCCACAGTCTCCTCTCCCACAGTGGGCAAGCCCTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGCACTTGAGCTTGCCATaGGGCAGCCGGATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGHLSLP*GSRMPP
Trigger: TGGGGGCATCCGGCTGCCCAATGGCAAGCTCAAGTG...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACGAGGCACCACACTGGTaGCAATGGAAGGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: EMVGTGINACSQGSGVVDEAPHW*QWKGLS
Trigger: TGAAAGGCCCTTCCATTGCAACCAGTGTGGTGCCTC...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATCCCCAGAGTGCAGCTaGATGTGGCGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGSPECS*MWRSRF
Trigger: GAACCTGCTGCGCCACATCAAGCTGCACTCTGGGGA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTATTTCGTCACCTGGTaGGCCAGCCAAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSYFVTW*ASQSLG
Trigger: GCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAATA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTG +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSWGVER*RLVRLL
Trigger: CAATAGCCTCACCAAACGCAAGCGTTCCACACCCCA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGCCAATCTGGTTCTCTaGGGGAAACCTCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERANLVL*GKPQSG
Trigger: CCCACTCTGAGGTTTCCCCAAGAGAACCAGATTGGC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCGAGGGGAGAGCACGCTaGGATGTGCTTGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: REWDGCGLGQKTLVERNLEGRAR*DVLGEG
Trigger: CCCCTCCCCAAGCACATCCAAGCGTGCTCTCCCCTC...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS GCA 90 bp ATAGCCATGTACAAAGCAGTGTTGTATGCTGGGCACCATACCTTGTaGCCCCGCCAGTCTGGATGCCTGGTGCTGCCTTCTGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: IAMYKAVLYAGHHTL*PRQSGCLVLPSVSS
Trigger: TGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTAACGCGGCCGCCGCCTaGGAAACGGCGAGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCNAAAA*ETAREC
Trigger: GCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCCGCAGACGTCACACTaGAGCTTGCCATTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKPQTSH*SLPLGS
Trigger: GCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCGG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGCCGCAGACGTCACACTaGAGCTTGCCATTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGPQTSH*SLPLGS
Trigger: GCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCGG...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTGCACCATGAGCACGTaGGGTCCAATACAGACCATG +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSCTMST*GPIQTM
Trigger: CATGGTCTGTATTGGACCCAACGTGCTCATGGTGCA...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGTCCCCAGAGTGCAGCTaGATGTGGCGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNESPECS*MWRSRF
Trigger: GAACCTGCTGCGCCACATCAAGCTGCACTCTGGGGA...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATCCCCAGAGTGCAGCTaGATGTGGCGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKSPECS*MWRSRF
Trigger: GAACCTGCTGCGCCACATCAAGCTGCACTCTGGGGA...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGGTTGCAGACCTAGCCTaGGCCCCTGAGAATATAAAA +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMVADLA*APENIK
Trigger: TTTTATATTCTCAGGGGCCAAGGCTAGGTCTGCAAC...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCGTACCCATCCCAGTCTaGCTGGAACAAGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSVPIPV*LEQGWN
Trigger: ATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTAC...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGGAAAGGCAGATGCTGTaGCCCCTCGTGCCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGERQML*PLVPSR
Trigger: TCTGCTGGGCACGAGGGGCAACAGCATCTGCCTTTC...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547167.6
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGGAAAGGCAGATGCTGTaGCCCCTCGTGCCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKERQML*PLVPSR
Trigger: TCTGCTGGGCACGAGGGGCAACAGCATCTGCCTTTC...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACAGATTATCCTTCCCTaGCCGGTGAGACCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGQIILP*PVRPWG
Trigger: ACCCCAGGGTCTCACCGGCAAGGGAAGGATAATCTG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGACTGTACATCTCCACCTaGATGGAGTTGGCACTGAGT +
Preference number: 5 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERLYIST*MELALS
Trigger: ACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAG...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGCCCCAGCAGTCTGCTaGACTCCTCATCGCTGTACA +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRAPAVC*TPHRCT
