RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IKZF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185811

Ensembl transcript IDs: ENST00000331340.8, ENST00000343574.9, ENST00000346667.8, ENST00000349824.8, ENST00000357364.8, ENST00000359197.9, ENST00000413698.5, ENST00000426121.1, ENST00000438033.5, ENST00000439701.2, ENST00000440768.6, ENST00000462201.1, ENST00000471793.1, ENST00000484847.6, ENST00000492119.1, ENST00000492782.6, ENST00000612658.4, ENST00000615491.4, ENST00000641948.1, ENST00000642219.1, ENST00000645066.1, ENST00000646110.1

Found 2097 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCTCGGGAGGCTCAGGCCATCTGAGCAGCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAAGGCTCTAGCCCGGCGTCTCCCTCC +
Preference number: 1 (lower is better)
Translates to: SLGRLRPSEQPPQSQ*IQDDPKGSSPASPS
Trigger: GGAGGGAGACGCCGGGCTAGAGCCTTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTCCCGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 90 bp AGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCAGTGAATCCAGGACGATCCCAAAGG +
Preference number: 1 (lower is better)
Translates to: SLLLRGSKPREAQAI*AASAKPVNPGRSQR
Trigger: CCTTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp AAGTGCAGCCTCTCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGC +
Preference number: 1 (lower is better)
Translates to: KCSLSALDACSSKLA*AQVVGPAVSWHLGG
Trigger: GCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGAGAGGCTGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CATGTCATAGCACGGATGGGCGGGGTTCTCACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCGAAGG +
Preference number: 1 (lower is better)
Translates to: HVIARMGGVLTCSAI*LLFPRGSGGITLRR
Trigger: CCTTCGGAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCCCATCCGTGCTATGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CTTCAGTGCCTCCATGTCATAGCACGGATGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATT +
Preference number: 1 (lower is better)
Translates to: LQCLHVIARMGGVLT*SAICLLFPRGSGGI
Trigger: AATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCCCATCCGTGCTATGACATGGAGGCACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp GTGAGGGCCCTGGGCCCGGCCACTCACAGAATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATGTATCTCTTGTTGCCCTCCATCTCC +
Preference number: 1 (lower is better)
Translates to: VRALGPATHRMTEAC*SGELEMYLLLPSIS
Trigger: GGAGATGGAGGGCAACAAGAGATACATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCGGGCCCAGGGCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp TGCTTGTTGGGATTAGAATCTCCACACACCTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGGATGGGCGGGGTTCTCACCTGCAGT +
Preference number: 1 (lower is better)
Translates to: CLLGLESPHTFLGLQ*LHVIARMGGVLTCS
Trigger: ACTGCAGGTGAGAACCCCGCCCATCCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CCCACGTCCAGCACTGTTGTAGATGGGAGGTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAGACACCACATGTGTTCCCAAGTGGT +
Preference number: 1 (lower is better)
Translates to: PTSSTVVDGRYVVLN*CAGHIKTPHVFPSG
Trigger: ACCACTTGGGAACACATGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCCCATCTACAACAGTGCTGGACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp CAAATCCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTG +
Preference number: 1 (lower is better)
Translates to: QIQTQHCLVQSSLCC*REREGGSPCAFPGV
Trigger: CACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp GATCTGGTGGCATTACTCTCCGAAGGTCTGGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATCCTACAGGTGCAGAGCCAGCCATCC +
Preference number: 1 (lower is better)
Translates to: DLVALLSEGLAQSLN*PVHSNILQVQSQPS
Trigger: GGATGGCTGGCTCTGCACCTGTAGGATATTGGAATGCACAGGGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTAATGCCACCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp ATTGTGAGGGCCCTGGGCCCGGCCACTCACAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAAATGTATCTCTTGTTGCCCTCCATC +
Preference number: 1 (lower is better)
Translates to: IVRALGPATHRMTEA*CSGELEMYLLLPSI
Trigger: GATGGAGGGCAACAAGAGATACATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCGGGCCCAGGGCCCTCACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp TTACAAATCCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGG +
Preference number: 1 (lower is better)
Translates to: LQIQTQHCLVQSSLC*WREREGGSPCAFPG
Trigger: CCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGGATTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CTGCGCTGGCCACATCAAGACACCACATGTGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCATCTCTTCTCCCTCTCATATTGGGAT +
Preference number: 1 (lower is better)
Translates to: LRWPHQDTTCVPKWY*SCPEAHLFSLSYWD
Trigger: ATCCCAATATGAGAGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATACCACTTGGGAACACATGTGGTGTCTTGATGTGGCCAGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp AGTGATTTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGCTACTGGCGTCTATTGGGTAGCCAC +
Preference number: 1 (lower is better)
Translates to: SDFSSQGTVGDVWRV*VVNSGCYWRLLGSH
Trigger: GTGGCTACCCAATAGACGCCAGTAGCACCCCGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp GAACTGCTGCGCTGGCCACATCAAGACACCACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAGGCCCATCTCTTCTCCCTCTCATAT +
Preference number: 1 (lower is better)
Translates to: ELLRWPHQDTTCVPK*YCSCPEAHLFSLSY
Trigger: ATATGAGAGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATACCACTTGGGAACACATGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp CAGCACTGTTGTAGATGGGAGGTACGTTGTGCTGAACTGCTGCGCTaGCCACATCAAGACACCACATGTGTTCCCAAGTGGTATTGCAGC +
Preference number: 1 (lower is better)
Translates to: QHCCRWEVRCAELLR*PHQDTTCVPKWYCS
Trigger: GCTGCAATACCACTTGGGAACACATGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCCCATCTACAACAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CAGTTACAAATCCAAACACAACATTGTCTGGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCT +
Preference number: 1 (lower is better)
Translates to: QLQIQTQHCLVQSSL*CWREREGGSPCAFP
Trigger: AGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGGATTTGTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp TGGCTCAGTCCCTCAATTGCCCTGTGCATTCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCT +
Preference number: 1 (lower is better)
Translates to: WLSPSIALCIPISYR*RASHPMYVWTHMLA
Trigger: AGCCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATGCACAGGGCAATTGAGGGACTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 90 bp ACACTCTTTAGGTACAAATTACAGAAGGGATATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACATCCTGGGAAGCTGGGGTGTCAGGGA +
Preference number: 1 (lower is better)
Translates to: TLFRYKLQKGYGARS*DPGFPHPGKLGCQG
Trigger: TCCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATATCCCTTCTGTAATTTGTACCTAAAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp TGGCATTACTCTCCGAAGGTCTGGCTCAGTCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTAT +
Preference number: 1 (lower is better)
Translates to: WHYSPKVWLSPSIAL*IPISYRCRASHPMY
Trigger: ATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATGCACAGGGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTAATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 90 bp ACATCAAGACACCACATGTGTTCCCAAGTGGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCTCTCATATTGGGATCTCATTGGGAG +
Preference number: 1 (lower is better)
Translates to: TSRHHMCSQVVLQLS*GPSLLPLILGSHWE
Trigger: CTCCCAATGAGATCCCAATATGAGAGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATACCACTTGGGAACACATGTGGTGTCTTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp AGGGCTTCCCAGACATTTGATTGGTTTAGAATTCATTTGGGTCAGTaGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGTTGGT +
Preference number: 1 (lower is better)
Translates to: RASQTFDWFRIHLGQ*FSPRSDFSSQGTVG
Trigger: ACCAACTGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCTAAACCAATCAAATGTCTGGGAAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp TTTCTTGGAGGGCTTCCCAGACATTTGATTGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: FLGGLPRHLIGLEFI*VSGSPPGVISPRRG
Trigger: TCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCTAAACCAATCAAATGTCTGGGAAGCCCTCCAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATaGTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGTTTGAAAGC +
Preference number: 1 (lower is better)
Translates to: PTGAEPAILCMCGHT*WLAFTVKSFNMFES
Trigger: GCTTTCAAACATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp CTGTTACCCTCCGGTCTCCAATATTTACTTCAAACACAACGAGAGTaGATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGAC +
Preference number: 1 (lower is better)
Translates to: LLPSGLQYLLQTQRE*MESRHTVVHSGTQD
Trigger: GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGGAGGGTAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp ACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTaGCTTGCCTTTACAGTAAAGAGCTTCAACATGTTTGAAAGCTTG +
Preference number: 1 (lower is better)
Translates to: TGAEPAILCMCGHTC*LAFTVKSFNMFESL
Trigger: CAAGCTTTCAAACATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp ACTTGGATAAGGCGCATCTTTCTCTGTGATTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATCCTCTGTCTCTCTTCCTTCACTCAG +
Preference number: 1 (lower is better)
Translates to: TWIRRIFLCDCILKE*CLKPLILCLSSFTQ
Trigger: CTGAGTGAAGGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp ATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTaGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACAT +
Preference number: 1 (lower is better)
Translates to: IPISYRCRASHPMYV*THMLACLYSKELQH
Trigger: ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp GTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCTCCACACACCTTCCTCGGGCTTCAG +
Preference number: 1 (lower is better)
Translates to: VMTLMIDSINLEGDP*LLGLESPHTFLGLQ
Trigger: CTGAAGCCCGAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 90 bp TCTCACCTTAGAGATATTAACTTGGATAAGGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTGCTGTCTAAAGCCCTTGATCCTCTG +
Preference number: 1 (lower is better)
Translates to: SHLRDINLDKAHLSL*LHIEGVLSKALDPL
Trigger: CAGAGGATCAAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAAGGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp ACCTTAGAGATATTAACTTGGATAAGGCGCATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGTCTAAAGCCCTTGATCCTCTGTCTC +
Preference number: 1 (lower is better)
Translates to: TLEILTWIRRIFLCD*ILKECCLKPLILCL
Trigger: GAGACAGAGGATCAAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR TCA 90 bp ACAGTAAAGAGCTTCAACATGTTTGAAAGCTTGGTTTCAAACAGGTaGGCTCTGTGTGTTAGCAACAGAGATGCTGGGCTTCACATATTT +
Preference number: 1 (lower is better)
Translates to: TVKSFNMFESLVSNR*ALCVSNRDAGLHIF
Trigger: AAATATGTGAAGCCCAGCATCTCTGTTGCTAACACACAGAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCTTTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 90 bp GCAGCAATTTTGTTTATTCCCGTTTCCAAATGCCACACCCTTCTGTaGGCAGAGAAATCCATGACTCAAGAATGGTATCTTTGTAAACTC +
Preference number: 1 (lower is better)
Translates to: AAILFIPVSKCHTLL*AEKSMTQEWYLCKL
Trigger: GAGTTTACAAAGATACCATTCTTGAGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCATTTGGAAACGGGAATAAACAAAATTGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 90 bp CAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTCTGTGATTGCATATTGAAGGAGTGC +
Preference number: 1 (lower is better)
Translates to: QQTDSKKALTLEILT*IRRIFLCDCILKEC
Trigger: GCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 90 bp AAAGGCAGTGAGAGGAAAGGGCAAAGCAGTTTAGAAAAGAATTCCTaGAATCACTATTTACAGTTCTGGTTTGAGCTTTGTTTGAATTCC +
Preference number: 1 (lower is better)
Translates to: KGSERKGQSSLEKNS*NHYLQFWFELCLNS
Trigger: GGAATTCAAACAAAGCTCAAACCAGAACTGTAAATAGTGATTGCAGGAATTCTTTTCTAAACTGCTTTGCCCTTTCCTCTCACTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: REDSLLLRGSKPREAQAIQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: REDSLLLRGSKPREAQAISLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 2 (lower is better)
Translates to: REDSLLLRGSKPREAQAILCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 2 (lower is better)
Translates to: REDSLLLRGSKPREAQAIVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: SALDACSSKLAWAQVVGPRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp CTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTaGGCTCCAGCAGCGATGCACCACAGAATAACGGCCTGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: LRSEKVLRAPSRNST*APAAMHHRITAWRP
Trigger: AGGCCTCCAGGCCGTTATTCTGTGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: SALDACSSKLAWAQVVGPRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: QRSGETSRKVAVLDAPNASSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: SGETSRKVAVLDAPNAALRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: SGETSRKVAVLDAPNAALQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 2 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 2 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp ATTTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTaGTCAATTCGGGGTGCTACTGGCGTCTATTGGGTAGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: ISPRRGQLVMSGEFG*SIRGATGVYWVATR
Trigger: CCTGGTGGCTACCCAATAGACGCCAGTAGCACCCCGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 2 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 2 (lower is better)
Translates to: APQICPREDSLLLRGSKPKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp GCTGTCCTGAGGCCCATCTCTTCTCCCTCTCATATTGGGATCTCATaGGGAGAAAGTCTAGGCAGATTCCTGCTCTGCTGGGCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: AVLRPISSPSHIGIS*GESLGRFLLCWAFS
Trigger: AGAGAAGGCCCAGCAGAGCAGGAATCTGCCTAGACTTTCTCCCAATGAGATCCCAATATGAGAGGGAGAAGAGATGGGCCTCAGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCACACAGAATAACGGCCTaGAGGCCTGCAATTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RSEKVLRAPSRNSTLAPAHRITA*RPAIFS
Trigger: AGAGAAAATTGCAGGCCTCCAGGCCGTTATTCTGTG...TGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp TTTTCTTGGAGGGCTTCCCAGACATTTGATTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: FSWRASQTFDWFRIH*GQWFSPRSDFSSQG
Trigger: CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCTAAACCAATCAAATGTCTGGGAAGCCCTCCAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp ATGACTGAAGCATGCTGCAGTGGAGAACTGGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCACCCTCAAGACTGGGACTTAGAATTC +
Preference number: 2 (lower is better)
Translates to: MTEACCSGELEMYLL*PSISTHPQDWDLEF
Trigger: GAATTCTAAGTCCCAGTCTTGAGGGTGGGTGGAGATGGAGGGCAACAAGAGATACATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 2 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 2 (lower is better)
Translates to: TCSAICLLFPRGSGGITLCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWIEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 2 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 2 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWIGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWIVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 2 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWISSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp ACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACACACCTTCCTCGGGCTTCAGTGCCTC +
Preference number: 2 (lower is better)
Translates to: TLMIDSINLEGDPCL*GLESPHTFLGLQCL
Trigger: GAGGCACTGAAGCCCGAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TTTGGTTTAACAGCTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTCAGTTCTTTGTTGGTaGCAGAAAATATGGCCATTT +
Preference number: 2 (lower is better)
Translates to: FGLTAQIREGPAGTKQEQSVLCW*QKIWPF
Trigger: AAATGGCCATATTTTCTGTCACCAACAAAGAACTGA...CTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAGCTGTTAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWIRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 2 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATGCAGCGATTCTTACAGACTGAAGGCTTCACTGAAGGGTCTGCTTCAACATATAACGGCCTGGAGGCCTaGAATTTTCTCTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: MQRFLQTEGFTEGSASTYNGLEA*NFLFSV
Trigger: AACTGAGAAGAGAAAATTGCAGGCCTCCAGGCCGTT...ATATGTTGAAGCAGACCCTTCAGTGAAGCCTTCAGTCTGTAAGAATCGCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWILGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp ATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCACACACCTTCCTCGGGCTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: MTLMIDSINLEGDPC*LGLESPHTFLGLQC
Trigger: GCACTGAAGCCCGAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 2 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 2 (lower is better)
Translates to: QRECMESRHTVVHSGTQDSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CAA 90 bp GAGATATTAACTTGGATAAGGCGCATCTTTCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAGCCCTTGATCCTCTGTCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: EILTWIRRIFLCDCI*KECCLKPLILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKLPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 2 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWICALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 2 (lower is better)
Translates to: LQQTDSKKALTLEILTWIDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 2 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CAGCGATTCTTACAGACTGAAGGCTTCACTGAAGGGTCTGCTTCAACATATGCTGTAACTTCTATAGGCTaGAAAAGTAGCCAATCTAGT +
Preference number: 2 (lower is better)
Translates to: QRFLQTEGFTEGSASTYAVTSIG*KSSQSS
Trigger: ACTAGATTGGCTACTTTTCCAGCCTATAGAAGTTAC...AGCATATGTTGAAGCAGACCCTTCAGTGAAGCCTTCAGTCTGTAAGAATCGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR CAA 90 bp TTACGCCAGTGTGGACTTCACGGGATAGGGCAGACAGAGTATTCGTaGCATTTATTTGTTCTATCACTACAGAAGAAGCATTTCAAAATG +
Preference number: 2 (lower is better)
Translates to: LRQCGLHGIGQTEYS*HLFVLSLQKKHFKM
Trigger: CATTTTGAAATGCTTCTTCTGTAGTGATAGAACAAATAAATGCAACGAATACTCTGTCTGCCCTATCCCGTGAAGTCCACACTGGCGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 2 (lower is better)
Translates to: MYVWTHMLACLYSKELQHRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 2 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR TCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 2 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: ISGSSFSRKILRFYYVANSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp CTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCAGTGAATCCAGGACGA +
Preference number: 3 (lower is better)
Translates to: LRGSKPREAQAI*AASAKPVNPGR
Trigger: TCGTCCTGGATTCACTGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp AGGCTCAGGCCATCTGAGCAGCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAAGGCTCTAGCCCGGCG +
Preference number: 3 (lower is better)
Translates to: RLRPSEQPPQSQ*IQDDPKGSSPA
Trigger: CGCCGGGCTAGAGCCTTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp CTCTCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: LSALDACSSKLA*AQVVGPAVSWH
Trigger: GTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 3 (lower is better)
Translates to: TCSAICLLFPRGSGGITLWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 3 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 3 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp GCACGGATGGGCGGGGTTCTCACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGATCTGGTGGCATTACT +
Preference number: 3 (lower is better)
Translates to: ARMGGVLTCSAI*LLFPRGSGGIT
Trigger: AGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCCCATCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: SGETSRKVAVLDAPNAALRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 3 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: QTQHCLVQSSLC*WREREGGSPCA
Trigger: AGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp CTCCATGTCATAGCACGGATGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCT +
Preference number: 3 (lower is better)
Translates to: LHVIARMGGVLT*SAICLLFPRGS
Trigger: AGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCCCATCCGTGCTATGACATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp GGATTAGAATCTCCACACACCTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGGATGGGCGGGGTTCTC +
Preference number: 3 (lower is better)
