RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IKZF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000161405

Ensembl transcript IDs: ENST00000293068.9, ENST00000346243.7, ENST00000346872.8, ENST00000348427.7, ENST00000350532.7, ENST00000351680.7, ENST00000377944.7, ENST00000377945.7, ENST00000377952.6, ENST00000377958.6, ENST00000394189.6, ENST00000439016.2, ENST00000439167.6, ENST00000467757.5, ENST00000535189.5, ENST00000583368.1, ENST00000623724.3

Found 1121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATCTCAGCCCGGGTGAGGGCTATGGGATACATGCTGCTGATAACTaGAACCATCTCCGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGG +
Preference number: 1 (lower is better)
Translates to: HLSPGEGYGIHAADN*NHLRGGSRRCLDQG
Trigger: CCCTTGGTCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCCCTCACCCGGGCTGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CCA 90 bp TATCGCGCCCGGCCCTTTGCATGGGTTTGGTTGTTCCTCAGACCGTaGCCTCCTGGGTGTATGGTGGAAAGCCCGCCTGATAAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: YRARPFAWVWLFLRP*PPGCMVESPPDKRL
Trigger: CAGCCTCTTATCAGGCGGGCTTTCCACCATACACCCAGGAGGCCACGGTCTGAGGAACAACCAAACCCATGCAAAGGGCCGGGCGCGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 90 bp AGCTGCTCCAGGGCTTCAGTGCCCAGCAGTGGCAGATGCAAGTCCTaGCTCTGCCCTTCTGCTAAGATTCTCCTTCACCCTCACCTCCCC +
Preference number: 1 (lower is better)
Translates to: SCSRASVPSSGRCKS*LCPSAKILLHPHLP
Trigger: GGGGAGGTGAGGGTGAAGGAGAATCTTAGCAGAAGGGCAGAGTCAGGACTTGCATCTGCCACTGCTGGGCACTGAAGCCCTGGAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp CGTGGCCTCCTGGGTGTATGGTGGAAAGCCCGCCTGATAAGAGGCTaGTGGGAAATGAAGGAGAGGGGCCTACAAGGCTCTTGTTCAGAG +
Preference number: 1 (lower is better)
Translates to: RGLLGVWWKARLIRG*WEMKERGLQGSCSE
Trigger: CTCTGAACAAGAGCCTTGTAGGCCCCTCTCCTTCATTTCCCACCAGCCTCTTATCAGGCGGGCTTTCCACCATACACCCAGGAGGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp CATGGGTTTGGTTGTTCCTCAGACCGTGGCCTCCTGGGTGTATGGTaGAAAGCCCGCCTGATAAGAGGCTGGTGGGAAATGAAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: HGFGCSSDRGLLGVW*KARLIRGWWEMKER
Trigger: CCTCTCCTTCATTTCCCACCAGCCTCTTATCAGGCGGGCTTTCCACCATACACCCAGGAGGCCACGGTCTGAGGAACAACCAAACCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp TGTGAGATAGACACAGATCTGTGGCGAGGGATTGGGGAAGGTGGGTaGCATCTTGGGACTCTCTCCAGGCTTTCTGGAGTGGGGTCAGTG +
Preference number: 1 (lower is better)
Translates to: CEIDTDLWRGIGEGG*HLGTLSRLSGVGSV
Trigger: CACTGACCCCACTCCAGAAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCTCGCCACAGATCTGTGTCTATCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 90 bp GCCACCCTGAGCCCCAAACCACATTCTGTTCCTTCCTCGTCATTCTaGAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGC +
Preference number: 1 (lower is better)
Translates to: ATLSPKPHSVPSSSF*RQWSSTDHTCGGFG
Trigger: GCCAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGGAAGGAACAGAATGTGGTTTGGGGCTCAGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp TTGCATGGGTTTGGTTGTTCCTCAGACCGTGGCCTCCTGGGTGTATaGTGGAAAGCCCGCCTGATAAGAGGCTGGTGGGAAATGAAGGAG +
Preference number: 1 (lower is better)
Translates to: LHGFGCSSDRGLLGV*WKARLIRGWWEMKE
Trigger: CTCCTTCATTTCCCACCAGCCTCTTATCAGGCGGGCTTTCCACCATACACCCAGGAGGCCACGGTCTGAGGAACAACCAAACCCATGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 90 bp ACAGTGAGGGAGCAAAGCGCTTTGACTTCCCTGGGTGCGACACCATaGAGTGTCTATAGCACGTGGTTAGCTCACGCTGGTTCCAAGGGT +
Preference number: 1 (lower is better)
Translates to: TVREQSALTSLGATP*SVYSTWLAHAGSKG
Trigger: ACCCTTGGAACCAGCGTGAGCTAACCACGTGCTATAGACACTTCATGGTGTCGCACCCAGGGAAGTCAAAGCGCTTTGCTCCCTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 90 bp AGGAGTCCTGAACCCTGGCTTATTCTCAGAACCATTCAGTCGTGCTaGCTTGGAGAACAGAGTCCTTTTCCTGAGGTGGCCCAGGTCCAG +
Preference number: 1 (lower is better)
Translates to: RSPEPWLILRTIQSC*LGEQSPFPEVAQVQ
Trigger: CTGGACCTGGGCCACCTCAGGAAAAGGACTCTGTTCTCCAAGGCAGCACGACTGAATGGTTCTGAGAATAAGCCAGGGTTCAGGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp AGAAGCAAAGCGGCACTTACAGAGTGTGAGATAGACACAGATCTGTaGCGAGGGATTGGGGAAGGTGGGTGGCATCTTGGGACTCTCTCC +
Preference number: 1 (lower is better)
Translates to: RSKAALTECEIDTDL*RGIGEGGWHLGTLS
Trigger: GGAGAGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCTCGCCACAGATCTGTGTCTATCTCACACTCTGTAAGTGCCGCTTTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 90 bp CCTTCAGGCTCTTCTGAGTCCATGGTCCTAAAGGGTCAGGAGTCCTaGACCCTGGCTTATTCTCAGAACCATTCAGTCGTGCTGCCTTGG +
Preference number: 1 (lower is better)
Translates to: PSGSSESMVLKGQES*TLAYSQNHSVVLPW
Trigger: CCAAGGCAGCACGACTGAATGGTTCTGAGAATAAGCCAGGGTTCAGGACTCCTGACCCTTTAGGACCATGGACTCAGAAGAGCCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp CAGCCTGTGAAGGGCAGAAGGGTGAGGCTTCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAGG +
Preference number: 1 (lower is better)
Translates to: QPVKGRRVRLPSKVS*SALPLCGFACMTER
Trigger: CCTTTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGCCTCACCCTTCTGCCCTTCACAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
3UTR CCA 90 bp GATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGTTGGGAGAGAGGCCTCTCTCAGAAG +
Preference number: 1 (lower is better)
Translates to: DRCDSGVLHGCCQCP*SRGHYCWERGLSQK
Trigger: CTTCTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTCCACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR GCA 90 bp GAAATGAAGGAGAGGGGCCTACAAGGCTCTTGTTCAGAGGGAGTCTaGATGAGAAAGTACAGGTACTATCTGAAGCTGCTCCAGGGCTTC +
Preference number: 1 (lower is better)
Translates to: EMKERGLQGSCSEGV*MRKYRYYLKLLQGF
Trigger: GAAGCCCTGGAGCAGCTTCAGATAGTACCTGTACTTTCTCATGCAGACTCCCTCTGAACAAGAGCCTTGTAGGCCCCTCTCCTTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp AGCCCCAAACCACATTCTGTTCCTTCCTCGTCATTCTGCAGACAATaGTCATCCACAGACCACACGTGTGGTGGCTTTGGCAACCAGAAA +
Preference number: 1 (lower is better)
Translates to: SPKPHSVPSSSFCRQ*SSTDHTCGGFGNQK
Trigger: TTTCTGGTTGCCAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGGAAGGAACAGAATGTGGTTTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 90 bp GCCTTGGAGAACAGAGTCCTTTTCCTGAGGTGGCCCAGGTCCAGCTaGTGGTTTCAGATCAAAATTGACCTCCTTCATCGGCACTTATAT +
Preference number: 1 (lower is better)
Translates to: ALENRVLFLRWPRSS*WFQIKIDLLHRHLY
Trigger: ATATAAGTGCCGATGAAGGAGGTCAATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCACCTCAGGAAAAGGACTCTGTTCTCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 90 bp CCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTaGTGTCAGTGTCCGTGGAGTCGTGGCCACTATTGTTGGGAGAGA +
Preference number: 1 (lower is better)
Translates to: PCDFADRCDSGVLHG*CQCPWSRGHYCWER
Trigger: TCTCTCCCAACAATAGTGGCCACGACTCCACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CCA 90 bp TTGGAGAACAGAGTCCTTTTCCTGAGGTGGCCCAGGTCCAGCTGCTaGTTTCAGATCAAAATTGACCTCCTTCATCGGCACTTATATCTC +
Preference number: 1 (lower is better)
Translates to: LENRVLFLRWPRSSC*FQIKIDLLHRHLYL
Trigger: GAGATATAAGTGCCGATGAAGGAGGTCAATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCACCTCAGGAAAAGGACTCTGTTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp CCTGTGTATCTTCATAACAATGGTGGGGCAAAGACTATCTACAGCTaGGGCAAGGGAGAGGCACAGTCTTGTGTTACTTTACAAGCTCTC +
Preference number: 1 (lower is better)
Translates to: PVYLHNNGGAKTIYS*GKGEAQSCVTLQAL
Trigger: GAGAGCTTGTAAAGTAACACAAGACTGTGCCTCTCCCTTGCCCCAGCTGTAGATAGTCTTTGCCCCACCATTGTTATGAAGATACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 90 bp TTGTTTTCTGTTGGTGCTGCCAAACAATTTCCCCCTTTATACCCTTaGTCTGCCAACCTTGACCAAAGGAAAGCGATGTCATCATCCACA +
Preference number: 1 (lower is better)
Translates to: LFSVGAAKQFPPLYP*SANLDQRKAMSSST
Trigger: TGTGGATGATGACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGCACCAACAGAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 90 bp GGGGTATGTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTaGATATCTGGTTCAACTTCAAGACTTAAGGATGCAGAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: GVCTEGSVYLCDGNH*ISGSTSRLKDAEFP
Trigger: TGGAAACTCTGCATCCTTAAGTCTTGAAGTTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTACATACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 90 bp GGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTGGTTGATATATCTCAGAAAGAATGT +
Preference number: 1 (lower is better)
Translates to: GQLVSSSSLWICMYD*KAFPRVVDISQKEC
Trigger: ACATTCTTTCTGAGATATATCAACCACACGTGGAAAAGCCTTTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
3UTR CCA 90 bp GCTCTGCCAACCTTGACCAAAGGAAAGCGATGTCATCATCCACAGTaGATAAATTTCTGGAGTTTCGATGATGGTCTATATTTAAAACCA +
Preference number: 1 (lower is better)
Translates to: ALPTLTKGKRCHHPQ*INFWSFDDGLYLKP
Trigger: TGGTTTTAAATATAGACCATCATCGAAACTCCAGAAATTTATCCACTGTGGATGATGACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 90 bp GAGCAACTCCTCTTTCACAAAGGGAATAAGCAATCTGGCATAGCTTaGAGTCTAGTATTACGGAAATACAGTGATATACTGAAGACTACA +
Preference number: 1 (lower is better)
Translates to: EQLLFHKGNKQSGIA*SLVLRKYSDILKTT
Trigger: TGTAGTCTTCAGTATATCACTGTATTTCCGTAATACTAGACTCCAAGCTATGCCAGATTGCTTATTCCCTTTGTGAAAGAGGAGTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 90 bp ACGCGGCAGTGGTCACACCGATACACATCCATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAGTCTCTTGGGCAGATGGGCGGGGGC +
Preference number: 2 (lower is better)
Translates to: TRQWSHRYTSITSPS*LITLTESLGQMGGG
Trigger: GCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCACTGCCGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 2 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGGCGGGCTGATTGCTTaGGCCCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREGGLIA*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGCAATCAGCCCGCC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGTGGGAAGGCCACCCTaGGCCCCAAACCACATTCTG +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREVGRPP*APNHIL
Trigger: CAGAATGTGGTTTGGGGCTCAGGGTGGCCTTCCCAC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 2 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CAA 90 bp CGGCAGTGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCTCTTGGGCAGATGGGCGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RQWSHRYTSITSPSL*ITLTESLGQMGGGL
Trigger: CAAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCACTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGCTCCAGGGCTTCAGTaGCCAGCAGTGGCAGATGCA +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKAPGLQ*PAVADA
Trigger: TGCATCTGCCACTGCTGGGCACTGAAGCCCTGGAGC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 2 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 2 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGGGCCGAAGCCTGCCTaGTCAAGGAGAACCTCTCAA +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKGPKPA*SRRTSQ
Trigger: TTGAGAGGTTCTCCTTGATCAGGCAGGCTTCGGCCC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGAGTCCCCAGGCTGGTaGAATGGGCCTTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKESPGW*NGPWFH
Trigger: GTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTCTCTCCAGGCTTTCTaGAGTGGGGTCAGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGRESLQAF*SGVSGE
Trigger: CTCTCCACTGACCCCACTCCAGAAAGCCTGGAGAGA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCTGTGGCGAGGGATTaGGGAAGGTGGGTGGCATCT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKSVARD*GRWVAS
Trigger: AGATGCCACCCACCTTCCCCAATCCCTCGCCACAGA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 90 bp GTCCTGAACCCTGGCTTATTCTCAGAACCATTCAGTCGTGCTGCCTaGGAGAACAGAGTCCTTTTCCTGAGGTGGCCCAGGTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: VLNPGLFSEPFSRAA*ENRVLFLRWPRSSC
Trigger: GCAGCTGGACCTGGGCCACCTCAGGAAAAGGACTCTGTTCTCCAAGGCAGCACGACTGAATGGTTCTGAGAATAAGCCAGGGTTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAGGTCGAGGCTGCACTaGGCCATGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALRSRLH*AMIAPL
Trigger: CAGTGGTGCAATCATGGCTCAGTGCAGCCTCGACCT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGAGTCCCCAGGCTGGTaGAATGGGCCTTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALESPGW*NGPWFH
Trigger: GTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTTGCTCTGCCAACCTTaGCCAAAGGAAAGCGATGTC +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGRELLCQP*PKESDV
Trigger: GACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGGCAGATGCAAGTCCTaGCTCTGCCCTTCTGCTAAG +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALGRCKS*LCPSAK
Trigger: CTTAGCAGAAGGGCAGAGTCAGGACTTGCATCTGCC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTGGGGTACTAATGGCTaGGGACTCACAGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKWGTNG*GLTDSE
Trigger: CTCACTGTCTGTGAGTCCTCAGCCATTAGTACCCCA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTCAGTGCCCAGCAGTaGCAGATGCAAGTCCTGACT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKFSAQQ*QMQVLT
Trigger: AGTCAGGACTTGCATCTGCCACTGCTGGGCACTGAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGCCCGGCCCTTTGCATaGGTTTGGTTGTTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALARPFA*VWLFLR
Trigger: TCTGAGGAACAACCAAACCCATGCAAAGGGCCGGGC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 90 bp GCGCAGGGCTTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTGTATGAGCTCACTCTCTTTCTCATA +
Preference number: 2 (lower is better)
Translates to: AQGFGAKIADGVIDG*VHHAGLYELTLFLI
Trigger: TATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGATGGACCAAGCCATCAATAACGCCATCAGCTATCTTGGCGCCGAAGCCCTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp ACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGGGTCACAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 2 (lower is better)
Translates to: THTDHGFDIHTCYTRKGHRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...GTGACCCTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGATAGGAAATGGATCTaGTGCTTGGAGAATGGGGTC +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREDRKWI*CLENGV
Trigger: GACCCCATTCTCCAAGCATCAGATCCATTTCCTATC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGTGAGCCACCGCACCTaGCCCTCCTTAAAACATTCT +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALVSHRT*PSLKHS
Trigger: AGAATGTTTTAAGGAGGGTCAGGTGCGGTGGCTCAC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCACAAGTCCCGATGCTaGCTCTTTGAGTCCTCAGAT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKHKSRC*LFESSD
Trigger: ATCTGAGGACTCAAAGAGTCAGCATCGGGACTTGTG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCCCTTTTCTCTTCTTaGGCTCACAAGTCCCGATGC +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKSLFSS*AHKSRC
Trigger: GCATCGGGACTTGTGAGCTCAAGAAGAGAAAAGGGA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTCCTTCAGGCTCTTCTaGGTCCATGGTCCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALSFRLF*VHGPKG
Trigger: CCCTTTAGGACCATGGACTCAGAAGAGCCTGAAGGA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCCCCCTTTATACCCTTaGTCTGCCAACCTTGACCAA +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKPPLYP*SANLDQ
Trigger: TTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTGGCCCAGGTCCAGCTaGTGGTTTCAGATCAAAATT +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREWPRSS*WFQIKI
Trigger: AATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCCTTCCTCGTCATTCTaGAGACAATGGTCATCCACA +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREPSSSF*RQWSST
Trigger: TGTGGATGACCATTGTCTGCAGAATGACGAGGAAGG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 2 (lower is better)
Translates to: WSHRYTSITSPSLLITLTNLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCCTTTGCATGGGTTTaGTTGTTCCTCAGACCGTGG +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPFAWV*LFLRPW
Trigger: CCACGGTCTGAGGAACAACCAAACCCATGCAAAGGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCAGTCGTGCTGCCTTaGAGAACAGAGTCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKSVVLP*RTESFS
Trigger: GGAAAAGGACTCTGTTCTCCAAGGCAGCACGACTGA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGATAGGAAATGGATCTaGTGCTTGGAGAATGGGGTC +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKDRKWI*CLENGV
Trigger: GACCCCATTCTCCAAGCATCAGATCCATTTCCTATC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTGGGCCGAAGCCTGCCTaGTCAAGGAGAACCTCTCAA +
Preference number: 2 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPGPKPA*SRRTSQ
Trigger: TTGAGAGGTTCTCCTTGATCAGGCAGGCTTCGGCCC...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCATAGACTGAGAACCTaGGCATGCAAAACCACAGTC +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKHRLRT*ACKTTV
Trigger: GACTGTGGTTTTGCATGCTCAGGTTCTCAGTCTATG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGAACCATTCAGTCGTaGTGCCTTGGAGAACAGAGT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKRTIQS*CLGEQS
Trigger: ACTCTGTTCTCCAAGGCAGCACGACTGAATGGTTCT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGGTCAGCAGATCCTCTaGCCTTGTGCATTAAAACAA +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREGQQIL*PCALKQ
Trigger: TTGTTTTAATGCACAAGGGCAGAGGATCTGCTGACC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGACCACACGTGTGGTaGCTTTGGCAACCAGAAATT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKRPHVW*LWQPEI
Trigger: AATTTCTGGTTGCCAAAGCCACCACACGTGTGGTCT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 90 bp CAGAAGTGGCATCCCATTGCGGGCCCGAGACAGGACCATGTGATTTaGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGT +
Preference number: 2 (lower is better)
Translates to: QKWHPIAGPRQDHVI*LIDVILAFFMVAVS
Trigger: ACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 2 (lower is better)
Translates to: HCGPETGPCDFADRCDSGFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTAGCCAGCATTTTGTaGCCTCCTATTCCAGTGCTA +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLASIL*PPIPVL
Trigger: TAGCACTGGAATAGGAGGTCACAAAATGCTGGCTAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGTCTTGCCTCCGCACTTaGTGTTATAACTGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRSCLRT*CYNCSD
Trigger: ATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGA...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGGCATGTGCCACTACTaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREGMCHY*PANFCI
Trigger: AATACAAAAATTAGCTGGGCAGTAGTGGCACATGCC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTGGCCCAGGTCCAGCTaGTGGTTTCAGATCAAAATT +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALWPRSS*WFQIKI
Trigger: AATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp TACATAGGAGCAATCCCTGAGACCAGATATTCACTTCAGCAGGGCTCTGTGTTCCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: YIGAIPETRYSLQQGSVFRGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...GAACACAGAGCCCTGCTGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGGAGTCCTGAACCCTaGCTTATTCTCAGAACCATT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKRSPEP*LILRTI
Trigger: AATGGTTCTGAGAATAAGCCAGGGTTCAGGACTCCT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGTTTCAGATCAAAATTaGCCTCCTTCATCGGCACTT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKVSDQN*PPSSAL
Trigger: AAGTGCCGATGAAGGAGGTCAATTTTGATCTGAAAC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGGATAAGCCATTTGTaGAGTCTGAGGTGGAACATT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKRISHL*SLRWNI
Trigger: AATGTTCCACCTCAGACTGCACAAATGGCTTATCCT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTGTTCAGAGGGAGTCTaGATGAGAAAGTACAGGTAC +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALCSEGV*MRKYRY
Trigger: GTACCTGTACTTTCTCATGCAGACTCCCTCTGAACA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: WSHRYTSITSPSLLITLTALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGTATACATGAGTCACTaGCGGTGGGATCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALVYMSH*RWDQSF
Trigger: AAATGACTGATCCCACCGCCAGTGACTCATGTATAC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: WSHRYTSITSPSLLITLTSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAACTGGTCTCGAACTCCTaGCCTCAAATGATGCGCCTG +
Preference number: 2 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKLVSNS*PQMMRL
Trigger: CAGGCGCATCATTTGAGGTCAGGAGTTCGAGACCAG...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGAACTGCTCAGATTCTTaGCTGGGGTACCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PRQDHVILLIDVILAFFMNCSDS*LGYLLW
Trigger: CCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTT...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGATGACTTATACATCTaGAGAACCGTGATCAGACTT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKDDLYI*RTVIRL
Trigger: AAGTCTGATCACGGTTCTGCAGATGTATAAGTCATC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAAAGTTGGTCTCCTCTaGAAAGACTTGAACACTAAT +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREKVGLL*KDLNTN
Trigger: ATTAGTGTTCAAGTCTTTGCAGAGGAGACCAACTTT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 2 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGTTAGGCGAGGTCATTaGTTTTTAGAAACGATGCTG +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALVRRGH*FLETML
Trigger: CAGCATCGTTTCTAAAAACCAATGACCTCGCCTAAC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGATACAGATGCTACCTaGAAAAACTTTGTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LQVELHRSDEGKSPLGREDTDAT*KNFVLS
Trigger: AGACAGAACAAAGTTTTTCCAGGTAGCATCTGTATC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTAACTGCTCAGATTCTTaGCTGGGGTACCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRNCSDS*LGYLLW
Trigger: CCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTT...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAAAAAGGGCCGAAGCCTaGCTGATCAAGGAGAACCTC +
Preference number: 2 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKKRAEA*LIKENL
Trigger: GAGGTTCTCCTTGATCAGGCAGGCTTCGGCCCTTTT...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 2 (lower is better)
Translates to: HCGPETGPCDFADRCDSGLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCAATCTGGCATAGCTTaGAGTCTAGTATTACGGAAA +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALQSGIA*SLVLRK
Trigger: TTTCCGTAATACTAGACTCCAAGCTATGCCAGATTG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp ACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGGGTCACTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: THTDHGFDIHTCYTRKGHSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...GTGACCCTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTATCATTGGCAAATTTaGTTTGGGTCTGTATCACCA +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALYHWQI*FGSVSP
Trigger: TGGTGATACAGACCCAAAGCAAATTTGCCAATGATA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTCTTCTATAGACAACTaGTTTAGCCCAAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRSSIDN*FSPKQL
Trigger: GAGCTGCTTTGGGCTAAACCAGTTGTCTATAGAAGA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCAGTGGATAAATTTCTaGAGTTTCGATGATGGTCTA +
Preference number: 2 (lower is better)
Translates to: PRHSADNGHPQTTRVVALQWINF*SFDDGL
Trigger: TAGACCATCATCGAAACTCCAGAAATTTATCCACTG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAAATGTAGCCAGACATaGTGGTGTGCACTTGTTGTC +