Trigger: TGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGGC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGACGTCACACTTGAGCTaGCCATTGGGCAGCCGGATG +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKTSHLS*PLGSRM
Trigger: CATCCGGCTGCCCAATGGCAAGCTCAAGTGTGACGT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGAGGCACCACACTGGTaGCAATGGAAGGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGEAPHW*QWKGLS
Trigger: TGAAAGGCCCTTCCATTGCAACCAGTGTGGTGCCTC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGATATTTCGTCACCTGGTaGGCCAGCCAAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGYFVTW*ASQSLG
Trigger: GCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAATA...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGATGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTG +
Preference number: 5 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGWGVER*RLVRLL
Trigger: CAATAGCCTCACCAAACGCAAGCGTTCCACACCCCA...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTACCCGAAGCACTTCCTaGGAGGGGCCTGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCTRSTS*EGPGVP
Trigger: GGGCACCCCAGGCCCCTCCAAGGAAGTGCTTCGGGT...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGGAGAGAGGGAGAGGTaGCTAGCCCACCTTATGCTC +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRGERER*LAHLML
Trigger: GAGCATAAGGTGGGCTAGCAACCTCTCCCTCTCTCC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTTCCAGTCTCTGCTCTCATGCCAATAATTCCTTCATaGGTCCTACAGACACATAGG +
Preference number: 5 (lower is better)
Translates to: PPLPSLAPGLALPVSALMPIIPS*VLQTHR
Trigger: CCTATGTGTCTGTAGGACCAATGAAGGAATTATTGG...CATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262032.9
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGTCCACCTTGATGGAGTaGGCACTGAGTGAGCGGCTA +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRSTLME*ALSERL
Trigger: TAGCCGCTCACTCAGTGCCAACTCCATCAAGGTGGA...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAACGTCACACTTGAGCTaGCCATTGGGCAGCCGGATG +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTTSHLS*PLGSRM
Trigger: CATCCGGCTGCCCAATGGCAAGCTCAAGTGTGACGT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGAGGCACCACACTGGTaGCAATGGAAGGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKEAPHW*QWKGLS
Trigger: TGAAAGGCCCTTCCATTGCAACCAGTGTGGTGCCTC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATTCCCCAGAGTGCAGCTaGATGTGGCGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RAKVGPGAGISIKTEELDSPECS*MWRSRF
Trigger: GAACCTGCTGCGCCACATCAAGCTGCACTCTGGGGA...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGTATTTCGTCACCTGGTaGGCCAGCCAAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGYFVTW*ASQSLG
Trigger: GCCCAAGCTTTGGCTGGCCAACCAGGTGACGAAATA...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGTGGGGTGTGGAACGCTaGCGTTTGGTGAGGCTATTG +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKWGVER*RLVRLL
Trigger: CAATAGCCTCACCAAACGCAAGCGTTCCACACCCCA...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACTGAGGAGAGAGAAAGAAACCTCCACTaGCAGTGGAGTTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: GQGSMPVVRAVEWWTEERERNLH*QWSCIS
Trigger: GGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTC...TCTCTCCTCAGTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAACACCCCAGGGTGCCGTaGAGGATTCTTCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKHPRVP*RILPFS
Trigger: AGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGTG...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATTACAGGTGCCACAGTaGACTGGGGAAGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTLQVPQ*TGEGDG
Trigger: CCCATCCCCTTCCCCAGTCAACTGTGGCACCTGTAA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS GCA 90 bp CTGTGGAGGAGAGTGGAAAGATGGCATCAGAGCTATTTCTCGCTGTaGCCTGGCTCTGCAGATTCAGCCAAGAGCAAGTATACACTGGCA +
Preference number: 5 (lower is better)
Translates to: LWRRVERWHQSYFSL*PGSADSAKSKYTLA
Trigger: TGCCAGTGTATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCATCTTTCCACTCTCCTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS CCA 90 bp GAGGAGAGTGGAAAGATGGCATCAGAGCTATTTCTCGCTGTGCCCTaGCTCTGCAGATTCAGCCAAGAGCAAGTATACACTGGCATGGGA +
Preference number: 5 (lower is better)
Translates to: EESGKMASELFLAVP*LCRFSQEQVYTGMG
Trigger: TCCCATGCCAGTGTATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCATCTTTCCACTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS-3UTR CAA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACAGATTATCCTTCCCTaGCCGGTGAGACCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKQIILP*PVRPWG