Translates to: GLESPHTFLGLQ*LHVIARMGGVL
Trigger: GAGAACCCCGCCCATCCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAAGGTGTGTGGAGATTCTAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp TGTGAGGGCCCTGGGCCCGGCCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGAACTGGAAATGTATCT +
Preference number: 3 (lower is better)
Translates to: CEGPGPGHSQND*SMLQWRTGNVS
Trigger: AGATACATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCGGGCCCAGGGCCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp ATCCAAACACAACATTGTCTGGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGT +
Preference number: 3 (lower is better)
Translates to: IQTQHCLVQSSL*CWREREGGSPC
Trigger: ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp ACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: TQHCLVQSSLCC*REREGGSPCAF
Trigger: AAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp CTGGGCCCGGCCACTCACAGAATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATGTATCTCTTGTTGCCC +
Preference number: 3 (lower is better)
Translates to: LGPATHRMTEAC*SGELEMYLLLP
Trigger: GGGCAACAAGAGATACATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCGGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp GCCCTGGGCCCGGCCACTCACAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAAATGTATCTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: ALGPATHRMTEA*CSGELEMYLLL
Trigger: CAACAAGAGATACATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCGGGCCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp GATTCCTGCTCTGCTGGGCCTTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCAGACAGAGTATTCGTT +
Preference number: 3 (lower is better)
Translates to: DSCSAGPSLTPV*TSRDRADRVFV
Trigger: AACGAATACTCTGTCTGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp TCATTGGGAGAAAGTCTAGGCAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGTGTGGACTTCACGGGA +
Preference number: 3 (lower is better)
Translates to: SLGESLGRFLLC*AFSYASVDFTG
Trigger: TCCCGTGAAGTCCACACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCCTAGACTTTCTCCCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp TGTAGATGGGAGGTACGTTGTGCTGAACTGCTGCGCTaGCCACATCAAGACACCACATGTGTTCCCAAGTGG +
Preference number: 3 (lower is better)
Translates to: CRWEVRCAELLR*PHQDTTCVPKW
Trigger: CCACTTGGGAACACATGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCCCATCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp AGGTACAAATTACAGAAGGGATATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACATCCTGGGAAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: RYKLQKGYGARS*DPGFPHPGKLG
Trigger: CCCCAGCTTCCCAGGATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATATCCCTTCTGTAATTTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp GCATTACTCTCCGAAGGTCTGGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATCCTACAGGTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: ALLSEGLAQSLN*PVHSNILQVQS
Trigger: GCTCTGCACCTGTAGGATATTGGAATGCACAGGGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp ATCTCATTGGGAGAAAGTCTAGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCCAGTGTGGACTTCACG +
Preference number: 3 (lower is better)
Translates to: ISLGESLGRFLL*WAFSYASVDFT
Trigger: CGTGAAGTCCACACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCCTAGACTTTCTCCCAATGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp AGCACTGTTGTAGATGGGAGGTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAGACACCACATGTGTTC +
Preference number: 3 (lower is better)
Translates to: STVVDGRYVVLN*CAGHIKTPHVF
Trigger: GAACACATGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCCCATCTACAACAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp AGTGATTTCTCCTCGCAGGGGACAGTTGGTGATGTCTaGAGAGTTTGGGTTGTCAATTCGGGGTGCTACTGG +
Preference number: 3 (lower is better)
Translates to: SDFSSQGTVGDV*RVWVVNSGCYW
Trigger: CCAGTAGCACCCCGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 3 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: MYVWTHMLACLYSKELQHPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 3 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 3 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCATGTTCAGTTCTTTGTaGGTGACAGAAAATATGGCC +
Preference number: 3 (lower is better)
Translates to: QIREGPAGTKQEQYVGSSMFSSL*VTENMA
Trigger: GGCCATATTTTCTGTCACCAACAAAGAACTGAACAT...GCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR TCA 72 bp CACCACATGTGTTCCCAAGTGGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCTCTCATATTGGGATCT +
Preference number: 3 (lower is better)
Translates to: HHMCSQVVLQLS*GPSLLPLILGS
Trigger: AGATCCCAATATGAGAGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATACCACTTGGGAACACATGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp CCCTCAATTGCCCTGTGCATTCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATGTATGTGTGGACACAC +
Preference number: 3 (lower is better)
Translates to: PSIALCIPISYR*RASHPMYVWTH
Trigger: GTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp TCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTaGACACACATGCTGGCTTGCCTTTACAGTAAAGAG +
Preference number: 3 (lower is better)
Translates to: SYRCRASHPMYV*THMLACLYSKE
Trigger: CTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: QRECMESRHTVVHSGTQDNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 3 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 3 (lower is better)
Translates to: TCSAICLLFPRGSGGITLLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AGCTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCACCATGTTCAGTTCTTaGTTGGTGACAGAAAATATG +
Preference number: 3 (lower is better)
Translates to: SSDQRRSCGHQAGTVRWLTMFSS*LVTENM
Trigger: CATATTTTCTGTCACCAACAAAGAACTGAACATGGT...GAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR TCA 72 bp AGAGGTGTTGAGGGCAAAGGGGGCAATTCTTCATCATaGCCACAAGGTGGTGATATTGGCCCAGAACAGTTT +
Preference number: 3 (lower is better)
Translates to: RGVEGKGGNSSS*PQGGDIGPEQF
Trigger: AAACTGTTCTGGGCCAATATCACCACCTTGTGGTCATGATGAAGAATTGCCCCCTTTGCCCTCAACACCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492782.6
3UTR CCA 72 bp CAGACATTTGATTGGTTTAGAATTCATTTGGGTCAGTaGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGG +
Preference number: 3 (lower is better)
Translates to: QTFDWFRIHLGQ*FSPRSDFSSQG
Trigger: CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCTAAACCAATCAAATGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 3 (lower is better)
Translates to: LQQTDSKKALTLEILTWIAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 3 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 3 (lower is better)
Translates to: QRECMESRHTVVHSGTQDLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 3 (lower is better)
Translates to: QRECMESRHTVVHSGTQDPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 3 (lower is better)
Translates to: TCSAICLLFPRGSGGITLRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 3 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 3 (lower is better)
Translates to: QRECMESRHTVVHSGTQDGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp CAAAGGGGGCAATTCTTCATCATGACCACAAGGTGGTaGTATTGGCCCAGAACAGTTTGGTTGCTGTTTTGC +
Preference number: 3 (lower is better)
Translates to: QRGQFFIMTTRW*YWPRTVWLLFC
Trigger: GCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTCATGATGAAGAATTGCCCCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
3UTR GCA 72 bp AGGCGCATCTTTCTCTGTGATTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATCCTCTGTCTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: RRIFLCDCILKE*CLKPLILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: ISGSSFSRKILRFYYVANWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp TCCGGTCTCCAATATTTACTTCAAACACAACGAGAGTaGATGGAATCTAGGCACACAGTAGTACACAGCGGT +
Preference number: 3 (lower is better)
Translates to: SGLQYLLQTQRE*MESRHTVVHSG
Trigger: ACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 3 (lower is better)
Translates to: LQQTDSKKALTLEILTWIPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 3 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 3 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 3 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 3 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 3 (lower is better)
Translates to: LQQTDSKKALTLEILTWIGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 3 (lower is better)
Translates to: LQQTDSKKALTLEILTWIEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 3 (lower is better)
Translates to: LQQTDSKKALTLEILTWIEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp AGAGATATTAACTTGGATAAGGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTGCTGTCTAAAGCCCTT +
Preference number: 3 (lower is better)
Translates to: RDINLDKAHLSL*LHIEGVLSKAL
Trigger: AAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp TTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCTCCACACACCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LMIDSINLEGDP*LLGLESPHTFL
Trigger: GAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR GCA 72 bp ATATTAACTTGGATAAGGCGCATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGTCTAAAGCCCTTGATC +
Preference number: 3 (lower is better)
Translates to: ILTWIRRIFLCD*ILKECCLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp GACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTCTGTGATTGCATATTG +
Preference number: 3 (lower is better)
Translates to: DSKKALTLEILT*IRRIFLCDCIL
Trigger: CAATATGCAATCACAGAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTGGTATGTGAAGCAATaGGTGCTAGGACTTTACCCT +
Preference number: 3 (lower is better)
Translates to: ISGSSFSRKILRFYYVANWYVKQ*VLGLYP
Trigger: AGGGTAAAGTCCTAGCACCAATTGCTTCACATACCA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp TATATAGTGAGGGTAGGTAAAGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGCTACAAACAGATGTAC +
Preference number: 3 (lower is better)
Translates to: YIVRVGKETYQH*EIQACGYKQMY
Trigger: GTACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTCTTTACCTACCCTCACTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CCA 72 bp TATGTACAATTTCCTCTCTGTTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGACAAGTACTGTAAATAT +
Preference number: 3 (lower is better)
Translates to: YVQFPLCCFISP*DSVGEDKYCKY
Trigger: ATATTTACAGTACTTGTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTGTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 3 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp CAACAGAGATGCTGGGCTTCACATATTTCATTGAGTTaGAAATTAATGACTGTTCTAAATCACTCCTTTATG +
Preference number: 3 (lower is better)
Translates to: QQRCWASHISLS*KLMTVLNHSFM
Trigger: CATAAAGGAGTGATTTAGAACAGTCATTAATTTTCAACTCAATGAAATATGTGAAGCCCAGCATCTCTGTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR TCA 72 bp ACTTCTATAGGCTGGAAAAGTAGCCAATCTAGTTTGTaGGCAAAAAGATGTACTTTGATACTGTTAAATTCC +
Preference number: 3 (lower is better)
Translates to: TSIGWKSSQSSL*AKRCTLILLNS
Trigger: GGAATTTAACAGTATCAAAGTACATCTTTTTGCTCACAAACTAGATTGGCTACTTTTCCAGCCTATAGAAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTCCTCAGGTGGCCAGTaGGGGCGTCCCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVSSGGQ*GRPSGG
Trigger: GCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGGGCTCCCTCTGCCCTaGCAGGCTTGCCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPGLPLP*QACPPR
Trigger: GCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAISTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCCTCAGGTGGCCAGTaGGGGCGTCCCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSSGGQ*GRPSGG
Trigger: GCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGGGCTCCCTCTGCCCTaGCAGGCTTGCCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSGLPLP*QACPPR
Trigger: GCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAGCGATGCACCACAAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SCGHQAGTVRWLQQRCTTSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...TGTGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAISLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKARGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAISCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATCCTCAGGTGGCCAGTaGGGGCGTCCCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARSSGGQ*GRPSGG
Trigger: GCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGTTTACCAACGGAGTaGGTCCTCAGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGLPTE*VLRWPV
Trigger: CACTGGCCACCTGAGGACGCACTCCGTTGGTAAACC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331340.8
ENST00000343574.9
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAISPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCCGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVPTKPS*LGPCGS
Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCGG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCAGGGATCTTGGTGCCTaGCTACAGGGCCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIRDLGA*LQGLCV
Trigger: GACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCT...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439701.2
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVLWGQD*SSGAKS
Trigger: GCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCLWGQD*SSGAKS
Trigger: GCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAATGAGGCCCCGCACTaGTTGCACTGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPNEAPH*LHWKGR
Trigger: ACGGCCCTTCCAGTGCAATCAGTGCGGGGCCTCATT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTAATGAGGCCCCGCACTaGTTGCACTGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLNEAPH*LHWKGR
Trigger: ACGGCCCTTCCAGTGCAATCAGTGCGGGGCCTCATT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCCCGGAATGCAGCTTaGTGTGCCGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVPRNAA*CAGAGC
Trigger: GCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCCTCAGGTGGCCAGTaGGGGCGTCCCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSSGGQ*GRPSGG
Trigger: GCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAAGGTAGTGAAATTGTaGGGGCCCTGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLKVVKL*GPWARP
Trigger: TGGCCGGGCCCAGGGCCCTCACAATTTCACTACCTT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGGCTCCCTCTGCCCTaGCAGGCTTGCCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGLPLP*QACPPR
Trigger: GCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAGGCCCCGCACTGATTaGACTGGAAGGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVRPRTD*TGRAVL
Trigger: GAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFSRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCCGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFPTKPS*LGPCGS
Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCGG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTGGGAGGGATCTTGGTaGCTGGCTACAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLWEGSW*LATGPL
Trigger: CAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: QIREGPAGTKQEQYVGSSVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...GCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGCAGGTTGCCCTTCTaGGTGAATGAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPSRLPF*VNEAPH
Trigger: GTGCGGGGCCTCATTCACCCAGAAGGGCAACCTGCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCSPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCAGACCCAGCCACCTaGGAGGGATCTTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSDPAT*EGSWCL
Trigger: CAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTCAGACCCAGCCACCTaGGAGGGATCTTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSDPAT*EGSWCL
Trigger: CAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSLWGQD*SSGAKS
Trigger: GCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCCCGGAATGCAGCTTaGTGTGCCGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRPRNAA*CAGAGC
Trigger: GCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAGGCCCCGCACTGATTaGACTGGAAGGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLRPRTD*TGRAVL
Trigger: GAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGGCCCCGCACTGATTaGACTGGAAGGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWRPRTD*TGRAVL
Trigger: GAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNATRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVSPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIYVVLN*CAGHIK
Trigger: CTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCTCGGGAAGAGAAGTaGAATGCAGGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPREEK*NAGRQL
Trigger: CAGCTGCCTGCCTGCATTGCACTTCTCTTCCCGAGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCCTCGGGAAGAGAAGTaGAATGCAGGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSPREEK*NAGRQL
Trigger: CAGCTGCCTGCCTGCATTGCACTTCTCTTCCCGAGG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTGGGAGGGATCTTGGTaGCTGGCTACAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVWEGSW*LATGPL
Trigger: CAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAISLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPKAELP*SLWEPF
Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLKAELP*SLWEPF
Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVKAELP*SLWEPF
Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
3UTR CAA 72 bp ATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: MHVARSWPGHRL*ALLCLGTWVAA
Trigger: TGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATCCTCAGGTGGCCAGTaGGGGCGTCCCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSSGGQ*GRPSGG
Trigger: GCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAILKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCGGCCACTCACAGAATaGCTGAAGCATGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLRPLTE*LKHAAV
Trigger: CACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGAAGGTAGTGAAATTGTaGGGGCCCTGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAKVVKL*GPWARP
Trigger: TGGCCGGGCCCAGGGCCCTCACAATTTCACTACCTT...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp GGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAGCGATGCACCATCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPAGTKQEQYVGSSSDAPSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...TGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGGCCCCGCACTGATTaGACTGGAAGGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRPRTD*TGRAVL
Trigger: GAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTTACCAACGGAGTaGGTCCTCAGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWGLPTE*VLRWPV
Trigger: CACTGGCCACCTGAGGACGCACTCCGTTGGTAAACC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLCPEGP*FPSSCG
Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKARRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCCTCGGGAAGAGAAGTaGAATGCAGGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLPREEK*NAGRQL
Trigger: CAGCTGCCTGCCTGCATTGCACTTCTCTTCCCGAGG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCACACTCCACCAGGGTaGAGAGAAAGGTGGAACCAC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLHTPPG*RERWNH
Trigger: GTGGTTCCACCTTTCTCTGCACCCTGGTGGAGTGTG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439701.2
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp GGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAGCGATGCACCACTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: GPAGTKQEQYVGSSSDAPLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...TGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGCAGGTTGCCCTTCTaGGTGAATGAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRSRLPF*VNEAPH
Trigger: GTGCGGGGCCTCATTCACCCAGAAGGGCAACCTGCT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERESTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGACCTGGGAGGGATCTTaGTGCCTGGCTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRTWEGS*CLATGP
Trigger: AGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
3UTR CAA 72 bp GAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTaGGCTCCAGCAGCGATGCACCACAGAATAACGGCC +
Preference number: 4 (lower is better)
Translates to: EKVLRAPSRNST*APAAMHHRITA
Trigger: GGCCGTTATTCTGTGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACCCCGGAATGCAGCTTaGTGTGCCGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARPRNAA*CAGAGC