Preference number: 2 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPKCSQT*WCALVV
Trigger: GACAACAAGTGCACACCACCATGTCTGGCTACATTT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTGGGACTGTTGCCATaGAATTTCATAAAACCTTTT +
Preference number: 2 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLGLLP*NFIKPF
Trigger: AAAAGGTTTTATGAAATTCCATGGCAACAGTCCCAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 90 bp GTGCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTaGACCAAAGGAAAGCGATGTCATCATCCACAGTGGATAAATTTC +
Preference number: 2 (lower is better)
Translates to: VLPNNFPLYTLALPT*TKGKRCHHPQWINF
Trigger: GAAATTTATCCACTGTGGATGATGACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACCTGCGAATAATTTCTaGAGGAAGACAGTGTTTCCC +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRPANNF*RKTVFP
Trigger: GGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 2 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATCCTCTGCAAAGACTTaGACACTAATCTGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRSSAKT*TLIWWK
Trigger: TTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAAGAAAGTGCCTTTGTaGGTGGTCACCTTACTCAGA +
Preference number: 2 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQKKVPL*VVTLLR
Trigger: TCTGAGTAAGGTGACCACTCACAAAGGCACTTTCTT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GCATTGAGCTTTTTCGTTTTGCCACATTGCTTGCTAATCTGTCCAGTACGAGAGTCTTGCCTCCGCACTTaGTGTTATAACTGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: ALSFFVLPHCLLICPVRESCLRT*CYNCSD
Trigger: ATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGA...CTCTCGTACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGTGCTTTGATGTGTCTTaGCTCCGCACTTGCTGTTAT +
Preference number: 2 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKCFDVS*LRTCCY
Trigger: ATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCA...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGCAAACAGCTGCATGTaGCAATTTGTGTGTATGCTT +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRANSCM*QFVCML
Trigger: AAGCATACACACAAATTGGCACATGCAGCTGTTTGC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAACTGATGCTTGGAGAATaGGGTCTTCAGTTACTCGTA +
Preference number: 2 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKLMLGE*GLQLLV
Trigger: TACGAGTAACTGAAGACCCCATTCTCCAAGCATCAG...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 2 (lower is better)
Translates to: PRQDHVILLIDVILAFFMSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 2 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 2 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATTTGTTTTCTGTTGGTaGTGCCAAACAATTTCCCCC +
Preference number: 2 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQFVFCW*CQTISP
Trigger: GGGGGAAATTGTTTGGCAGCACCAACAGAAAACAAA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGATGACTTATACATCTaGAGAACCGTGATCAGACTT +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRDDLYI*RTVIRL
Trigger: AAGTCTGATCACGGTTCTGCAGATGTATAAGTCATC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTTGTTTGTTTTCTGTTaGTGCTGCCAAACAATTTCC +
Preference number: 2 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGLFVFC*CCQTIS
Trigger: GGAAATTGTTTGGCAGCACCAACAGAAAACAAACAA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTTGGCAAATTTGCTTTaGGTCTGTATCACCAATTCT +
Preference number: 2 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPLANLL*VCITNS
Trigger: AGAATTGGTGATACAGACCCAAAGCAAATTTGCCAA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 2 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATATCATTGGCAAATTTaGTTTGGGTCTGTATCACCA +
Preference number: 2 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRYHWQI*FGSVSP
Trigger: TGGTGATACAGACCCAAAGCAAATTTGCCAATGATA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAATCTAGGCTCAGAATaGCACAAAGAAAGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQNLGSE*HKESAF
Trigger: AAAGGCACTTTCTTTGTGGCATTCTGAGCCTAGATT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTGTCATCATCCACAGTaGATAAATTTCTGGAGTTTC +
Preference number: 2 (lower is better)
Translates to: KQFPPLYPCSANLDQRKACHHPQ*INFWSF
Trigger: GAAACTCCAGAAATTTATCCACTGTGGATGATGACA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR TCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATTGCTCTGCCAACCTTaGCCAAAGGAAAGCGATGTC +
Preference number: 2 (lower is better)
Translates to: YSDILKTTHQNTSIPLAELLCQP*PKESDV
Trigger: GACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAACCCCCTTTATACCCTTaGTCTGCCAACCTTGACCAA +
Preference number: 2 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEPPLYP*SANLDQ
Trigger: TTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGG...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATCTTCTACTAATCCCTaGTTCCAAATTCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQSSTNP*FQILFL
Trigger: GAGAAAGAGAATTTGGAAGCAGGGATTAGTAGAAGA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATGTGGAAAATATCATTaGCAAATTTGCTTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKCGKYH*QICFGS
Trigger: AGACCCAAAGCAAATTTGCCAATGATATTTTCCACA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGCTCAGCTTTTCACTaGAGATGGGAAGGTAAAGGA +
Preference number: 2 (lower is better)
Translates to: YSDILKTTHQNTSIPLAESSAFH*RWEGKG
Trigger: TCCTTTACCTTCCCATCTCCAGTGAAAAGCTGAGCT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAGTTAGGCGAGGTCATTaGTTTTTAGAAACGATGCTG +
Preference number: 2 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEVRRGH*FLETML
Trigger: CAGCATCGTTTCTAAAAACCAATGACCTCGCCTAAC...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp GGCGTGAGCTATCGCGCCCGGCCCTTTGCATGGGTTTaGTTGTTCCTCAGACCGTGGCCTCCTGGGTGTATG +
Preference number: 3 (lower is better)
Translates to: GVSYRARPFAWV*LFLRPWPPGCM
Trigger: CATACACCCAGGAGGCCACGGTCTGAGGAACAACCAAACCCATGCAAAGGGCCGGGCGCGATAGCTCACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCGAGACAGGACCATGTG +
Preference number: 3 (lower is better)
Translates to: EEFVRAGNLLQK*HPIAGPRQDHV
Trigger: CACATGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CCA 72 bp CGGCCCTTTGCATGGGTTTGGTTGTTCCTCAGACCGTaGCCTCCTGGGTGTATGGTGGAAAGCCCGCCTGAT +
Preference number: 3 (lower is better)
Translates to: RPFAWVWLFLRP*PPGCMVESPPD
Trigger: ATCAGGCGGGCTTTCCACCATACACCCAGGAGGCCACGGTCTGAGGAACAACCAAACCCATGCAAAGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCTGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 3 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCGGGAGGATGGCTCGTaGCTTGAGCCCAGGAGGTTG +
Preference number: 3 (lower is better)
Translates to: PRHSADNGHPQTTRVVALREDGS*LEPRRL
Trigger: CAACCTCCTGGGCTCAAGCAACGAGCCATCCTCCCG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp GACACAGATCTGTGGCGAGGGATTGGGGAAGGTGGGTaGCATCTTGGGACTCTCTCCAGGCTTTCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: DTDLWRGIGEGG*HLGTLSRLSGV
Trigger: CACTCCAGAAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCTCGCCACAGATCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGATCGCGCCCGGCCCTTaGCATGGGTTTGGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: PRHSADNGHPQTTRVVALIAPGP*HGFGCS
Trigger: GGAACAACCAAACCCATGCAAAGGGCCGGGCGCGAT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp GATAGACACAGATCTGTGGCGAGGGATTGGGGAAGGTaGGTGGCATCTTGGGACTCTCTCCAGGCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: DRHRSVARDWGR*VASWDSLQAFW
Trigger: CCAGAAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCTCGCCACAGATCTGTGTCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp GCGGCACTTACAGAGTGTGAGATAGACACAGATCTGTaGCGAGGGATTGGGGAAGGTGGGTGGCATCTTGGG +
Preference number: 3 (lower is better)
Translates to: AALTECEIDTDL*RGIGEGGWHLG
Trigger: CCCAAGATGCCACCCACCTTCCCCAATCCCTCGCCACAGATCTGTGTCTATCTCACACTCTGTAAGTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGAGGCTGAGGCAGGATaGCTTGAGCACAGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKEAEAG*LEHRSL
Trigger: CAAACTCCTGTGCTCAAGCAATCCTGCCTCAGCCTC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp GATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGTTGGGAGAGAGGCCTC +
Preference number: 3 (lower is better)
Translates to: DSGVLHGCCQCP*SRGHYCWERGL
Trigger: GAGGCCTCTCTCCCAACAATAGTGGCCACGACTCCACGGACACTGACAGCAACCATGAAGAACGCCAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CCA 72 bp AAGCAGGCCCACCAAAAAGGGCCTTGTCTGCTAGCCTaGAGTATACATGAGTCACTGGCGGTGGGATCAGTC +
Preference number: 3 (lower is better)
Translates to: KQAHQKGPCLLA*SIHESLAVGSV
Trigger: GACTGATCCCACCGCCAGTGACTCATGTATACTCCAGGCTAGCAGACAAGGCCCTTTTTGGTGGGCCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCCGATGCTGACTCTTaGAGTCCTCAGATAGCCAGG +
Preference number: 3 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPDADS*SPQIAR
Trigger: CCTGGCTATCTGAGGACTCAAAGAGTCAGCATCGGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCTCCCTTTTCTCTTCTaGAGCTCACAAGTCCCGATG +
Preference number: 3 (lower is better)
Translates to: LQVELHRSDEGKSPLGRELPFLF*SSQVPM
Trigger: CATCGGGACTTGTGAGCTCAAGAAGAGAAAAGGGAG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp GAGCAAAGCGCTTTGACTTCCCTGGGTGCGACACCATaGAGTGTCTATAGCACGTGGTTAGCTCACGCTGGT +
Preference number: 3 (lower is better)
Translates to: EQSALTSLGATP*SVYSTWLAHAG
Trigger: ACCAGCGTGAGCTAACCACGTGCTATAGACACTTCATGGTGTCGCACCCAGGGAAGTCAAAGCGCTTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp CCCCATTCCGGAGCTCAACTCCGATCTAAACACACATaGCATCTATCTCCAATTCCTCTCCTGTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PHSGAQLRSKHT*HLSPIPLLWGG
Trigger: CCCTCCCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAGCTCCGGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp GCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATaGAAAAGGTGGTCTCAGGCTGGGTGCGGTAGCTCA +
Preference number: 3 (lower is better)
Translates to: AGGMGLGFTILR*KRWSQAGCGSS
Trigger: TGAGCTACCGCACCCAGCCTGAGACCACCTTTTGCATCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp GACCAAGGGGCGCAGGGCTTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: DQGAQGFGAKIADGVIDGFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...GCCATCAATAACGCCATCAGCTATCTTGGCGCCGAAGCCCTGCGCCCCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGCAACCCACAGTAATTaGGTTTCTGTGAACCCACAG +
Preference number: 3 (lower is better)
Translates to: LQVELHRSDEGKSPLGREATHSN*VSVNPQ
Trigger: CTGTGGGTTCACAGAAACCAAATTACTGTGGGTTGC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp AGAGTCCTTTTCCTGAGGTGGCCCAGGTCCAGCTGCTaGTTTCAGATCAAAATTGACCTCCTTCATCGGCAC +
Preference number: 3 (lower is better)
Translates to: RVLFLRWPRSSC*FQIKIDLLHRH
Trigger: GTGCCGATGAAGGAGGTCAATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCACCTCAGGAAAAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 3 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 3 (lower is better)
Translates to: LQVELHRSDEGKSPLGREVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAGAAGGATAAGCCATTaGTGCAGTCTGAGGTGGAAC +
Preference number: 3 (lower is better)
Translates to: PRHSADNGHPQTTRVVALRRISH*CSLRWN
Trigger: GTTCCACCTCAGACTGCACAAATGGCTTATCCTTCT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCTTGGTTTCACAATCTaGAGATGCAAAAGGTGGTCT +
Preference number: 3 (lower is better)
Translates to: LQVELHRSDEGKSPLGRELGFTI*RCKRWS
Trigger: AGACCACCTTTTGCATCTCAAGATTGTGAAACCAAG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp CAAGAGAGGAAGAAGCAAAGCGGCACTTACAGAGTGTaGGATAGACACAGATCTGTGGCGAGGGATTGGGGA +
Preference number: 3 (lower is better)
Translates to: QERKKQSGTYRV*DRHRSVARDWG
Trigger: TCCCCAATCCCTCGCCACAGATCTGTGTCTATCTCACACTCTGTAAGTGCCGCTTTGCTTCTTCCTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp GAGAGGGGCCTACAAGGCTCTTGTTCAGAGGGAGTCTaGATGAGAAAGTACAGGTACTATCTGAAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: ERGLQGSCSEGV*MRKYRYYLKLL
Trigger: GAGCAGCTTCAGATAGTACCTGTACTTTCTCATGCAGACTCCCTCTGAACAAGAGCCTTGTAGGCCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp TCTTCTGAGTCCATGGTCCTAAAGGGTCAGGAGTCCTaGACCCTGGCTTATTCTCAGAACCATTCAGTCGTG +
Preference number: 3 (lower is better)
Translates to: SSESMVLKGQES*TLAYSQNHSVV
Trigger: CACGACTGAATGGTTCTGAGAATAAGCCAGGGTTCAGGACTCCTGACCCTTTAGGACCATGGACTCAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 3 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGATATCATTGGCAAATTaGCTTTGGGTCTGTATCACC +
Preference number: 3 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKISLAN*LWVCIT
Trigger: GGTGATACAGACCCAAAGCAAATTTGCCAATGATAT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAACATGTTGGGACTGTaGCCATGGAATTTCATAAAA +
Preference number: 3 (lower is better)
Translates to: LQVELHRSDEGKSPLGRENMLGL*PWNFIK
Trigger: TTTTATGAAATTCCATGGCAACAGTCCCAACATGTT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp TTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTaGTGTCAGTGTCCGTGGAGTCGTGGCCACTATTGT +
Preference number: 3 (lower is better)
Translates to: FADRCDSGVLHG*CQCPWSRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR GCA 72 bp GTTGGTGCTGCCAAACAATTTCCCCCTTTATACCCTTaGTCTGCCAACCTTGACCAAAGGAAAGCGATGTCA +
Preference number: 3 (lower is better)
Translates to: VGAAKQFPPLYP*SANLDQRKAMS
Trigger: TGACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGCACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp ACAACTGGTTTAGCCCAAAGCAGCTCAGCTTTTCACTaGAGATGGGAAGGTAAAGGACAGAAGCAGAAGTGC +
Preference number: 3 (lower is better)
Translates to: TTGLAQSSSAFH*RWEGKGQKQKC
Trigger: GCACTTCTGCTTCTGTCCTTTACCTTCCCATCTCCAGTGAAAAGCTGAGCTGCTTTGGGCTAAACCAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: HCGPETGPCDFADRCDSGFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACTTGCTCTGCCAACCTaGACCAAAGGAAAGCGATGT +
Preference number: 3 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRLALPT*TKGKRC
Trigger: ACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGATTGGCAAATTTGCTTaGGGTCTGTATCACCAATTC +
Preference number: 3 (lower is better)
Translates to: PRHSADNGHPQTTRVVALIGKFA*GLYHQF
Trigger: GAATTGGTGATACAGACCCAAAGCAAATTTGCCAAT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp GCTAATTCTTTGCAACCCACAGTAATTTGGTTTCTGTaGACCCACAGAAGCAGGCCCACCAAAAAGGGCCTT +
Preference number: 3 (lower is better)
Translates to: ANSLQPTVIWFL*THRSRPTKKGL
Trigger: AAGGCCCTTTTTGGTGGGCCTGCTTCTGTGGGTTCACAGAAACCAAATTACTGTGGGTTGCAAAGAATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp TTAGCTCACGCTGGTTCCAAGGGTCAGCAGATCCTCTaGCCTTGTGCATTAAAACAACATGAAGGAAACTGT +
Preference number: 3 (lower is better)
Translates to: LAHAGSKGQQIL*PCALKQHEGNC
Trigger: ACAGTTTCCTTCATGTTGTTTTAATGCACAAGGGCAGAGGATCTGCTGACCCTTGGAACCAGCGTGAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTATACCTTTCTGTTTTTaGTTCCTCTCCACCACCTTC +
Preference number: 3 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPIPFCF*FLSTTF
Trigger: GAAGGTGGTGGAGAGGAACAAAAAACAGAAAGGTAT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp AGCTCTTTCACTTCCCATCTCTGCTTTGATGTGTCTTaGCTCCGCACTTGCTGTTATAACTGCTCAGATTCT +
Preference number: 3 (lower is better)
Translates to: SSFTSHLCFDVS*LRTCCYNCSDS
Trigger: AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR GCA 72 bp ACAGACGCCATGCCACAAAGAAGGATAAGCCATTTGTaGAGTCTGAGGTGGAACATTTTAATTACTGGCAGC +
Preference number: 3 (lower is better)
Translates to: TDAMPQRRISHL*SLRWNILITGS
Trigger: GCTGCCAGTAATTAAAATGTTCCACCTCAGACTGCACAAATGGCTTATCCTTCTTTGTGGCATGGCGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 3 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAATAGGCTCCATGAAGTaGTCCCTGGAAGCAGAATTT +
Preference number: 3 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQIGSMK*SLEAEF
Trigger: AAATTCTGCTTCCAGGGACAACTTCATGGAGCCTAT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp ACCACAGTCTGGGTGAAGGGATGTCTGCTTTGTAAATaGCCTGCTAATTCTTTGCAACCCACAGTAATTTGG +
Preference number: 3 (lower is better)
Translates to: TTVWVKGCLLCK*PANSLQPTVIW
Trigger: CCAAATTACTGTGGGTTGCAAAGAATTAGCAGGTCATTTACAAAGCAGACATCCCTTCACCCAGACTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp AACAGCTCACAGTGGGTCATAAAGCATAAGATTAGCTaGCTTATCTGTGCCAAGGCGAATGTCTTTTTGGGA +
Preference number: 3 (lower is better)
Translates to: NSSQWVIKHKIS*LICAKANVFLG
Trigger: TCCCAAAAAGACATTCGCCTTGGCACAGATAAGCCAGCTAATCTTATGCTTTATGACCCACTGTGAGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 3 (lower is better)
Translates to: PRQDHVILLIDVILAFFMLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAACATGTTGGGACTGTaGCCATGGAATTTCATAAAA +
Preference number: 3 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPNMLGL*PWNFIK
Trigger: TTTTATGAAATTCCATGGCAACAGTCCCAACATGTT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp GTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTGGTTGATATATCTCAG +
Preference number: 3 (lower is better)
Translates to: VSSSSLWICMYD*KAFPRVVDISQ
Trigger: CTGAGATATATCAACCACACGTGGAAAAGCCTTTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
3UTR-3UTR CAA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAATTGGCAAATTTGCTTaGGGTCTGTATCACCAATTC +
Preference number: 3 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQIGKFA*GLYHQF
Trigger: GAATTGGTGATACAGACCCAAAGCAAATTTGCCAAT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAACATGGTGGTGTGCACTaGTTGTCCCAGTACTCAAGA +
Preference number: 3 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEHGGVH*LSQYSR
Trigger: TCTTGAGTACTGGGACAACAAGTGCACACCACCATG...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAGCTGCATGTGCCAATTaGTGTGTATGCTTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEAACAN*CVCFVA
Trigger: TGCCACAAAGCATACACACAAATTGGCACATGCAGC...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGAAGGATAAGCCATTaGTGCAGTCTGAGGTGGAAC +
Preference number: 3 (lower is better)
Translates to: YSDILKTTHQNTSIPLAERRISH*CSLRWN
Trigger: GTTCCACCTCAGACTGCACAAATGGCTTATCCTTCT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp GATAACAGCACTCCTCCTGATAGTATGTACATATTATaGGTGACAAGGATGACTTATACATCTGCAGAACCG +
Preference number: 3 (lower is better)
Translates to: DNSTPPDSMYIL*VTRMTYTSAEP
Trigger: CGGTTCTGCAGATGTATAAGTCATCCTTGTCACTCATAATATGTACATACTATCAGGAGGAGTGCTGTTATC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CCA 72 bp ACCTTGACCAAAGGAAAGCGATGTCATCATCCACAGTaGATAAATTTCTGGAGTTTCGATGATGGTCTATAT +
Preference number: 3 (lower is better)
Translates to: TLTKGKRCHHPQ*INFWSFDDGLY
Trigger: ATATAGACCATCATCGAAACTCCAGAAATTTATCCACTGTGGATGATGACATCGCTTTCCTTTGGTCAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 3 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CCA 72 bp CTCTTTCACAAAGGGAATAAGCAATCTGGCATAGCTTaGAGTCTAGTATTACGGAAATACAGTGATATACTG +
Preference number: 3 (lower is better)
Translates to: LFHKGNKQSGIA*SLVLRKYSDIL
Trigger: CAGTATATCACTGTATTTCCGTAATACTAGACTCCAAGCTATGCCAGATTGCTTATTCCCTTTGTGAAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR TCA 72 bp TCATCATCCACAGTGGATAAATTTCTGGAGTTTCGATaGTGGTCTATATTTAAAACCATGAGTTCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: SSSTVDKFLEFR*WSIFKTMSSSG
Trigger: GCCAGAAGAACTCATGGTTTTAAATATAGACCATCATCGAAACTCCAGAAATTTATCCACTGTGGATGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR GCA 72 bp GTACATATTATGAGTGACAAGGATGACTTATACATCTaGAGAACCGTGATCAGACTTTCAGGAATTTTCATG +
Preference number: 3 (lower is better)
Translates to: VHIMSDKDDLYI*RTVIRLSGIFM
Trigger: CATGAAAATTCCTGAAAGTCTGATCACGGTTCTGCAGATGTATAAGTCATCCTTGTCACTCATAATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GACCAAGGGGCGCAGGGCTTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: DQGAQGFGAKIADGVIDGGPGWS*RCGYSA
Trigger: GGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCC...GCCATCAATAACGCCATCAGCTATCTTGGCGCCGAAGCCCTGCGCCCCTTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPEVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCTCGGCCTCTCCACGTaGTCCTGCCGTCGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLGLST*SCRRLD
Trigger: GTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCTGGCATTACAGGCGTaGGCTATCGCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLALQA*AIAPGP
Trigger: AGGGCCGGGCGCGATAGCTCACGCCTGTAATGCCAG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYGPGWS*RCGYSA
Trigger: GGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPNLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKNSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGAGGCTGGAGTGCAGTaGTGCCATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREEAGVQ*CHLGSP
Trigger: CGGTGAGCCGAGATGGCACCACTGCACTCCAGCCTC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 72 bp CAGCTAGTTGGGAGGCTAAGACGGGAGGATGGCTCGTaGCTTGAGCCCAGGAGGTTGAGGCGGCAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: QLVGRLRREDGS*LEPRRLRRQVS
Trigger: GCTTACTTGCCGCCTCAACCTCCTGGGCTCAAGCAACGAGCCATCCTCCCGTCTTAGCCTCCCAACTAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HCGPETGPCDFADRCDSGGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGAGGCTGGAGTGCAGTaGTGCCATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKEAGVQ*CHLGSP
Trigger: CGGTGAGCCGAGATGGCACCACTGCACTCCAGCCTC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGACCTGCTGTGGTCAGTaGAGCCGACACCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRTCCGQ*SRHQGT
Trigger: TGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGT...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEGPGWS*RCGYSA
Trigger: GGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: GYGIHAADNWNHLRGGSREVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTGCCGAGGCTGGAGTaGAGTGGTGCCATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLPRLE*SGAISA
Trigger: AGCCGAGATGGCACCACTGCACTCCAGCCTCGGCAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALEVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLELPL*LLGLST
Trigger: CGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCAGTACCAGTGTCCCCTaGGTCAGTGCTCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPSTSVP*VSALKK
Trigger: TTTCTTCAGAGCACTGACCCAGGGGACACTGGTACT...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGAACCATCTCCGAGGTaGGAGCAGGCGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALEPSPR*EQAVSG
Trigger: TCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGRERGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTTGACGGAGTCTCTTaGGCAGATGGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKFDGVS*ADGRGL
Trigger: AAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGCTCCTGCCGTCGCCTaGACTCAGCGCGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAAPAVA*TQRAAG
Trigger: GCCAGCTGCGCGCTGAGTCCAGGCGACGGCAGGAGC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCAGGCTGGAGTGCAATaGCACGATCTCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKQAGVQ*HDLGSP