Trigger: ACCCCAGGGTCTCACCGGCAAGGGAAGGATAATCTG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGCCCCAGCAGTCTGCTaGACTCCTCATCGCTGTACA +
Preference number: 5 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKAPAVC*TPHRCT
Trigger: TGTACAGCGATGAGGAGTCAAGCAGACTGCTGGGGC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCACTTGAGCTTGCCATaGGGCAGCCGGATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCHLSLP*GSRMPP
Trigger: TGGGGGCATCCGGCTGCCCAATGGCAAGCTCAAGTG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGTGCACCATGAGCACGTaGGGTCCAATACAGACCATG +
Preference number: 5 (lower is better)
Translates to: VCHQLHILFIATRVHIIGCTMST*GPIQTM
Trigger: CATGGTCTGTATTGGACCCAACGTGCTCATGGTGCA...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGACGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAA +
Preference number: 5 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGRLVRL*ARRSMK
Trigger: TTTCATCGATCGTCTGGCCAATAGCCTCACCAAACG...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAGTGGAACGCTTGCGTTaGGTGAGGCTATTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTVERLR*VRLLAR
Trigger: TCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCAC...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGACCCGATCTTCGTGGTaGCTTTCTGTGTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGTRSSW*LSVSVE
Trigger: CTCCACAGACACAGAAAGCAACCACGAAGATCGGGT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAATGAGACCCGATCTTCGTGGTaGCTTTCTGTGTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QSHSAWGEFLQSLLLPNETRSSW*LSVSVE
Trigger: CTCCACAGACACAGAAAGCAACCACGAAGATCGGGT...CTCATTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGACCCGATCTTCGTGGTaGCTTTCTGTGTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKTRSSW*LSVSVE
Trigger: CTCCACAGACACAGAAAGCAACCACGAAGATCGGGT...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCCTGAGAATATAAAATaGGGGCACTCCAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: EMVGTGINACSQGSGVVDPENIK*GHSKER
Trigger: TCTCTCCTTGGAGTGCCCCAATTTTATATTCTCAGG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAGTACCCATCCCAGTCTaGCTGGAACAAGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGVPIPV*LEQGWN
Trigger: ATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTAC...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGTACCCATCCCAGTCTaGCTGGAACAAGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRVPIPV*LEQGWN
Trigger: ATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTAC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAAGACCCCAGTTCAGTaGTACCCATCCCAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGKTPVQ*YPSQSC
Trigger: GCAAGACTGGGATGGGTACAACTGAACTGGGGTCTT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGAAGACCCCAGTTCAGTaGTACCCATCCCAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRKTPVQ*YPSQSC
Trigger: GCAAGACTGGGATGGGTACAACTGAACTGGGGTCTT...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGAAGACCCCAGTTCAGTaGTACCCATCCCAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: VCHQLHILFIATRVHIIGKTPVQ*YPSQSC
Trigger: GCAAGACTGGGATGGGTACAACTGAACTGGGGTCTT...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGCCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRPLAVE*YLLLPL
Trigger: AAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGG...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGCCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKPLAVE*YLLLPL
Trigger: AAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGG...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACACCCCAGGGTGCCGTaGAGGATTCTTCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTHPRVP*RILPFS
Trigger: AGAGAAAGGAAGAATCCTCAACGGCACCCTGGGGTG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCTTAGCACCTGGTCTTGCCCTCTGAAAAGTAGGATTTaGTACCTAAGACCCTGGTTA +
Preference number: 5 (lower is better)
Translates to: SGERQDAPSPLLSTWSCPLKSRI*YLRPWL
Trigger: TAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAG...AGGGCAAGACCAGGTGCTAAGGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACATACATTATCCTTCCCTaGCCGGTGAGACCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTYIILP*PVRPWG
Trigger: ACCCCAGGGTCTCACCGGCAAGGGAAGGATAATGTA...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCCGCAGACGTCACACTaGAGCTTGCCATTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCPQTSH*SLPLGS
Trigger: GCTGCCCAATGGCAAGCTCAAGTGTGACGTCTGCGG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCTGCACCATGAGCACGTaGGGTCCAATACAGACCATG +