Trigger: GCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCACAAATCCAGACTTTaGGGACCTAGGGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFHKSRL*GPRAAR
Trigger: CCGAGCAGCCCTAGGTCCTCAAAGTCTGGATTTGTG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCGCCAAGGCCAAGTaGGAGCTGCCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLAKAK*ELPFPH
Trigger: GTGTGGAAAAGGCAGCTCTCACTTGGCCTTGGCGAG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKARLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVSRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAACGCGGAGCGCGTCCTaGGAGTTCTCGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKTRSAS*EFSEAA
Trigger: CGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRSPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLYVVLN*CAGHIK
Trigger: CTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: DHKVVILAQNSLVAVLRGVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...CCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp GTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VAVLRGKASRPSSRLCEKAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...CTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCSLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSRFLLC*AFSYAS
Trigger: ACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCT...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCGCAGGAACAGTACGTTaGCTCCAGCAGCGATGCACC +
Preference number: 4 (lower is better)
Translates to: QIREGPAGTKQEQYVGSSAGTVR*LQQRCT
Trigger: GGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGC...GCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp TCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAGCGATGCACCACAGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SCGHQAGTVRWLQQRCTTGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...TGTGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAATGAGGCCCCGCACTaGTTGCACTGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARNEAPH*LHWKGR
Trigger: ACGGCCCTTCCAGTGCAATCAGTGCGGGGCCTCATT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCCCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLHSQND*SMLQWR
Trigger: TCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCHSQND*SMLQWR
Trigger: TCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSHSQND*SMLQWR
Trigger: TCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGGCCACTCACAGAATaGCTGAAGCATGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRPLTE*LKHAAV
Trigger: CACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCAAGGTAGTGAAATTGTaGGGGCCCTGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVKVVKL*GPWARP
Trigger: TGGCCGGGCCCAGGGCCCTCACAATTTCACTACCTT...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCACAAATCCAGACTTTaGGGACCTAGGGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAHKSRL*GPRAAR
Trigger: CCGAGCAGCCCTAGGTCCTCAAAGTCTGGATTTGTG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp ACGTTGGCTCCAGCAGCGATGCACCACAGAATAACGGCCTGGAGGCCTGCAATTAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TLAPAAMHHRITAWRPAIRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...AATTGCAGGCCTCCAGGCCGTTATTCTGTGGTGCATCGCTGCTGGAGCCAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNASRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCAGTCTTGGCAGCTGTTaGTCGGGGACGCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSLGSC*SGTPRA
Trigger: AGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVYVVLN*CAGHIK
Trigger: CTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAIMTEAC*SGELEM
Trigger: CATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACCGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTPTKPS*LGPCGS
Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCGG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCCGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLPTKPS*LGPCGS
Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCGG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGACCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp GCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGATAGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: AVLRGKASRPSSRLCEKIVLPRW*RGPRGS
Trigger: CGATCCCCGAGGACCTCTCCACCACCTCGGGAGGAC...TATCTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp AGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SLVAVLRGKASRPSSRLCAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...ACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWRFLLC*AFSYAS
Trigger: ACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLTHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPTHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCTHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGGGATCAGAAATTTTTaGTCTCCCAGTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSGIRNF*SPSPQS
Trigger: GGACTGGGGACTGGGAGACCAAAAATTTCTGATCCC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLWGQD*SSGAKS
Trigger: GCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELWGQD*SSGAKS
Trigger: GCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAAATGAGGCCCCGCACTaGTTGCACTGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERENEAPH*LHWKGR
Trigger: ACGGCCCTTCCAGTGCAATCAGTGCGGGGCCTCATT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTAPRWC*PRGARP
Trigger: AGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNALGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACCACCCAGGGCAGTCTaGCAGACACGACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTPPRAV*QTRLSP
Trigger: TGGGGAAAGTCGTGTCTGTCAGACTGCCCTGGGTGG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGAGGCTCAGGCCATCTaGGCAGCCTCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSEAQAI*AASAKP
Trigger: TGGCTTTGCGGAGGCTGCTCAGATGGCCTGAGCCTC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAAAGGTAGTGAAATTGTaGGGGCCCTGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAKVVKL*GPWARP
Trigger: TGGCCGGGCCCAGGGCCCTCACAATTTCACTACCTT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAAAGGTAGTGAAATTGTaGGGGCCCTGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREKVVKL*GPWARP
Trigger: TGGCCGGGCCCAGGGCCCTCACAATTTCACTACCTT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAAGGTAGTGAAATTGTaGGGGCCCTGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTKVVKL*GPWARP
Trigger: TGGCCGGGCCCAGGGCCCTCACAATTTCACTACCTT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTGGGCCCGATGCAAATaGTCCCACAGATATCACACT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWWARCK*SHRYHT
Trigger: AGTGTGATATCTGTGGGATCATTTGCATCGGGCCCA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp GGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAGCGATGCACCAAACATATGCTCTGGCTaGCACCTTCCTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: GPAGTKQEQYVGSSSDAPNICSG*HLPQTS
Trigger: TGAAGTCTGAGGAAGGTGTCAGCCAGAGCATATGTT...TGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKATCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAYVVLN*CAGHIK
Trigger: CTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCTTTAATGACGGAGTaGGTCCTCAGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASLMTE*VLRWPV
Trigger: CACTGGCCACCTGAGGACGCACTCCGTCATTAAAGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: TVWLLFCGGRHQDQVAACPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...ACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGCAGGTTGCCCTTCTaGGTGAATGAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSRLPF*VNEAPH
Trigger: GTGCGGGGCCTCATTCACCCAGAAGGGCAACCTGCT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAAGCAGGTTGCCCTTCTaGGTGAATGAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERESRLPF*VNEAPH
Trigger: GTGCGGGGCCTCATTCACCCAGAAGGGCAACCTGCT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARSGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTPGPSG*SAGCPP
Trigger: CGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGCCCTGCTGTGTCTTaGCACTTGGGTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGPAVS*HLGGGT
Trigger: TGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAICSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCAGCACTGTTGTAGATaGGAGGTACGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPQHCCR*EVRCAE
Trigger: TTCAGCACAACGTACCTCCCATCTACAACAGTGCTG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCAGCACTGTTGTAGATaGGAGGTACGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSQHCCR*EVRCAE
Trigger: TTCAGCACAACGTACCTCCCATCTACAACAGTGCTG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSTHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVTHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGGGATCAGAAATTTTTaGTCTCCCAGTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFGIRNF*SPSPQS
Trigger: GGACTGGGGACTGGGAGACCAAAAATTTCTGATCCC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAACCTGGGAGGGATCTTaGTGCCTGGCTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERETWEGS*CLATGP
Trigger: AGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCTCATCAGCATCCATaGTCCTCAGGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPHQHP*SSGYQP
Trigger: TGGTTGATAACCTGAGGACCATGGATGCTGATGAGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGAATGAGGCCCCGCACTaGTTGCACTGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSNEAPH*LHWKGR
Trigger: ACGGCCCTTCCAGTGCAATCAGTGCGGGGCCTCATT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACCCCGGAATGCAGCTTaGTGTGCCGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKPRNAA*CAGAGC
Trigger: GCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTCCTCAGGTGGCCAGTaGGGGCGTCCCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFSSGGQ*GRPSGG
Trigger: GCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTACACATGTTCACAGTaGGTGCCATCGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSYTCSQ*VPSHQK
Trigger: CTTTTGGTGCGATGGCACTCACTGTGAACATGTGTA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCTTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPTTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRHSQND*SMLQWR
Trigger: TCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTGGGCCCGATGCAAATaGTCCCACAGATATCACACT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRWARCK*SHRYHT
Trigger: AGTGTGATATCTGTGGGATCATTTGCATCGGGCCCA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGGGCTCCCTCTGCCCTaGCAGGCTTGCCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFGLPLP*QACPPR
Trigger: GCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACGTTGGCTCCAGCAGCGATGCACCACAGAATAACGGCCTGGAGGCCTGCAATTGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: TLAPAAMHHRITAWRPAIGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...AATTGCAGGCCTCCAGGCCGTTATTCTGTGGTGCATCGCTGCTGGAGCCAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCAAACACAACGAGAGTaGATGGAATCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPQTQRE*MESRHT
Trigger: TGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCAAACACAACGAGAGTaGATGGAATCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSQTQRE*MESRHT
Trigger: TGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCGGGAAGAGAAGTaGAATGCAGGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALPREEK*NAGRQL
Trigger: CAGCTGCCTGCCTGCATTGCACTTCTCTTCCCGAGG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCAGGCCAAGTGAGAGCTaGCTTTTCCACACAAATCCA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVRPSES*LFHTNP
Trigger: TGGATTTGTGTGGAAAAGGCAGCTCTCACTTGGCCT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCCTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNACSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: REDSLLLRGSKPREAQAISSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGGGATCTTGGTGCCTaGCTACAGGGCCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRRDLGA*LQGLCV
Trigger: GACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCT...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CCA 90 bp AACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTCAGACCCAGCCACCTaGGAGGGATCTTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSLVAVLRGKASRPSSRLSDPAT*EGSWCL
Trigger: CAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGA...CAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CCA 90 bp GTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGAGTGTCCTGCTAACTTaGCCGCGGAGCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VAVLRGKASRPSSRLCEKSVLLT*PRSSSQ
Trigger: CTGGGAAGAGCTCCGCGGCCAAGTTAGCAGGACACT...CTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACCCCGGAATGCAGCTTaGTGTGCCGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIPRNAA*CAGAGC
Trigger: GCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCCCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSPRNF*GIELLR
Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCCCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSPRNF*GIELLR
Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACTAGGAAGCGACAGGTaGGGGAATCTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKLGSDR*GNLSQR
Trigger: CCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNALPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFTTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGTTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGAAGCTCGCCAAGGCCAAGTaGGAGCTGCCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: HKVVILAQNSLVAVLRGKLAKAK*ELPFPH
Trigger: GTGTGGAAAAGGCAGCTCTCACTTGGCCTTGGCGAG...CTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR GCA 90 bp GCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGATAAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: AVLRGKASRPSSRLCEKIRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...TATCTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERESLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp GGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGDIGPEQFGCCFAGEGISLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...GATGCCTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR GCA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGATCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAGGCCCCGCACTGATTaGACTGGAAGGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKRPRTD*TGRAVL
Trigger: GAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGTTTACCAACGGAGTaGGTCCTCAGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGLPTE*VLRWPV
Trigger: CACTGGCCACCTGAGGACGCACTCCGTTGGTAAACC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331340.8
ENST00000343574.9
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGCPEGP*FPSSCG
Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTCTCTGATCCTATCTTaGACAGGTCTTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSLILS*TGLLPF
Trigger: AAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCAAACACAACGAGAGTaGATGGAATCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPQTQRE*MESRHT
Trigger: TGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCAAACACAACGAGAGTaGATGGAATCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWQTQRE*MESRHT
Trigger: TGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCATTTACAATCCTGTaGATGTACTCGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFSFTIL*MYSPEG
Trigger: CCCTTCTGGCGAGTACATGCACAGGATTGTAAATGA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCATTTACAATCCTGTaGATGTACTCGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSFTIL*MYSPEG
Trigger: CCCTTCTGGCGAGTACATGCACAGGATTGTAAATGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPRMTEA*CSGELE
Trigger: TTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLRMTEA*CSGELE
Trigger: TTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGRMTEA*CSGELE
Trigger: TTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCT...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGRMTEA*CSGELE
Trigger: TTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAACGGCCTGGAGGCCTaGAATTTTCTCTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: QIREGPAGTKQEQYVGSSNGLEA*NFLFSV
Trigger: AACTGAGAAGAGAAAATTGCAGGCCTCCAGGCCGTT...GCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp GCAAAGGGGGCAATTCTTCATCATGACCACAAGGTGGTGATATTGGCCCAGAACTGGGAGGGATCTTGGTaGCTGGCTACAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AKGAILHHDHKVVILAQNWEGSW*LATGPL
Trigger: CAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCA...GTTCTGGGCCAATATCACCACCTTGTGGTCATGATGAAGAATTGCCCCCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR GCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGAGGCCAAGTGAGAGCTaGCTTTTCCACACAAATCCA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKARPSES*LFHTNP
Trigger: TGGATTTGTGTGGAAAAGGCAGCTCTCACTTGGCCT...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNALIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
CDS-3UTR CCA 90 bp GACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGCTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: DHKVVILAQNSLVAVLRGLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...CCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CCA 90 bp GTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGCTCATCGCCCTCATCTaGAGTATCGCTTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: VAVLRGKASRPSSRLCEKLIALI*SIAYRG
Trigger: CCCCCTGTAAGCGATACTCCAGATGAGGGCGATGAG...CTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTTCTTCTTTAATGACTaGGTACAGTGTGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSFFFND*VQCARK
Trigger: CTTCCGGGCACACTGTACCCAGTCATTAAAGAAGAA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGACCTAAAGCTGTACTaGATACAACAGATTCGACCT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLDLKLY*IQQIRP
Trigger: AGGTCGAATCTGTTGTATCCAGTACAGCTTTAGGTC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGACCTAAAGCTGTACTaGATACAACAGATTCGACCT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVDLKLY*IQQIRP
Trigger: AGGTCGAATCTGTTGTATCCAGTACAGCTTTAGGTC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGCACTGTTGTAGATaGGAGGTACGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRQHCCR*EVRCAE
Trigger: TTCAGCACAACGTACCTCCCATCTACAACAGTGCTG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCAGCACTGTTGTAGATaGGAGGTACGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAQHCCR*EVRCAE
Trigger: TTCAGCACAACGTACCTCCCATCTACAACAGTGCTG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATGACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGACCTGGGAGGGATCTTaGTGCCTGGCTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HDHKVVILAQNSLVAVLRTWEGS*CLATGP
Trigger: AGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGT...CCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp GTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: VAVLRGKASRPSSRLCEKGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...CTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAATATCCACATTTGTaGGGTTTACCAACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRQYPHL*GLPTEC
Trigger: GCACTCCGTTGGTAAACCTCACAAATGTGGATATTG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTCCCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRSPRNF*GIELLR
Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LVQSSLCCWREREGGSPCATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCGGCCACTCACAGAATaGCTGAAGCATGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSRPLTE*LKHAAV
Trigger: CACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCACACAAATCCAGACTTTaGGGACCTAGGGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: KVVILAQNSLVAVLRGKAHKSRL*GPRAAR
Trigger: CCGAGCAGCCCTAGGTCCTCAAAGTCTGGATTTGTG...TGCCTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LVAVLRGKASRPSSRLCEGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...CTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSLAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCTCTGATCCTATCTTaGACAGGTCTTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSLILS*TGLLPF
Trigger: AAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLYTFI*SPLVLT