Trigger: TGGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAGGGATTGGGGAAGGTaGGTGGCATCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGRERDWGR*VASWDS
Trigger: AGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCGCCTTCCCTCCCAGTaGGAAGGCCACCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPRLPSQ*EGHPEP
Trigger: GGGCTCAGGGTGGCCTTCCCACTGGGAGGGAAGGCG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGCGCCTTCCCTCCCAGTaGGAAGGCCACCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGRLPSQ*EGHPEP
Trigger: GGGCTCAGGGTGGCCTTCCCACTGGGAGGGAAGGCG...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GACCAAGGGGCGCAGGGCTTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DQGAQGFGAKIADGVIDGSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...GCCATCAATAACGCCATCAGCTATCTTGGCGCCGAAGCCCTGCGCCCCTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACACTCCCAACCTCAGGTaGTCTGCCTGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDTPNLR*SACPSL
Trigger: GAGGCTGGGGCAGGCAGATCACCTGAGGTTGGGAGT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGGATGGCTCGTTGCTTaGGCCCAGGAGGTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRGWLVA*AQEVEA
Trigger: CGCCTCAACCTCCTGGGCTCAAGCAACGAGCCATCC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYGPGWS*RCGYSA
Trigger: GGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCGGCAGCGCTCCTTGTaGTCCTCAAGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALRQRSL*SSRELL
Trigger: GAGAAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGCTCAGATTCTTGCCTaGGGTACCTGCTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKAQILA*GTCCGQ
Trigger: CTGACCACAGCAGGTACCCCAGGCAAGAATCTGAGC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCCAGGCTTTCTGGAGTaGGGTCAGTGGAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREPGFLE*GQWRDE
Trigger: TTCATCTCTCCACTGACCCCACTCCAGAAAGCCTGG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 72 bp TACACATCCATCACCTCCCCTTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAGATGGGCGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YTSITSPSLLIT*TESLGQMGGGL
Trigger: CAAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGACCTGCTGTGGTCAGTaGAGCCGACACCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: WSHRYTSITSPSLLITLTTCCGQ*SRHQGT
Trigger: TGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGT...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCGCGTCGGCGCAGACTaGAAAGGGCAGGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRVGAD*KGQEPA
Trigger: CGCCGGCTCCTGCCCTTTTCAGTCTGCGCCGACGCG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAGTACAGGTACTATCTaGAGCTGCTCCAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGRESTGTI*SCSRAS
Trigger: TGAAGCCCTGGAGCAGCTTCAGATAGTACCTGTACT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTTGCCAAAGAAATCTaGGGTTGTGGCTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKFAKEI*GCGWAQ
Trigger: CTGCGCCCAGCCACAACCTCAGATTTCTTTGGCAAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGTGAGCCACCGCACCTaGCCCTCCTTAAAACATTCT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKVSHRT*PSLKHS
Trigger: AGAATGTTTTAAGGAGGGTCAGGTGCGGTGGCTCAC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCACAAGTCCCGATGCTaGCTCTTTGAGTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREHKSRC*LFESSD
Trigger: ATCTGAGGACTCAAAGAGTCAGCATCGGGACTTGTG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGTAATTTGGTTTCTGTaGACCCACAGAAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREVIWFL*THRSRP
Trigger: GGGCCTGCTTCTGTGGGTTCACAGAAACCAAATTAC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGTGGGAAGGCCACCCTaGGCCCCAAACCACATTCTG +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRVGRPP*APNHIL
Trigger: CAGAATGTGGTTTGGGGCTCAGGGTGGCCTTCCCAC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGTGGGAAGGCCACCCTaGGCCCCAAACCACATTCTG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYVGRPP*APNHIL
Trigger: CAGAATGTGGTTTGGGGCTCAGGGTGGCCTTCCCAC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGPGWS*RCGYSA
Trigger: GGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GACCAAGGGGCGCAGGGCTTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCTTCCACTGGTTGGCCTaGTACTATCGAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: DQGAQGFGAKIADGVIDGFHWLA*YYRMRQ
Trigger: TTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAA...GCCATCAATAACGCCATCAGCTATCTTGGCGCCGAAGCCCTGCGCCCCTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYEVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGAACCATCTCCGAGGTaGGAGCAGGCGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDEPSPR*EQAVSG
Trigger: TCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCCAGGCTTTCTGGAGTaGGGTCAGTGGAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKPGFLE*GQWRDE
Trigger: TTCATCTCTCCACTGACCCCACTCCAGAAAGCCTGG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDPGSVL*RNVRQR
Trigger: GCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYPGSVL*RNVRQR
Trigger: GCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGLRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTERWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTGCTCTGCCAACCTTaGCCAAAGGAAAGCGATGTC +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLLCQP*PKESDV
Trigger: GACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGGTCGAGGCTGCACTaGGCCATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYRSRLH*AMIAPL
Trigger: CAGTGGTGCAATCATGGCTCAGTGCAGCCTCGACCT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTGGCGGGCTGATTGCTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPGGLIA*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGCAATCAGCCCGCC...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAACTCCCAACCTCAGGTaGTCTGCCTGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRTPNLR*SACPSL
Trigger: GAGGCTGGGGCAGGCAGATCACCTGAGGTTGGGAGT...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCGGCAGCGCTCCTTGTaGTCCTCAAGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDRQRSL*SSRELL
Trigger: GAGAAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCTCTTGCCTCCGCACTTaGTGTTATAACTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGSCLRT*CYNCSD
Trigger: ATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGA...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTCGCGCCCGGCCCTTTaGATGGGTTTGGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSRPAL*MGLVVP
Trigger: AGGAACAACCAAACCCATGCAAAGGGCCGGGCGCGA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGACCATTCAGTCGTGCTaGCTTGGAGAACAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKTIQSC*LGEQSP
Trigger: AGGACTCTGTTCTCCAAGGCAGCACGACTGAATGGT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTCTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRLELPL*LLGLST
Trigger: CGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAG...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEAAGPG*SCRCGY
Trigger: GTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYNLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDNLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGACTCAGCGCGCAGCTaGCGGGAGATTCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGDSARS*REIPGA
Trigger: CGCGCCGGGAATCTCCCGCCAGCTGCGCGCTGAGTC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTTGAGATGCAAAAGGTaGTCTCAGGCTGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALLRCKR*SQAGCG
Trigger: ACCGCACCCAGCCTGAGACCACCTTTTGCATCTCAA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCCAGGCTGGTGGAATaGGCCTTGGTTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPRLVE*ALVSQS
Trigger: AGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGAGTCCCCAGGCTGGTaGAATGGGCCTTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRESPGW*NGPWFH
Trigger: GTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGGCCTCCTGGGTGTATaGTGGAAAGCCCGCCTGATA +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRGLLGV*WKARLI
Trigger: TATCAGGCGGGCTTTCCACCATACACCCAGGAGGCC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAAGACTATCTACAGCTaGGGCAAGGGAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALKTIYS*GKGEAQ
Trigger: CTGTGCCTCTCCCTTGCCCCAGCTGTAGATAGTCTT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAGTTCCACACATGGCTaGGCTCCAGGTAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALSSTHG*APGRTP
Trigger: TGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAACT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 72 bp TTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTGTATGAGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: FGAKIADGVIDG*VHHAGLYELTL
Trigger: GAGAGTGAGCTCATACAGACCCGCATGATGGACCAAGCCATCAATAACGCCATCAGCTATCTTGGCGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CAA 72 bp TCACACCGATACACATCCATCACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCTCTTGGGCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: SHRYTSITSPSL*ITLTESLGQMG
Trigger: GCCCATCTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCGTATGGCTTCGCTTATaGACCATTAAGACATTGAAG +
Preference number: 4 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPVWLRL*TIKTLK
Trigger: CTTCAATGTCTTAATGGTTCATAAGCGAAGCCATAC...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAACCTGCTGTGGTCAGTaGAGCCGACACCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRTCCGQ*SRHQGT
Trigger: TGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGT...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTELRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKALRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGGGCCGAAGCCTGCCTaGTCAAGGAGAACCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGGPKPA*SRRTSQ
Trigger: TTGAGAGGTTCTCCTTGATCAGGCAGGCTTCGGCCC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGGCGGGCTGATTGCTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRGGLIA*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGCAATCAGCCCGCC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCTGGCATTACAGGCGTaGGCTATCGCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLALQA*AIAPGP
Trigger: AGGGCCGGGCGCGATAGCTCACGCCTGTAATGCCAG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAGGATGGCTCGTTGCTTaGGCCCAGGAGGTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKGWLVA*AQEVEA
Trigger: CGCCTCAACCTCCTGGGCTCAAGCAACGAGCCATCC...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAGCCTGGAGTATACATaGGTCACTGGCGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSLEYT*VTGGGI
Trigger: GATCCCACCGCCAGTGACTCATGTATACTCCAGGCT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAAACCACAGTCTGGGTaGAGGGATGTCTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKKPQSG*RDVCFV
Trigger: TACAAAGCAGACATCCCTTCACCCAGACTGTGGTTT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCCAAAGCTCATAGACTaGGAACCTGAGCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREPKLID*EPEHAK
Trigger: TTTTGCATGCTCAGGTTCTCAGTCTATGAGCTTTGG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTTATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGTCATTCAAAACCGCTaGACTTTCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALVIQNR*TFCGHR
Trigger: TCTGTGCCCGCAGAAAGTGCAGCGGTTTTGAATGAC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTGTTCAGAGGGAGTCTaGATGAGAAAGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGRECSEGV*MRKYRY
Trigger: GTACCTGTACTTTCTCATGCAGACTCCCTCTGAACA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTTGACTTCCCTGGGTaGGACACCATGAAGTGTCTA +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKFDFPG*DTMKCL
Trigger: TAGACACTTCATGGTGTCGCACCCAGGGAAGTCAAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLELPL*LLGLST
Trigger: CGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCAGTCTTATGCCGAGATaGGAAAGCTCGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: HCGPETGPCDFADRCDSGSLMPR*ESSTHP
Trigger: GGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACT...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGCTCAGATTCTTGCCTaGGGTACCTGCTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYAQILA*GTCCGQ
Trigger: CTGACCACAGCAGGTACCCCAGGCAAGAATCTGAGC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGAACCATCTCCGAGGTaGGAGCAGGCGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEEPSPR*EQAVSG
Trigger: TCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYRGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCTCTGTGTTCTCCTCTaGCTATGTGAGACGAGAACT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLCVLL*LCETRT
Trigger: AGTTCTCGTCTCACATAGCCAGAGGAGAACACAGAG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTGTTCCTCAGACCGTaGCCTCCTGGGTGTATGGTG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDLFLRP*PPGCMV
Trigger: CACCATACACCCAGGAGGCCACGGTCTGAGGAACAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGATTTTGAGACTAGCCTaGGCAGTATGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALILRLA*AVWRNA
Trigger: GGCGTTTCGCCATACTGCCCAGGCTAGTCTCAAAAT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTCCTTTTCCTGAGGTaGCCCAGGTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVLFLR*PRSSCW
Trigger: CCAGCAGCTGGACCTGGGCCACCTCAGGAAAAGGAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATATTGGGGAAGGTGGGTaGCATCTTGGGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYIGEGG*HLGTLS
Trigger: GGAGAGAGTCCCAAGATGCCACCCACCTTCCCCAAT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAGGGATTGGGGAAGGTaGGTGGCATCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRRDWGR*VASWDS
Trigger: AGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTCTGTGGCGAGGGATTaGGGAAGGTGGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGSVARD*GRWVAS
Trigger: AGATGCCACCCACCTTCCCCAATCCCTCGCCACAGA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRPGSVL*RNVRQR
Trigger: GCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKLRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCTCTCCTCTGGCTATGTaGGACGAGAACTCATACCGA +
Preference number: 4 (lower is better)
Translates to: HCGPETGPCDFADRCDSGSPLAM*DENSYR
Trigger: TCGGTATGAGTTCTCGTCTCACATAGCCAGAGGAGA...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGAGGCTGAGGCGGGCTaGTTGCTTGAGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFEAEAG*LLEPRS
Trigger: ACTCCTGGGCTCAAGCAATCAGCCCGCCTCAGCCTC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAAGGGTCAGGAGTCCTaGACCCTGGCTTATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDKGQES*TLAYSQ
Trigger: CTGAGAATAAGCCAGGGTTCAGGACTCCTGACCCTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCCTTCAGGCTCTTCTaGGTCCATGGTCCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSFRLF*VHGPKG
Trigger: CCCTTTAGGACCATGGACTCAGAAGAGCCTGAAGGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTGGGGTACTAATGGCTaGGGACTCACAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRWGTNG*GLTDSE
Trigger: CTCACTGTCTGTGAGTCCTCAGCCATTAGTACCCCA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAGCCTGGAGTATACATaGGTCACTGGCGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPSLEYT*VTGGGI
Trigger: GATCCCACCGCCAGTGACTCATGTATACTCCAGGCT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTCCACTGGTTGGCCTaGTACTATCGAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKFHWLA*YYRMRQ
Trigger: TTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAACTGCTCAGATTCTTaGCTGGGGTACCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDNCSDS*LGYLLW
Trigger: CCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAAAAGGGCCGAAGCCTaGCTGATCAAGGAGAACCTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDKRAEA*LIKENL
Trigger: GAGGTTCTCCTTGATCAGGCAGGCTTCGGCCCTTTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCTGAGGCGGGCTGATTaGTTGAGCCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPLRRAD*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAATCAGCCCGCCTCAG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGCTGAGGCGGGCTGATTaGTTGAGCCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGLRRAD*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAATCAGCCCGCCTCAG...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTCGCGCCCGGCCCTTTaGATGGGTTTGGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKASRPAL*MGLVVP
Trigger: AGGAACAACCAAACCCATGCAAAGGGCCGGGCGCGA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATTGCCGAGGCTGGAGTaGAGTGGTGCCATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKLPRLE*SGAISA
Trigger: AGCCGAGATGGCACCACTGCACTCCAGCCTCGGCAA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLELPL*LLGLST
Trigger: CGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTCTGGGGTACCTGCTGTaGTCAGTGAAGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSLGYLL*SVKPTP
Trigger: TGGTGTCGGCTTCACTGACCACAGCAGGTACCCCAG...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACTGGGGTACCTGCTGTaGTCAGTGAAGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTELGYLL*SVKPTP
Trigger: TGGTGTCGGCTTCACTGACCACAGCAGGTACCCCAG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGGAGCAGGCGGTGTCTaGACCAAGGGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEGAGGV*TKGRRA
Trigger: AGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAGAACCATCTCCGAGGTaGGAGCAGGCGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQEPSPR*EQAVSG
Trigger: TCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTC...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WSHRYTSITSPSLLITLTHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPRGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKANLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTTTGACGGAGTCTCTTaGGCAGATGGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSFDGVS*ADGRGL
Trigger: AAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAA...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTTGACGGAGTCTCTTaGGCAGATGGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFDGVS*ADGRGL
Trigger: AAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAAAGAGTCCCCAGGCTaGTGGAATGGGCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDKESPG*WNGPWF
Trigger: AAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGCAGGCTGGAGTGCAATaGCACGATCTCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAQAGVQ*HDLGSP
Trigger: TGGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTG...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACAGGCTGGATTGCAATaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEQAGLQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCATTGCAATCCAGCCTG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCCAGGTCCAGCTGCTaGTTTCAGATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPRSSC*FQIKID
Trigger: GTCAATTTTGATCTGAAACCAGCAGCTGGACCTGGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGAGGTGGGTGGCATCTTaGGACTCTCTCCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGRWVAS*DSLQAF
Trigger: GAAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCT...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTCTGTGGCGAGGGATTaGGGAAGGTGGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKASVARD*GRWVAS
Trigger: AGATGCCACCCACCTTCCCCAATCCCTCGCCACAGA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCTTGTCTGCTAGCCTaGAGTATACATGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPCLLA*SIHESL
Trigger: CAGTGACTCATGTATACTCCAGGCTAGCAGACAAGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAGACCACACGTGTGGTaGCTTTGGCAACCAGAAATT +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALRPHVW*LWQPEI
Trigger: AATTTCTGGTTGCCAAAGCCACCACACGTGTGGTCT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 72 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAGTCTCTTGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: WSHRYTSITSPS*LITLTESLGQM
Trigger: CATCTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
3UTR CAA 72 bp CTGGTGGGAAATGAAGGAGAGGGGCCTACAAGGCTCTaGTTCAGAGGGAGTCTGCATGAGAAAGTACAGGTA +
Preference number: 4 (lower is better)
Translates to: LVGNEGEGPTRL*FRGSLHEKVQV
Trigger: TACCTGTACTTTCTCATGCAGACTCCCTCTGAACAAGAGCCTTGTAGGCCCCTCTCCTTCATTTCCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCTGCTACTATCGAATaGGACAACATGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPATIE*DNMSLQ
Trigger: TTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAAAGATGCCCCACACTaGTTACACTGGAATGGGCGT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYKDAPH*LHWNGR
Trigger: ACGCCCATTCCAGTGTAATCAGTGTGGGGCATCTTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAAAGATGCCCCACACTaGTTACACTGGAATGGGCGT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDKDAPH*LHWNGR
Trigger: ACGCCCATTCCAGTGTAATCAGTGTGGGGCATCTTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILPGSVL*RNVRQR
Trigger: GCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGG...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGRWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCTCCTCTGGCTATGTaGGACGAGAACTCATACCGA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSPLAM*DENSYR
Trigger: TCGGTATGAGTTCTCGTCTCACATAGCCAGAGGAGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACTGGTCTCGAACTCCTaGCCTCAAATGATGCGCCTG +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRLVSNS*PQMMRL
Trigger: CAGGCGCATCATTTGAGGTCAGGAGTTCGAGACCAG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACTGGTCTCGAACTCCTaGCCTCAAATGATGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTELVSNS*PQMMRL
Trigger: CAGGCGCATCATTTGAGGTCAGGAGTTCGAGACCAG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGGTGGGCAGATTGCTTaGGCCCAGGATTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGGGQIA*AQDFET
Trigger: AGTCTCAAAATCCTGGGCTCAAGCAATCTGCCCACC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTTTGCCAAAGAAATCTaGGGTTGTGGCTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPFAKEI*GCGWAQ
Trigger: CTGCGCCCAGCCACAACCTCAGATTTCTTTGGCAAA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCACAAGTCCCGATGCTaGCTCTTTGAGTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDHKSRC*LFESSD
Trigger: ATCTGAGGACTCAAAGAGTCAGCATCGGGACTTGTG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTCCCTTTTCTCTTCTTaGGCTCACAAGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRSLFSS*AHKSRC
Trigger: GCATCGGGACTTGTGAGCTCAAGAAGAGAAAAGGGA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAACAGAGTCCTTTTCCTaGGGTGGCCCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKTESFS*GGPGPA
Trigger: AGCTGGACCTGGGCCACCTCAGGAAAAGGACTCTGT...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACTGGGTGCGACACCATaGAGTGTCTATAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRLGATP*SVYSTW
Trigger: CCACGTGCTATAGACACTTCATGGTGTCGCACCCAG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACTGGGTGCGACACCATaGAGTGTCTATAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTELGATP*SVYSTW