Preference number: 5 (lower is better)
Translates to: REWDGCGLGQKTLVERNLCTMST*GPIQTM
Trigger: CATGGTCTGTATTGGACCCAACGTGCTCATGGTGCA...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAA +
Preference number: 5 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGRLVRL*ARRSMK
Trigger: TTTCATCGATCGTCTGGCCAATAGCCTCACCAAACG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAAGACCCCAGTTCAGTaGTACCCATCCCAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTKTPVQ*YPSQSC
Trigger: GCAAGACTGGGATGGGTACAACTGAACTGGGGTCTT...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCACTTGCAGTGGAGTaGTATCTCCTTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPLAVE*YLLLPL
Trigger: AAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCAAAACAGCCTTTGGTTaGAATCTCAAGGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSKTAFG*NLKEAE
Trigger: CTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTTT...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS GCA 90 bp AGTGGAAAGATGGCATCAGAGCTATTTCTCGCTGTGCCCTGGCTCTaGAGATTCAGCCAAGAGCAAGTATACACTGGCATGGGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: SGKMASELFLAVPWL*RFSQEQVYTGMGRK
Trigger: TTTCCTTCCCATGCCAGTGTATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCATCTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS GCA 90 bp TTTCACAAACATTTCCTTCATAGCCATGTACAAAGCAGTGTTGTATaGTGGGCACCATACCTTGTGCCCCCGCCAGTCTGGATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: FHKHFLHSHVQSSVV*WAPYLVPPPVWMPG
Trigger: ACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTATGAAGGAAATGTTTGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGATACATTACCCGGGTGTaGCCAATGACTCTCATATGT +
Preference number: 5 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGYITRV*PMTLIC
Trigger: ACATATGAGAGTCATTGGCAACACCCGGGTAATGTA...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262032.9
ENST00000431367.6
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCAGATTATCCTTCCCTaGCCGGTGAGACCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCQIILP*PVRPWG
Trigger: ACCCCAGGGTCTCACCGGCAAGGGAAGGATAATCTG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCTGTACATCTCCACCTaGATGGAGTTGGCACTGAGT +
Preference number: 5 (lower is better)
Translates to: REWDGCGLGQKTLVERNLLYIST*MELALS
Trigger: ACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCCGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAA +
Preference number: 5 (lower is better)
Translates to: REWDGCGLGQKTLVERNLRLVRL*ARRSMK
Trigger: TTTCATCGATCGTCTGGCCAATAGCCTCACCAAACG...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CTCTCAGTCCCACAGTGCCTGGGGAGAATTTCTTCAGTCCCTCCTACTTCCAAAGTTGCAGACCTAGCCTaGGCCCCTGAGAATATAAAA +
Preference number: 5 (lower is better)
Translates to: LSVPQCLGRISSVPPTSKVADLA*APENIK
Trigger: TTTTATATTCTCAGGGGCCAAGGCTAGGTCTGCAAC...TTTGGAAGTAGGAGGGACTGAAGAAATTCTCCCCAGGCACTGTGGGACTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGAAAGAAACCTCCACTaGCAGTGGAGTTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRERNLH*QWSCIS
Trigger: GGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTTTACAGGTGCCACAGTaGACTGGGGAAGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCLQVPQ*TGEGDG
Trigger: CCCATCCCCTTCCCCAGTCAACTGTGGCACCTGTAA...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GAAATGGTGGGGACAGGGATCAATGCCTGTAGTCAGGGCAGTGGAGTGGTGGACCTGAAAAGTAGGATTTaGTACCTAAGACCCTGGTTA +
Preference number: 5 (lower is better)
Translates to: EMVGTGINACSQGSGVVDLKSRI*YLRPWL
Trigger: TAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAG...GTCCACCACTCCACTGCCCTGACTACAGGCATTGATCCCTGTCCCCACCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACAAGGGTGGAATGGGGTGAAGTACATTACCCGGGTGTaGCCAATGACTCTCATATGT +
Preference number: 5 (lower is better)
Translates to: SSVVPIPVLLEQGWNGVKYITRV*PMTLIC
Trigger: ACATATGAGAGTCATTGGCAACACCCGGGTAATGTA...CTTCACCCCATTCCACCCTTGTTCCAGCAAGACTGGGATGGGTACAACTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262032.9
ENST00000431367.6
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAACGTCACACTTGAGCTaGCCATTGGGCAGCCGGATG +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILTSHLS*PLGSRM
Trigger: CATCCGGCTGCCCAATGGCAAGCTCAAGTGTGACGT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATCGTTTGGTGAGGCTATaGGCCAGACGATCGATGAAA +
Preference number: 5 (lower is better)
Translates to: RAKVGPGAGISIKTEELDRLVRL*ARRSMK
Trigger: TTTCATCGATCGTCTGGCCAATAGCCTCACCAAACG...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGTGGAACGCTTGCGTTaGGTGAGGCTATTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCVERLR*VRLLAR