Trigger: GGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGGTGCGCGAACCCCGTaGTTAGCACAGGGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIGARTP*LAQGRA
Trigger: TGCTCTACCCTGTGCTAAGCACGGGGTTCGCGCACC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNARGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGSSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAAACACAACGAGAGTaGATGGAATCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRQTQRE*MESRHT
Trigger: TGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAYVVLN*CAGHIK
Trigger: CTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATCTTTAATGACGGAGTaGGTCCTCAGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNASLMTE*VLRWPV
Trigger: CACTGGCCACCTGAGGACGCACTCCGTCATTAAAGA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp TTTGGTTTAACAGCTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGGTTACTCCACTGCCATaGTCCCAGGACACCGCACAA +
Preference number: 4 (lower is better)
Translates to: FGLTAQIREGPAGTKQEQVTPLP*SQDTAQ
Trigger: TTGTGCGGTGTCCTGGGAGCATGGCAGTGGAGTAAC...CTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAGCTGTTAAACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAGCAGGTTGCCCTTCTaGGTGAATGAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISRLPF*VNEAPH
Trigger: GTGCGGGGCCTCATTCACCCAGAAGGGCAACCTGCT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISPSRS*RCCRRA
Trigger: CGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIPRAPT*PWRAAA
Trigger: TGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERESASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKILCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGCTGACCGGGAATATTaGGAATATTCTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFADREY*EYSSSA
Trigger: AGCACTTGAAGAATATTCCCAATATTCCCGGTCAGC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCTGACCGGGAATATTaGGAATATTCTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGADREY*EYSSSA
Trigger: AGCACTTGAAGAATATTCCCAATATTCCCGGTCAGC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGCTGACCGGGAATATTaGGAATATTCTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVADREY*EYSSSA
Trigger: AGCACTTGAAGAATATTCCCAATATTCCCGGTCAGC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTATCTCGCGTTTGTTTTaGCAAGAAGAGGACACTACA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGISRLF*QEEDTT
Trigger: TGTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGAT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGATCTCGCGTTTGTTTTaGCAAGAAGAGGACACTACA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWISRLF*QEEDTT
Trigger: TGTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGAT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCATCTCGCGTTTGTTTTaGCAAGAAGAGGACACTACA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVISRLF*QEEDTT
Trigger: TGTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGAT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGACCTAAAGCTGTACTaGATACAACAGATTCGACCT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSDLKLY*IQQIRP
Trigger: AGGTCGAATCTGTTGTATCCAGTACAGCTTTAGGTC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGACCTAAAGCTGTACTaGATACAACAGATTCGACCT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVDLKLY*IQQIRP
Trigger: AGGTCGAATCTGTTGTATCCAGTACAGCTTTAGGTC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALRFLLC*AFSYAS
Trigger: ACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTRFLLC*AFSYAS
Trigger: ACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERERFLLC*AFSYAS
Trigger: ACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCACTTCAACATATGCTCTaGCTGACACCTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RSEKVLRAPSRNSTLAPALQHML*LTPSSD
Trigger: GTCTGAGGAAGGTGTCAGCCAGAGCATATGTTGAAG...TGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
3UTR CAA 72 bp GGCATTACTCTCCGAAGGTCTGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATATCCTACAGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GITLRRSGSVPQ*PCAFQYPTGAE
Trigger: CTCTGCACCTGTAGGATATTGGAATGCACAGGGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 72 bp GTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTaGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: VVILAQNSLVAV*RGKASRPSSRL
Trigger: CAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: DHKVVILAQNSLVAVLRGTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...CCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR TCA 90 bp GTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: VWLLFCGGRHQDQVAACVTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...CACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR TCA 90 bp ACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: TVWLLFCGGRHQDQVAACGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...ACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR TCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKLPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATACACATGTTCACAGTaGGTGCCATCGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARYTCSQ*VPSHQK
Trigger: CTTTTGGTGCGATGGCACTCACTGTGAACATGTGTA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALHSQND*SMLQWR
Trigger: TCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTCTCTGATCCTATCTTaGACAGGTCTTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRSLILS*TGLLPF
Trigger: AAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAATGAGACCGCTGCGCTaGTCCTCGTTGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTMRPLR*SSLLLS
Trigger: CGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCAT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAAAAGTGTGAAGTCATaGAAACTCCTACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLKSVKS*KLLLYQ
Trigger: CTGGTAAAGTAGGAGTTTGCATGACTTCACACTTTT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTAAAAGTGTGAAGTCATaGAAACTCCTACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLKSVKS*KLLLYQ
Trigger: CTGGTAAAGTAGGAGTTTGCATGACTTCACACTTTT...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTACGTTGTGCTGAACTaGTGCGCTGGCCACATCAAG +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDYVVLN*CAGHIK
Trigger: CTTGATGTGGCCAGCGCAGCAGTTCAGCACAACGTA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGTCCTCAGGTTATGTaGATTTGTGCGTCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREGPQVM*ICASRF
Trigger: AAAGCGCGACGCACAAATCCACATAACCTGAGGACC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGTCCTCAGGTTATGTaGATTTGTGCGTCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGPQVM*ICASRF
Trigger: AAAGCGCGACGCACAAATCCACATAACCTGAGGACC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISGLCS*YIGLMT
Trigger: GGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCCAGTCTATGCTGCTaGCGGGAGCGAGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSSLCC*REREGG
Trigger: GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKACSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGATGTCTGGAGAGTTTaGGTTGTCAATTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGDVWRV*VVNSGC
Trigger: GCACCCCGAATTGACAACCCAAACTCTCCAGACATC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCAAAGGAAGGATACACTaGCATCACGATTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVKGRIH*HHDLST
Trigger: TGTAGACAAATCGTGATGCCAGTGTATCCTTCCTTT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLTHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAGGGATCTTGGTGCCTaGCTACAGGGCCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIRDLGA*LQGLCV
Trigger: GACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCCCCGGAATGCAGCTTaGTGTGCCGGAGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHPRNAA*CAGAGC
Trigger: GCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATCCCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARSPRNF*GIELLR
Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGWSGR*DRCAAP
Trigger: AGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRGAPP*ATARCA
Trigger: CGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTTAAAGGTATGGGAGTaGAAAAGCGGGGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSLKVWE*KSGEQG
Trigger: GCCCTGTTCCCCGCTTTTTCACTCCCATACCTTTAA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTACACATGTTCACAGTaGGTGCCATCGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLYTCSQ*VPSHQK
Trigger: CTTTTGGTGCGATGGCACTCACTGTGAACATGTGTA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTGGGCCCGATGCAAATaGTCCCACAGATATCACACT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWWARCK*SHRYHT
Trigger: AGTGTGATATCTGTGGGATCATTTGCATCGGGCCCA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp TCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCAGCGATGCACCACATCAGTTCTTTGTTGGTaGCAGAAAATATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: SCGHQAGTVRWLQQRCTTSVLCW*QKIWPF
Trigger: AAATGGCCATATTTTCTGTCACCAACAAAGAACTGA...TGTGGTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAATGACCACAAGGTGGTaGTATTGGCCCAGAACAGTT +
Preference number: 4 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRMTTRW*YWPRTV
Trigger: AACTGTTCTGGGCCAATATCACCACCTTGTGGTCAT...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGGGCTCCCTCTGCCCTaGCAGGCTTGCCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKGLPLP*QACPPR
Trigger: GCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANSRGSL*PARLAR
Trigger: GCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTCPEGP*FPSSCG
Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000615491.4
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFSASGL*SWYIGL
Trigger: CAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGACAGGTTGTTGGCCCTaGTGTGTCTTGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPTGCWP*CVLALG
Trigger: CCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: SALDACSSKLAWAQVVGPVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWIFLCD*ILKECC
Trigger: ACAGCACTCCTTCAATATGCAATCACAGAGAAAGAT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVRVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGTCCTCAGGTTATGTaGATTTGTGCGTCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGPQVM*ICASRF
Trigger: AAAGCGCGACGCACAAATCCACATAACCTGAGGACC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCCTTGTGCTTTTCCTaGGGTGGCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSLCFS*GGSGSG
Trigger: CCCAGACCCCGAGCCACCCCAGGAAAAGCACAAGGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACTGGAAAAAGACACCTaGTGCGCGAACCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLEKDT*CANPVL
Trigger: AAGCACGGGGTTCGCGCACCAGGTGTCTTTTTCCAG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: APQICPREDSLLLRGSKPSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGCTGAACTGCTGCGCTaGCCACATCAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIAELLR*PHQDTT
Trigger: TGTGGTGTCTTGATGTGGCCAGCGCAGCAGTTCAGC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGGGATCAGAAATTTTTaGTCTCCCAGTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDGIRNF*SPSPQS
Trigger: GGACTGGGGACTGGGAGACCAAAAATTTCTGATCCC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCACATCCATCAGAAATaGGATCAGAAATTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLHIHQK*DQKFLV
Trigger: GACCAAAAATTTCTGATCCCATTTCTGATGGATGTG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CAA 72 bp GGGGCAATTCTTCATCATGACCACAAGGTGGTGATATaGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GAILHHDHKVVI*AQNSLVAVLRG
Trigger: CCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTCATGATGAAGAATTGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGGGGCTTTCCTTCCCTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIGAFLP*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR TCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCAATATCCACATTTGTaGGGTTTACCAACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGQYPHL*GLPTEC
Trigger: GCACTCCGTTGGTAAACCTCACAAATGTGGATATTG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331340.8
ENST00000343574.9
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTCCCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALSPRNF*GIELLR
Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGTTCTCCCCCAGGAGTaGTTTCTCCTCGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFVLPQE*FLLAGD
Trigger: GTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAAC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTACACATGTTCACAGTaGGTGCCATCGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWYTCSQ*VPSHQK
Trigger: CTTTTGGTGCGATGGCACTCACTGTGAACATGTGTA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNATTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTTTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAGGCCCCGCACTGATTaGACTGGAAGGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHRPRTD*TGRAVL
Trigger: GAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARLAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKGWSAG*PPRAAC
Trigger: ACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAGCCCGTTGCGCGCGTaGGGGGCGATGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCSPLRA*GAMWLV
Trigger: GACCAACCACATCGCCCCGCACGCGCGCAACGGGCT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCCCCTCGCGTTATGTaGGACGAGAACTCGTACCGG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSPRVM*DENSYR
Trigger: CCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAAGGGCTCCCCAGATATaGCCACGGGAAGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTRAPQI*PREDSL
Trigger: GAGACTGTCTTCCCGTGGGCATATCTGGGGAGCCCT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCTCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVSSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWRVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAAAAGTGTGAAGTCATaGAAACTCCTACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRKSVKS*KLLLYQ
Trigger: CTGGTAAAGTAGGAGTTTGCATGACTTCACACTTTT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCATTTACAATCCTGTaGATGTACTCGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSFTIL*MYSPEG
Trigger: CCCTTCTGGCGAGTACATGCACAGGATTGTAAATGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGTTGTGCTGAACTGCTaGGCTGGCCACATCAAGACA +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPVVLNC*AGHIKT
Trigger: TGTCTTGATGTGGCCAGCGCAGCAGTTCAGCACAAC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAMTEAC*SGELEM
Trigger: CATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGRMTEA*CSGELE
Trigger: TTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCCTCGGGAAGAGAAGTaGAATGCAGGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMPREEK*NAGRQL
Trigger: CAGCTGCCTGCCTGCATTGCACTTCTCTTCCCGAGG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCAAGGCCAAGTGAGAGCTaGCTTTTCCACACAAATCCA +
Preference number: 4 (lower is better)
Translates to: KVVILAQNSLVAVLRGKARPSES*LFHTNP
Trigger: TGGATTTGTGTGGAAAAGGCAGCTCTCACTTGGCCT...TGCCTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CCA 90 bp GCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGATACCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: AVLRGKASRPSSRLCEKIPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...TATCTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCSTALS*AEWLER
Trigger: GCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHVSVES*QLLLGD
Trigger: GTCCCCGAGCAACAGCTGCCAAGACTCCACGGACAC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCTGTGTCTTGGCACTTaGGTGGCGGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHLCLGT*VAAHLS
Trigger: GGACAGGTGTGCCGCCACCCAAGTGCCAAGACACAG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGCTGACCGGGAATATTaGGAATATTCTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVADREY*EYSSSA
Trigger: AGCACTTGAAGAATATTCCCAATATTCCCGGTCAGC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QHCLVQSSLCCWREREGGLEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFLEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTCCTCATCAGCATCCATaGTCCTCAGGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: TVWLLFCGGRHQDQVAACPHQHP*SSGYQP
Trigger: TGGTTGATAACCTGAGGACCATGGATGCTGATGAGG...ACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKITWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCAATATCCACATTTGTaGGGTTTACCAACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWQYPHL*GLPTEC
Trigger: GCACTCCGTTGGTAAACCTCACAAATGTGGATATTG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331340.8
ENST00000343574.9
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACGGCCACTCACAGAATaGCTGAAGCATGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTRPLTE*LKHAAV
Trigger: CACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATGGGCCCGATGCAAATaGTCCCACAGATATCACACT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTWARCK*SHRYHT
Trigger: AGTGTGATATCTGTGGGATCATTTGCATCGGGCCCA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR TCA 90 bp AGCTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCTTACATGATAGGAGATaGAGGCATGCTTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSDQRRSCGHQAGTVRWLLHDRR*RHAFVF
Trigger: GAAAACAAAAGCATGCCTTCATCTCCTATCATGTAA...GAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp ACGTTGGCTCCAGCAGCGATGCACCACAGAATAACGGCCTGGAGGCCTGCAATTAGCCAATCTAGTTTGTaGGCAAAAAGATGTACTTTG +
Preference number: 4 (lower is better)
Translates to: TLAPAAMHHRITAWRPAISQSSL*AKRCTL
Trigger: CAAAGTACATCTTTTTGCTCACAAACTAGATTGGCT...AATTGCAGGCCTCCAGGCCGTTATTCTGTGGTGCATCGCTGCTGGAGCCAACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSMTEAC*SGELEM
Trigger: CATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDMTEAC*SGELEM
Trigger: CATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCCTCGGGAAGAGAAGTaGAATGCAGGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFPREEK*NAGRQL
Trigger: CAGCTGCCTGCCTGCATTGCACTTCTCTTCCCGAGG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGGTCCTCAGGTTATGTaGATTTGTGCGTCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPGPQVM*ICASRF
Trigger: AAAGCGCGACGCACAAATCCACATAACCTGAGGACC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGGTCCTCAGGTTATGTaGATTTGTGCGTCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTGPQVM*ICASRF
Trigger: AAAGCGCGACGCACAAATCCACATAACCTGAGGACC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp AGTATTAGAGGATTTACTAATACAGGTCCTAAGGGGATTATCAACTTGTATGGCGCTGTCCTCCCGAGGTaGTGGAGAGGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SIRGFTNTGPKGIINLYGAVLPR*WRGPRG
Trigger: TCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGC...GCCATACAAGTTGATAATCCCCTTAGGACCTGTATTAGTAAATCCTCTAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKICALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGCTGACCGGGAATATTaGGAATATTCTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLADREY*EYSSSA
Trigger: AGCACTTGAAGAATATTCCCAATATTCCCGGTCAGC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAGGCTTTCCACATCCTaGGAAGCTGGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHRLSTS*EAGVSG
Trigger: CCCTGACACCCCAGCTTCCCAGGATGTGGAAAGCCT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCATCTCGCGTTTGTTTTaGCAAGAAGAGGACACTACA +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLISRLF*QEEDTT
Trigger: TGTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGAT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAACCCACCCTCAAGACTaGGACTTAGAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKITHPQD*DLEFPR
Trigger: ACGTGGGAATTCTAAGTCCCAGTCTTGAGGGTGGGT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHKAELP*SLWEPF
Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CCA 90 bp CAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTACGTTGGCTCCAGCATTCACATCTGTTTTTaGTTTAACAGCTCAGATCAG +
Preference number: 4 (lower is better)
Translates to: QIREGPAGTKQEQYVGSSIHICF*FNSSDQ
Trigger: CTGATCTGAGCTGTTAAACCAAAAACAGATGTGAAT...GCTGGAGCCAACGTACTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATATGGGGCAAGGAGCTaGGATCCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTYGARS*DPGFPH
Trigger: ATGTGGAAAGCCTGGATCTCAGCTCCTTGCCCCATA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATACACATGTTCACAGTaGGTGCCATCGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIYTCSQ*VPSHQK