Trigger: CCACGTGCTATAGACACTTCATGGTGTCGCACCCAG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGGTCATTCAAAACCGCTaGACTTTCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: WSHRYTSITSPSLLITLTVIQNR*TFCGHR
Trigger: TCTGTGCCCGCAGAAAGTGCAGCGGTTTTGAATGAC...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGAATGTGTCCTAAGATaGCCCGTGAGCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYECVLR*PVSASL
Trigger: AAGAGATGCGCTCACGGGGCATCTTAGGACACATTC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFEVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYEVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACTCTCCACGTGCTCCTaGCGTCGCCTGGACTCAGCG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELSTCS*RRLDSA
Trigger: CGCTGAGTCCAGGCGACGGCAGGAGCACGTGGAGAG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYCFDVS*LRTCSV
Trigger: GACACTGCAAGTGCGGAGGCAAGACACATCAAAGCA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
CDS-3UTR GCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTCACAATCTTGAGATaGAAAAGGTGGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKFTILR*KRWSQA
Trigger: AGCCTGAGACCACCTTTTGCATCTCAAGATTGTGAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGCTGGGCATTGTTTGTaGATGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRAGHCL*MPVIPA
Trigger: AGCTGGGATTACAGGCATGCACAAACAATGCCCAGC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGCTGGGCATTGTTTGTaGATGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYAGHCL*MPVIPA
Trigger: AGCTGGGATTACAGGCATGCACAAACAATGCCCAGC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGGTCAGCAGATCCTCTaGCCTTGTGCATTAAAACAA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALGQQIL*PCALKQ
Trigger: TTGTTTTAATGCACAAGGGCAGAGGATCTGCTGACC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELELPL*LLGLST
Trigger: CGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAGTACCAGTGTCCCCTaGGTCAGTGCTCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRSTSVP*VSALKK
Trigger: TTTCTTCAGAGCACTGACCCAGGGGACACTGGTACT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623724.3
CDS-3UTR CCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTCTGGGGTACCTGCTGTaGTCAGTGAAGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGLGYLL*SVKPTP
Trigger: TGGTGTCGGCTTCACTGACCACAGCAGGTACCCCAG...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTGCTCAGATTCTTGCCTaGGGTACCTGCTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSAQILA*GTCCGQ
Trigger: CTGACCACAGCAGGTACCCCAGGCAAGAATCTGAGC...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGAACCATCTCCGAGGTaGGAGCAGGCGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYEPSPR*EQAVSG
Trigger: TCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTERGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATTTGACGGAGTCTCTTaGGCAGATGGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKFDGVS*ADGRGL
Trigger: AAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATACTTGCAGTGTCCCCTaGGTCAGTGCTCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYTCSVP*VSALKK
Trigger: TTTCTTCAGAGCACTGACCCAGGGGACACTGCAAGT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTTGAGATGCAAAAGGTaGTCTCAGGCTGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPLRCKR*SQAGCG
Trigger: ACCGCACCCAGCCTGAGACCACCTTTTGCATCTCAA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTTCAGTGCCCAGCAGTaGCAGATGCAAGTCCTGACT +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGFSAQQ*QMQVLT
Trigger: AGTCAGGACTTGCATCTGCCACTGCTGGGCACTGAA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTGTTCCTCAGACCGTaGCCTCCTGGGTGTATGGTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTELFLRP*PPGCMV
Trigger: CACCATACACCCAGGAGGCCACGGTCTGAGGAACAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGCCCGGCCCTTTGCATaGGTTTGGTTGTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRARPFA*VWLFLR
Trigger: TCTGAGGAACAACCAAACCCATGCAAAGGGCCGGGC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAAACATTTGGAGAGCTaGGCATTGTTTGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALKHLES*ALFVHA
Trigger: GGCATGCACAAACAATGCCCAGCTCTCCAAATGTTT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGTCCTTTTCCTGAGGTaGCCCAGGTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFVLFLR*PRSSCW
Trigger: CCAGCAGCTGGACCTGGGCCACCTCAGGAAAAGGAC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAAGACTATCTACAGCTaGGGCAAGGGAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPKTIYS*GKGEAQ
Trigger: CTGTGCCTCTCCCTTGCCCCAGCTGTAGATAGTCTT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGTGTCTATAGCACGTaGTTAGCTCACGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSVYST*LAHAGS
Trigger: GGAACCAGCGTGAGCTAACCACGTGCTATAGACACT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATCTCTCCAGGCTTTCTaGAGTGGGGTCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTESLQAF*SGVSGE
Trigger: CTCTCCACTGACCCCACTCCAGAAAGCCTGGAGAGA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAGGTGGGTGGCATCTTaGGACTCTCTCCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTERWVAS*DSLQAF
Trigger: GAAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATATAGACACAGATCTGTaGCGAGGGATTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYIDTDL*RGIGEG
Trigger: ACCTTCCCCAATCCCTCGCCACAGATCTGTGTCTAT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAAGGGAAAGTCACCACTaGGCAGGGAGGGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRRESHH*AGRAFL
Trigger: CAGAAATGCCCTCCCTGCCCAGTGGTGACTTTCCCT...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 72 bp CATCCCATTGCGGGCCCGAGACAGGACCATGTGATTTaGCTGATAGATGTGATTCTGGCGTTCTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: HPIAGPRQDHVI*LIDVILAFFMV
Trigger: AACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDRRLPF*VKDAPH
Trigger: GTGTGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRRRLPF*VKDAPH
Trigger: GTGTGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYPGSVL*RNVRQR
Trigger: GCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFPGSVL*RNVRQR
Trigger: GCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCACCTGCTGTGGTCAGTaGAGCCGACACCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGTCCGQ*SRHQGT
Trigger: TGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYTSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTGAGGGGCACCGTTTaGCATCTCAGCCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLRGTV*HLSPGE
Trigger: CTCACCCGGGCTGAGATGTCAAACGGTGCCCCTCAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGREFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGATAGGAAATGGATCTaGTGCTTGGAGAATGGGGTC +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRDRKWI*CLENGV
Trigger: GACCCCATTCTCCAAGCATCAGATCCATTTCCTATC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGGTCGAGGCTGCACTaGGCCATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFRSRLH*AMIAPL
Trigger: CAGTGGTGCAATCATGGCTCAGTGCAGCCTCGACCT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGAGGCTGAGGCGGGCTaGTTGCTTGAGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEEAEAG*LLEPRS
Trigger: ACTCCTGGGCTCAAGCAATCAGCCCGCCTCAGCCTC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTTGGTTTCACAATCTTaGGATGCAAAAGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALLVSQS*DAKGGL
Trigger: GAGACCACCTTTTGCATCTCAAGATTGTGAAACCAA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGGTGGGCAGATTGCTTaGGCCCAGGATTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRGGQIA*AQDFET
Trigger: AGTCTCAAAATCCTGGGCTCAAGCAATCTGCCCACC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGAAGGGTCAGGAGTCCTaGACCCTGGCTTATTCTCAG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAKGQES*TLAYSQ
Trigger: CTGAGAATAAGCCAGGGTTCAGGACTCCTGACCCTT...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAGCGGCAAGTAAGCCTTaGTTGTGCCACTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKAASKP*LCHCTQ
Trigger: CTGAGTGCAGTGGCACAATCAAGGCTTACTTGCCGC...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAAACCACAGTCTGGGTaGAGGGATGTCTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYKPQSG*RDVCFV
Trigger: TACAAAGCAGACATCCCTTCACCCAGACTGTGGTTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCATAGACTGAGAACCTaGGCATGCAAAACCACAGTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDHRLRT*ACKTTV
Trigger: GACTGTGGTTTTGCATGCTCAGGTTCTCAGTCTATG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATATCTTCCATGTCGCTaGCGGGCCGGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEYLPCR*RAGLEL
Trigger: CAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCGGCAGCGCTCCTTGTaGTCCTCAAGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFRQRSL*SSRELL
Trigger: GAGAAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCGGCAGCGCTCCTTGTaGTCCTCAAGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRQRSL*SSRELL
Trigger: GAGAAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGGCACATTCAAATCTTaGAGTCTTATGCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: HCGPETGPCDFADRCDSGGTFKS*SLMPRW
Trigger: CCATCTCGGCATAAGACTGCAAGATTTGAATGTGCC...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGAAGTGGCATCCCATTaGGGGCCCGAGACAGGACCA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGEVASH*GPETGP
Trigger: TGGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTTTGTTTTCTGTTGGTaGTGCCAAACAATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALFVFCW*CQTISP
Trigger: GGGGGAAATTGTTTGGCAGCACCAACAGAAAACAAA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAAAAGGGCCGAAGCCTaGCTGATCAAGGAGAACCTC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEKRAEA*LIKENL
Trigger: GAGGTTCTCCTTGATCAGGCAGGCTTCGGCCCTTTT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCTTGCCTCCGCACTTaGAGAATGTGTCCTAAGATG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSCLRT*RMCPKM
Trigger: CATCTTAGGACACATTCTGCAAGTGCGGAGGCAAGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439167.6
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCTTGCCTCCGCACTTaGTCCTATGTCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSCLRT*SYVFIF
Trigger: GAAGATGAAGACATAGGAGCAAGTGCGGAGGCAAGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCTGGGGTACCTGCTGTaGTCAGTGAAGCCGACACCA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLGYLL*SVKPTP
Trigger: TGGTGTCGGCTTCACTGACCACAGCAGGTACCCCAG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGAACCATCTCCGAGGTaGGAGCAGGCGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGEPSPR*EQAVSG
Trigger: TCCAGACACCGCCTGCTCCCACCTCGGAGATGGTTC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILRGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: PRQDHVILLIDVILAFFMCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYNLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTTGACGGAGTCTCTTaGGCAGATGGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFDGVS*ADGRGL
Trigger: AAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCTCTGTGTTCTCCTCTaGCTATGTGAGACGAGAACT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLCVLL*LCETRT
Trigger: AGTTCTCGTCTCACATAGCCAGAGGAGAACACAGAG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTTGGCAAATTTGCTTTaGGTCTGTATCACCAATTCT +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGRELANLL*VCITNS
Trigger: AGAATTGGTGATACAGACCCAAAGCAAATTTGCCAA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACTCCTGGGTGTATGGTaGAAAGCCCGCCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRLLGVW*KARLIR
Trigger: TCTTATCAGGCGGGCTTTCCACCATACACCCAGGAG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACCCTTTGCATGGGTTTaGTTGTTCCTCAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEPFAWV*LFLRPW
Trigger: CCACGGTCTGAGGAACAACCAAACCCATGCAAAGGG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGCCCTTTGCATGGGTTTaGTTGTTCCTCAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAPFAWV*LFLRPW
Trigger: CCACGGTCTGAGGAACAACCAAACCCATGCAAAGGG...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTGGTTAGCTCACGCTaGTTCCAAGGGTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVVSSR*FQGSAD
Trigger: ATCTGCTGACCCTTGGAACCAGCGTGAGCTAACCAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCTGATTACACTGGAATaGGCGTTCACCTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDLITLE*AFTSYV
Trigger: GACATAGGAGGTGAACGCCCATTCCAGTGTAATCAG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377958.6
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCCTGCTACTATCGAATaGGACAACATGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYPATIE*DNMSLQ
Trigger: TTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGTATGGCTTCGCTTATaGACCATTAAGACATTGAAG +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALVWLRL*TIKTLK
Trigger: CTTCAATGTCTTAATGGTTCATAAGCGAAGCCATAC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAAAGATGCCCCACACTaGTTACACTGGAATGGGCGT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEKDAPH*LHWNGR
Trigger: ACGCCCATTCCAGTGTAATCAGTGTGGGGCATCTTT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPRRLPF*VKDAPH
Trigger: GTGTGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATCTCCTCTGGCTATGTaGGACGAGAACTCATACCGA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTESPLAM*DENSYR
Trigger: TCGGTATGAGTTCTCGTCTCACATAGCCAGAGGAGA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCATAGGAGCAATCCCTaGGACCAGATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDHRSNP*DQIFTS
Trigger: TGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCATAGGAGCAATCCCTaGGACCAGATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYHRSNP*DQIFTS
Trigger: TGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: HCGPETGPCDFADRCDSGELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTAGCCAGCATTTTGTaGCCTCCTATTCCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDLASIL*PPIPVL
Trigger: TAGCACTGGAATAGGAGGTCACAAAATGCTGGCTAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCTGCATAATCACATATaGATTAAAGCTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLHNHI*IKARRD
Trigger: GTCCCTTCTAGCTTTAATTCATATGTGATTATGCAG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCACAGAGTCCTTTTCCTaGGGTGGCCCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGTESFS*GGPGPA
Trigger: AGCTGGACCTGGGCCACCTCAGGAAAAGGACTCTGT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTCATTCAAAACCGCTaGACTTTCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PRQDHVILLIDVILAFFMVIQNR*TFCGHR
Trigger: TCTGTGCCCGCAGAAAGTGCAGCGGTTTTGAATGAC...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTCATTCAAAACCGCTaGACTTTCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVIQNR*TFCGHR
Trigger: TCTGTGCCCGCAGAAAGTGCAGCGGTTTTGAATGAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCCACTGGTTGGCCTaGTACTATCGAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFHWLA*YYRMRQ
Trigger: TTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTGAATGTGTCCTAAGATaGCCCGTGAGCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSECVLR*PVSASL
Trigger: AAGAGATGCGCTCACGGGGCATCTTAGGACACATTC...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293068.9
CDS-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGAATGTGTCCTAAGATaGCCCGTGAGCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRECVLR*PVSASL
Trigger: AAGAGATGCGCTCACGGGGCATCTTAGGACACATTC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGAATGTGTCCTAAGATaGCCCGTGAGCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEECVLR*PVSASL
Trigger: AAGAGATGCGCTCACGGGGCATCTTAGGACACATTC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGAATGTGTCCTAAGATaGCCCGTGAGCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAECVLR*PVSASL
Trigger: AAGAGATGCGCTCACGGGGCATCTTAGGACACATTC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGAATCTTGCAGTCTTATaGCGAGATGGGAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: WSHRYTSITSPSLLITLTNLAVL*RDGKAR
Trigger: TCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATT...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAATCTTGCAGTCTTATaGCGAGATGGGAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYNLAVL*RDGKAR
Trigger: TCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGGCACATTCAAATCTTaGAGTCTTATGCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYGTFKS*SLMPRW
Trigger: CCATCTCGGCATAAGACTGCAAGATTTGAATGTGCC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTCTTGCCTCCGCACTTaGTGTTATAACTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSCLRT*CYNCSD
Trigger: ATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGGGATTACAGGCATGTaGCACTACTGCCCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAGITGM*HYCPAN
Trigger: ATTAGCTGGGCAGTAGTGGCACATGCCTGTAATCCC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGCTCCAGGGCTTCAGTaGCCAGCAGTGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEAPGLQ*PAVADA
Trigger: TGCATCTGCCACTGCTGGGCACTGAAGCCCTGGAGC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTGGCCCAGGTCCAGCTaGTGGTTTCAGATCAAAATT +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPWPRSS*WFQIKI
Trigger: AATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCTTCTGCATTTCCCATaGGTTCTGACTTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKLLHFP*VLTLKH
Trigger: ATGTTTTAAAGTCAGAACCCATGGGAAATGCAGAAG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGTTCATCTTTCCACTaGTTGGCCTGCTACTATCGA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSSSFH*LACYYR
Trigger: TCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTAGTACCAGTGTCCCCTaGGTCAGTGCTCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSSTSVP*VSALKK
Trigger: TTTCTTCAGAGCACTGACCCAGGGGACACTGGTACT...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTAGTCTTATGCCGAGATaGGAAAGCTCGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGSLMPR*ESSTHP
Trigger: GGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACT...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFRGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGTTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: PRQDHVILLIDVILAFFMFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGNLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTTGACGGAGTCTCTTaGGCAGATGGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFDGVS*ADGRGL
Trigger: AAGCCCCCGCCCATCTGCCCAAGAGACTCCGTCAAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAAATGTAGCCAGACATaGTGGTGTGCACTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDKCSQT*WCALVV
Trigger: GACAACAAGTGCACACCACCATGTCTGGCTACATTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGTTGGGACTGTTGCCATaGAATTTCATAAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: LQVELHRSDEGKSPLGRELGLLP*NFIKPF
Trigger: AAAAGGTTTTATGAAATTCCATGGCAACAGTCCCAA...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTGGTGGAATGGGCCTTaGTTTCACAATCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRWWNGP*FHNLEM
Trigger: CATCTCAAGATTGTGAAACCAAGGCCCATTCCACCA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACCCAGGCTGGTGGAATaGGCCTTGGTTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQPRLVE*ALVSQS
Trigger: AGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGCCTCCTGGGTGTATaGTGGAAAGCCCGCCTGATA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGLLGV*WKARLI
Trigger: TATCAGGCGGGCTTTCCACCATACACCCAGGAGGCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAAACATTTGGAGAGCTaGGCATTGTTTGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYKHLES*ALFVHA
Trigger: GGCATGCACAAACAATGCCCAGCTCTCCAAATGTTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGGCGAATGTCTTTTTaGGAGAATAACTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKRRMSF*ENNLRK
Trigger: TTTCCTCAAGTTATTCTCCCAAAAAGACATTCGCCT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAGCATAAGATTAGCTaGCTTATCTGTGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRKHKIS*LICAKA
Trigger: CGCCTTGGCACAGATAAGCCAGCTAATCTTATGCTT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGAGGTCATTTTATATCTaGCCGATTTTGAGTATGGGC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALRSFYI*PILSMG
Trigger: GCCCATACTCAAAATCGGCCAGATATAAAATGACCT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAATTTTGAGACTAGCCTaGGCAGTATGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEILRLA*AVWRNA
Trigger: GGCGTTTCGCCATACTGCCCAGGCTAGTCTCAAAAT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATCAGTCGTGCTGCCTTaGAGAACAGAGTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRSVVLP*RTESFS
Trigger: GGAAAAGGACTCTGTTCTCCAAGGCAGCACGACTGA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAGGAGTCCTGAACCCTaGCTTATTCTCAGAACCATT +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRRSPEP*LILRTI
Trigger: AATGGTTCTGAGAATAAGCCAGGGTTCAGGACTCCT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: WSHRYTSITSPSLLITLTEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTESCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAACATCTCAGCCCGGGTaGGGGCTATGGGATACATGC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACETSQPG*GLWDTC
Trigger: GCATGTATCCCATAGCCCTCACCCGGGCTGAGATGT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGATGGGCGGGGGCTTaGGGAGTTCGTAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAERWAGA*GVRKSG
Trigger: CCCGCTCTTACGAACTCCTCAAGCCCCCGCCCATCT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTCCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAACCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGATAGGAAATGGATCTaGTGCTTGGAGAATGGGGTC +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKADRKWI*CLENGV
Trigger: GACCCCATTCTCCAAGCATCAGATCCATTTCCTATC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTGGTTTCACAATCTTaGGATGCAAAAGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLVSQS*DAKGGL
Trigger: GAGACCACCTTTTGCATCTCAAGATTGTGAAACCAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGCAGATGCAAGTCCTaGCTCTGCCCTTCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGRCKS*LCPSAK
Trigger: CTTAGCAGAAGGGCAGAGTCAGGACTTGCATCTGCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAGTACAGGTACTATCTaGAGCTGCTCCAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQSTGTI*SCSRAS
Trigger: TGAAGCCCTGGAGCAGCTTCAGATAGTACCTGTACT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCCATTCTCTAAAAGATaGGGTATCACTATATATCGG +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALPFSKR*GITIYR
Trigger: CCGATATATAGTGATACCTCATCTTTTAGAGAATGG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGCGGCAAGTAAGCCTTaGTTGTGCCACTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGAASKP*LCHCTQ
Trigger: CTGAGTGCAGTGGCACAATCAAGGCTTACTTGCCGC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGGGGTACTAATGGCTaGGGACTCACAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYWGTNG*GLTDSE
Trigger: CTCACTGTCTGTGAGTCCTCAGCCATTAGTACCCCA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATATCTTTCACTTTCATTaGATCATCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYIFHFH*IICGHR