Trigger: TCTGGCCAATAGCCTCACCAAACGCAAGCGTTCCAC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAGGAGAGAGGGAGAGGTaGCTAGCCCACCTTATGCTC +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILGERER*LAHLML
Trigger: GAGCATAAGGTGGGCTAGCAACCTCTCCCTCTCTCC...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGGGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAAAAACAGCCTTTGGTTaGAATCTCAAGGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GGSKGRPQFSCTHPSLAGKTAFG*NLKEAE
Trigger: CTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTTT...TCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TGGTTAAAGTGCAGTGATGGTCTGGAGAGAGACAGGATGCCCCCTCTCCCCTCCCTATTTATTGCTACATaGTCAAGGAGGAACAATTGC +
Preference number: 5 (lower is better)
Translates to: WLKCSDGLERDRMPPLPSLFIAT*SRRNNC
Trigger: GCAATTGTTCCTCCTTGACAATGTAGCAATAAATAG...GGAGGGGAGAGGGGGCATCCTGTCTCTCTCCAGACCATCACTGCACTTTAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CAGGTGGCCAGTAGTGAGGGCTACAAAGCAAAACTCCTTGGGAAATGGTGGGGAGGCAGCATCTATTTATaGCTACATTGTCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: QVASSEGYKAKLLGKWWGGSIYL*LHCQGG
Trigger: TCCTCCTTGACAATGTAGCAATAAATAGATGCTGCC...TCCCCACCATTTCCCAAGGAGTTTTGCTTTGTAGCCCTCACTACTGGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GGTAGTAAAGGAAGACCCCAGTTCAGTTGTACCCATCCCAGTCTTGCTGGAACACCTGAGAATATAAAATaGGGGCACTCCAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GSKGRPQFSCTHPSLAGTPENIK*GHSKER
Trigger: TCTCTCCTTGGAGTGCCCCAATTTTATATTCTCAGG...TGTTCCAGCAAGACTGGGATGGGTACAACTGAACTGGGGTCTTCCTTTACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGTTGCAGACCTAGCCTaGGCCCCTGAGAATATAAAA +
Preference number: 5 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKVADLA*APENIK
Trigger: TTTTATATTCTCAGGGGCCAAGGCTAGGTCTGCAAC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CCTCCACTTGCAGTGGAGTTGTATCTCCTTCTGCCCCTTCTCACTAATCCTAGGGGCAGCATCTATTTATaGCTACATTGTCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PPLAVELYLLLPLLTNPRGSIYL*LHCQGG
Trigger: TCCTCCTTGACAATGTAGCAATAAATAGATGCTGCC...CCTAGGATTAGTGAGAAGGGGCAGAAGGAGATACAACTCCACTGCAAGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGAAGAAGAGAGGTGGTATaGCACTTGCTTCTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGRREVV*HLLLCL
Trigger: TAAACACAGAAGCAAGTGCAATACCACCTCTCTTCT...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGAGAAGAGAGGTGGTATaGCACTTGCTTCTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGRREVV*HLLLCL
Trigger: TAAACACAGAAGCAAGTGCAATACCACCTCTCTTCT...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS TCA 90 bp TCACAAAATAAAGATTCCATTATAAAATGGTTGGAGTCTTGGGCCTaGGGCAAGAAATCCGGAACACACCCTCCTGAGGGATCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SQNKDSIIKWLESWA*GKKSGTHPPEGSLS
Trigger: GGAGAGGGATCCCTCAGGAGGGTGTGTTCCGGATTTCTTGCCTCAGGCCCAAGACTCCAACCATTTTATAATGGAATCTTTATTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551701.5
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTATGCACCATGAGCACGTaGGGTCCAATACAGACCATG +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILCTMST*GPIQTM
Trigger: CATGGTCTGTATTGGACCCAACGTGCTCATGGTGCA...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGAGCTAAGGTAGGGCCGGGGGCAGGTATCAGCATCAAAACTGAAGAATTAGATCCTGAGAATATAAAATaGGGGCACTCCAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RAKVGPGAGISIKTEELDPENIK*GHSKER
Trigger: TCTCTCCTTGGAGTGCCCCAATTTTATATTCTCAGG...ATCTAATTCTTCAGTTTTGATGCTGATACCTGCCCCCGGCCCTACCTTAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTGAGAATATAAAATaGGGGCACTCCAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKPENIK*GHSKER
Trigger: TCTCTCCTTGGAGTGCCCCAATTTTATATTCTCAGG...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAACCTCAAAACAGCCTTTGGTTaGAATCTCAAGGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: REWDGCGLGQKTLVERNLKTAFG*NLKEAE
Trigger: CTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTTT...GAGGTTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS CCA 90 bp TGCCCTGGCTCTGCAGATTCAGCCAAGAGCAAGTATACACTGGCATaGGAAGGAAAGGATGTTGCTAAATTGAGTTCTTCTACTTGTCTT +
Preference number: 5 (lower is better)
Translates to: CPGSADSAKSKYTLA*EGKDVAKLSSSTCL
Trigger: AAGACAAGTAGAAGAACTCAATTTAGCAACATCCTTTCCTTCCCATGCCAGTGTATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACTGTACATCTCCACCTaGATGGAGTTGGCACTGAGT +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILLYIST*MELALS