Trigger: CTTTTGGTGCGATGGCACTCACTGTGAACATGTGTA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGTTATGTGGATTTGTaGGTCGCGCTTTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGYVDL*VALWGQ
Trigger: TTGGCCCCAAAGCGCGACGCACAAATCCACATAACC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFSLLEL*CPPEVV
Trigger: CACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFCPEGP*FPSSCG
Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWISRSWR*CRRACR
Trigger: CCGACACGCCCTACGACAGCAGCGCCAGCTACGAGA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAACCTGCAGTGCCATTTaGCTCCTCTTTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTTCSAI*LLFPRG
Trigger: TCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACGTTGGCTCCAGCAGCGATGCACCACAGAATAACGGCCTGGAGGCCTGCAATTAGATTTGGGAATTATTaGATGGAAATCCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: TLAPAAMHHRITAWRPAIRFGNY*MEIPKV
Trigger: GACTTTAGGGATTTCCATGCAATAATTCCCAAATCT...AATTGCAGGCCTCCAGGCCGTTATTCTGTGGTGCATCGCTGCTGGAGCCAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp AGTATTAGAGGATTTACTAATACAGGTCCTAAGGGGATTATCAACTTGTATGGCCCTCGGGGATCGGCATaGGCTCATCGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SIRGFTNTGPKGIINLYGPRGSA*AHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGG...GCCATACAAGTTGATAATCCCCTTAGGACCTGTATTAGTAAATCCTCTAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATTCTTCTTTAATGACTaGGTACAGTGTGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKFFFND*VQCARK
Trigger: CTTCCGGGCACACTGTACCCAGTCATTAAAGAAGAA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAAAAGGAAGGATACACTaGCATCACGATTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTKGRIH*HHDLST
Trigger: TGTAGACAAATCGTGATGCCAGTGTATCCTTCCTTT...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACAGCACTGTTGTAGATaGGAGGTACGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTQHCCR*EVRCAE
Trigger: TTCAGCACAACGTACCTCCCATCTACAACAGTGCTG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGTGAGGTTTACCAACTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTVRFTN*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGTTGGTAAACCTCAC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWISCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACAATTTCCTCTCTGTTaGTTCATTTCACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKQFPLC*FISPWD
Trigger: GTCCCAAGGTGAAATGAAGCAACAGAGAGGAAATTG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAIFLCD*ILKECC
Trigger: ACAGCACTCCTTCAATATGCAATCACAGAGAAAGAT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGAAAAGTGTGAAGTCATaGAAACTCCTACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGKSVKS*KLLLYQ
Trigger: CTGGTAAAGTAGGAGTTTGCATGACTTCACACTTTT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAAAAAGTGTGAAGTCATaGAAACTCCTACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWREREKSVKS*KLLLYQ
Trigger: CTGGTAAAGTAGGAGTTTGCATGACTTCACACTTTT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCAAACACAACGAGAGTaGATGGAATCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPQTQRE*MESRHT
Trigger: TGTGTGCCTAGATTCCATGCACTCTCGTTGTGTTTG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCATTTACAATCCTGTaGATGTACTCGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSFTIL*MYSPEG
Trigger: CCCTTCTGGCGAGTACATGCACAGGATTGTAAATGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATCATTTACAATCCTGTaGATGTACTCGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKISFTIL*MYSPEG
Trigger: CCCTTCTGGCGAGTACATGCACAGGATTGTAAATGA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPMTEAC*SGELEM
Trigger: CATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCCGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANPTKPS*LGPCGS
Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCGG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
CDS-3UTR GCA 90 bp TTAACACATCTTCACATGCAGCGATTCTTACAGACTGAAGGCTTCACTGAAGGGAGGACACCGCACAACTaGCTAGACCTTCGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LTHLHMQRFLQTEGFTEGRTPHN*LDLRFA
Trigger: TGCAAAACGAAGGTCTAGGCAGTTGTGCGGTGTCCT...CCCTTCAGTGAAGCCTTCAGTCTGTAAGAATCGCTGCATGTGAAGATGTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATTCTTCTTTAATGACTaGGTACAGTGTGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIFFFND*VQCARK
Trigger: CTTCCGGGCACACTGTACCCAGTCATTAAAGAAGAA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTGTGCTCTCTGCTTCTaGGGACTGGAAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMCALCF*GLEKDT
Trigger: GGTGTCTTTTTCCAGTCCCCAGAAGCAGAGAGCACA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: SGETSRKVAVLDAPNAALSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERERNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCTTCATTGCCTAGGTaGTTGAGAGTAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSSLPR*LRVMTL
Trigger: TAAGGTCATTACTCTCAACCACCTAGGCAATGAAGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACAAAGGAAGGATACACTaGCATCACGATTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDKGRIH*HHDLST
Trigger: TGTAGACAAATCGTGATGCCAGTGTATCCTTCCTTT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAGATTCCTGCTCTGCTaGGCCTTCTCTTACGCCAGT +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHRFLLC*AFSYAS
Trigger: ACTGGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGGATCAGAAATTTTTaGTCTCCCAGTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGIRNF*SPSPQS
Trigger: GGACTGGGGACTGGGAGACCAAAAATTTCTGATCCC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGGGATCAGAAATTTTTaGTCTCCCAGTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMGIRNF*SPSPQS
Trigger: GGACTGGGGACTGGGAGACCAAAAATTTCTGATCCC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCACATCCATCAGAAATaGGATCAGAAATTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGHIHQK*DQKFLV
Trigger: GACCAAAAATTTCTGATCCCATTTCTGATGGATGTG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GAAATTAATACTCCAGAACCACAGATGAAGAGCATATCTCCTTCTCCTGTCCCAACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: EINTPEPQMKSISPSPVPTWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...TGGGACAGGAGAAGGAGATATGCTCTTCATCTGTGGTTCTGGAGTATTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGGAGGTACGTTGTGCTaGACTGCTGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANGGTLC*TAALAT
Trigger: TGTGGCCAGCGCAGCAGTTCAGCACAACGTACCTCC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCACTCACAGAATGACTaGAGCATGCTGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHHSQND*SMLQWR
Trigger: TCTCCACTGCAGCATGCTTCAGTCATTCTGTGAGTG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKILAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGCTGCTCCTCGTTGTTaGTCTCGGTGTCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIAAPRC*SRCPWS
Trigger: ACTCCACGGACACCGAGAGCAACAACGAGGAGCAGC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAGGCGGCAGTCCTTGTaGTTTTCCTGGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANRRQSL*FSWGGS
Trigger: CGAGCCACCCCAGGAAAAGCACAAGGACTGCCGCCT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCAGTCCAGTCTATGCTaGTGGCGGGAGCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKQSSLC*WREREG
Trigger: GCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGTCCAGTCCAGTCTATaGTGCTGGCGGGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIVQSSL*CWRERE
Trigger: TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGAC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTCCTGTCTGCTCACCTaGAGACCCACACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSCLLT*RPTQQG
Trigger: CCCCTGCTGTGTGGGTCTGCAGGTGAGCAGACAGGA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACACACCTGTCCTGTCTaGTCACCTGCAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIHTCPV*SPADPH
Trigger: GTGTGGGTCTGCAGGTGAGCAGACAGGACAGGTGTG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGATTTTCTCTCACAAGTaGAGCCTCTCCGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMIFSHK*SLSALD
Trigger: ATCTAGGGCGGAGAGGCTGCACTTGTGAGAGAAAAT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGGCGGGGTTCTCACCTaGAGTGCCATTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKGGVLT*SAICLL
Trigger: GAGGAGGCAAATGGCACTGCAGGTGAGAACCCCGCC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: QRSGETSRKVAVLDAPNARVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACAAAAGTGTGAAGTCATaGAAACTCCTACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDKSVKS*KLLLYQ
Trigger: CTGGTAAAGTAGGAGTTTGCATGACTTCACACTTTT...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGGCAGATTCCTGCTCTaGTGGGCCTTCTCTTACGCC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCGRFLL*WAFSYA
Trigger: GGCGTAAGAGAAGGCCCAGCAGAGCAGGAATCTGCC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGATTTGGGAATTATTaGATGGAAATCCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRRFGNY*MEIPKV
Trigger: GACTTTAGGGATTTCCATGCAATAATTCCCAAATCT...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR GCA 90 bp ATGCAGCGATTCTTACAGACTGAAGGCTTCACTGAAGGGTCTGCTTCAACATATCTGTCCAGCAGCATCTaGGAAGTAACAATCCCATCA +
Preference number: 4 (lower is better)
Translates to: MQRFLQTEGFTEGSASTYLSSSI*EVTIPS
Trigger: TGATGGGATTGTTACTTCGCAGATGCTGCTGGACAG...ATATGTTGAAGCAGACCCTTCAGTGAAGCCTTCAGTCTGTAAGAATCGCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCCSRCP*SLGSCC
Trigger: GCAACAGCTGCCAAGACTCCACGGACACCGAGAGCA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGTCTTGGCACTTGGGTaGCGGCACACCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKVLALG*RHTCPV
Trigger: GACAGGACAGGTGTGCCGCCACCCAAGTGCCAAGAC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGAGCTCGAAGCTGGCCTaGGCACAGGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSSKLA*AQVVGP
Trigger: AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATATGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKICSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: QRECMESRHTVVHSGTQDSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERESMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAATCTCGCGTTTGTTTTaGCAAGAAGAGGACACTACA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTISRLF*QEEDTT
Trigger: TGTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGAT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAACATGTGTTCCCAAGTaGTATTGCAGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTTCVPK*YCSCPE
Trigger: CTCAGGACAGCTGCAATACCACTTGGGAACACATGT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCCCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSPRNF*GIELLR
Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGGGAAGGAAGAGATTTaGAATAAAGCTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKGKEEI*NKALVS
Trigger: AGAAACCAAAGCTTTATTTCAAATCTCTTCCTTCCC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGACAACAGATTCGACCTaGACAATCACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMTTDST*TITTHN
Trigger: GTTGTGTGTGGTGATTGTTCAGGTCGAATCTGTTGT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGTATTGCAGCTGTCCTaGGGCCCATCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCVLQLS*GPSLLP
Trigger: AGGGAGAAGAGATGGGCCTCAGGACAGCTGCAATAC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCGGCCACTCACAGAATaGCTGAAGCATGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRPLTE*LKHAAV
Trigger: CACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGAGACTGATCCTCGGGTaGGAAGAGCAACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKRLILG*EEQPRS
Trigger: GCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCTCATGTGGAAGCGGTaGTCCCCTCGCGTTATGTGC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANLMWKR*SPRVMC
Trigger: GCACATAACGCGAGGGGAGCACCGCTTCCACATGAG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATTCTGGATGCTCCCAATaGAGCCCTGCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHSGCSQ*SPASKN
Trigger: ATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGA...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGAAAAAGACACCTGGTaGGCGAACCCCGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCEKDTW*ANPVLS
Trigger: GCTAAGCACGGGGTTCGCGCACCAGGTGTCTTTTTC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAATGACTGAAGCATGCTaGAGTGGAGAACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTMTEAC*SGELEM
Trigger: CATTTCCAGTTCTCCACTGCAGCATGCTTCAGTCAT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CTGAAGGGTCTGCTTCAACATATGCTCTGGCTGACACCTTCCTCAGACTTCACAGTTGATGAAGGAACATaGACGTACGATATTTACATG +
Preference number: 4 (lower is better)
Translates to: LKGLLQHMLWLTPSSDFTVDEGT*TYDIYM
Trigger: CATGTAAATATCGTACGTGCATGTTCCTTCATCAAC...TGTGAAGTCTGAGGAAGGTGTCAGCCAGAGCATATGTTGAAGCAGACCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGCTTGGTCCATCACGTaGGACTTCATCATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFAWSIT*DFIISF
Trigger: GAACGAAATGATGAAGTCCCACGTGATGGACCAAGC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCAPTWP*RAAAGS
Trigger: AGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCTGGGCACAGGTTGTTaGCCCTGCTGTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKLGTGC*PCCVLA
Trigger: TGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAAAGGAAGGATACACTaGCATCACGATTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTKGRIH*HHDLST
Trigger: TGTAGACAAATCGTGATGCCAGTGTATCCTTCCTTT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANKAELP*SLWEPF
Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
CDS-3UTR CCA 90 bp TTTGGTTTAACAGCTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: FGLTAQIREGPAGTKQEQLGIIA*KSLKSS
Trigger: TGATGACTTTAGGGATTTCCATGCAATAATTCCCAA...CTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAGCTGTTAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp AGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: SLVAVLRGKASRPSSRLCLGIIA*KSLKSS
Trigger: TGATGACTTTAGGGATTTCCATGCAATAATTCCCAA...ACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp ACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TVWLLFCGGRHQDQVAACLGIIA*KSLKSS
Trigger: TGATGACTTTAGGGATTTCCATGCAATAATTCCCAA...ACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCCTCATCAGCATCCATaGTCCTCAGGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHPHQHP*SSGYQP
Trigger: TGGTTGATAACCTGAGGACCATGGATGCTGATGAGG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439701.2
3UTR CAA 72 bp ATTGATAGCATTAATCTTGAAGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACACACCTTCCTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: IDSINLEGDPCL*GLESPHTFLGL
Trigger: AAGCCCGAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
3UTR CAA 72 bp ATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCACACACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: MIDSINLEGDPC*LGLESPHTFLG
Trigger: CCCGAGGAAGGTGTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCCTCCGCAAAGCCAGTaGATCCAGGACGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKPPQSQ*IQDDPK
Trigger: TTTGGGATCGTCCTGGATTCACTGGCTTTGCGGAGG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGCGCATCTTTCTCTGTaGTTGCATATTGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFAHLSL*LHIEGV
Trigger: CACTCCTTCAATATGCAATCACAGAGAAAGATGCGC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCTCCCTTCAACCAACTaGCTCAGGGGGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANLPSTN*LRGMDG
Trigger: TCCATCCATCCCCCTGAGTCAGTTGGTTGAAGGGAG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCGGCCACTCACAGAATaGCTGAAGCATGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKRPLTE*LKHAAV
Trigger: CACTGCAGCATGCTTCAGTCATTCTGTGAGTGGCCG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCTCTGATCCTATCTTaGACAGGTCTTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSLILS*TGLLPF
Trigger: AAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATCTCTGATCCTATCTTaGACAGGTCTTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTSLILS*TGLLPF
Trigger: AAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAGGGGCTGTGCTCTCTaGTTCTGGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIRGCAL*FWGLEK
Trigger: TTTTTCCAGTCCCCAGAAGCAGAGAGCACAGCCCCT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTTCCTCGGGCTTCAGTaGCTCCATGTCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKFLGLQ*LHVIAR
Trigger: CCGTGCTATGACATGGAGGCACTGAAGCCCGAGGAA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTIFLCD*ILKECC
Trigger: ACAGCACTCCTTCAATATGCAATCACAGAGAAAGAT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATAGAATGACTGAAGCATaGTGCAGTGGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHRMTEA*CSGELE
Trigger: TTCCAGTTCTCCACTGCAGCATGCTTCAGTCATTCT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAAAAGGTTCCTCTGCTaGCTTCACACTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCKRFLC*LHTPPG
Trigger: CCCTGGTGGAGTGTGAAGGCAGCAGAGGAACCTTTT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439701.2
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCATGTAGCTCGAAGCTaGCCTGGGCACAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANHVARS*PGHRLL
Trigger: CAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTACTCTCCGAAGGTCTaGCTCAGTCCCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCYSPKV*LSPSIA
Trigger: GGCAATTGAGGGACTGAGCCAGACCTTCGGAGAGTA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKSQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGCTGACCGGGAATATTaGGAATATTCTTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMADREY*EYSSSA
Trigger: AGCACTTGAAGAATATTCCCAATATTCCCGGTCAGC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGAAATGGAACATGCTaGTATGTGAAGCAATTGGTG +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGNGTC*YVKQLV
Trigger: CACCAATTGCTTCACATACCAGCATGTTCCATTTCC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAACTTGGGACATGTCTTaGCCCTCATCAGCATCCATG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWITWDMS*PSSASM
Trigger: CATGGATGCTGATGAGGGTCAAGACATGTCCCAAGT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCACGAGAGATCTCTCTaGTCCTATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCHERSL*SYLAQV
Trigger: GACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTTGACAGAAAAGGTGTaGCACATCCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFLTEKV*HIHQKW
Trigger: CCATTTCTGATGGATGTGTCACACCTTTTCTGTCAA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTGGGCCCGATGCAAATaGTCCCACAGATATCACACT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCWARCK*SHRYHT
Trigger: AGTGTGATATCTGTGGGATCATTTGCATCGGGCCCA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTCTCTGATCCTATCTTaGACAGGTCTTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFSLILS*TGLLPF
Trigger: AAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTGCATATTGAAGGAGTaGTGTCTAAAGCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFCILKE*CLKPLI
Trigger: GATCAAGGGCTTTAGACAGCACTCCTTCAATATGCA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGTTCCCAAGTGGTATTaGAGCTGTCCTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANVPKWY*SCPEAH
Trigger: ATGGGCCTCAGGACAGCTGCAATACCACTTGGGAAC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp GGGGCAATTCTTCATCATGACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGAGATTTGGGAATTATTaGATGGAAATCCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: GAILHHDHKVVILAQNSLRFGNY*MEIPKV
Trigger: GACTTTAGGGATTTCCATGCAATAATTCCCAAATCT...CAAACTGTTCTGGGCCAATATCACCACCTTGTGGTCATGATGAAGAATTGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR GCA 90 bp ACTAATACAGGTCCTAAGGGGATTATCAACTTGTATGGCTTTAAATATTCAGCTTTACTGTTACTCCACTaGCATGCTCCCAGGACACCG +
Preference number: 4 (lower is better)
Translates to: TNTGPKGIINLYGFKYSALLLLH*HAPRTP
Trigger: CGGTGTCCTGGGAGCATGGCAGTGGAGTAACAGTAA...AGCTGAATATTTAAAGCCATACAAGTTGATAATCCCCTTAGGACCTGTATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTCCAAAAGGTTCCTCTaGTGCCTTCACACTCCACCA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCSKRFL*CLHTPP
Trigger: TGGTGGAGTGTGAAGGCAGCAGAGGAACCTTTTGGA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439701.2
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTCTGCTTCTGGGGACTaGAAAAAGACACCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSASGD*KKTPGA
Trigger: CGCACCAGGTGTCTTTTTCCAGTCCCCAGAAGCAGA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTGTAGTGACAGATTTTaGGGGCCATTAAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFCSDRF*GPLKVW