Trigger: TCTGTGCCCGCAGATGATTCAATGAAAGTGAAAGAT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439167.6
ENST00000535189.5
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACGGCAGCGCTCCTTGTaGTCCTCAAGGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACERQRSL*SSRELL
Trigger: GAGAAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFCPLGQ*SEEMYG
Trigger: GCCGTACATTTCTTCAGAGCACTGACCCAGGGGACA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp TACATAGGAGCAATCCCTGAGACCAGATATTCACTTCAGCAGGGCTCTGTGTTCTCTTGCCTCCGCACTTaGTGTTATAACTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: YIGAIPETRYSLQQGSVFSCLRT*CYNCSD
Trigger: ATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGA...GAACACAGAGCCCTGCTGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTGCTTTGATGTGTCTTaGCTCCGCACTTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPCFDVS*LRTCCY
Trigger: ATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACCCCCTTTATACCCTTaGTCTGCCAACCTTGACCAA +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQPPLYP*SANLDQ
Trigger: TTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGTTTTCTGTTGGTGCTaGCAAACAATTTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRVFCWC*QTISPF
Trigger: AAAGGGGGAAATTGTTTGGCAGCACCAACAGAAAAC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAGGGATTACAGGCATGTaGCACTACTGCCCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQGITGM*HYCPAN
Trigger: ATTAGCTGGGCAGTAGTGGCACATGCCTGTAATCCC...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACTTAAGCGATTTTTCTaGCTCAGCCTCCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQLKRFF*LSLRSS
Trigger: GCTACTCCGGAGGCTGAGGCAGAAAAATCGCTTAAG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGCAAACAGCTGCATGTaGCAATTTGTGTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDANSCM*QFVCML
Trigger: AAGCATACACACAAATTGGCACATGCAGCTGTTTGC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGGCAAACAGCTGCATGTaGCAATTTGTGTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRANSCM*QFVCML
Trigger: AAGCATACACACAAATTGGCACATGCAGCTGTTTGC...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTCTTCTACTAATCCCTaGTTCCAAATTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALSSTNP*FQILFL
Trigger: GAGAAAGAGAATTTGGAAGCAGGGATTAGTAGAAGA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCACAATCTTGAGATaGAAAAGGTGGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFTILR*KRWSQA
Trigger: AGCCTGAGACCACCTTTTGCATCTCAAGATTGTGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAACCATTCAGTCGTGCTaGCTTGGAGAACAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKTIQSC*LGEQSP
Trigger: AGGACTCTGTTCTCCAAGGCAGCACGACTGAATGGT...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAGAACCATTCAGTCGTaGTGCCTTGGAGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTERTIQS*CLGEQS
Trigger: ACTCTGTTCTCCAAGGCAGCACGACTGAATGGTTCT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGACCTTCCTCGTCATTCTaGAGACAATGGTCATCCACA +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRPSSSF*RQWSST
Trigger: TGTGGATGACCATTGTCTGCAGAATGACGAGGAAGG...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGAGTTCATCTTTCCACTaGTTGGCCTGCTACTATCGA +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGSSSFH*LACYYR
Trigger: TCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACT...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGTCTTATGCCGAGATaGGAAAGCTCGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSLMPR*ESSTHP
Trigger: GGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGCTCAGATTCTTGCCTaGGGTACCTGCTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGAQILA*GTCCGQ
Trigger: CTGACCACAGCAGGTACCCCAGGCAAGAATCTGAGC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGRGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFCCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAACCTCCTTCAGAAGTaGCATCCCATTGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACENLLQK*HPIAGP
Trigger: CGGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAAGAGGACGCGGCAGTaGTCACACCGATACACATCC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGKRTRQ*SHRYTS
Trigger: GGATGTGTATCGGTGTGACCACTGCCGCGTCCTCTT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAGCTCAGCTTTTCACTaGAGATGGGAAGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPSSAFH*RWEGKG
Trigger: TCCTTTACCTTCCCATCTCCAGTGAAAAGCTGAGCT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGAGTCCCCAGGCTGGTaGAATGGGCCTTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEESPGW*NGPWFH
Trigger: GTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTCAGTGCCCAGCAGTaGCAGATGCAAGTCCTGACT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFSAQQ*QMQVLT
Trigger: AGTCAGGACTTGCATCTGCCACTGCTGGGCACTGAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATCAGTCGTGCTGCCTTaGAGAACAGAGTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQSVVLP*RTESFS
Trigger: GGAAAAGGACTCTGTTCTCCAAGGCAGCACGACTGA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGCCTTGTCTGCTAGCCTaGAGTATACATGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAPCLLA*SIHESL
Trigger: CAGTGACTCATGTATACTCCAGGCTAGCAGACAAGG...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTCCTGCTACTATCGAATaGGACAACATGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSPATIE*DNMSLQ
Trigger: TTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGG...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGTATGGCTTCGCTTATaGACCATTAAGACATTGAAG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDVWLRL*TIKTLK
Trigger: CTTCAATGTCTTAATGGTTCATAAGCGAAGCCATAC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAAAGATGCCCCACACTaGTTACACTGGAATGGGCGT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYKDAPH*LHWNGR
Trigger: ACGCCCATTCCAGTGTAATCAGTGTGGGGCATCTTT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRRRLPF*VKDAPH
Trigger: GTGTGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293068.9
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFPSLL*CVLPPH
Trigger: GTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCTCCTCTGGCTATGTaGGACGAGAACTCATACCGA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSPLAM*DENSYR
Trigger: TCGGTATGAGTTCTCGTCTCACATAGCCAGAGGAGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTCATAGGAGCAATCCCTaGGACCAGATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSHRSNP*DQIFTS
Trigger: TGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATG...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp TACATAGGAGCAATCCCTGAGACCAGATATTCACTTCAGCAGGGCTCTGTGTTCGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: YIGAIPETRYSLQQGSVFELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...GAACACAGAGCCCTGCTGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACCTGCGAATAATTTCTaGAGGAAGACAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEPANNF*RKTVFP
Trigger: GGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: HCGPETGPCDFADRCDSGFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTTAGCCAGCATTTTGTaGCCTCCTATTCCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKALASIL*PPIPVL
Trigger: TAGCACTGGAATAGGAGGTCACAAAATGCTGGCTAA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCCCTTTTCTCTTCTTaGGCTCACAAGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSLFSS*AHKSRC
Trigger: GCATCGGGACTTGTGAGCTCAAGAAGAGAAAAGGGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTCCACTGGTTGGCCTaGTACTATCGAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFHWLA*YYRMRQ
Trigger: TTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGAATGTGTCCTAAGATaGCCCGTGAGCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFECVLR*PVSASL
Trigger: AAGAGATGCGCTCACGGGGCATCTTAGGACACATTC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAACTGCTCAGATTCTTaGCTGGGGTACCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGNCSDS*LGYLLW
Trigger: CCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYCFDVS*LRTCSV
Trigger: GACACTGCAAGTGCGGAGGCAAGACACATCAAAGCA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCCCCCTTTATACCCTTaGTCTGCCAACCTTGACCAA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYPPLYP*SANLDQ
Trigger: TTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCTTAAGCGATTTTTCTaGCTCAGCCTCCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLKRFF*LSLRSS
Trigger: GCTACTCCGGAGGCTGAGGCAGAAAAATCGCTTAAG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAGCTCCAGGGCTTCAGTaGCCAGCAGTGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEAPGLQ*PAVADA
Trigger: TGCATCTGCCACTGCTGGGCACTGAAGCCCTGGAGC...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATGTTCAGAGGGAGTCTaGATGAGAAAGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRCSEGV*MRKYRY
Trigger: GTACCTGTACTTTCTCATGCAGACTCCCTCTGAACA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAACGTAGGAAGTACCGATaGAACACTTCAGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKRRKYR*NTSGSD
Trigger: GTCACTACCTGAAGTGTTGCATCGGTACTTCCTACG...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAGAACCATTCAGTCGTaGTGCCTTGGAGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQRTIQS*CLGEQS
Trigger: ACTCTGTTCTCCAAGGCAGCACGACTGAATGGTTCT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATTTGACTTCCCTGGGTaGGACACCATGAAGTGTCTA +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKFDFPG*DTMKCL
Trigger: TAGACACTTCATGGTGTCGCACCCAGGGAAGTCAAA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTCTGATTACACTGGAATaGGCGTTCACCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILLITLE*AFTSMA
Trigger: AGCCATACTGGTGAACGCCCATTCCAGTGTAATCAG...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293068.9
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACTGATTACACTGGAATaGGCGTTCACCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQLITLE*AFTSMA
Trigger: AGCCATACTGGTGAACGCCCATTCCAGTGTAATCAG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAGTCTTATGCCGAGATaGGAAAGCTCGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSLMPR*ESSTHP
Trigger: GGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCATGCTGCTGATAACTaGAACCATCTCCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGHAADN*NHLRGG
Trigger: CCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACGTGGCCACTATTGTTaGGAGAGAGGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACERGHYC*ERGLSQ
Trigger: CTGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGTGTCCGTGGAGTCGTaGCCACTATTGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEVSVES*PLLLGE
Trigger: CTCTCCCAACAATAGTGGCCACGACTCCACGGACAC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCCCAGCAAGGTCAGCTaGTCAGCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGPSKVS*SALPLC
Trigger: ACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTACTTGCAGTGTCCCCTaGGTCAGTGCTCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFTCSVP*VSALKK
Trigger: TTTCTTCAGAGCACTGACCCAGGGGACACTGCAAGT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTCTTCTATAGACAACTaGTTTAGCCCAAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPSSIDN*FSPKQL
Trigger: GAGCTGCTTTGGGCTAAACCAGTTGTCTATAGAAGA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTGTGGAAAATATCATTaGCAAATTTGCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PRHSADNGHPQTTRVVALCGKYH*QICFGS
Trigger: AGACCCAAAGCAAATTTGCCAATGATATTTTCCACA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCAATCTGGCATAGCTTaGAGTCTAGTATTACGGAAA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYQSGIA*SLVLRK
Trigger: TTTCCGTAATACTAGACTCCAAGCTATGCCAGATTG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTGGTGGAATGGGCCTTaGTTTCACAATCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAWWNGP*FHNLEM
Trigger: CATCTCAAGATTGTGAAACCAAGGCCCATTCCACCA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGCCCGGCCCTTTGCATaGGTTTGGTTGTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEARPFA*VWLFLR
Trigger: TCTGAGGAACAACCAAACCCATGCAAAGGGCCGGGC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAAGCATAAGATTAGCTaGCTTATCTGTGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEKHKIS*LICAKA
Trigger: CGCCTTGGCACAGATAAGCCAGCTAATCTTATGCTT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGTGGTTAGCTCACGCTaGTTCCAAGGGTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGVVSSR*FQGSAD
Trigger: ATCTGCTGACCCTTGGAACCAGCGTGAGCTAACCAC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGTGTCTATAGCACGTaGTTAGCTCACGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSVYST*LAHAGS
Trigger: GGAACCAGCGTGAGCTAACCACGTGCTATAGACACT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCTCTCCAGGCTTTCTaGAGTGGGGTCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESLQAF*SGVSGE
Trigger: CTCTCCACTGACCCCACTCCAGAAAGCCTGGAGAGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGTATACATGAGTCACTaGCGGTGGGATCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRVYMSH*RWDQSF
Trigger: AAATGACTGATCCCACCGCCAGTGACTCATGTATAC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
3UTR CAA 72 bp GAGACAGACGCCATGCCACAAAGAAGGATAAGCCATTaGTGCAGTCTGAGGTGGAACATTTTAATTACTGGC +
Preference number: 4 (lower is better)
Translates to: ETDAMPQRRISH*CSLRWNILITG
Trigger: GCCAGTAATTAAAATGTTCCACCTCAGACTGCACAAATGGCTTATCCTTCTTTGTGGCATGGCGTCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACCTGCTACTATCGAATaGGACAACATGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQPATIE*DNMSLQ
Trigger: TTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAAAGATGCCCCACACTaGTTACACTGGAATGGGCGT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGKDAPH*LHWNGR
Trigger: ACGCCCATTCCAGTGTAATCAGTGTGGGGCATCTTT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRRLPF*VKDAPH
Trigger: GTGTGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGGGTCACGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: THTDHGFDIHTCYTRKGHEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...GTGACCCTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp TACATAGGAGCAATCCCTGAGACCAGATATTCACTTCAGCAGGGCTCTGTGTTCTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: YIGAIPETRYSLQQGSVFSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...GAACACAGAGCCCTGCTGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCTCCTCTGGCTATGTaGGACGAGAACTCATACCGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSPLAM*DENSYR
Trigger: TCGGTATGAGTTCTCGTCTCACATAGCCAGAGGAGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTCATAGGAGCAATCCCTaGGACCAGATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGHRSNP*DQIFTS
Trigger: TGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATG...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR TCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTTTCAGATCAAAATTaGCCTCCTTCATCGGCACTT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVSDQN*PPSSAL
Trigger: AAGTGCCGATGAAGGAGGTCAATTTTGATCTGAAAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGGCACTTACAGAGTGTaGGATAGACACAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYGTYRV*DRHRSV
Trigger: CACAGATCTGTGTCTATCTCACACTCTGTAAGTGCC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACCAAAGCTCATAGACTaGGAACCTGAGCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQPKLID*EPEHAK
Trigger: TTTTGCATGCTCAGGTTCTCAGTCTATGAGCTTTGG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGTCATTCAAAACCGCTaGACTTTCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGVIQNR*TFCGHR
Trigger: TCTGTGCCCGCAGAAAGTGCAGCGGTTTTGAATGAC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR GCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTTTCCACTGGTTGGCCTaGTACTATCGAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILFHWLA*YYRMRQ
Trigger: TTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAA...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTTGCTTTGATGTGTCTTaGCTCCGCACTTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRCFDVS*LRTCCY
Trigger: ATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCA...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTESLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGCFDVS*LRTCSV
Trigger: GACACTGCAAGTGCGGAGGCAAGACACATCAAAGCA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTTTTCTGTTGGTGCTaGCAAACAATTTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVFCWC*QTISPF
Trigger: AAAGGGGGAAATTGTTTGGCAGCACCAACAGAAAAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGCGATCTAAACACACATaGCATCTATCTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGRSKHT*HLSPIP
Trigger: AGGAATTGGAGATAGATGGCATGTGTGTTTAGATCG...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGGCATGTGCCACTACTaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEGMCHY*PANFCI
Trigger: AATACAAAAATTAGCTGGGCAGTAGTGGCACATGCC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAAGGATAAGCCATTTGTaGAGTCTGAGGTGGAACATT +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRRISHL*SLRWNI
Trigger: AATGTTCCACCTCAGACTGCACAAATGGCTTATCCT...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAAAGTTGGTCTCCTCTaGAAAGACTTGAACACTAAT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYKVGLL*KDLNTN
Trigger: ATTAGTGTTCAAGTCTTTGCAGAGGAGACCAACTTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAATCTAGGCTCAGAATaGCACAAAGAAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPNLGSE*HKESAF
Trigger: AAAGGCACTTTCTTTGTGGCATTCTGAGCCTAGATT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTGTGATGGTAACCACTaGATATCTGGTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPCDGNH*ISGSTS
Trigger: TGAAGTTGAACCAGATATGCAGTGGTTACCATCACA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAGGTCAGCAGATCCTCTaGCCTTGTGCATTAAAACAA +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQGQQIL*PCALKQ
Trigger: TTGTTTTAATGCACAAGGGCAGAGGATCTGCTGACC...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCCTTCCTCGTCATTCTaGAGACAATGGTCATCCACA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYPSSSF*RQWSST
Trigger: TGTGGATGACCATTGTCTGCAGAATGACGAGGAAGG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFCFDVS*LRTCRM
Trigger: CATTCTGCAAGTGCGGAGGCAAGACACATCAAAGCA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439167.6
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGCTTTGATGTGTCTTaGCTCCGCACTTGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYCFDVS*LRTCSY
Trigger: ATAGGAGCAAGTGCGGAGGCAAGACACATCAAAGCA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFIFIG*AFSTVH
Trigger: GTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCTTCTGCATTTCCCATaGGTTCTGACTTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLLHFP*VLTLKH
Trigger: ATGTTTTAAAGTCAGAACCCATGGGAAATGCAGAAG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGAGTTCATCTTTCCACTaGTTGGCCTGCTACTATCGA +
Preference number: 4 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKSSSFH*LACYYR
Trigger: TCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACT...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCTGATTACACTGGAATaGGCGTTCACCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLITLE*AFTSMA
Trigger: AGCCATACTGGTGAACGCCCATTCCAGTGTAATCAG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTELTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGCGTTATTGATGGCTTaGTCCATCATGCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGALLMA*SIMRVC
Trigger: ACAGACCCGCATGATGGACCAAGCCATCAATAACGC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATGCTGTCAGTGTCCGTaGAGTCGTGGCCACTATTGT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACECCQCP*SRGHYC
Trigger: ACAATAGTGGCCACGACTCCACGGACACTGACAGCA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: PRQDHVILLIDVILAFFMNSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTENSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCTCTGTGTTCTCCTCTaGCTATGTGAGACGAGAACT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLCVLL*LCETRT
Trigger: AGTTCTCGTCTCACATAGCCAGAGGAGAACACAGAG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTTAGGCGAGGTCATTaGTTTTTAGAAACGATGCTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVRRGH*FLETML
Trigger: CAGCATCGTTTCTAAAAACCAATGACCTCGCCTAAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTATAGACGAGTTGAGTTaGAGCCGAATGCATAAGCCC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFIDELS*SRMHKP
Trigger: GGGCTTATGCATTCGGCTCCAACTCAACTCGTCTAT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCAATCTGGCATAGCTTaGAGTCTAGTATTACGGAAA +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPQSGIA*SLVLRK
Trigger: TTTCCGTAATACTAGACTCCAAGCTATGCCAGATTG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTGACAGAAAACATTTaGAGAGCTGGGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVTENI*RAGHCL
Trigger: CAAACAATGCCCAGCTCTCCAAATGTTTTCTGTCAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGGCGAATGTCTTTTTaGGAGAATAACTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYRRMSF*ENNLRK
Trigger: TTTCCTCAAGTTATTCTCCCAAAAAGACATTCGCCT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGATACAGATGCTACCTaGAAAAACTTTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDDTDAT*KNFVLS
Trigger: AGACAGAACAAAGTTTTTCCAGGTAGCATCTGTATC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTGACATCAAAGCAGTaGCGCTTCTCACCAGTATGG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLTSKQ*RFSPVW
Trigger: CCATACTGGTGAGAAGCGCCACTGCTTTGATGTCAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377945.7
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTATGGCTTCGCTTATaGACCATTAAGACATTGAAG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVWLRL*TIKTLK
Trigger: CTTCAATGTCTTAATGGTTCATAAGCGAAGCCATAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTESPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCATGCGGGTCTGTATaGGCTCACTCTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSCGSV*AHSLSH
Trigger: ATGAGAAAGAGAGTGAGCTCATACAGACCCGCATGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTCTTTTCCAGCTCTTaGGGGGCACCGTTTGACATC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEFFSSS*GAPFDI
Trigger: GATGTCAAACGGTGCCCCTCAAGAGCTGGAAAAGAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCATAGGAGCAATCCCTaGGACCAGATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYHRSNP*DQIFTS
Trigger: TGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACCCTGGCTACCCCTGTaGACACAGCTAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEPWLPL*TQLKMV
Trigger: TACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCCTGCGAATAATTTCTaGAGGAAGACAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYPANNF*RKTVFP
Trigger: GGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCCTGCGAATAATTTCTaGAGGAAGACAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFPANNF*RKTVFP
Trigger: GGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTGCTCTGCCAACCTTaGCCAAAGGAAAGCGATGTC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELLCQP*PKESDV