Trigger: ACTCAGTGCCAACTCCATCAAGGTGGAGATGTACAG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp AAGGAGGAACAATTGCCCCACAATGCTTCTCCCTGCCAATCTGGTTCTCTTGGGCTTAAAGCAAGAAGCTaGAAGTCTCTTAGTACTAAG +
Preference number: 5 (lower is better)
Translates to: KEEQLPHNASPCQSGSLGLKARS*KSLSTK
Trigger: CTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAG...CCCAAGAGAACCAGATTGGCAGGGAGAAGCATTGTGGGGCAATTGTTCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp GTGTGCCACCAACTCCACATCCTTTTCATAGCCACCCGAGTTCACATCATAGGGCTTAAAGCAAGAAGCTaGAAGTCTCTTAGTACTAAG +
Preference number: 5 (lower is better)
Translates to: VCHQLHILFIATRVHIIGLKARS*KSLSTK
Trigger: CTTAGTACTAAGAGACTTCAAGCTTCTTGCTTTAAG...CCCTATGATGTGAACTCGGGTGGCTATGAAAAGGATGTGGAGTTGGTGGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTGTTGCAGACCTAGCCTaGGCCCCTGAGAATATAAAA +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCVADLA*APENIK
Trigger: TTTTATATTCTCAGGGGCCAAGGCTAGGTCTGCAAC...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp TCACCAAATACACAGCAGACACAGAAGAGGTGGGAGGCGGTAGGTCTAACAGGACTATTTATTGCTACATaGTCAAGGAGGAACAATTGC +
Preference number: 5 (lower is better)
Translates to: SPNTQQTQKRWEAVGLTGLFIAT*SRRNNC
Trigger: GCAATTGTTCCTCCTTGACAATGTAGCAATAAATAG...TCCTGTTAGACCTACCGCCTCCCACCTCTTCTGTGTCTGCTGTGTATTTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAGGCAGCATCTATTTATaGCTACATTGTCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKGSIYL*LHCQGG
Trigger: TCCTCCTTGACAATGTAGCAATAAATAGATGCTGCC...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp AAGCAGAGAGTGGGATGGCTGTGGCCTTGGGCAGAAAACTCTTGTAGAAAGAAAAGAAGAGAGGTGGTATaGCACTTGCTTCTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: KQRVGWLWPWAENSCRKKRREVV*HLLLCL
Trigger: TAAACACAGAAGCAAGTGCAATACCACCTCTCTTCT...TTTCTTTCTACAAGAGTTTTCTGCCCAAGGCCACAGCCATCCCACTCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAGAAAGAAACCTCCACTaGCAGTGGAGTTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILERNLH*QWSCIS
Trigger: GGAGATACAACTCCACTGCAAGTGGAGGTTTCTTTC...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTAAAAACAGCCTTTGGTTaGAATCTCAAGGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILKTAFG*NLKEAE
Trigger: CTCTGCTTCCTTGAGATTCAAACCAAAGGCTGTTTT...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000551103.5
CDS-3UTR CAA 90 bp GGGCTGCTGGAAGATCTAAGAGAGAAAAATTGGCCTAAAGTGGAAAGGAGTTGTCTGAAAAGTAGGATTTaGTACCTAAGACCCTGGTTA +
Preference number: 5 (lower is better)
Translates to: GLLEDLREKNWPKVERSCLKSRI*YLRPWL
Trigger: TAACCAGGGTCTTAGGTACAAAATCCTACTTTTCAG...ACAACTCCTTTCCACTTTAGGCCAATTTTTCTCTCTTAGATCTTCCAGCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS-3UTR CAA 90 bp CTGAAAATTAGAAGAGAGAAAAGAGATACCCGTTTCTCCCTGCCACTGATCCTACTATTTATTGCTACATaGTCAAGGAGGAACAATTGC +
Preference number: 5 (lower is better)
Translates to: LKIRREKRDTRFSLPLILLFIAT*SRRNNC
Trigger: GCAATTGTTCCTCCTTGACAATGTAGCAATAAATAG...TAGGATCAGTGGCAGGGAGAAACGGGTATCTCTTTTCTCTCTTCTAATTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
CDS CAA 72 bp CCGGTGAGACCCTGGGGTGCGAACGCGGCCGCCGCCTaGGAAACGGCGAGGGAGTGCGGGTGGTGTATGCAT +
Preference number: 6 (lower is better)
Translates to: PVRPWGANAAAA*ETARECGWCMH
Trigger: ATGCATACACCACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS CCA 72 bp GCGGCCGCCGCCTTGGAAACGGCGAGGGAGTGCGGGTaGTGTATGCATGTCTGCGTCTCAGTGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: AAAALETARECG*CMHVCVSVAGR
Trigger: CCTGCCTGCCACTGAGACGCAGACATGCATACACCACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS CCA 72 bp CCCCGCTACATTATCCTTCCCTTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCCGCCTTGGAAACGGCG +
Preference number: 6 (lower is better)
Translates to: PRYIILPLPVRP*GANAAAALETA
Trigger: CGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATGTAGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS GCA 72 bp GCGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGAGTaGGGGTGGTGTATGCATGTCTGCGTCTCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: ANAAAALETARE*GWCMHVCVSVA
Trigger: TGCCACTGAGACGCAGACATGCATACACCACCCGCACTCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS GCA 72 bp CCAGATTATCCTTCCCTTGCCGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGA +
Preference number: 6 (lower is better)
Translates to: PDYPSLAGETLG*ERGRRLGNGEG
Trigger: TCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
CDS CCA 72 bp CCTCTCCAGATTATCCTTCCCTTGCCGGTGAGACCCTaGGGTGCGAACGCGGCCGCCGCCTTGGAAACGGCG +
Preference number: 6 (lower is better)
Translates to: PLQIILPLPVRP*GANAAAALETA