Trigger: CCATACCTTTAATGGCCCCCAAAATCTGTCACTACA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGCCTCTGGTACTAGATaGAACCAGCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANASGTR*NQPGKE
Trigger: TTCCTTCCCTGGCTGGTTCCATCTAGTACCAGAGGC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGACATGTTTGAAAGCTTaGTTTCAAACAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMTCLKA*FQTGEL
Trigger: GAGCTCACCTGTTTGAAACCAAGCTTTCAAACATGT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGAAAGGAAGGATACACTaGCATCACGATTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMKGRIH*HHDLST
Trigger: TGTAGACAAATCGTGATGCCAGTGTATCCTTCCTTT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGACCTAAAGCTGTACTaGATACAACAGATTCGACCT +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFDLKLY*IQQIRP
Trigger: AGGTCGAATCTGTTGTATCCAGTACAGCTTTAGGTC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTCTCTTACGCCAGTGTaGACTTCACGGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSLTPV*TSRDRA
Trigger: TGCCCTATCCCGTGAAGTCCACACTGGCGTAAGAGA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
3UTR CAA 72 bp TGTGGACTTCACGGGATAGGGCAGACAGAGTATTCGTaGCATTTATTTGTTCTATCACTACAGAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CGLHGIGQTEYS*HLFVLSLQKKH
Trigger: ATGCTTCTTCTGTAGTGATAGAACAAATAAATGCAACGAATACTCTGTCTGCCCTATCCCGTGAAGTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGAGCTTCAACATGTTTaGAAGCTTGGTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFELQHV*KLGFKQ
Trigger: CTGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTGCCACACCCTTCTGTaGGCAGAGAAATCCATGACT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKCHTLL*AEKSMT
Trigger: AGTCATGGATTTCTCTGCTCACAGAAGGGTGTGGCA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATACACATGTTCACAGTaGGTGCCATCGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIYTCSQ*VPSHQK
Trigger: CTTTTGGTGCGATGGCACTCACTGTGAACATGTGTA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AGTATTAGAGGATTTACTAATACAGGTCCTAAGGGGATTATCAACTTGTATGGCCCATCAGTGCTACTGTaGCTCCAACCCTTACTGTTA +
Preference number: 4 (lower is better)
Translates to: SIRGFTNTGPKGIINLYGPSVLL*LQPLLL
Trigger: TAACAGTAAGGGTTGGAGTCACAGTAGCACTGATGG...GCCATACAAGTTGATAATCCCCTTAGGACCTGTATTAGTAAATCCTCTAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGGTAGCCGCACATGTTaGACTCAAAAGGATCACGGA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKGSRTC*TQKDHG
Trigger: TCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCCAATATCCTACAGGTaGAGAGCCAGCCATCCTATG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKPISYR*RASHPM
Trigger: CATAGGATGGCTGGCTCTGCACCTGTAGGATATTGG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCCCTCAATTGCCCTGTaGATTCCAATATCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCPSIAL*IPISYR
Trigger: CCTGTAGGATATTGGAATGCACAGGGCAATTGAGGG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGCTCAGTCCCTCAATTaGCCTGTGCATTCCAATATC +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIAQSLN*PVHSNI
Trigger: GATATTGGAATGCACAGGGCAATTGAGGGACTGAGC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACTAATTATCCTACAATaGACAGGAGAGCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWILIILQ*TGELPP
Trigger: AGGCGGGAGCTCTCCTGTGCATTGTAGGATAATTAG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMIFLCD*ILKECC
Trigger: ACAGCACTCCTTCAATATGCAATCACAGAGAAAGAT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AGTATTAGAGGATTTACTAATACAGGTCCTAAGGGGATTATCAACTTGTATGGCCCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SIRGFTNTGPKGIINLYGPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...GCCATACAAGTTGATAATCCCCTTAGGACCTGTATTAGTAAATCCTCTAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGGGATCAGAAATTTTTaGTCTCCCAGTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKGIRNF*SPSPQS
Trigger: GGACTGGGGACTGGGAGACCAAAAATTTCTGATCCC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCACATCCATCAGAAATaGGATCAGAAATTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMHIHQK*DQKFLV
Trigger: GACCAAAAATTTCTGATCCCATTTCTGATGGATGTG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCCCAGTCCCCAGTCCTaGTTTTTAATTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCPSPQS*FLIPNF
Trigger: GAAATTGGGAATTAAAAATCAGGACTGGGGACTGGG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCAATATCCACATTTGTaGGGTTTACCAACTGAAACT +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHQYPHL*GLPTET
Trigger: AGTTTCAGTTGGTAAACCTCACAAATGTGGATATTG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615491.4
CDS-3UTR GCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHIFLCD*ILKECC
Trigger: ACAGCACTCCTTCAATATGCAATCACAGAGAAAGAT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMRVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCATGTTCACAGTGAGTaGCATCGCACCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCHVHSE*HRTKSI
Trigger: AATGCTTTTGGTGCGATGGCACTCACTGTGAACATG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCCTCATCAGCATCCATaGTCCTCAGGTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKPHQHP*SSGYVD
Trigger: ATCCACATAACCTGAGGACCATGGATGCTGATGAGG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTGCTTCATTTCACCTTaGGACAGTGTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCCFISP*DSVGED
Trigger: GTCTTCACCAACACTGTCCCAAGGTGAAATGAAGCA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGGTTTAGAATTCATTTaGGTCAGTGGTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCGLEFI*VSGSPP
Trigger: TGGGGGAGAACCACTGACCCAAATGAATTCTAAACC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATCCATGACTCAAGAATaGTATCTTTGTAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTSMTQE*YLCKLH
Trigger: ATGGAGTTTACAAAGATACCATTCTTGAGTCATGGA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: MYVWTHMLACLYSKELQHLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCAGCACTGTTGTAGATaGGAGGTACGTTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKQHCCR*EVRCAE
Trigger: TTCAGCACAACGTACCTCCCATCTACAACAGTGCTG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGAAACTTACCAACACTaGGAAATTCAGGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANETYQH*EIQACG
Trigger: GCCACAAGCCTGAATTTCTCAGTGTTGGTAAGTTTC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCTTGCACAGGTCTTCTaGCATTTCACTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCLAQVF*HFTVIS
Trigger: ACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATCTTCCTTCACTCAGTaGATTGGTGCAGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWISSFTQ*IGAAIL
Trigger: CAAAATTGCTGCACCAATGCACTGAGTGAAGGAAGA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTCATTTACAATCCTGTaGATGTACTCGCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSFTIL*MYSPEG
Trigger: CCCTTCTGGCGAGTACATGCACAGGATTGTAAATGA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTTCTTCTTTAATGACTaGGTACAGTGTGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKFFFND*VQCARK
Trigger: CTTCCGGGCACACTGTACCCAGTCATTAAAGAAGAA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCTCCTTCCCAGGCTGTaGCGTGTTTTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKLLPRL*RVLSIS
Trigger: AGAAATAGATAAAACACGCCACAGCCTGGGAAGGAG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGACTGACTCAGGGGGATaGATGGAAAAGAACAGAGTA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKTDSGG*MEKNRV
Trigger: TACTCTGTTCTTTTCCATCCATCCCCCTGAGTCAGT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCATCTCGCGTTTGTTTTaGCAAGAAGAGGACACTACA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCISRLF*QEEDTT
Trigger: TGTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGAT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGCTGCAGTGGAGAACTaGAAATGTATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANAAVEN*KCISCC
Trigger: GCAACAAGAGATACATTTCCAGTTCTCCACTGCAGC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATATAATGACTCCACATaGACACAAGTCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIYNDST*TQVSLD
Trigger: ATCAAGGCTGACTTGTGTTCATGTGGAGTCATTATA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATCTTGAAGGAGACCCTTaGTTGTTGGGATTAGAATCT +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANLEGDP*LLGLES
Trigger: AGATTCTAATCCCAACAAGCAAGGGTCTCCTTCAAG...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAAACACAACATTGTCTaGTCCAGTCCAGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANKHNIV*SSPVYA
Trigger: AGCATAGACTGGACTGGACCAGACAATGTTGTGTTT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAAAGGAAGGATACACTaGCATCACGATTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIKGRIH*HHDLST
Trigger: TGTAGACAAATCGTGATGCCAGTGTATCCTTCCTTT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGACCTAAAGCTGTACTaGATACAACAGATTCGACCT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKDLKLY*IQQIRP
Trigger: AGGTCGAATCTGTTGTATCCAGTACAGCTTTAGGTC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGCAACTTTTGGTACATaGTATGGCCACCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKATFGT*YGHLLN
Trigger: GTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGGGCAGACTGGAAATATaGCTGCATTTCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKGRLEI*LHFSFT
Trigger: TGTAAATGAGAAATGCAGTCATATTTCCAGTCTGCC...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGTTTCTGAGGAATGTTaGCGTTTGAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCVSEEC*RLRDSK
Trigger: TTTTGAATCTCTCAAACGGCAACATTCCTCAGAAAC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCATCTTTCTCTGTGATTaGATATTGAAGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCIFLCD*ILKECC
Trigger: ACAGCACTCCTTCAATATGCAATCACAGAGAAAGAT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACACATCCATCAGAAATaGGATCAGAAATTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIHIHQK*DQKFLV
Trigger: GACCAAAAATTTCTGATCCCATTTCTGATGGATGTG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCACATCCATCAGAAATaGGATCAGAAATTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCHIHQK*DQKFLV
Trigger: GACCAAAAATTTCTGATCCCATTTCTGATGGATGTG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATACAGGTCCTAAGGGGATTATCAACTTGTATGGCTTTAAATATTCAGCTCTCTGTAACTTCTATAGGCTaGAAAAGTAGCCAATCTAGT +
Preference number: 4 (lower is better)
Translates to: IQVLRGLSTCMALNIQLSVTSIG*KSSQSS
Trigger: ACTAGATTGGCTACTTTTCCAGCCTATAGAAGTTAC...AGAGAGCTGAATATTTAAAGCCATACAAGTTGATAATCCCCTTAGGACCTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR TCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGAGGAATGTTGCCGTTTaGGAGATTCAAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKRNVAV*EIQKER
Trigger: TCTTTCTTTTTGAATCTCTCAAACGGCAACATTCCT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR TCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTTCTTCTTTAATGACTaGAACTTGGGACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANFFFND*NLGHVL
Trigger: CAAGACATGTCCCAAGTTTCAGTCATTAAAGAAGAA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440768.6
CDS-3UTR GCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWIRVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTCCAAATTTCGGGACTaGTGTTTAAATTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKSKFRD*CLNCSD
Trigger: GTCACTACAATTTAAACACCAGTCCCGAAATTTGGA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAGAAATTCAGGCTTGTaGCTACAAACAGATGTACAT +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANRNSGL*LQTDVH
Trigger: ATGTACATCTGTTTGTAGCCACAAGCCTGAATTTCT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATCCCAGACATTTGATTaGTTTAGAATTCATTTGGGT +
Preference number: 4 (lower is better)
Translates to: LQQTDSKKALTLEILTWISQTFD*FRIHLG
Trigger: ACCCAAATGAATTCTAAACCAATCAAATGTCTGGGA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCTTCACTCAGTGCATTaGTGCAGCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKLHSVH*CSNFVY
Trigger: ATAAACAAAATTGCTGCACCAATGCACTGAGTGAAG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR GCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGAGAGTAGGTGAAATTTaGAACAAACTGACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKRVGEI*NKLTLR
Trigger: TCTTAGAGTCAGTTTGTTGCAAATTTCACCTACTCT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ISGSSFSRKILRFYYVANLEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CCA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTTAGAGATATTAACTTaGATAAGGCGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKLEILT*IRRIFL
Trigger: GAGAAAGATGCGCCTTATCCAAGTTAATATCTCTAA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS CCA 90 bp TGCCAGGCTTGCCCGCCTCGCCGCGGCCGAGCGTCCCGCCCAGGCTaGGATGCGCCGCGCGGGGACCCAGGGGGCTTGCCGCAGTCACCG +
Preference number: 5 (lower is better)
Translates to: CQACPPRRGRASRPG*DAPRGDPGGLPQSP
Trigger: CGGTGACTGCGGCAAGCCCCCTGGGTCCCCGCGCGGCGCATCCCAGCCTGGGCGGGACGCTCGGCCGCGGCGAGGCGGGCAAGCCTGGCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000413698.5
ENST00000646110.1
CDS GCA 90 bp CTGATCCTCGGGTGCGAAGAGCAACCTCGGAGCCGGGGCTCCCTCTaGCCTGCCAGGCTTGCCCGCCTCGCCGCGGCCGAGCGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: LILGCEEQPRSRGSL*PARLARLAAAERPA
Trigger: GGCGGGACGCTCGGCCGCGGCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCTCCGAGGTTGCTCTTCGCACCCGAGGATCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000440768.6
ENST00000612658.4
ENST00000615491.4
ENST00000646110.1
CDS TCA 90 bp TCTCGGAGGCGGCGCGCAGCAGGTCGTAGGCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCGCGTGCGGGGCGATGTGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SRRRRAAGRRRGAPP*ATARCARAGRCGWS
Trigger: TGACCAACCACATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGCCTACGACCTGCTGCGCGCCGCCTCCGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 90 bp GAGTGGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCAGCTaGTACATCGGGCTGATGACCGGGACCACCTCGGAACCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: EWLERGVPSASGLCS*YIGLMTGTTSEPPG
Trigger: CCCGGGCGGTTCCGAGGTGGTCCCGGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS GCA 90 bp TGGGCCGAGTGGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTGATGACCGGGACCACCTCGGAACCG +
Preference number: 5 (lower is better)
Translates to: WAEWLERGVPSASGL*SWYIGLMTGTTSEP
Trigger: CGGTTCCGAGGTGGTCCCGGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS GCA 90 bp GCATCCATGGTCCTCAGGTTATCTCTCGGCCGCCTCCCGGATCGCTaGTCCGGTACAGGGAGCGGGGCGCGCAGAAGGGCGCAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: ASMVLRLSLGRLPDR*SGTGSGARRRAQSG
Trigger: CCCGCTCTGCGCCCTTCTGCGCGCCCCGCTCCCTGTACCGGAGCAGCGATCCGGGAGGCGGCCGAGAGATAACCTGAGGACCATGGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000642219.1
CDS CCA 90 bp TTGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTaGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LESSSRFSTALSWAE*LERGVPSASGLCSW
Trigger: CCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAISWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS CCA 90 bp AGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCAGCTGGTACA +
Preference number: 5 (lower is better)
Translates to: RAAAGSPRRCPGPSG*SAGCPPRAACAAGT
Trigger: TGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CCA 90 bp AACTTGGCCTTGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: NLALESSSRFSTALS*AEWLERGVPSASGL
Trigger: CAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 90 bp GGCAGCTGTTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAACTTaGCCTTGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSCCSGTPRAPRAPT*PWRAAAGSPRRCPG
Trigger: CCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 90 bp TTGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTaGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LESSSRFSTALSWAE*LERGVPSASGLCSL
Trigger: CAAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612658.4
CDS CCA 90 bp TGTTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGT +
Preference number: 5 (lower is better)
Translates to: CCSGTPRAPRAPTWP*RAAAGSPRRCPGPS
Trigger: ACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 90 bp CCGCTGCGCTGCTCCTCGTTGTTGCTCTCGGTGTCCGTGGAGTCTTaGCAGCTGTTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAAC +
Preference number: 5 (lower is better)
Translates to: PLRCSSLLLSVSVES*QLLLGDASRSEGTN
Trigger: GTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTCCACGGACACCGAGAGCAACAACGAGGAGCAGCGCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS TCA 90 bp GGCAGTGTTCGCACTTGTACACCTTCATCTGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCTGCGAGTTCTCGGAGGCGGCGCGCA +
Preference number: 5 (lower is better)
Translates to: GSVRTCTPSSAPRWC*PRGARPASSRRRRA
Trigger: TGCGCGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAAGTGCGAACACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp ACAGCCCGTTGCGCGCGTGCGGGGCGATGTGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCTCGTTGTTGCTCTCGGTGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: TARCARAGRCGWSGR*DRCAAPRCCSRCPW
Trigger: CCACGGACACCGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACCACATCGCCCCGCACGCGCGCAACGGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKASWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAISEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp GGGCGGTCATGGTCAAGGTGCCTGGGCTTCCCCCGGCTTTTGGCTTaGGAGGGTGGCATGAGGAGGCAGGTACTGGGTGGAGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GRSWSRCLGFPRLLA*EGGMRRQVLGGASA
Trigger: AGCACTGGCTCCACCCAGTACCTGCCTCCTCATGCCACCCTCTCAAGCCAAAAGCCGGGGGAAGCCCAGGCACCTTGACCATGACCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471793.1
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCACCTGGGAGGGATCTaGGTGCCTGGCTACAGGGCC +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCHLGGI*VPGYRA
Trigger: GGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCACCTGGGAGGGATCTaGGTGCCTGGCTACAGGGCC +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLHLGGI*VPGYRA
Trigger: GGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS GCA 90 bp TCGGACAGGCCCTTGTCCCCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCATG +
Preference number: 5 (lower is better)
Translates to: SDRPLSPTTLSLLEL*CPPEVVERSSGIGM
Trigger: CATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGGGACAAGGGCCTGTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426121.1
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp CAAGGTGCCTGGGCTTCCCCCGGCTTTTGGCTTGAGAGGGTGGCATaGGGAGGCAGGTACTGGGTGGAGCCAGTGCTTCTCTGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: QGAWASPGFWLERVA*GGRYWVEPVLLCWD
Trigger: ATCCCAGCAGAGAAGCACTGGCTCCACCCAGTACCTGCCTCCTCATGCCACCCTCTCAAGCCAAAAGCCGGGGGAAGCCCAGGCACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471793.1
CDS GCA 90 bp CACTGGAAGGGCCGTTCTCCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCATG +
Preference number: 5 (lower is better)
Translates to: HWKGRSPTTLSLLEL*CPPEVVERSSGIGM
Trigger: CATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGAGAACGGCCCTTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343574.9
ENST00000438033.5
ENST00000645066.1
CDS GCA 90 bp CCGCTGGTGACCCACTTACCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCATG +
Preference number: 5 (lower is better)
Translates to: PLVTHLPTTLSLLEL*CPPEVVERSSGIGM
Trigger: CATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGTAAGTGGGTCACCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CCA 90 bp CCACGACTCTGTCACTCTTGGAGCTTTGCTGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCGGCATGGGCTCATCGCCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: PRLCHSWSFAVLPRW*RGPRGSAWAHRPHL
Trigger: CAGATGAGGGCGATGAGCCCATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000426121.1
ENST00000438033.5
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
ENST00000484847.6
ENST00000492782.6
ENST00000612658.4
ENST00000641948.1
ENST00000642219.1
ENST00000645066.1
ENST00000646110.1
CDS CCA 90 bp GGCTGCTCGGAGTTCCCCTCAGACCCAGCCACCTGGGAGGGATCTTaGTGCCTGGCTACAGGGCCTCTGTGTCCTCTTCCTCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GCSEFPSDPATWEGS*CLATGPLCPLPPPK
Trigger: TTTTGGAGGAGGAAGAGGACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGAGGGGAACTCCGAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCCCCGGAATGCAGCTaGATGTGCCGGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSPECS*MCRSRL