Trigger: GACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAGGCAGATGCAAGTCCTaGCTCTGCCCTTCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEGRCKS*LCPSAK
Trigger: CTTAGCAGAAGGGCAGAGTCAGGACTTGCATCTGCC...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGCACTTACAGAGTGTaGGATAGACACAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGTYRV*DRHRSV
Trigger: CACAGATCTGTGTCTATCTCACACTCTGTAAGTGCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTGAGTAACTGCGTGTaGCACCTGCAGACTGATATA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLSNCV*HLQTDI
Trigger: TATATCAGTCTGCAGGTGTCACACGCAGTTACTCAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583368.1
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGQTAPE*FSVPHL
Trigger: CAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGGCACATTCAAATCTTaGAGTCTTATGCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFGTFKS*SLMPRW
Trigger: CCATCTCGGCATAAGACTGCAAGATTTGAATGTGCC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCTTGCCTCCGCACTTaGTGTTATAACTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSCLRT*CYNCSD
Trigger: ATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGCTTTGATGTGTCTTaGCTCCGCACTTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYCFDVS*LRTCCY
Trigger: ATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCGTAGGAAGTACCGATaGAACACTTCAGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGRRKYR*NTSGSD
Trigger: GTCACTACCTGAAGTGTTGCATCGGTACTTCCTACG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTGGCCCAGGTCCAGCTaGTGGTTTCAGATCAAAATT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGWPRSS*WFQIKI
Trigger: AATTTTGATCTGAAACCAGCAGCTGGACCTGGGCCA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACATAGGAGCAATCCCTGAGACCAGATATTCACTTCAGCAGGGCTCTGTGTTCCTTCTGCATTTCCCATaGGTTCTGACTTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: YIGAIPETRYSLQQGSVFLLHFP*VLTLKH
Trigger: ATGTTTTAAAGTCAGAACCCATGGGAAATGCAGAAG...GAACACAGAGCCCTGCTGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGTTCATCTTTCCACTaGTTGGCCTGCTACTATCGA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSSSFH*LACYYR
Trigger: TCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: SALMCLASALAVITAQILLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTCTGTGTTCTCCTCTaGCTATGTGAGACGAGAACT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLCVLL*LCETRT
Trigger: AGTTCTCGTCTCACATAGCCAGAGGAGAACACAGAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAACTTGCAGTGTCCCCTaGGTCAGTGCTCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACETCSVP*VSALKK
Trigger: TTTCTTCAGAGCACTGACCCAGGGGACACTGCAAGT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGCTCAGCTTTTCACTaGAGATGGGAAGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSSAFH*RWEGKG
Trigger: TCCTTTACCTTCCCATCTCCAGTGAAAAGCTGAGCT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCAGTGGATAAATTTCTaGAGTTTCGATGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPQWINF*SFDDGL
Trigger: TAGACCATCATCGAAACTCCAGAAATTTATCCACTG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCATAGACGAGTTGAGTTaGAGCCGAATGCATAAGCCC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGIDELS*SRMHKP
Trigger: GGGCTTATGCATTCGGCTCCAACTCAACTCGTCTAT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAACATAGTGAGACCCTaGTCCTCTAAAATATACATA +
Preference number: 4 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRNIVRP*SSKIYI
Trigger: TATGTATATTTTAGAGGACCAGGGTCTCACTATGTT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCCCAGGTCCAGCTGCTaGTTTCAGATCAAAATTGAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGPRSSC*FQIKID
Trigger: GTCAATTTTGATCTGAAACCAGCAGCTGGACCTGGG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGGAGTCCTGAACCCTaGCTTATTCTCAGAACCATT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRSPEP*LILRTI
Trigger: AATGGTTCTGAGAATAAGCCAGGGTTCAGGACTCCT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAATAGACACAGATCTGTaGCGAGGGATTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEIDTDL*RGIGEG
Trigger: ACCTTCCCCAATCCCTCGCCACAGATCTGTGTCTAT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGGGAAAGTCACCACTaGGCAGGGAGGGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAERESHH*AGRAFL
Trigger: CAGAAATGCCCTCCCTGCCCAGTGGTGACTTTCCCT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTGACATCAAAGCAGTaGCGCTTCTCACCTCCTATG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLTSKQ*RFSPPM
Trigger: CATAGGAGGTGAGAAGCGCCACTGCTTTGATGTCAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377952.6
3UTR CAA 72 bp GTGGAACATTTTAATTACTGGCAGCACATAGACGAGTaGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: VEHFNYWQHIDE*SWSRMHKPLRN
Trigger: ATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTGCCAGTAATTAAAATGTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACERRLPF*VKDAPH
Trigger: GTGTGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000377958.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCATAGGAGCAATCCCTaGGACCAGATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGHRSNP*DQIFTS
Trigger: TGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCCTGCGAATAATTTCTaGAGGAAGACAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGPANNF*RKTVFP
Trigger: GGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCCTCTGCAAAGACTTaGACACTAATCTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSSAKT*TLIWWK
Trigger: TTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAAGAAAGTGCCTTTGTaGGTGGTCACCTTACTCAGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGKKVPL*VVTLLR
Trigger: TCTGAGTAAGGTGACCACTCACAAAGGCACTTTCTT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGCCATTCTCTAAAAGATaGGGTATCACTATATATCGG +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAPFSKR*GITIYR
Trigger: CCGATATATAGTGATACCTCATCTTTTAGAGAATGG...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACATCTTTCACTTTCATTaGATCATCTGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYIFHFH*IICGHR
Trigger: TCTGTGCCCGCAGATGATTCAATGAAAGTGAAAGAT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439167.6
ENST00000535189.5
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTCCACTGGTTGGCCTaGTACTATCGAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFHWLA*YYRMRQ
Trigger: TTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAATCTTGCAGTCTTATaGCGAGATGGGAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGNLAVL*RDGKAR
Trigger: TCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGCACATTCAAATCTTaGAGTCTTATGCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGTFKS*SLMPRW
Trigger: CCATCTCGGCATAAGACTGCAAGATTTGAATGTGCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAACTGCTCAGATTCTTaGCTGGGGTACCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAENCSDS*LGYLLW
Trigger: CCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTCACTTCCCATCTCTaGTTTGATGTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFTSHL*FDVSCL
Trigger: GAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATATCATTGGCAAATTTaGTTTGGGTCTGTATCACCA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEYHWQI*FGSVSP
Trigger: TGGTGATACAGACCCAAAGCAAATTTGCCAATGATA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACGATCTAAACACACATaGCATCTATCTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQRSKHT*HLSPIP
Trigger: AGGAATTGGAGATAGATGGCATGTGTGTTTAGATCG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGGCCAATTTGTGTGTATaGTTTGTGGCAAGATCAAAA +
Preference number: 4 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAANLCV*FVARSK
Trigger: TTTTGATCTTGCCACAAAGCATACACACAAATTGGC...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAGTTCATCTTTCCACTaGTTGGCCTGCTACTATCGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSSSFH*LACYYR
Trigger: TCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACTGATTACACTGGAATaGGCGTTCACCAGTATGGCT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELITLE*AFTSMA
Trigger: AGCCATACTGGTGAACGCCCATTCCAGTGTAATCAG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFNSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYNSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACTCTGTGTTCTCCTCTaGCTATGTGAGACGAGAACT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELCVLL*LCETRT
Trigger: AGTTCTCGTCTCACATAGCCAGAGGAGAACACAGAG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGTTAGGCGAGGTCATTaGTTTTTAGAAACGATGCTG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFVRRGH*FLETML
Trigger: CAGCATCGTTTCTAAAAACCAATGACCTCGCCTAAC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGTTAGGCGAGGTCATTaGTTTTTAGAAACGATGCTG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYVRRGH*FLETML
Trigger: CAGCATCGTTTCTAAAAACCAATGACCTCGCCTAAC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTGATGCTTGGAGAATaGGGTCTTCAGTTACTCGTA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLMLGE*GLQLLV
Trigger: TACGAGTAACTGAAGACCCCATTCTCCAAGCATCAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATGTCATCATCCACAGTaGATAAATTTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTECHHPQ*INFWSF
Trigger: GAAACTCCAGAAATTTATCCACTGTGGATGATGACA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATTGTGCAGTCTGAGGTaGAACATTTTAATTACTGGC +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKLCSLR*NILITG
Trigger: GCCAGTAATTAAAATGTTCCACCTCAGACTGCACAA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAACTCCTGGGTGTATGGTaGAAAGCCCGCCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAELLGVW*KARLIR
Trigger: TCTTATCAGGCGGGCTTTCCACCATACACCCAGGAG...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGTGACAGAAAACATTTaGAGAGCTGGGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYVTENI*RAGHCL
Trigger: CAAACAATGCCCAGCTCTCCAAATGTTTTCTGTCAC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAGGTCATTTTATATCTaGCCGATTTTGAGTATGGGC +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQRSFYI*PILSMG
Trigger: GCCCATACTCAAAATCGGCCAGATATAAAATGACCT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGATACAGATGCTACCTaGAAAAACTTTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTEDTDAT*KNFVLS
Trigger: AGACAGAACAAAGTTTTTCCAGGTAGCATCTGTATC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGTTCCACACATGGCTaGGCTCCAGGTAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAESSTHG*APGRTP
Trigger: TGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAACT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACCTGCTACTATCGAATaGGACAACATGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEPATIE*DNMSLQ
Trigger: TTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGAATTTCTGAGGCATTaGGCTTTTTCGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGEFLRH*AFSFCH
Trigger: GTGGCAAAACGAAAAAGCTCAATGCCTCAGAAATTC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACCTGCGAATAATTTCTaGAGGAAGACAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEPANNF*RKTVFP
Trigger: GGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAAGAAAGTGCCTTTGTaGGTGGTCACCTTACTCAGA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEKKVPL*VVTLLR
Trigger: TCTGAGTAAGGTGACCACTCACAAAGGCACTTTCTT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGTTTCAGATCAAAATTaGCCTCCTTCATCGGCACTT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGVSDQN*PPSSAL
Trigger: AAGTGCCGATGAAGGAGGTCAATTTTGATCTGAAAC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATGTCTGCTTTGTAAATaGCCTGCTAATTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKCLLCK*PANSLQ
Trigger: TTGCAAAGAATTAGCAGGTCATTTACAAAGCAGACA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATGCTTTGATGTGTCTTaGCTCCGCACTTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACECFDVS*LRTCCY
Trigger: ATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCTCTGGAAGGTGGATaGTTTTCTTTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSLEGG*FSFPAL
Trigger: AAGAGCTGGAAAAGAAAAGCATCCACCTTCCAGAGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR GCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGATGACTTATACATCTaGAGAACCGTGATCAGACTT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFDDLYI*RTVIRL
Trigger: AAGTCTGATCACGGTTCTGCAGATGTATAAGTCATC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGCATGTGCCACTACTaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGMCHY*PANFCI
Trigger: AATACAAAAATTAGCTGGGCAGTAGTGGCACATGCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAGCCAATTTGTGTGTATaGTTTGTGGCAAGATCAAAA +
Preference number: 4 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKANLCV*FVARSK
Trigger: TTTTGATCTTGCCACAAAGCATACACACAAATTGGC...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAAAGTTGGTCTCCTCTaGAAAGACTTGAACACTAAT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQKVGLL*KDLNTN
Trigger: ATTAGTGTTCAAGTCTTTGCAGAGGAGACCAACTTT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGTGATGGTAACCACTaGATATCTGGTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYCDGNH*ISGSTS
Trigger: TGAAGTTGAACCAGATATGCAGTGGTTACCATCACA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGTGCCCCAGATTTACTaGTCTGTTTATGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGVPQIY*SVYVNS
Trigger: GCTGTTAACATAAACAGAGCAGTAAATCTGGGGCAC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583368.1
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTGGACGTGGTTGGTTaGAAAAAGATAGATAGATGG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLDVVG*KKIDRW
Trigger: CCATCTATCTATCTTTTTGCAACCAACCACGTCCAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583368.1
CDS-3UTR CCA 90 bp ACGAGAACTCATACCGATCATGGCTTCGATATCCACACATGTTACACTCGAAAGCTTCTGCATTTCCCATaGGTTCTGACTTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: TRTHTDHGFDIHTCYTRKLLHFP*VLTLKH
Trigger: ATGTTTTAAAGTCAGAACCCATGGGAAATGCAGAAG...CTTTCGAGTGTAACATGTGTGGATATCGAAGCCATGATCGGTATGAGTTCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACTTCTGCATTTCCCATaGGTTCTGACTTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQLLHFP*VLTLKH
Trigger: ATGTTTTAAAGTCAGAACCCATGGGAAATGCAGAAG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATTCTGGCGTTCTTCATaGTTGCTGTCAGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEFWRSS*LLSVSV
Trigger: CACGGACACTGACAGCAACCATGAAGAACGCCAGAA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGNSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATGTCATCATCCACAGTaGATAAATTTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQCHHPQ*INFWSF
Trigger: GAAACTCCAGAAATTTATCCACTGTGGATGATGACA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATTGTTTGTTTTCTGTTaGTGCTGCCAAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQLFVFC*CCQTIS
Trigger: GGAAATTGTTTGGCAGCACCAACAGAAAACAAACAA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATGTGTGTATGCTTTGTaGCAAGATCAAAATACCTTT +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTECVYAL*QDQNTF
Trigger: AAAGGTATTTTGATCTTGCCACAAAGCATACACACA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAACATAGTGAGACCCTaGTCCTCTAAAATATACATA +
Preference number: 4 (lower is better)
Translates to: SKVSWSALPLCGFACMTENIVRP*SSKIYI
Trigger: TATGTATATTTTAGAGGACCAGGGTCTCACTATGTT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGGAACAGCTCACAGTaGGTCATAAAGCATAAGATT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRNSSQ*VIKHKI
Trigger: AATCTTATGCTTTATGACCCACTGTGAGCTGTTCCT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGAACTGAGTATGTTTTaGGAGCAATCTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEELSMF*EQSVRR
Trigger: TCGCCTAACAGATTGCTCTCAAAACATACTCAGTTC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAATTTGCATGTATGACTaGAAGGCTTTTCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEICMYD*KAFPRV
Trigger: CACACGTGGAAAAGCCTTTCAGTCATACATGCAAAT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCCTCTGCAAAGACTTaGACACTAATCTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESSAKT*TLIWWK
Trigger: TTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTGTCTGCTTTGTAAATaGCCTGCTAATTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFCLLCK*PANSLQ
Trigger: TTGCAAAGAATTAGCAGGTCATTTACAAAGCAGACA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAACATAGACTGAGAACCTaGGCATGCAAAACCACAGTC +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEHRLRT*ACKTTV
Trigger: GACTGTGGTTTTGCATGCTCAGGTTCTCAGTCTATG...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTATCATTGGCAAATTTaGTTTGGGTCTGTATCACCA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYYHWQI*FGSVSP
Trigger: TGGTGATACAGACCCAAAGCAAATTTGCCAATGATA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGATGACTTATACATCTaGAGAACCGTGATCAGACTT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGDDLYI*RTVIRL
Trigger: AAGTCTGATCACGGTTCTGCAGATGTATAAGTCATC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAGGATAAGCCATTTGTaGAGTCTGAGGTGGAACATT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACERISHL*SLRWNI
Trigger: AATGTTCCACCTCAGACTGCACAAATGGCTTATCCT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAATCTAGGCTCAGAATaGCACAAAGAAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGNLGSE*HKESAF
Trigger: AAAGGCACTTTCTTTGTGGCATTCTGAGCCTAGATT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCTTCTGCATTTCCCATaGGTTCTGACTTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLLHFP*VLTLKH
Trigger: ATGTTTTAAAGTCAGAACCCATGGGAAATGCAGAAG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTGACATCAAAGCAGTaGCGCTTCTCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELTSKQ*RFSPMN
Trigger: ATTCATTGGTGAGAAGCGCCACTGCTTTGATGTCAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAACTCATACCGATCATaGCTTCGATATCCACACATG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACENSYRS*LRYPHM
Trigger: CATGTGTGGATATCGAAGCCATGATCGGTATGAGTT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGTTAGGCGAGGTCATTaGTTTTTAGAAACGATGCTG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEVRRGH*FLETML
Trigger: CAGCATCGTTTCTAAAAACCAATGACCTCGCCTAAC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGRLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTGGCAAATTTGCTTTaGGTCTGTATCACCAATTCT +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLANLL*VCITNS
Trigger: AGAATTGGTGATACAGACCCAAAGCAAATTTGCCAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTGTGCAGTCTGAGGTaGAACATTTTAATTACTGGC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLCSLR*NILITG
Trigger: GCCAGTAATTAAAATGTTCCACCTCAGACTGCACAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGACCACACGTGTGGTaGCTTTGGCAACCAGAAATT +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAERPHVW*LWQPEI
Trigger: AATTTCTGGTTGCCAAAGCCACCACACGTGTGGTCT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAAAAAGATAGATAGATaGAGATCTAACCCCCGATCA +
Preference number: 4 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYKKIDR*RSNPRS
Trigger: TGATCGGGGGTTAGATCTCCATCTATCTATCTTTTT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583368.1
3UTR CAA 72 bp AAAAGAAGGCTTTGGCAAACAGCTGCATGTGCCAATTaGTGTGTATGCTTTGTGGCAAGATCAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: KRRLWQTAACAN*CVCFVARSKYL
Trigger: AAGGTATTTTGATCTTGCCACAAAGCATACACACAAATTGGCACATGCAGCTGTTTGCCAAAGCCTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGTATGGCTTCGCTTATaGACCATTAAGACATTGAAG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEVWLRL*TIKTLK
Trigger: CTTCAATGTCTTAATGGTTCATAAGCGAAGCCATAC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCACCAATGAATTTCTaGGGCATTGAGCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESPMNF*GIELFR
Trigger: ACGAAAAAGCTCAATGCCTCAGAAATTCATTGGTGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR TCA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTGCATAATCACATATaGATTAAAGCTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLHNHI*IKARRD
Trigger: GTCCCTTCTAGCTTTAATTCATATGTGATTATGCAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTCGTTTTGCCACATTaGTTGCTAATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEFVLPH*LLICPV
Trigger: TACTGGACAGATTAGCAAGCAATGTGGCAAAACGAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAGGCTTTTCCACGTGTaGTTGATATATCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACERLFHV*LIYLRK
Trigger: CTTTCTGAGATATATCAACCACACGTGGAAAAGCCT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CCA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTGTGGAAAATATCATTaGCAAATTTGCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFCGKYH*QICFGS
Trigger: AGACCCAAAGCAAATTTGCCAATGATATTTTCCACA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR TCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTTTCCACGTGTGGTTaGTATATCTCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEFSTCG*YISERM
Trigger: CATTCTTTCTGAGATATATCAACCACACGTGGAAAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR GCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATTTGTTTTCTGTTGGTaGTGCCAAACAATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEFVFCW*CQTISP
Trigger: GGGGGAAATTGTTTGGCAGCACCAACAGAAAACAAA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR GCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCTTCTACTAATCCCTaGTTCCAAATTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESSTNP*FQILFL
Trigger: GAGAAAGAGAATTTGGAAGCAGGGATTAGTAGAAGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATCTTCTATAGACAACTaGTTTAGCCCAAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAESSIDN*FSPKQL
Trigger: GAGCTGCTTTGGGCTAAACCAGTTGTCTATAGAAGA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACAGTGGATAAATTTCTaGAGTTTCGATGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEQWINF*SFDDGL
Trigger: TAGACCATCATCGAAACTCCAGAAATTTATCCACTG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATTGGGACTGTTGCCATaGAATTTCATAAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: LRLSFRLGRLDLNPSACELGLLP*NFIKPF
Trigger: AAAAGGTTTTATGAAATTCCATGGCAACAGTCCCAA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAGGAACAGCTCACAGTaGGTCATAAAGCATAAGATT +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAERNSSQ*VIKHKI
Trigger: AATCTTATGCTTTATGACCCACTGTGAGCTGTTCCT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATTGTTTGTTTTCTGTTaGTGCTGCCAAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAELFVFC*CCQTIS
Trigger: GGAAATTGTTTGGCAGCACCAACAGAAAACAAACAA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CCA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATGTGTGTATGCTTTGTaGCAAGATCAAAATACCTTT +
Preference number: 4 (lower is better)
Translates to: YSDILKTTHQNTSIPLAECVYAL*QDQNTF
Trigger: AAAGGTATTTTGATCTTGCCACAAAGCATACACACA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS GCA 90 bp GGGCTGGAGCTGCCGCTGTGGCTACTCGGCCTCTCCACGTGCTCCTaGCGTCGCCTGGACTCAGCGCGCAGCTGGCGGGAGATTCCCGGC +
Preference number: 5 (lower is better)
Translates to: GLELPLWLLGLSTCS*RRLDSARSWREIPG