Trigger: CGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATCTGGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
CDS GCA 72 bp CCGCCTTGGAAACGGCGAGGGAGTGCGGGTGGTGTATaGATGTCTGCGTCTCAGTGGCAGGCAGGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: PPWKRRGSAGGV*MSASQWQAGVS
Trigger: GCTCACCCCTGCCTGCCACTGAGACGCAGACATGCATACACCACCCGCACTCCCTCGCCGTTTCCAAGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS GCA 72 bp GCTGGGCACCATACCTTGTGCCCCCGCCAGTCTGGATaGCTGGTGCTGCCTTCTGTGAGCTCAGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: AGHHTLCPRQSG*LVLPSVSSVAG
Trigger: CCCAGCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS GCA 72 bp CTACATTATCCTTCCCTTGCCGGTGAGACCCTGGGGTaGGAACGCGGCCGCCGCCTTGGAAACGGCGAGGGA +
Preference number: 6 (lower is better)
Translates to: LHYPSLAGETLG*ERGRRLGNGEG
Trigger: TCCCTCGCCGTTTCCAAGGCGGCGGCCGCGTTCGCACCCCAGGGTCTCACCGGCAAGGGAAGGATAATGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551103.5
CDS TCA 72 bp AGAGCATCACTGCCTGACGTCCACAGGAAGCAGGGCTaGGGCTGGGTGCGCCAGGGCGGAGAGGAAAATGGG +
Preference number: 6 (lower is better)
Translates to: RASLPDVHRKQG*GWVRQGGEENG
Trigger: CCCATTTTCCTCTCCGCCCTGGCGCACCCAGCCTCAGCCCTGCTTCCTGTGGACGTCAGGCAGTGATGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547668.5
ENST00000549519.5
ENST00000551124.5
CDS CCA 72 bp GAGATGAGTCCCCGCTACCTTGTGCCCCCGCCAGTCTaGATGCCTGGTGCTGCCTTCTGTGAGCTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: EMSPRYLVPPPV*MPGAAFCELSG
Trigger: GCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTAGCGGGGACTCATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549519.5
CDS CCA 72 bp GTATGCTGGGCACCATACCTTGTGCCCCCGCCAGTCTaGATGCCTGGTGCTGCCTTCTGTGAGCTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: VCWAPYLVPPPV*MPGAAFCELSG
Trigger: GCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS TCA 72 bp GCCACTCACCTTCCAGGAAGCGTGGATTCCTGGAAGTaGGGGGAACCGCCGTCATTTCGCAGGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ATHLPGSVDSWK*GEPPSFRRQQQ
Trigger: CTGCTGCTGCCTGCGAAATGACGGCGGTTCCCCTCACTTCCAGGAATCCACGCTTCCTGGAAGGTGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000547167.6
ENST00000547668.5
ENST00000551103.5
CDS TCA 72 bp CCTTTATCTAGGCCTGAGGGCAAGAGCATCACTGCCTaGCGTCCACAGGAAGCAGGGCTGAGGCTGGGTGCG +
Preference number: 6 (lower is better)
Translates to: PLSRPEGKSITA*RPQEAGLRLGA
Trigger: CGCACCCAGCCTCAGCCCTGCTTCCTGTGGACGTCAGGCAGTGATGCTCTTGCCCTCAGGCCTAGATAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547668.5
ENST00000549519.5
ENST00000551124.5
CDS CAA 72 bp CCTGGTGCTGCCTTCTGTGAGCTCAGTGGCTGGGCCTaGCCTACCCTACCTTTATCTAGGCCTGAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: PGAAFCELSGWA*PTLPLSRPEGK
Trigger: CTTGCCCTCAGGCCTAGATAAAGGTAGGGTAGGCAAGGCCCAGCCACTGAGCTCACAGAAGGCAGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547668.5
ENST00000549519.5
ENST00000551124.5
CDS CAA 90 bp GTCTGGATGCCTGGTGCTGCCTTCTGTGAGCTCAGTGGCTGGGCCTaGCCTACCCTACCTTTATCTAGGCCTGAGGGCAAGAGCATCACT +
Preference number: 6 (lower is better)
Translates to: VWMPGAAFCELSGWA*PTLPLSRPEGKSIT
Trigger: AGTGATGCTCTTGCCCTCAGGCCTAGATAAAGGTAGGGTAGGCAAGGCCCAGCCACTGAGCTCACAGAAGGCAGCACCAGGCATCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549519.5
ENST00000551124.5
CDS TCA 72 bp TTGGGCCTGAGGCAAGAAATCCGGAACACACCCTCCTaGGGGATCCCTCTCCAGCTCTATCCCCAAGGCCTA +
Preference number: 6 (lower is better)
Translates to: LGLRQEIRNTPS*GIPLQLYPQGL
Trigger: TAGGCCTTGGGGATAGAGCTGGAGAGGGATCCCTCAGGAGGGTGTGTTCCGGATTTCTTGCCTCAGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551701.5
CDS TCA 72 bp TTGGGCCTGAGGCAAGAAATCCGGAACACACCCTCCTaGGGGATCCCTCTCCAGATTATCCTTCCCTTGCCG +
Preference number: 6 (lower is better)
Translates to: LGLRQEIRNTPS*GIPLQIILPLP
Trigger: CGGCAAGGGAAGGATAATCTGGAGAGGGATCCCTCAGGAGGGTGTGTTCCGGATTTCTTGCCTCAGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000547167.6
ENST00000547668.5
CDS GCA 72 bp TACAAAGCAGTGTTGTATGCTGGGCACCATACCTTGTaGCCCCGCCAGTCTGGATGCCTGGTGCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: YKAVLYAGHHTL*PRQSGCLVLPS
Trigger: AGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CAA 72 bp ATGTACAAAGCAGTGTTGTATGCTGGGCACCATACCTaGTGCCCCCGCCAGTCTGGATGCCTGGTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: MYKAVLYAGHHT*CPRQSGCLVLP
Trigger: AGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CAA 90 bp ACGGCTGCAGCCAGCAAGAGCAGCTCAGCCCAGGGTGTATGTGTGTaGAGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: TAAASKSSSAQGVCV*SVCVCVCVRERERE