Trigger: CAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGATTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAIPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPQSRAA*VPVGAI
Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCQSRAA*VPVGAI
Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGTGTCGGACAGGCCCTaGTCCCCTGAAACTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCVSDRP*SPETWD
Trigger: GTCCCAAGTTTCAGGGGACAAGGGCCTGTCCGACAC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346667.8
CDS TCA 90 bp TCCTCAGGTTATGTGGATTTGTGCGTCGCGCTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGCAACCTCGGAGCCGGGGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SSGYVDLCVALWGQD*SSGAKSNLGAGAPS
Trigger: AGAGGGAGCCCCGGCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAATCCACATAACCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000440768.6
ENST00000612658.4
ENST00000615491.4
ENST00000646110.1
CDS GCA 90 bp TCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: SRGTSSFRSPSRSWR*CRRACRTGPCPRSA
Trigger: CGCACTCCGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357364.8
CDS GCA 90 bp TGCTCGGAGTTCCCCTCAGACCCAGCCACCTGGGAGGGATCTTGGTaGCTGGCTACAGGGCCTCTGTGTCCTCTTCCTCCTCCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: CSEFPSDPATWEGSW*LATGPLCPLPPPKG
Trigger: ACCTTTTGGAGGAGGAAGAGGACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGAGGGGAACTCCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS GCA 90 bp CTCCTCAACTTGGACATTTTGCGGGGTGTGTGGCTCTCACGGCCATaGTGGCCTGTGAGTGTCCATCCTCCCACACACCAGAGGACCCCC +
Preference number: 5 (lower is better)
Translates to: LLNLDILRGVWLSRP*WPVSVHPPTHQRTP
Trigger: GGGGGTCCTCTGGTGTGTGGGAGGATGGACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CCA 90 bp GGTCCATCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: GPSRGTSSFRSPSRS*RCCRRACRTGPCPR
Trigger: CCGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGATGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357364.8
CDS CCA 90 bp CGGAGTTCCCCTCAGACCCAGCCACCTGGGAGGGATCTTGGTGCCTaGCTACAGGGCCTCTGTGTCCTCTTCCTCCTCCAAAAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RSSPQTQPPGRDLGA*LQGLCVLFLLQKVP
Trigger: AGGAACCTTTTGGAGGAGGAAGAGGACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGAGGGGAACTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS CCA 90 bp ATGGTCAAGGTGCCTGGGCTTCCCCCGGCTTTTGGCTTGAGAGGGTaGCATGAGGAGGCAGGTACTGGGTGGAGCCAGTGCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: MVKVPGLPPAFGLRG*HEEAGTGWSQCFSA
Trigger: AGCAGAGAAGCACTGGCTCCACCCAGTACCTGCCTCCTCATGCCACCCTCTCAAGCCAAAAGCCGGGGGAAGCCCAGGCACCTTGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471793.1
CDS-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTTTGTGCGTCGCGCTTaGGGGCCAAGACTGATCCTC +
Preference number: 5 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVFVRRA*GPRLIL
Trigger: GAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCCCGGAATGCAGCTaGATGTGCCGGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFSPECS*MCRSRL
Trigger: CAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGA...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTCCCCGGAATGCAGCTaGATGTGCCGGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGSPECS*MCRSRL
Trigger: CAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCCCCGGAATGCAGCTaGATGTGCCGGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSPECS*MCRSRL
Trigger: CAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKARCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWQSRAA*VPVGAI
Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS GCA 90 bp TCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SRGTSSFRSPSRSWR*CRRACRTGPCPQCG
Trigger: GCCACACTGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349824.8
CDS GCA 90 bp TCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCCACGACTC +
Preference number: 5 (lower is better)
Translates to: SRGTSSFRSPSRSWR*CRRACRTGPCPPRL
Trigger: GAGTCGTGGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426121.1
CDS CCA 90 bp GGTCCATCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: GPSRGTSSFRSPSRS*RCCRRACRTGPCPQ
Trigger: CTGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349824.8
CDS CCA 90 bp GGTCCATCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GPSRGTSSFRSPSRS*RCCRRACRTGPCPL
Trigger: CAGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346667.8
CDS CCA 90 bp GGTCCATCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: GPSRGTSSFRSPSRS*RCCRRACRTGPCPP
Trigger: TGGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGATGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426121.1
CDS CCA 90 bp CCCTGGGCAGGATTGCTCCTCAACTTGGACATTTTGCGGGGTGTGTaGCTCTCACGGCCATGCTGGCCTGTGAGTGTCCATCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: PWAGLLLNLDILRGV*LSRPCWPVSVHPPT
Trigger: TGTGGGAGGATGGACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGAGTCTTGGCAGCTGTaGCTCGGGGACGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGESWQL*LGDASR
Trigger: GCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAIGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAICCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAIEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS CCA 90 bp GGTCCATCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GPSRGTSSFRSPSRS*RCCRRACRTGPCPQ
Trigger: TTGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGATGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTTGGCGACGTTACTaGCTAGTCTGTCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLVWRRY*LVCPAR
Trigger: TCGTGCTGGACAGACTAGCAAGTAACGTCGCCAAAC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: QRECMESRHTVVHSGTQDPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGCACCTGGGAGGGATCTaGGTGCCTGGCTACAGGGCC +
Preference number: 5 (lower is better)
Translates to: VWLLFCGGRHQDQVAACVHLGGI*VPGYRA
Trigger: GGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTG...CACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS GCA 90 bp TCATCAGCCCCATATGTAACCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCATG +
Preference number: 5 (lower is better)
Translates to: SSAPYVTTTLSLLEL*CPPEVVERSSGIGM
Trigger: CATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGTTACATATGGGGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413698.5
ENST00000492782.6
ENST00000612658.4
ENST00000642219.1
ENST00000646110.1
CDS CCA 90 bp CAGATGGGCAATGCGGGCGCTCCTGTCTTTGTCCCTCAATCTTTCTaGGCCCTTGCCTCAGCCTTCACCAGCACTCTTACACGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: QMGNAGAPVFVPQSF*ALASAFTSTLTRGE
Trigger: TTCTCCCCGTGTAAGAGTGCTGGTGAAGGCTGAGGCAAGGGCCCAGAAAGATTGAGGGACAAAGACAGGAGCGCCCGCATTGCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGTTTGGCGACGTTACTaGCTAGTCTGTCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGVWRRY*LVCPAR
Trigger: TCGTGCTGGACAGACTAGCAAGTAACGTCGCCAAAC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGTTTGGCGACGTTACTaGCTAGTCTGTCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWVWRRY*LVCPAR
Trigger: TCGTGCTGGACAGACTAGCAAGTAACGTCGCCAAAC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGTTTGGCGACGTTACTaGCTAGTCTGTCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLVWRRY*LVCPAR
Trigger: TCGTGCTGGACAGACTAGCAAGTAACGTCGCCAAAC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAATCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWRERESEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWRERERCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWRERELRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKARQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAINPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTGGGATCAGAAATTTTaGGTCTCCCAGTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPWDQKF*VSQSPV
Trigger: GACTGGGGACTGGGAGACCAAAAATTTCTGATCCCA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGGGATCAGAAATTTTaGGTCTCCCAGTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLWDQKF*VSQSPV
Trigger: GACTGGGGACTGGGAGACCAAAAATTTCTGATCCCA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS GCA 90 bp TCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: SRGTSSFRSPSRSWR*CRRACRTGPCPLKL
Trigger: AAGTTTCAGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346667.8
CDS-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATCCCCGGAATGCAGCTaGATGTGCCGGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNASPECS*MCRSRL
Trigger: CAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCCCCGGAATGCAGCTaGATGTGCCGGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSPECS*MCRSRL
Trigger: CAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCTCTCTGATCCTATCTaGCACAGGTCTTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLLSDPI*HRSSAI
Trigger: AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 5 (lower is better)
Translates to: QRECMESRHTVVHSGTQDAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAATGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAISLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCCAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCCAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTGGGATCAGAAATTTTaGGTCTCCCAGTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWWDQKF*VSQSPV
Trigger: GACTGGGGACTGGGAGACCAAAAATTTCTGATCCCA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGTGTCGGACAGGCCCTaGTCCCCAGTGTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWREREVSDRP*SPVWLL
Trigger: AAGAAGCCACACTGGGGACAAGGGCCTGTCCGACAC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349824.8
CDS-3UTR CAA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAGAGTGTCCTGCTAACTaGGCCGCGGAGCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRECPAN*AAELFP
Trigger: TGGGAAGAGCTCCGCGGCCAAGTTAGCAGGACACTC...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS GCA 90 bp TCACGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCCCAAGAAATT +
Preference number: 5 (lower is better)
Translates to: SRGTSSFRSPSRSWR*CRRACRTGPCPQEI
Trigger: AATTTCTTGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS GCA 90 bp TCTACTTTAACATTACTGGCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCATG +
Preference number: 5 (lower is better)
Translates to: STLTLLATTLSLLEL*CPPEVVERSSGIGM
Trigger: CATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGCCAGTAATGTTAAAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
CDS GCA 90 bp TACAGGGCCTCTGTGTCCTCTTCCTCCTCCAAAAGGTTCCTCTGCTaGCTTCACACTCCACCAGGGTGCAGAGAAAGGTGGAACCACTTG +
Preference number: 5 (lower is better)
Translates to: YRASVSSSSSKRFLC*LHTPPGCRERWNHL
Trigger: CAAGTGGTTCCACCTTTCTCTGCACCCTGGTGGAGTGTGAAGGCAGCAGAGGAACCTTTTGGAGGAGGAAGAGGACACAGAGGCCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439701.2
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCTCTCTGATCCTATCTaGCACAGGTCTTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGLSDPI*HRSSAI
Trigger: AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCTCTCTGATCCTATCTaGCACAGGTCTTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFLSDPI*HRSSAI
Trigger: AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFSWAEW*ERGVPS
Trigger: GGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QRECMESRHTVVHSGTQDGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAIEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGGTATGTGAAGCAATaGGTGCTAGGACTTTACCCT +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLWYVKQ*VLGLYP
Trigger: AGGGTAAAGTCCTAGCACCAATTGCTTCACATACCA...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCGGGAGGCTCAGGCCATCGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: REDSLLLRGSKPREAQAIVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...GATGGCCTGAGCCTCCCGAGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGCCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGGGGCCGCGCAGTCACTaGTTAGAGTGTCCTGCTAAC +
Preference number: 5 (lower is better)
Translates to: VAVLRGKASRPSSRLCEKGPRSH*LECPAN
Trigger: GTTAGCAGGACACTCTAACAAGTGACTGCGCGGCCC...CTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS GCA 90 bp TCAGGTTATCAACCAACCGAGGCCTCGCCAAGGCCAAGTGAGAGCTaGCTTTTCCACACAAATCCAGACTTTGAGGACCTAGGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SGYQPTEASPRPSES*LFHTNPDFEDLGLL
Trigger: GAGCAGCCCTAGGTCCTCAAAGTCTGGATTTGTGTGGAAAAGGCAGCTCTCACTTGGCCTTGGCGAGGCCTCGGTTGGTTGATAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438033.5
ENST00000439701.2
ENST00000462201.1
ENST00000492782.6
CDS GCA 90 bp ACCTCCATCAATAATGAATACACCTCCAGCCTGGCAGATGGGCAATaGGGGCGCTCCTGTCTTTGTCCCTCAATCTTTCTGGGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: TSINNEYTSSLADGQ*GRSCLCPSIFLGPC
Trigger: GCAAGGGCCCAGAAAGATTGAGGGACAAAGACAGGAGCGCCCGCATTGCCCATCTGCCAGGCTGGAGGTGTATTCATTATTGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGTTTGTGCGTCGCGCTTaGGGGCCAAGACTGATCCTC +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSFVRRA*GPRLIL
Trigger: GAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAA...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCATCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNASGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: VAVLRGKASRPSSRLCEKSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...CTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp GTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VWLLFCGGRHQDQVAACVTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...CACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCTCTCTGATCCTATCTaGCACAGGTCTTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKALSDPI*HRSSAI
Trigger: AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: QHCLVQSSLCCWREREGGIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...GCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGCTGTGTCTTGGCACTaGGGTGGCGGCACACCTGTC +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPAVSWH*GGGTPV
Trigger: GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 5 (lower is better)
Translates to: VWSSPVYAAGGSEKAAVLLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...AAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAACCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWREREPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTGGTATGTGAAGCAATaGGTGCTAGGACTTTACCCT +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVWYVKQ*VLGLYP
Trigger: AGGGTAAAGTCCTAGCACCAATTGCTTCACATACCA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGCCCAGAACAGTTTGGTaGCTGTTTTGCGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: DHKVVILAQNSLVAVLRGPRTVW*LFCGGR
Trigger: CCTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGG...CCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS CCA 90 bp GCAGCAACTGCACTACCTCCATCAATAATGAATACACCTCCAGCCTaGCAGATGGGCAATGCGGGCGCTCCTGTCTTTGTCCCTCAATCT +
Preference number: 5 (lower is better)
Translates to: AATALPPSIMNTPPA*QMGNAGAPVFVPQS
Trigger: AGATTGAGGGACAAAGACAGGAGCGCCCGCATTGCCCATCTGCCAGGCTGGAGGTGTATTCATTATTGATGGAGGTAGTGCAGTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS-3UTR CAA 90 bp AGTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLVAVLRGKASRPSSRLCTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...ACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGTTTGGCGACGTTACTaGCTAGTCTGTCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGVWRRY*LVCPAR
Trigger: TCGTGCTGGACAGACTAGCAAGTAACGTCGCCAAAC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGGTGGCGGCACACCTGTCGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: AQVVGPAVSWHLGGGTPVEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...GACAGGTGTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LVQSSLCCWREREGGSPCLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...ACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCCTCGCAGGGGACAGTaGGTGATGTCTGGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWPRRGQ*VMSGEF
Trigger: AAACTCTCCAGACATCACCAACTGTCCCCTGCGAGG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: HCLVQSSLCCWREREGGSLCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...ACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGLCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: PVQSMLLAGARRRQSLCFLCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...AAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: IVWSSPVYAAGGSEKAAVKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...GACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGTGGTATGTGAAGCAATaGGTGCTAGGACTTTACCCT +
Preference number: 5 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRWYVKQ*VLGLYP
Trigger: AGGGTAAAGTCCTAGCACCAATTGCTTCACATACCA...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIQSRAA*VPVGAI
Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGTGTCGGACAGGCCCTaGTCCCCGGAGTGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHVSDRP*SPECVL
Trigger: GAGGACGCACTCCGGGGACAAGGGCCTGTCCGACAC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357364.8
CDS-3UTR CAA 90 bp CTGAAGGGTCTGCTTCAACATATGCTCTGGCTGACACCTTCCTCAGACTTCACAAGCAGGAACAGTACGTaGGCTCCAGCAGCGATGCAC +
Preference number: 5 (lower is better)
Translates to: LKGLLQHMLWLTPSSDFTSRNST*APAAMH
Trigger: GTGCATCGCTGCTGGAGCCAACGTACTGTTCCTGCT...TGTGAAGTCTGAGGAAGGTGTCAGCCAGAGCATATGTTGAAGCAGACCCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS TCA 90 bp CTGTCCAGCAGCATCTGCGAAGTAACAATCCCATCAGTGCTACTGTaGCTCCAACCCTTACTGTTACTCCACTGCCATGCTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LSSSICEVTIPSVLL*LQPLLLLHCHAPRT
Trigger: TGTCCTGGGAGCATGGCAGTGGAGTAACAGTAAGGGTTGGAGTCACAGTAGCACTGATGGGATTGTTACTTCGCAGATGCTGCTGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS GCA 90 bp ATCAGTGCTACTGTGACTCCAACCCTTACTGTTACTCCACTGCCATaGTCCCAGGACACCGCACAACTGCCTAGACCTTCGTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: ISATVTPTLTVTPLP*SQDTAQLPRPSFCT
Trigger: AGTGCAAAACGAAGGTCTAGGCAGTTGTGCGGTGTCCTGGGAGCATGGCAGTGGAGTAACAGTAAGGGTTGGAGTCACAGTAGCACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTTTGTGCGTCGCGCTTaGGGGCCAAGACTGATCCTC +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPFVRRA*GPRLIL
Trigger: GAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGTTTGGCGACGTTACTaGCTAGTCTGTCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSVWRRY*LVCPAR
Trigger: TCGTGCTGGACAGACTAGCAAGTAACGTCGCCAAAC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: LSGPVQSMLLAGARRRQSRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...GGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: SGPVQSMLLAGARRRQSLRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...CAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWREREGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGAREGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: QSMLLAGARRRQSLCFSWLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...CCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKALCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GCTCCCCAGATATGCCCACGGGAAGACAGTCTCCTCCTACGGGGCAGCAAGCCTCTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: APQICPREDSLLLRGSKPLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...AGGCTTGCTGCCCCGTAGGAGGAGACTGTCTTCCCGTGGGCATATCTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCCAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTGGGATCAGAAATTTTaGGTCTCCCAGTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLWDQKF*VSQSPV
Trigger: GACTGGGGACTGGGAGACCAAAAATTTCTGATCCCA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGTTTGGTTGCTGTTTaGCGGGGGAAGGCATCAAGA +
Preference number: 5 (lower is better)
Translates to: WLLFCGGRHQDQVAACVRSLVAV*RGKASR
Trigger: TCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACT...TCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: VWLLFCGGRHQDQVAACVNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...CACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKITTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACACTCTCTGATCCTATCTaGCACAGGTCTTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTLSDPI*HRSSAI
Trigger: AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAG...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFSEGTN*ALESSS