Trigger: GCCGGGAATCTCCCGCCAGCTGCGCGCTGAGTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS GCA 90 bp CGGGCCGGGCTGGAGCTGCCGCTGTGGCTACTCGGCCTCTCCACGTaGTCCTGCCGTCGCCTGGACTCAGCGCGCAGCTGGCGGGAGATT +
Preference number: 5 (lower is better)
Translates to: RAGLELPLWLLGLST*SCRRLDSARSWREI
Trigger: AATCTCCCGCCAGCTGCGCGCTGAGTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS CCA 90 bp TGCCGCTGTGGCTACTCGGCCTCTCCACGTGCTCCTGCCGTCGCCTaGACTCAGCGCGCAGCTGGCGGGAGATTCCCGGCGCGGGGAGTC +
Preference number: 5 (lower is better)
Translates to: CRCGYSASPRAPAVA*TQRAAGGRFPARGV
Trigger: GACTCCCCGCGCCGGGAATCTCCCGCCAGCTGCGCGCTGAGTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS CCA 90 bp GTATATCTTCCATGTCGCTGCCGGGCCGGGCTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACGTGCTCCTGCCGTCGCCTGGACTCA +
Preference number: 5 (lower is better)
Translates to: VYLPCRCRAGLELPL*LLGLSTCSCRRLDS
Trigger: TGAGTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATATAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS GCA 90 bp ATTTGTTTGTATATCTTCCATGTCGCTGCCGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCCTCTCCACGTGCTCCTGCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: ICLYIFHVAAGPGWS*RCGYSASPRAPAVA
Trigger: GGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATATACAAACAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS CCA 90 bp TTCCGCATTTGTTTGTATATCTTCCATGTCGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTACTCGGCCTCTCCACGTGCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: FRICLYIFHVAAGPG*SCRCGYSASPRAPA
Trigger: GGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATATACAAACAAATGCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS-3UTR CAA 90 bp CGAGGTGGGAGCAGGCGGTGTCTGGACCAAGGGGCGCAGGGCTTCGGCGCCAAGGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: RGGSRRCLDQGAQGFGAKVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...CTTGGCGCCGAAGCCCTGCGCCCCTTGGTCCAGACACCGCCTGCTCCCACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCGTACGGCAGCGCTCCTaGTGCTCCTCAAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGVRQRS*CSSREL
Trigger: AAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCGTAC...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS CCA 90 bp AGCCGACACCAGGGCACATTCAAATCTTGCAGTCTTATGCCGAGATaGGAAAGCTCGACCCATCCCCAACCAGTACCAGTGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SRHQGTFKSCSLMPR*ESSTHPQPVPVSPG
Trigger: CCCAGGGGACACTGGTACTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR CAA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGGTACGGCAGCGCTCCTaGTGCTCCTCAAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRVRQRS*CSSREL
Trigger: AAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCGTAC...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPSLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCCCACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: GVRKSGEPPSEVASHCGPTSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...GGGCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGGGGCCTACAAGGCTCTaGTTCAGAGGGAGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGREGPTRL*FRGSLH
Trigger: ATGCAGACTCCCTCTGAACAAGAGCCTTGTAGGCCC...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCCCGATGCTGACTCTTaGAGTCCTCAGATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGREPDADS*SPQIAR
Trigger: CCTGGCTATCTGAGGACTCAAAGAGTCAGCATCGGG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAAGGTGGGTGGCATCTaGGGACTCTCTCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGREKVGGI*GLSPGF
Trigger: AAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCTT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGTACGGCAGCGCTCCTaGTGCTCCTCAAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: PRHSADNGHPQTTRVVALVRQRS*CSSREL
Trigger: AAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCGTAC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRRSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYRSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGCCCAGTTCTGTCACCTaGGCTGCAAGGAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGREPSSVT*AARKLC
Trigger: GCAAAGTTTCCTTGCAGCCAAGGTGACAGAACTGGG...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GAGGAGTTCGTAAGAGCGGGGAACCTCCTTCAGAAGTGGCATCCCATTGCGGGCTCATCTTTCCACTGGTaGGCCTGCTACTATCGAATG +
Preference number: 5 (lower is better)
Translates to: EEFVRAGNLLQKWHPIAGSSFHW*ACYYRM
Trigger: CATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGA...GCCCGCAATGGGATGCCACTTCTGAAGGAGGTTCCCCGCTCTTACGAACTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GACCAAGGGGCGCAGGGCTTCGGCGCCAAGATAGCTGATGGCGTTATTGATGGCGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 5 (lower is better)
Translates to: DQGAQGFGAKIADGVIDGVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...GCCATCAATAACGCCATCAGCTATCTTGGCGCCGAAGCCCTGCGCCCCTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGGAGGCTGAGGCAGGATaGCTTGAGCACAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PRHSADNGHPQTTRVVALEAEAG*LEHRSL
Trigger: CAAACTCCTGTGCTCAAGCAATCCTGCCTCAGCCTC...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGTTGTCCAGGCTGGATaGCAATGGCGCGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDVVQAG*QWRDLG
Trigger: GCCGAGATCGCGCCATTGCAATCCAGCCTGGACAAC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACATCTGTGGCGAGGGATaGGGGAAGGTGGGTGGCATC +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDICGEG*GKVGGI
Trigger: GATGCCACCCACCTTCCCCAATCCCTCGCCACAGAT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS TCA 90 bp CTAATCTGTCCAGTACGAGAGCTCTTTCACTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCACTTGCAGTGTCCCCTGGGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: LICPVRELFHFPSLL*CVLPPHLQCPLGQC
Trigger: GCACTGACCCAGGGGACACTGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCTCTCGTACTGGACAGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000467757.5
ENST00000535189.5
CDS GCA 90 bp GTCAGTGAAGCCGACACCAGGGCACATTCAAATCTTGCAGTCTTATaGCGAGATGGGAAAGCTCGACCCATCCCCAACCAGTACCAGTGT +
Preference number: 5 (lower is better)
Translates to: VSEADTRAHSNLAVL*RDGKARPIPNQYQC
Trigger: ACACTGGTACTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCTTCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGTACGGCAGCGCTCCTaGTGCTCCTCAAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDVRQRS*CSSREL
Trigger: AAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCGTAC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CATTGCGGGCCCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HCGPETGPCDFADRCDSGGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...GCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGGGCCCGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTERSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAGAAGGATAAGCCATTaGTGCAGTCTGAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGRERRISH*CSLRWN
Trigger: GTTCCACCTCAGACTGCACAAATGGCTTATCCTTCT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAGGGAGCAAAGCGCTTaGACTTCCCTGGGTGCGACA +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYREQSA*TSLGAT
Trigger: TGTCGCACCCAGGGAAGTCAAAGCGCTTTGCTCCCT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS GCA 90 bp GTCAGTGAAGCCGACACCAGGGCACATTCAAATCTTGCAGTCTTATaGCGAGATGGGAAAGCTCGACCCATCCCCAACCAGTACCTTCAT +
Preference number: 5 (lower is better)
Translates to: VSEADTRAHSNLAVL*RDGKARPIPNQYLH
Trigger: ATGAAGGTACTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCTTCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583368.1
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: SALMCLASALAVITAQILRSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: PRHSADNGHPQTTRVVALITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGGTGGTGTGCACTTGTaGTCCCAGTACTCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYGGVHL*SQYSRG
Trigger: GCCTCTTGAGTACTGGGACAACAAGTGCACACCACC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAACGGGAGGATGGCTCGTaGCTTGAGCCCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKREDGS*LEPRRL
Trigger: CAACCTCCTGGGCTCAAGCAACGAGCCATCCTCCCG...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAACGGGAGGATGGCTCGTaGCTTGAGCCCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQREDGS*LEPRRL
Trigger: CAACCTCCTGGGCTCAAGCAACGAGCCATCCTCCCG...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTAGGGAGCAAAGCGCTTaGACTTCCCTGGGTGCGACA +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPREQSA*TSLGAT
Trigger: TGTCGCACCCAGGGAAGTCAAAGCGCTTTGCTCCCT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAATCTGTGGCGAGGGATaGGGGAAGGTGGGTGGCATC +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEICGEG*GKVGGI
Trigger: GATGCCACCCACCTTCCCCAATCCCTCGCCACAGAT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS TCA 90 bp GTTATAACTGCTCAGATTCTTGCCTGGGGTACCTGCTGTGGTCAGTaGAGCCGACACCAGGGCACATTCAAATCTTGCAGTCTTATGCCG +
Preference number: 5 (lower is better)
Translates to: VITAQILAWGTCCGQ*SRHQGTFKSCSLMP
Trigger: CGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS CCA 90 bp AGCCGACACCAGGGCACATTCAAATCTTGCAGTCTTATGCCGAGATaGGAAAGCTCGACCCATCCCCAACCAGTACCTTCATTAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SRHQGTFKSCSLMPR*ESSTHPQPVPSLAR
Trigger: TCTTGCTAATGAAGGTACTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583368.1
CDS-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGTCATCTTTCCACTGGTaGGCCTGCTACTATCGAATG +
Preference number: 5 (lower is better)
Translates to: PRHSADNGHPQTTRVVALSSFHW*ACYYRM
Trigger: CATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGA...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GGCTATGGGATACATGCTGCTGATAACTGGAACCATCTCCGAGGTGGGAGCAGGGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 5 (lower is better)
Translates to: GYGIHAADNWNHLRGGSRVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...CCTGCTCCCACCTCGGAGATGGTTCCAGTTATCAGCAGCATGTATCCCATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CCGAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: PRQDHVILLIDVILAFFMESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...CATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFRSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGATAGGCTCCATGAAGTaGTCCCTGGAAGCAGAATTT +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKIGSMK*SLEAEF
Trigger: AAATTCTGCTTCCAGGGACAACTTCATGGAGCCTAT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGCCCTTTGCATGGGTTaGGTTGTTCCTCAGACCGTG +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGALCMG*VVPQTV
Trigger: CACGGTCTGAGGAACAACCAAACCCATGCAAAGGGC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTGAGGCTGAGGCAGGATaGCTTGAGCACAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPEAEAG*LEHRSL
Trigger: CAAACTCCTGTGCTCAAGCAATCCTGCCTCAGCCTC...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGGGTTTCAGATCAAAATaGACCTCCTTCATCGGCACT +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKGFRSK*TSFIGT
Trigger: AGTGCCGATGAAGGAGGTCAATTTTGATCTGAAACC...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCCACCAAAAAGGGCCTaGTCTGCTAGCCTGGAGTAT +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDPPKRA*SASLEY
Trigger: ATACTCCAGGCTAGCAGACAAGGCCCTTTTTGGTGG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS CCA 90 bp ACTTGCTGTTATAACTGCTCAGATTCTTGCCTGGGGTACCTGCTGTaGTCAGTGAAGCCGACACCAGGGCACATTCAAATCTTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: TCCYNCSDSCLGYLL*SVKPTPGHIQILQS
Trigger: AGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGTACCCCAGGCAAGAATCTGAGCAGTTATAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGCAGTTCCGCATTTGTTaGTATATCTTCCATGTCGCT +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKQFRIC*YIFHVA
Trigger: AGCGACATGGAAGATATACAAACAAATGCGGAACTG...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: WSHRYTSITSPSLLITLTMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTESWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGRSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYSLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYTSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGCTTGCTCTGCCAACCTaGACCAAAGGAAAGCGATGT +
Preference number: 5 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRLALPT*TKGKRC
Trigger: ACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAG...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGATATCATTGGCAAATTaGCTTTGGGTCTGTATCACC +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGREISLAN*LWVCIT
Trigger: GGTGATACAGACCCAAAGCAAATTTGCCAATGATAT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGATACCTTTCTGTTTTTaGTTCCTCTCCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKIPFCF*FLSTTF
Trigger: GAAGGTGGTGGAGAGGAACAAAAAACAGAAAGGTAT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGTCACCACTGGGCAGGGAGAGGAATTTGGGATTCTaGGCTCTGGTAGAAATGTTA +
Preference number: 5 (lower is better)
Translates to: LQVELHRSDEGKSPLGRERNLGF*ALVEML
Trigger: TAACATTTCTACCAGAGCCAAGAATCCCAAATTCCT...CTCCCTGCCCAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTTCCACACATGGCTGGGCTCCAGGTAGAACTCCATAGGAGTGACGAGGGAAAGAGTGACAGAAAACATTaGGAGAGCTGGGCATTGTTT +
Preference number: 5 (lower is better)
Translates to: VPHMAGLQVELHRSDEGKSDRKH*ESWALF
Trigger: AAACAATGCCCAGCTCTCCAAATGTTTTCTGTCACT...CTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGTTGTCCAGGCTGGATaGCAATGGCGCGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYVVQAG*QWRDLG
Trigger: GCCGAGATCGCGCCATTGCAATCCAGCCTGGACAAC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCTCCCTTTTCTCTTCTaGAGCTCACAAGTCCCGATG +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDLPFLF*SSQVPM
Trigger: CATCGGGACTTGTGAGCTCAAGAAGAGAAAAGGGAG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS GCA 90 bp CATTCAAAACCGCTGCACTTTCTGCGGGCACAGACTGCTCCTGAGTaGTTTTCAGTTCCGCATTTGTTTGTATATCTTCCATGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: HSKPLHFLRAQTAPE*FSVPHLFVYLPCRC
Trigger: GCAGCGACATGGAAGATATACAAACAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTGTGCCCGCAGAAAGTGCAGCGGTTTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGTACGGCAGCGCTCCTaGTGCTCCTCAAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFVRQRS*CSSREL
Trigger: AAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCGTAC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SALMCLASALAVITAQILSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GCATTGAGCTTTTTCGTTTTGCCACATTGCTTGCTAATCTGTCCAGTACGAGAGTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ALSFFVLPHCLLICPVRESWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...CTCTCGTACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTTGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: PRHSADNGHPQTTRVVALQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAAGAAGTGGCATCCCATaGCGGGCCCGAGACAGGACC +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACERSGIP*RARDRT
Trigger: GGTCCTGTCTCGGGCCCGCAATGGGATGCCACTTCT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPSLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGCATGGTGGTGTGCACTaGTTGTCCCAGTACTCAAGA +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGHGGVH*LSQYSR
Trigger: TCTTGAGTACTGGGACAACAAGTGCACACCACCATG...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTCAGCACATAGACGAGTaGAGTTGGAGCCGAATGCAT +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPQHIDE*SWSRMH
Trigger: ATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CCTCGTCATTCTGCAGACAATGGTCATCCACAGACCACACGTGTGGTGGCTTTGCTTGGTTTCACAATCTaGAGATGCAAAAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: PRHSADNGHPQTTRVVALLGFTI*RCKRWS
Trigger: AGACCACCTTTTGCATCTCAAGATTGTGAAACCAAG...CAAAGCCACCACACGTGTGGTCTGTGGATGACCATTGTCTGCAGAATGACGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTTGCATGGGTTTGGTaGTTCCTCAGACCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEFAWVW*FLRPWP
Trigger: AGGCCACGGTCTGAGGAACAACCAAACCCATGCAAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGCTCCCTTTTCTCTTCTaGAGCTCACAAGTCCCGATG +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGLPFLF*SSQVPM
Trigger: CATCGGGACTTGTGAGCTCAAGAAGAGAAAAGGGAG...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCTTGAGCCCAGGAGGTaGAGGCGGCAAGTAAGCCTT +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLEPRR*RRQVSL
Trigger: AAGGCTTACTTGCCGCCTCAACCTCCTGGGCTCAAG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS TCA 90 bp CTAATCTGTCCAGTACGAGAGCTCTTTCACTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCACTTGCAGTATGGCTTCGCTTATGAA +
Preference number: 5 (lower is better)
Translates to: LICPVRELFHFPSLL*CVLPPHLQYGFAYE
Trigger: TTCATAAGCGAAGCCATACTGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCTCTCGTACTGGACAGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439016.2
CDS CCA 90 bp GTGTCTTGCCTCCGCACTTGCTCCTATGTCTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCACATTTTCCATTTCATGAGATTTGGT +
Preference number: 5 (lower is better)
Translates to: VSCLRTCSYVFIFIG*AFSTVHIFHFMRFG
Trigger: ACCAAATCTCATGAAATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGCAAGTGCGGAGGCAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTCATCTTTCCACTGGTaGGCCTGCTACTATCGAATG +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGSSFHW*ACYYRM
Trigger: CATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TACATAGGAGCAATCCCTGAGACCAGATATTCACTTCAGCAGGGCTCTGTGTTCGGGCACATTCAAATCTaGCAGTCTTATGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: YIGAIPETRYSLQQGSVFGHIQI*QSYAEM
Trigger: CATCTCGGCATAAGACTGCAAGATTTGAATGTGCCC...GAACACAGAGCCCTGCTGAAGTGAATATCTGGTCTCAGGGATTGCTCCTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGGGCACATTCAAATCTaGCAGTCTTATGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGGHIQI*QSYAEM
Trigger: CATCTCGGCATAAGACTGCAAGATTTGAATGTGCCC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTETSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGGTGGTGTGCACTTGTaGTCCCAGTACTCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYGGVHL*SQYSRG
Trigger: GCCTCTTGAGTACTGGGACAACAAGTGCACACCACC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGCAGCACATAGACGAGTaGAGTTGGAGCCGAATGCAT +
Preference number: 5 (lower is better)
Translates to: KQFPPLYPCSANLDQRKAQHIDE*SWSRMH
Trigger: ATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGAGAAGGATAAGCCATTaGTGCAGTCTGAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGRRISH*CSLRWN
Trigger: GTTCCACCTCAGACTGCACAAATGGCTTATCCTTCT...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAATTTGCATGGGTTTGGTaGTTCCTCAGACCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQFAWVW*FLRPWP
Trigger: AGGCCACGGTCTGAGGAACAACCAAACCCATGCAAA...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGGGAGAGGCACAGTCTaGTGTTACTTTACAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGGRGTV*CYFTSS
Trigger: AGAGCTTGTAAAGTAACACAAGACTGTGCCTCTCCC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCTTGAGCCCAGGAGGTaGAGGCGGCAAGTAAGCCTT +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLEPRR*RRQVSL
Trigger: AAGGCTTACTTGCCGCCTCAACCTCCTGGGCTCAAG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGGCAACCCACAGTAATTaGGTTTCTGTGAACCCACAG +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGATHSN*VSVNPQ
Trigger: CTGTGGGTTCACAGAAACCAAATTACTGTGGGTTGC...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS TCA 90 bp CTAATCTGTCCAGTACGAGAGCTCTTTCACTTCCCATCTCTGCTTTaGTGTGTCTTGCCTCCGCACTTGCTCCTATGTCTTCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: LICPVRELFHFPSLL*CVLPPHLLLCLHLH
Trigger: ATGAAGATGAAGACATAGGAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCTCTCGTACTGGACAGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS CCA 90 bp ACACTGGAATGGGCGTTCACCTCCTATGTCTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCACATTTTCCATTTCATGAGATTTGGT +
Preference number: 5 (lower is better)
Translates to: TLEWAFTSYVFIFIG*AFSTVHIFHFMRFG
Trigger: ACCAAATCTCATGAAATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGGTGAACGCCCATTCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377958.6
CDS-3UTR CAA 90 bp TGGTCACACCGATACACATCCATCACCTCCCCTTCCTTGTTGATCACTTTGACGCAGTTCCGCATTTGTTaGTATATCTTCCATGTCGCT +
Preference number: 5 (lower is better)
Translates to: WSHRYTSITSPSLLITLTQFRIC*YIFHVA
Trigger: AGCGACATGGAAGATATACAAACAAATGCGGAACTG...CGTCAAAGTGATCAACAAGGAAGGGGAGGTGATGGATGTGTATCGGTGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCAGTTCCGCATTTGTTaGTATATCTTCCATGTCGCT +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDQFRIC*YIFHVA
Trigger: AGCGACATGGAAGATATACAAACAAATGCGGAACTG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCAGTTCCGCATTTGTTaGTATATCTTCCATGTCGCT +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYQFRIC*YIFHVA
Trigger: AGCGACATGGAAGATATACAAACAAATGCGGAACTG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTTATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: SALMCLASALAVITAQILMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...AAGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGTACGGCAGCGCTCCTaGTGCTCCTCAAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEVRQRS*CSSREL
Trigger: AAGTTCCCTTGAGGAGCACAAGGAGCGCTGCCGTAC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGAGTCGTGGCCACTATaGTTGGGAGAGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEESWPL*LGERPL
Trigger: GAGAGGCCTCTCTCCCAACAATAGTGGCCACGACTC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGSLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGAGCTGCATGTGCCAATTaGTGTGTATGCTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRAACAN*CVCFVA
Trigger: TGCCACAAAGCATACACACAAATTGGCACATGCAGC...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTGCCAAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGCTTGGTTTCACAATCTaGAGATGCAAAAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: AAKQFPPLYPCSANLDQRLGFTI*RCKRWS
Trigger: AGACCACCTTTTGCATCTCAAGATTGTGAAACCAAG...CCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTTGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCAAAGAAATCTGAGGTaGTGGCTGGGCGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGQRNLR*WLGAVA
Trigger: AGCCACTGCGCCCAGCCACAACCTCAGATTTCTTTG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGAGGCTCTTTCACATCTaGAGTGTCCCAGAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: KQFPPLYPCSANLDQRKARLFHI*SVPEFP
Trigger: TGGAAACTCTGGGACACTCAAGATGTGAAAGAGCCT...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CAA 90 bp GAGACAGGACCATGTGATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTGGGCACATTCAAATCTaGCAGTCTTATGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: ETGPCDFADRCDSGVLHGGHIQI*QSYAEM