Trigger: CTCTCTCTCTCTCTCTCTCACACACACACACACACACACACTCAACACACATACACCCTGGGCTGAGCTGCTCTTGCTGGCTGCAGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547167.6
ENST00000551103.5
CDS CAA 90 bp TTCATAGCCATGTACAAAGCAGTGTTGTATGCTGGGCACCATACCTaGTGCCCCCGCCAGTCTGGATGCCTGGTGCTGCCTTCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: FIAMYKAVLYAGHHT*CPRQSGCLVLPSVS
Trigger: GCTCACAGAAGGCAGCACCAGGCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS GCA 72 bp CATTTCCTTCATAGCCATGTACAAAGCAGTGTTGTATaGTGGGCACCATACCTTGTGCCCCCGCCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: HFLHSHVQSSVV*WAPYLVPPPVW
Trigger: CCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTATGAAGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CCA 72 bp TTCCTTCATAGCCATGTACAAAGCAGTGTTGTATGCTaGGCACCATACCTTGTGCCCCCGCCAGTCTGGATG +
Preference number: 6 (lower is better)
Translates to: FLHSHVQSSVVC*APYLVPPPVWM
Trigger: CATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTATGAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CCA 72 bp TGTTCAGGACAGACATTCTTCCCTACTGTTCCTCTCTaGAGCCCCCAGCCGGTTCAGGATCTTACATTACCC +
Preference number: 6 (lower is better)
Translates to: CSGQTFFPTVPL*SPQPVQDLTLP
Trigger: GGGTAATGTAAGATCCTGAACCGGCTGGGGGCTCCAGAGAGGAACAGTAGGGAAGAATGTCTGTCCTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549519.5
CDS CAA 72 bp CCCCCAGCCGGTTCAGGATCTTACATTACCCGGGTGTaGCCAATGACTCTCATATGTGTGTCTGACCCATCT +
Preference number: 6 (lower is better)
Translates to: PPAGSGSYITRV*PMTLICVSDPS
Trigger: AGATGGGTCAGACACACATATGAGAGTCATTGGCAACACCCGGGTAATGTAAGATCCTGAACCGGCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549519.5
CDS GCA 72 bp ATGGCATCAGAGCTATTTCTCGCTGTGCCCTGGCTCTaGAGATTCAGCCAAGAGCAAGTATACACTGGCATG +
Preference number: 6 (lower is better)
Translates to: MASELFLAVPWL*RFSQEQVYTGM
Trigger: CATGCCAGTGTATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS GCA 72 bp AGAGTGGAAAGATGGCATCAGAGCTATTTCTCGCTGTaGCCTGGCTCTGCAGATTCAGCCAAGAGCAAGTAT +
Preference number: 6 (lower is better)
Translates to: RVERWHQSYFSL*PGSADSAKSKY
Trigger: ATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCATCTTTCCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS CCA 72 bp GGAAAGATGGCATCAGAGCTATTTCTCGCTGTGCCCTaGCTCTGCAGATTCAGCCAAGAGCAAGTATACACT +
Preference number: 6 (lower is better)
Translates to: GKMASELFLAVP*LCRFSQEQVYT
Trigger: AGTGTATACTTGCTCTTGGCTGAATCTGCAGAGCCAGGGCACAGCGAGAAATAGCTCTGATGCCATCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS CAA 72 bp ACAAACATTTCCTTCATAGCCATGTACAAAGCAGTGTaGTATGCTGGGCACCATACCTTGTGCCCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: TNISFIAMYKAV*YAGHHTLCPRQ
Trigger: CTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTATGAAGGAAATGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CAA 72 bp TTCCAGGAAGCGTGGATTCCTTACATTACCCGGGTGTaGCCAATGACTCTCATATGTGTGTCTGACCCATCT +
Preference number: 6 (lower is better)
Translates to: FQEAWIPYITRV*PMTLICVSDPS
Trigger: AGATGGGTCAGACACACATATGAGAGTCATTGGCAACACCCGGGTAATGTAAGGAATCCACGCTTCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262032.9
ENST00000431367.6
ENST00000552689.1
CDS CAA 90 bp TTAAATTTCACAAACATTTCCTTCATAGCCATGTACAAAGCAGTGTaGTATGCTGGGCACCATACCTTGTGCCCCCGCCAGTCTGGATGC +
Preference number: 6 (lower is better)
Translates to: LNFTNISFIAMYKAV*YAGHHTLCPRQSGC
Trigger: GCATCCAGACTGGCGGGGGCACAAGGTATGGTGCCCAGCATACAACACTGCTTTGTACATGGCTATGAAGGAAATGTTTGTGAAATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551124.5
CDS CAA 90 bp ACATATAATACAGTTGAAGACAGCTCAGCTTCATTATCCAAGTGCTaGGGGAGCAGTGCAGAGGGGATAAATTCCCAGGTCATCCTAGGA +
Preference number: 6 (lower is better)
Translates to: TYNTVEDSSASLSKC*GSSAEGINSQVILG
Trigger: TCCTAGGATGACCTGGGAATTTATCCCCTCTGCACTGCTCCCCAAGCACTTGGATAATGAAGCTGAGCTGTCTTCAACTGTATTATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552689.1
CDS CCA 72 bp GAACAATATTTGATGATGAAGGATAATGTGCAGTTATaGGGGCAAGGGAATCCTAGGGCATGTGGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: EQYLMMKDNVQL*GQGNPRACGFR
Trigger: TCTGAAGCCACATGCCCTAGGATTCCCTTGCCCCCATAACTGCACATTATCCTTCATCATCAAATATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547556.1
CDS CCA 72 bp TCTGCAGATTCAGCCAAGAGCAAGTATACACTGGCATaGGAAGGAAAGGATGTTGCTAAATTGAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SADSAKSKYTLA*EGKDVAKLSSS
Trigger: AGAAGAACTCAATTTAGCAACATCCTTTCCTTCCCATGCCAGTGTATACTTGCTCTTGGCTGAATCTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547556.1