Trigger: CATCTCGGCATAAGACTGCAAGATTTGAATGTGCCC...ACCATGAAGAACGCCAGAATCACATCTATCAGCAAAATCACATGGTCCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGGCGTTATTGATGGCTaGGTCCATCATGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEGVIDG*VHHAGL
Trigger: CAGACCCGCATGATGGACCAAGCCATCAATAACGCC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATGGCGTTCTTCATGGTaGCTGTCAGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEWRSSW*LSVSVE
Trigger: CTCCACGGACACTGACAGCAACCATGAAGAACGCCA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYTSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFTSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAAGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCTTGCTCTGCCAACCTaGACCAAAGGAAAGCGATGT +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLALPT*TKGKRC
Trigger: ACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACATTGGCAAATTTGCTTaGGGTCTGTATCACCAATTC +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDIGKFA*GLYHQF
Trigger: GAATTGGTGATACAGACCCAAAGCAAATTTGCCAAT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACCATGGTGGTGTGCACTaGTTGTCCCAGTACTCAAGA +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYHGGVH*LSQYSR
Trigger: TCTTGAGTACTGGGACAACAAGTGCACACCACCATG...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGGGCCTACAAGGCTCTaGTTCAGAGGGAGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEGPTRL*FRGSLH
Trigger: ATGCAGACTCCCTCTGAACAAGAGCCTTGTAGGCCC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGCCCTTTGCATGGGTTaGGTTGTTCCTCAGACCGTG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEALCMG*VVPQTV
Trigger: CACGGTCTGAGGAACAACCAAACCCATGCAAAGGGC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GTACAGAAGGCAGCGTTTATCTGTGTGATGGTAACCACTGCATATCTGGTTCAAAGGCTCTTTCACATCTaGAGTGTCCCAGAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: VQKAAFICVMVTTAYLVQRLFHI*SVPEFP
Trigger: TGGAAACTCTGGGACACTCAAGATGTGAAAGAGCCT...TTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAACCCGATGCTGACTCTTaGAGTCCTCAGATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEPDADS*SPQIAR
Trigger: CCTGGCTATCTGAGGACTCAAAGAGTCAGCATCGGG...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGACACGTGTGGTGGCTTaGGCAACCAGAAATTTAAAA +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGTRVVA*ATRNLK
Trigger: TTTTAAATTTCTGGTTGCCAAAGCCACCACACGTGT...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGTCTTGCCTCCGCACTaGCTCCTATGTCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFVLPPH*LLCLHL
Trigger: AAGATGAAGACATAGGAGCAAGTGCGGAGGCAAGAC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS-3UTR CAA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTCAGTTCCGCATTTGTTaGTATATCTTCCATGTCGCT +
Preference number: 5 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSQFRIC*YIFHVA
Trigger: AGCGACATGGAAGATATACAAACAAATGCGGAACTG...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTCATCTTTCCACTGGTaGGCCTGCTACTATCGAATG +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFSSFHW*ACYYRM
Trigger: CATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCTGCTTTGATGTGTCTTGCCTCCGCACTTGCTGTTATAACTGCTCAGATTCTCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: LCFDVSCLRTCCYNCSDSQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...AGAATCTGAGCAGTTATAACAGCAAGTGCGGAGGCAAGACACATCAAAGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAACAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTEQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp GGTCTCCTCTGCAAAGACTTGAACACTAATCTGGTGGAAAGGCTTCCTTTCCCTATTGGCAAATTTGCTTaGGGTCTGTATCACCAATTC +
Preference number: 5 (lower is better)
Translates to: GLLCKDLNTNLVERLPFPIGKFA*GLYHQF
Trigger: GAATTGGTGATACAGACCCAAAGCAAATTTGCCAAT...AGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGCTGCATGTGCCAATTaGTGTGTATGCTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFAACAN*CVCFVA
Trigger: TGCCACAAAGCATACACACAAATTGGCACATGCAGC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACAACATGTTGGGACTGTaGCCATGGAATTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: SQQGQLVSSSSLWICMYDNMLGL*PWNFIK
Trigger: TTTTATGAAATTCCATGGCAACAGTCCCAACATGTT...GTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAGGTTTCAGATCAAAATaGACCTCCTTCATCGGCACT +
Preference number: 5 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKGFRSK*TSFIGT
Trigger: AGTGCCGATGAAGGAGGTCAATTTTGATCTGAAACC...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp GCTTCCCAGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATAACCTCACAACATCCTaGGAAGGTAGATATTGTTAT +
Preference number: 5 (lower is better)
Translates to: ASQQGQLVSSSSLWICMYNLTTS*EGRYCY
Trigger: ATAACAATATCTACCTTCCAAGGATGTTGTGAGGTT...ATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCTGGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AAACAATTTCCCCCTTTATACCCTTGCTCTGCCAACCTTGACCAAAGGAAAGCGACACGTGTGGTGGCTTaGGCAACCAGAAATTTAAAA +
Preference number: 5 (lower is better)
Translates to: KQFPPLYPCSANLDQRKATRVVA*ATRNLK
Trigger: TTTTAAATTTCTGGTTGCCAAAGCCACCACACGTGT...CGCTTTCCTTTGGTCAAGGTTGGCAGAGCAAGGGTATAAAGGGGGAAATTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS CCA 90 bp ACATTTGTAGGGTTTCTCCACTCCTATGTCTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCACATTTTCCATTTCATGAGATTTGGT +
Preference number: 5 (lower is better)
Translates to: TFVGFLHSYVFIFIG*AFSTVHIFHFMRFG
Trigger: ACCAAATCTCATGAAATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGTGGAGAAACCCTACAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377944.7
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEMSSSS*AGPSPL
Trigger: CAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACAT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTCATCTTTCCACTGGTaGGCCTGCTACTATCGAATG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSSFHW*ACYYRM
Trigger: CATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGGGCACATTCAAATCTaGCAGTCTTATGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGGHIQI*QSYAEM
Trigger: CATCTCGGCATAAGACTGCAAGATTTGAATGTGCCC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTGGTCAGCTCTTCCTCTTTGTGGATTTGCATGTATGACTGAATTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: SKVSWSALPLCGFACMTELSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...TTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACCAGCTGACCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAATCGTGGCCACTATTGTaGGGAGAGAGGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAESWPLL*GERPLS
Trigger: TGAGAGAGGCCTCTCTCCCAACAATAGTGGCCACGA...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp ATTTTGCTGATAGATGTGATTCTGGCGTTCTTCATGGTTGCTGTCAGTGTCCGTCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: ILLIDVILAFFMVAVSVRQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...ACGGACACTGACAGCAACCATGAAGAACGCCAGAATCACATCTATCAGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293068.9
ENST00000348427.7
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCCTTGTTGATCACTTaGACGGAGTCTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESLLIT*TESLGQ
Trigger: CTGCCCAAGAGACTCCGTCAAAGTGATCAACAAGGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACETSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAATCACCTCCCCTTCCTaGTTGATCACTTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEITSPS*LITLTE
Trigger: CTCCGTCAAAGTGATCAACAAGGAAGGGGAGGTGAT...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CTCAACTCCGATCTAAACACACATGCCATCTATCTCCAATTCCTCTCCTGTGGGAACATGTTGGGACTGTaGCCATGGAATTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: LNSDLNTHAIYLQFLSCGNMLGL*PWNFIK
Trigger: TTTTATGAAATTCCATGGCAACAGTCCCAACATGTT...CCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TATAAAAAGAGTCCCCAGGCTGGTGGAATGGGCCTTGGTTTCACAATCTTGAGATATATCTGGCCGATTTaGAGTATGGGCCTAACAAAA +
Preference number: 5 (lower is better)
Translates to: YKKSPQAGGMGLGFTILRYIWPI*SMGLTK
Trigger: TTTTGTTAGGCCCATACTCAAAATCGGCCAGATATA...TCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAAAGGTGGGTGGCATCTaGGGACTCTCTCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEKVGGI*GLSPGF
Trigger: AAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCTT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAATCATCTTTCCACTGGTaGGCCTGCTACTATCGAATG +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACESSFHW*ACYYRM
Trigger: CATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGA...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377945.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAAATATCATTGGCAAATTaGCTTTGGGTCTGTATCACC +
Preference number: 5 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKISLAN*LWVCIT
Trigger: GGTGATACAGACCCAAAGCAAATTTGCCAATGATAT...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CAGCACATAGACGAGTTGAGTTGGAGCCGAATGCATAAGCCCCTTAGAAATAAATATATCTGGCCGATTTaGAGTATGGGCCTAACAAAA +
Preference number: 5 (lower is better)
Translates to: QHIDELSWSRMHKPLRNKYIWPI*SMGLTK
Trigger: TTTTGTTAGGCCCATACTCAAAATCGGCCAGATATA...TTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTCTATGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAACCACCAAAAAGGGCCTaGTCTGCTAGCCTGGAGTAT +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEPPKRA*SASLEY
Trigger: ATACTCCAGGCTAGCAGACAAGGCCCTTTTTGGTGG...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGTTTTGCCACATTGCTaGCTAATCTGTCCAGTACGA +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEVLPHC*LICPVR
Trigger: TCGTACTGGACAGATTAGCAAGCAATGTGGCAAAAC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTTCGTTTTGCCACATaGCTTGCTAATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGFRFAT*LANLSS
Trigger: ACTGGACAGATTAGCAAGCAATGTGGCAAAACGAAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCCAGGACCATGTGATTTaGCTGATAGATGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGQDHVI*LIDVIL
Trigger: CAGAATCACATCTATCAGCAAAATCACATGGTCCTG...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAACCTCCCCTTCCTTGTaGATCACTTTGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAETSPSL*ITLTES
Trigger: AGACTCCGTCAAAGTGATCAACAAGGAAGGGGAGGT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp CTTAGACTGTCATTTAGATTAGGGAGATTAGATCTTAACCCTTCAGCCTGTGAAGTCAGCTCTTCCTCTTaGTGGATTTGCATGTATGAC +
Preference number: 5 (lower is better)
Translates to: LRLSFRLGRLDLNPSACEVSSSS*WICMYD
Trigger: GTCATACATGCAAATCCACAAAGAGGAAGAGCTGAC...TTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGACAGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCATACCTTTCTGTTTTTaGTTCCTCTCCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGIPFCF*FLSTTF
Trigger: GAAGGTGGTGGAGAGGAACAAAAAACAGAAAGGTAT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTACAGGAATTTGGGATTCTaGGCTCTGGTAGAAATGTTA +
Preference number: 5 (lower is better)
Translates to: NMLDLRIISEGRQCFPGYRNLGF*ALVEML
Trigger: TAACATTTCTACCAGAGCCAAGAATCCCAAATTCCT...GTAGCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCAGTGACAGAAAACATTaGGAGAGCTGGGCATTGTTT +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGSDRKH*ESWALF
Trigger: AAACAATGCCCAGCTCTCCAAATGTTTTCTGTCACT...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp AATAATATGCTAGACCTGCGAATAATTTCTGAAGGAAGACAGTGTTTCCCTGGCTTGAGCTTTTTCGTTTaGCCACATTGCTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: NNMLDLRIISEGRQCFPGLSFFV*PHCLLI
Trigger: GATTAGCAAGCAATGTGGCAAAACGAAAAAGCTCAA...GCCAGGGAAACACTGTCTTCCTTCAGAAATTATTCGCAGGTCTAGCATATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000583368.1
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAGGGAGAGGCACAGTCTaGTGTTACTTTACAAGCTCT +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEGRGTV*CYFTSS
Trigger: AGAGCTTGTAAAGTAACACAAGACTGTGCCTCTCCC...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp ATCTCCGGGACCACTCATTCCACTGCTGTAGAAGATAATGACCAAATACCTTTTAACCTCACAACATCCTaGGAAGGTAGATATTGTTAT +
Preference number: 5 (lower is better)
Translates to: ISGTTHSTAVEDNDQIPFNLTTS*EGRYCY
Trigger: ATAACAATATCTACCTTCCAAGGATGTTGTGAGGTT...AAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAGCAACCCACAGTAATTaGGTTTCTGTGAACCCACAG +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEATHSN*VSVNPQ
Trigger: CTGTGGGTTCACAGAAACCAAATTACTGTGGGTTGC...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS TCA 90 bp CACATCGCAGTTCATCTTTCCACTGGTTGGCCTGCTACTATCGAATaGGACAACATGTCTCTCCAACTTAATGTTTTCATATTCATTATA +
Preference number: 5 (lower is better)
Translates to: HIAVHLSTGWPATIE*DNMSLQLNVFIFII
Trigger: TATAATGAATATGAAAACATTAAGTTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACTGCGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346243.7
ENST00000346872.8
ENST00000348427.7
ENST00000350532.7
ENST00000351680.7
ENST00000377945.7
ENST00000439016.2
ENST00000439167.6
ENST00000467757.5
ENST00000535189.5
ENST00000623724.3
CDS-3UTR CAA 90 bp TACAGTGATATACTGAAGACTACACACCAAAATACATCCATTCCTTTAGCTGAAATAGGCTCCATGAAGTaGTCCCTGGAAGCAGAATTT +
Preference number: 5 (lower is better)
Translates to: YSDILKTTHQNTSIPLAEIGSMK*SLEAEF
Trigger: AAATTCTGCTTCCAGGGACAACTTCATGGAGCCTAT...TTCAGCTAAAGGAATGGATGTATTTTGGTGTGTAGTCTTCAGTATATCACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346872.8
ENST00000623724.3
CDS TCA 72 bp GAGTCCCCGGGATCCGGCAGCCGCGTCGGCGCAGACTaGAAAGGGCAGGAGCCGGCGACCTGCCGGTGCGCG +
Preference number: 6 (lower is better)
Translates to: ESPGSGSRVGAD*KGQEPATCRCA
Trigger: CGCGCACCGGCAGGTCGCCGGCTCCTGCCCTTTTCAGTCTGCGCCGACGCGGCTGCCGGATCCCGGGGACTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS CCA 72 bp CCATGTCGCTGCCGGGCCGGGCTGGAGCTGCCGCTGTaGCTACTCGGCCTCTCCACGTGCTCCTGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: PCRCRAGLELPL*LLGLSTCSCRR
Trigger: GCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGCGACATGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS GCA 72 bp CTGCCGCTGTGGCTACTCGGCCTCTCCACGTGCTCCTaGCGTCGCCTGGACTCAGCGCGCAGCTGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: LPLWLLGLSTCS*RRLDSARSWRE
Trigger: CTCCCGCCAGCTGCGCGCTGAGTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS CCA 72 bp GGCTACTCGGCCTCTCCACGTGCTCCTGCCGTCGCCTaGACTCAGCGCGCAGCTGGCGGGAGATTCCCGGCG +
Preference number: 6 (lower is better)
Translates to: GYSASPRAPAVA*TQRAAGGRFPA
Trigger: CGCCGGGAATCTCCCGCCAGCTGCGCGCTGAGTCCAGGCGACGGCAGGAGCACGTGGAGAGGCCGAGTAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346872.8
CDS GCA 72 bp TATATCTTCCATGTCGCTGCCGGGCCGGGCTGGAGCTaGCGCTGTGGCTACTCGGCCTCTCCACGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: YIFHVAAGPGWS*RCGYSASPRAP
Trigger: AGGAGCACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS CCA 72 bp TGTTTGTATATCTTCCATGTCGCTGCCGGGCCGGGCTaGAGCTGCCGCTGTGGCTACTCGGCCTCTCCACGT +
Preference number: 6 (lower is better)
Translates to: CLYIFHVAAGPG*SCRCGYSASPR
Trigger: ACGTGGAGAGGCCGAGTAGCCACAGCGGCAGCTCCAGCCCGGCCCGGCAGCGACATGGAAGATATACAAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS TCA 72 bp GCCTCCGCACTTGCAGTGTCCCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGCTCCTTGTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ASALAVSPGSVL*RNVRQRSLCSS
Trigger: TGAGGAGCACAAGGAGCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGGGGACACTGCAAGTGCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000467757.5
ENST00000535189.5
CDS TCA 72 bp CCCCAACCAGTACCAGTGTCCCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGCTCCTTGTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PQPVPVSPGSVL*RNVRQRSLCSS
Trigger: TGAGGAGCACAAGGAGCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGGGGACACTGGTACTGGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS TCA 72 bp TGGCGCTTCTCACCAGTGTCCCCTGGGTCAGTGCTCTaGAGAAATGTACGGCAGCGCTCCTTGTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: WRFSPVSPGSVL*RNVRQRSLCSS
Trigger: TGAGGAGCACAAGGAGCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGGGGACACTGGTGAGAAGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350532.7
CDS GCA 72 bp CCCATCCCCAACCAGTACCAGTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGCAGCGCTCCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: PIPNQYQCPLGQ*SEEMYGSAPCA
Trigger: AGCACAAGGAGCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGGGGACACTGGTACTGGTTGGGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000623724.3
CDS GCA 72 bp GTCTTGCCTCCGCACTTGCAGTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGCAGCGCTCCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: VLPPHLQCPLGQ*SEEMYGSAPCA
Trigger: AGCACAAGGAGCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGGGGACACTGCAAGTGCGGAGGCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000467757.5
ENST00000535189.5
CDS GCA 72 bp AGCAGTGGCGCTTCTCACCAGTGTCCCCTGGGTCAGTaGTCTGAAGAAATGTACGGCAGCGCTCCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: SSGASHQCPLGQ*SEEMYGSAPCA
Trigger: AGCACAAGGAGCGCTGCCGTACATTTCTTCAGAGCACTGACCCAGGGGACACTGGTGAGAAGCGCCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350532.7
CDS GCA 72 bp GCCGACACCAGGGCACATTCAAATCTTGCAGTCTTATaGCGAGATGGGAAAGCTCGACCCATCCCCAACCAG +
Preference number: 6 (lower is better)
Translates to: ADTRAHSNLAVL*RDGKARPIPNQ
Trigger: CTGGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS CAA 90 bp TACCTGCTGTGGTCAGTGAAGCCGACACCAGGGCACATTCAAATCTaGCAGTCTTATGCCGAGATGGGAAAGCTCGACCCATCCCCAACC +
Preference number: 6 (lower is better)
Translates to: YLLWSVKPTPGHIQI*QSYAEMGKLDPSPT
Trigger: GGTTGGGGATGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCTTCACTGACCACAGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS GCA 72 bp AGCTCTTTCACTTCCCATCTCTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGTGTCCCCTGGGTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: SSFTSHLCFDVS*LRTCSVPWVSA
Trigger: AGCACTGACCCAGGGGACACTGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346872.8
ENST00000377944.7
ENST00000377958.6
ENST00000467757.5
ENST00000535189.5
CDS CAA 72 bp GCACAGACTGCTCCTGAGTGCTTTTCAGTTCCGCATTaGTTTGTATATCTTCCATGTCGCTGCCGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: AQTAPECFSVPH*FVYLPCRCRAG
Trigger: CCCGGCCCGGCAGCGACATGGAAGATATACAAACAAATGCGGAACTGAAAAGCACTCAGGAGCAGTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000293068.9
ENST00000346872.8
ENST00000348427.7
ENST00000377944.7
ENST00000377945.7
ENST00000377952.6
ENST00000377958.6
ENST00000394189.6
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS CAA 72 bp TGGTCAGTGAAGCCGACACCAGGGCACATTCAAATCTaGCAGTCTTATGCCGAGATGGGAAAGCTCGACCCA +
Preference number: 6 (lower is better)
Translates to: WSVKPTPGHIQI*QSYAEMGKLDP
Trigger: TGGGTCGAGCTTTCCCATCTCGGCATAAGACTGCAAGATTTGAATGTGCCCTGGTGTCGGCTTCACTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293068.9
ENST00000348427.7
ENST00000583368.1
ENST00000623724.3
CDS GCA 72 bp AGCTCTTTCACTTCCCATCTCTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGAATGTGTCCTAAGATGCCC +
Preference number: 6 (lower is better)
Translates to: SSFTSHLCFDVS*LRTCRMCPKMP
Trigger: GGGCATCTTAGGACACATTCTGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351680.7
ENST00000439167.6
CDS CAA 72 bp CTTGCCTCCGCACTTGCTCCTATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTGTCCACATTTTCCATT +
Preference number: 6 (lower is better)
Translates to: LASALAPMSSSS*AGPSPLSTFSI
Trigger: AATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGCAAGTGCGGAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS GCA 72 bp AGCTCTTTCACTTCCCATCTCTGCTTTGATGTGTCTTaGCTCCGCACTTGCAGTATGGCTTCGCTTATGAAC +
Preference number: 6 (lower is better)
Translates to: SSFTSHLCFDVS*LRTCSMASLMN
Trigger: GTTCATAAGCGAAGCCATACTGCAAGTGCGGAGGCAAGACACATCAAAGCAGAGATGGGAAGTGAAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439016.2
CDS CCA 72 bp CTCCGCACTTGCTCCTATGTCTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCACATTTTCCATTTCATG +
Preference number: 6 (lower is better)
Translates to: LRTCSYVFIFIG*AFSTVHIFHFM
Trigger: CATGAAATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGCAAGTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394189.6
CDS CAA 72 bp TGGAATGGGCGTTCACCTCCTATGTCTTCATCTTCATaGGCTGGGCCTTCTCCACTGTCCACATTTTCCATT +
Preference number: 6 (lower is better)
Translates to: WNGRSPPMSSSS*AGPSPLSTFSI
Trigger: AATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGGTGAACGCCCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377958.6
CDS GCA 72 bp CACACACATCGCAGTTCATCTTTCCACTGGTTGGCCTaGTACTATCGAATGAGACAACATGTCTCTCCAACT +
Preference number: 6 (lower is better)
Translates to: HTHRSSSFHWLA*YYRMRQHVSPT
Trigger: AGTTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGAACTGCGATGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346243.7
ENST00000346872.8
ENST00000348427.7
ENST00000350532.7
ENST00000351680.7
ENST00000377945.7
ENST00000439016.2
ENST00000439167.6
ENST00000467757.5
ENST00000535189.5
ENST00000623724.3
CDS CCA 72 bp GGGTTTCTCCACTCCTATGTCTTCATCTTCATTGGCTaGGCCTTCTCCACTGTCCACATTTTCCATTTCATG +
Preference number: 6 (lower is better)
Translates to: GFLHSYVFIFIG*AFSTVHIFHFM
Trigger: CATGAAATGGAAAATGTGGACAGTGGAGAAGGCCCAGCCAATGAAGATGAAGACATAGGAGTGGAGAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377944.7
CDS CCA 72 bp AGCCTGGACGTGGTTGGTTGCAAAAAGATAGATAGATaGAGATCTAACCCCCGATCAGCCTTCTTTCTGATT +
Preference number: 6 (lower is better)
Translates to: SLDVVGCKKIDR*RSNPRSAFFLI
Trigger: AATCAGAAAGAAGGCTGATCGGGGGTTAGATCTCCATCTATCTATCTTTTTGCAACCAACCACGTCCAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583368.1
CDS TCA 72 bp CACTGGAATGGGCGTTCACCAGTATGGCTTCGCTTATaGACCATTAAGACATTGAAGCTGATGCAGGATAAT +
Preference number: 6 (lower is better)
Translates to: HWNGRSPVWLRL*TIKTLKLMQDN
Trigger: ATTATCCTGCATCAGCTTCAATGTCTTAATGGTTCATAAGCGAAGCCATACTGGTGAACGCCCATTCCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293068.9
ENST00000346243.7
ENST00000346872.8
ENST00000350532.7
ENST00000351680.7
ENST00000439167.6
ENST00000535189.5
ENST00000623724.3
CDS TCA 72 bp GTTCATCTTTCCACTGGTTGGCCTGCTACTATCGAATaGGACAACATGTCTCTCCAACTTAATGTTTTCATA +
Preference number: 6 (lower is better)
Translates to: VHLSTGWPATIE*DNMSLQLNVFI
Trigger: TATGAAAACATTAAGTTGGAGAGACATGTTGTCTCATTCGATAGTAGCAGGCCAACCAGTGGAAAGATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000293068.9
ENST00000346243.7
ENST00000346872.8
ENST00000348427.7
ENST00000350532.7
ENST00000351680.7
ENST00000377945.7
ENST00000439016.2
ENST00000439167.6
ENST00000467757.5
ENST00000535189.5
ENST00000623724.3
CDS TCA 72 bp CGATCAGCCTTCTTTCTGATTCTGAGTAACTGCGTGTaGCACCTGCAGACTGATATAATTCTTAACAACTTT +
Preference number: 6 (lower is better)
Translates to: RSAFFLILSNCV*HLQTDIILNNF
Trigger: AAAGTTGTTAAGAATTATATCAGTCTGCAGGTGTCACACGCAGTTACTCAGAATCAGAAAGAAGGCTGATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583368.1