Trigger: GCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCTGCGCTGCTCCTCGTaGTTGCTCTCGGTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFLRCSS*LLSVSV
Trigger: CACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCCTGGGCACAGGTTGTaGGCCCTGCTGTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFPGHRL*ALLCLG
Trigger: GCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATGGCCTGGGCACAGGTaGTTGGCCCTGCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTWPGHR*LALLCL
Trigger: AAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTGCTGTGTCTTGGCACTTGAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: SSKLAWAQVVGPAVSWHLRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...CAAGTGCCAAGACACAGCAGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWREREEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: HNIVWSSPVYAAGGSEKAGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...CGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTATGCTGCTGGCGGGAGCGAGAAGGCGGCAGTCCTTGTGCTTTTCCTGGGGTCTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: SMLLAGARRRQSLCFSWGLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...ACCCCAGGAAAAGCACAAGGACTGCCGCCTTCTCGCTCCCGCCAGCAGCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCCGCCCTAGATGCATGTAGCTCGAAGCTGGCCTGGGCACAGGTTGTTGGCCCTCTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: SALDACSSKLAWAQVVGPLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...AGGGCCAACAACCTGTGCCCAGGCCAGCTTCGAGCTACATGCATCTAGGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: QRECMESRHTVVHSGTQDEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: QRECMESRHTVVHSGTQDLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTQSRAA*VPVGAI
Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
CDS-3UTR CAA 90 bp GACCACAAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGAGACCAAGTAGCCGCTaGTGTGAGAAGATAGTCACA +
Preference number: 5 (lower is better)
Translates to: DHKVVILAQNSLVAVLRGRPSSR*CEKIVT
Trigger: TGTGACTATCTTCTCACACAAGCGGCTACTTGGTCT...CCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTTGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CAA 90 bp GTTTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGACCAAGTAGCCGCTaGTGTGAGAAGATAGTCACA +
Preference number: 5 (lower is better)
Translates to: VWLLFCGGRHQDQVAACVRPSSR*CEKIVT
Trigger: TGTGACTATCTTCTCACACAAGCGGCTACTTGGTCT...CACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp TTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTTGTGTGAGAAGAAGTTTGGTTGCTGTTTaGCGGGGGAAGGCATCAAGA +
Preference number: 5 (lower is better)
Translates to: LLFCGGRHQDQVAACVRRSLVAV*RGKASR
Trigger: TCTTGATGCCTTCCCCCGCAAAACAGCAACCAAACT...TCTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp TTTGGTTTAACAGCTCAGATCAGAGAAGGTCCTGCGGGCACCAAGCAGGAACAGAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: FGLTAQIREGPAGTKQEQNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...CTGTTCCTGCTTGGTGCCCGCAGGACCTTCTCTGATCTGAGCTGTTAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CAA 90 bp AAGGTGGTGATATTGGCCCAGAACAGTTTGGTTGCTGTTTTGCGGGGGAAGGCAAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: KVVILAQNSLVAVLRGKANLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...TGCCTTCCCCCGCAAAACAGCAACCAAACTGTTCTGGGCCAATATCACCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492782.6
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGG +
Preference number: 5 (lower is better)
Translates to: LQQTDSKKALTLEILTWIPSASG*CSWYIG
Trigger: CCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTTGAGCGACAGCCCGTaGCGCGCGTGCGGGGCGATG +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKLSDSP*RACGAM
Trigger: CATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGCGCGGTGCTCCTCCTaGAGCGACAGCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: ISGSSFSRKILRFYYVANARCSS*SDSPLR
Trigger: GCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGCGGAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: TTLSGPVQSMLLAGARRRRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...CCGCCTTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTCTCCTCGCAGGGGACAGTTGGTGATGTCTGGAGAGTTTGGGTTGTCAATTCGCACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: FSSQGTVGDVWRVWVVNSHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...CGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCCCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATTTTGTGCGTCGCGCTTaGGGGCCAAGACTGATCCTC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHFVRRA*GPRLIL
Trigger: GAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAA...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGCAGCGATTCTTACAGACTGAAGGCTTCACTGAAGGGTCTGCTTCAACATATACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: MQRFLQTEGFTEGSASTYTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...ATATGTTGAAGCAGACCCTTCAGTGAAGCCTTCAGTCTGTAAGAATCGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCGGCAGTGTTCGCACTaGTACACCTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMRQCSH*YTFICS
Trigger: GGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTGGCCCTGCTGTGTCTaGGCACTTGGGTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCWPCCV*ALGWRH
Trigger: GTGCCGCCACCCAAGTGCCAAGACACAGCAGGGCCA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGGCTCAGTCCCTCAATaGCCCTGTGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPGSVPQ*PCAFQY
Trigger: ATATTGGAATGCACAGGGCAATTGAGGGACTGAGCC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACATCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTTGGAGAAGGGGATTCTAGGAAGCGACAGGTGAGGGAATCTCAGCCAGCGGTCGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: FGEGDSRKRQVRESQPAVGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...GACCGCTGGCTGAGATTCCCTCACCTGTCGCTTCCTAGAATCCCCTTCTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAGAACACAAGTCAGCCTaGATACTGCTGACCGGGAAT +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIEHKSA*ILLTGN
Trigger: ATTCCCGGTCAGCAGTATCAAGGCTGACTTGTGTTC...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCACCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCCTTCACTCAGTGCATaGGTGCAGCAATTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLPSLSA*VQQFCL
Trigger: TAAACAAAATTGCTGCACCAATGCACTGAGTGAAGG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLLCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAACCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACATGGGATCAGAAATTTTaGGTCTCCCAGTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTWDQKF*VSQSPV
Trigger: GACTGGGGACTGGGAGACCAAAAATTTCTGATCCCA...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACTCTCTGATCCTATCTaGCACAGGTCTTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTLSDPI*HRSSAI
Trigger: AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCGCTGCTCCTCGTTGTaGCTCTCGGTGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCRCSSL*LSVSVE
Trigger: CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACCTGCAGTGCCATTTGCCTCCTCTTTCCTAGGGGATCTGGTGGCATTACTCTCGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TCSAICLLFPRGSGGITLEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...GAGAGTAATGCCACCAGATCCCCTAGGAAAGAGGAGGCAAATGGCACTGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNAEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACACCTTGGGACAGTGTaGGTGAAGACAAGTACTGTA +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTHLGTV*VKTSTV
Trigger: TACAGTACTTGTCTTCACCAACACTGTCCCAAGGTG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGAAGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: QTQHCLVQSSLCCWREREGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...TTCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGACAGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: IHLGQWFSPRSDFSSQGTGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...TGTCCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AGAATTCATTTGGGTCAGTGGTTCTCCCCCAGGAGTGATTTCTCCTCGCAGGGGGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: RIHLGQWFSPRSDFSSQGGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...CCCCTGCGAGGAGAAATCACTCCTGGGGGAGAACCACTGACCCAAATGAATTCT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCAAACACAACATTGTCTGGTCCAGTCCAGTCTATGCTGCTGGCGGGAGCGAGACTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: PNTTLSGPVQSMLLAGARLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...TCTCGCTCCCGCCAGCAGCATAGACTGGACTGGACCAGACAATGTTGTGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATACCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKIPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp TCTTCCCCATTCATTTCACAGGCACGCCCATTCTCTTCATCACTCTaGGTCTCTACTTTAACATTACTGGCCACGACTCTGTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: SSPFISQARPFSSSL*VSTLTLLATTLSLL
Trigger: CAAGAGTGACAGAGTCGTGGCCAGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAATGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
CDS TCA 90 bp GATCTCTCTGATCCTATCTTGCACAGGTCTTCTGCCATTTCACTGTaGTTAGTTTCTTCTTTAATGACGGAGTGCGTCCTCAGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: DLSDPILHRSSAISL*LVSSLMTECVLRWP
Trigger: TGGCCACCTGAGGACGCACTCCGTCATTAAAGAAGAAACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359197.9
ENST00000439701.2
ENST00000645066.1
CDS TCA 90 bp GTGTTGAGAAGTCCTTTACAAGGCTGTACCAGAACAAGGACTCTATaGCTCGGTACCACTTGGAACCAATCGCTTGCAACAACTGAGCTA +
Preference number: 5 (lower is better)
Translates to: VLRSPLQGCTRTRTL*LGTTWNQSLATTEL
Trigger: TAGCTCAGTTGTTGCAAGCGATTGGTTCCAAGTGGTACCGAGTCATAGAGTCCTTGTTCTGGTACAGCCTTGTAAAGGACTTCTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462201.1
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCGTNLA*ESSSRF
Trigger: GAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAGAAGGCGGCAGTCCTaGTGCTTTTCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LQQTDSKKALTLEILTWIRRRQS*CFSWGG
Trigger: GCCACCCCAGGAAAAGCACAAGGACTGCCGCCTTCT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SRKVAVLDAPNAALPLKINPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...TATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGCGGTCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: QRSGETSRKVAVLDAPNARASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...TGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGACCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGGAGACCCTTGCTTGTaGGGATTAGAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTGDPCL*GLESPH
Trigger: GTGTGGAGATTCTAATCCCAACAAGCAAGGGTCTCC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACACATGCTGGTTGATAGCATTAATCTaGAAGGAGACCCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: YPTGAEPAILCMCGHTCWLIALI*KETLAC
Trigger: ACAAGCAAGGGTCTCCTTCAAGATTAATGCTATCAA...CCAGCATGTGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACATGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TCTGGGGAAACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: SGETSRKVAVLDAPNAALLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...CAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGTTTCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAGAAATGTATCTCTTGTaGCCCTCCATCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTEMYLL*PSISTH
Trigger: GTGGGTGGAGATGGAGGGCAACAAGAGATACATTTC...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp GATCTCTCTGATCCTATCTTGCACAGGTCTTCTGCCATTTCACTGTaGTTAGTTTCTTCTTTAATGACTGGGTACAGTGTGCCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: DLSDPILHRSSAISL*LVSSLMTGYSVPGR
Trigger: CCTTCCGGGCACACTGTACCCAGTCATTAAAGAAGAAACTAATCACAGTGAAATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000438033.5
ENST00000471793.1
ENST00000615491.4
CDS TCA 90 bp GACTCTATGACTCGGTACCACTTGGAACCAATCGCTTGCAACAACTaGGCTACCAGTCAATTAGAAACATGCTCAGAACACAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: DSMTRYHLEPIACNN*ATSQLETCSEHKED
Trigger: GTCTTCCTTGTGTTCTGAGCATGTTTCTAATTGACTGGTAGCTCAGTTGTTGCAAGCGATTGGTTCCAAGTGGTACCGAGTCATAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462201.1
CDS GCA 90 bp ATTGCACTGGAAGGGCCGTTCTCGAGAGAAAGATTTGGGAATTATTaGATGGAAATCCCTAAAGTCATCAGCCCCATATGTAACCACGAC +
Preference number: 5 (lower is better)
Translates to: IALEGPFSRERFGNY*MEIPKVISPICNHD
Trigger: GTCGTGGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCGAGAACGGCCCTTCCAGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612658.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGTGGTTTAGAATTCATTaGGGTCAGTGGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMWFRIH*GQWFSP
Trigger: GGGGGAGAACCACTGACCCAAATGAATTCTAAACCA...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTTGCTGTCTAAAGCCCTaGATCCTCTGTCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFCCLKP*ILCLSS
Trigger: GGAAGAGAGACAGAGGATCAAGGGCTTTAGACAGCA...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAACGAGAGTGCATGGAATCTAGGCACACAGTAGTACACAGCGGTACCCAAGACCTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: QRECMESRHTVVHSGTQDLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...GTCTTGGGTACCGCTGTGTACTACTGTGTGCCTAGATTCCATGCACTCTCGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACATCTAGGAAGGTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: TSRKVAVLDAPNAALPLKVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...TTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTACCTTCCTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CTGAAGGGTCTGCTTCAACATATGCTCTGGCTGACACCTTCCTCAGACTTCACAATGTTCAGTTCTTTGTaGGTGACAGAAAATATGGCC +
Preference number: 5 (lower is better)
Translates to: LKGLLQHMLWLTPSSDFTMFSSL*VTENMA
Trigger: GGCCATATTTTCTGTCACCAACAAAGAACTGAACAT...TGTGAAGTCTGAGGAAGGTGTCAGCCAGAGCATATGTTGAAGCAGACCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS TCA 90 bp CATGTTCCCTCCTTGGCTATGGGGGCTTATGTAGCTGACCCACATTaGTCCAGTCTACCTCATTTTACCTGTATGTCCTTCATATTCTTT +
Preference number: 5 (lower is better)
Translates to: HVPSLAMGAYVADPH*SSLPHFTCMSFIFF
Trigger: AAAGAATATGAAGGACATACAGGTAAAATGAGGTAGACTGGATCAATGTGGGTCAGCTACATAAGCCCCCATAGCCAAGGAGGGAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS CCA 90 bp CACAATCCCCTCAGGTGTCAACTCACAGCATTATATCCCATAAAGTaGTTTGGAGCAATTACTGATGGGTTCAACATCTTAGAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: HNPLRCQLTALYPIK*FGAITDGFNILEGA
Trigger: TGCACCCTCTAAGATGTTGAACCCATCAGTAATTGCTCCAAACCACTTTATGGGATATAATGCTGTGAGTTGACACCTGAGGGGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGTTTGTGCGTCGCGCTTaGGGGCCAAGACTGATCCTC +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKFVRRA*GPRLIL
Trigger: GAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAA...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATACAGGTCCTAAGGGGATTATCAACTTGTATGGCTTTAAATATTCAGCTCTCTTCAGGTTATGTGGATTaGTGCGTCGCGCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: IQVLRGLSTCMALNIQLSSGYVD*CVALWG
Trigger: GCCCCAAAGCGCGACGCACAAATCCACATAACCTGA...AGAGAGCTGAATATTTAAAGCCATACAAGTTGATAATCCCCTTAGGACCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACAATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AACAAGACACAGCGATTACTAGCTGTAATCAACAGGCCAACCTGTTACCCTCCGGAGGAATGTTGCCGTTaGAGAGATTCAAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: NKTQRLLAVINRPTCYPPEECCR*RDSKRK
Trigger: CTTTCTTTTTGAATCTCTCAAACGGCAACATTCCTC...CGGAGGGTAACAGGTTGGCCTGTTGATTACAGCTAGTAATCGCTGTGTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCAGTTCATCTCGCGTTaGTTTTGGCAAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFQFISR*FWQEED
Trigger: GTCCTCTTCTTGCCAAAACAAACGCGAGATGAACTG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCCAGTGGTACATCCCTaGTTCACAGCTAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFPVVHP*FTAKQQ
Trigger: TTGCTGTTTAGCTGTGAACAAGGGATGTACCACTGG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKTTLSL*ELCCPP
Trigger: GGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
CDS-3UTR CAA 90 bp CCGGTCTCCAATATTTACTTCAAACACAACGAGAGTGCATGGAATCTAGGCACACTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 5 (lower is better)
Translates to: PVSNIYFKHNESAWNLGTLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...TGTGCCTAGATTCCATGCACTCTCGTTGTGTTTGAAGTAAATATTGGAGACCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp CATTCCAATATCCTACAGGTGCAGAGCCAGCCATCCTATGTATGTGTGGACACAAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: HSNILQVQSQPSYVCVDTRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...TGTGTCCACACATACATAGGATGGCTGGCTCTGCACCTGTAGGATATTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp TCAACTCACAGCATTATATCCCATAAAGTGGTTTGGAGCAATTACTaGTGGGTTCAACATCTTAGAGGGTGCAGCCCCAAACATTCTAGA +
Preference number: 5 (lower is better)
Translates to: STHSIISHKVVWSNY*WVQHLRGCSPKHSR
Trigger: TCTAGAATGTTTGGGGCTGCACCCTCTAAGATGTTGAACCCATCAGTAATTGCTCCAAACCACTTTATGGGATATAATGCTGTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS GCA 90 bp CCAGAAGCAAGGCATATACTTACGAGAGAAAGATTTGGGAATTATTaGATGGAAATCCCTAAAGTCATCAGCCCCATATGTAACCACGAC +
Preference number: 5 (lower is better)
Translates to: PEARHILTRERFGNY*MEIPKVISPICNHD
Trigger: GTCGTGGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCGTAAGTATATGCCTTGCTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CAA 90 bp CAGTCTGACAGACACGACTTTCCCCAACCAATTCATTTTCCTACGCAGAATATGGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: QSDRHDFPQPIHFPTQNMGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...CATATTCTGCGTAGGAAAATGAATTGGTTGGGGAAAGTCGTGTCTGTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTCTCTGTGATTGCATATaGAAGGAGTGCTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFLCDCI*KECCLK
Trigger: CTTTAGACAGCACTCCTTCAATATGCAATCACAGAG...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCTGGAAATGTATCTCTaGTTGCCCTCCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCLEMYL*LPSIST
Trigger: GGTGGAGATGGAGGGCAACAAGAGATACATTTCCAG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATGGGATCAGAAATTTTaGGTCTCCCAGTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LQQTDSKKALTLEILTWIWDQKF*VSQSPV
Trigger: GACTGGGGACTGGGAGACCAAAAATTTCTGATCCCA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS CCA 90 bp GATAGTCACAATTCCAACAGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCAGCCCCATATGTAACCACGACTCTG +
Preference number: 5 (lower is better)
Translates to: DSHNSNREKDLGIIA*KSLKSSAPYVTTTL
Trigger: CAGAGTCGTGGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCTGTTGGAATTGTGACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGGGCTTCCCAGACATTaGATTGGTTTAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFGLPRH*IGLEFI
Trigger: AATGAATTCTAAACCAATCAAATGTCTGGGAAGCCC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp GTAGCAGTTCTGGATGCTCCCAATGCAGCCCTGCCTCTAAAAATAAAAATCTTTGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: VAVLDAPNAALPLKIKIFVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...AAAGATTTTTATTTTTAGAGGCAGGGCTGCATTGGGAGCATCCAGAACTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACAGGTCCTAAGGGGATTATCAACTTGTATGGCTTTAAATATTCAGCTCTCTATAATGTATCTCGGGGGTaGATGAAGGAACATGCACGT +
Preference number: 5 (lower is better)
Translates to: TGPKGIINLYGFKYSALYNVSRG*MKEHAR
Trigger: ACGTGCATGTTCCTTCATCAACCCCCGAGATACATT...ATAGAGAGCTGAATATTTAAAGCCATACAAGTTGATAATCCCCTTAGGACCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGAACTTGGGACATGTCTaGACCCTCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKNLGHV*TLISIH
Trigger: ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGAAGGAGACCCTTGCTaGTTGGGATTAGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: ISGSSFSRKILRFYYVANEGDPC*LGLESP
Trigger: TGGAGATTCTAATCCCAACAAGCAAGGGTCTCCTTC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATGTATGTGTGGACACACATGCTGGCTTGCCTTTACAGTAAAGAGCTTCAACATCTAGGACTTTACCCTTaGCTGATATGCAATGATAAT +
Preference number: 5 (lower is better)
Translates to: MYVWTHMLACLYSKELQHLGLYP*LICNDN
Trigger: ATTATCATTGCATATCAGCAAAGGGTAAAGTCCTAG...ATGTTGAAGCTCTTTACTGTAAAGGCAAGCCAGCATGTGTGTCCACACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATATGGTATGTGAAGCAATaGGTGCTAGGACTTTACCCT +
Preference number: 5 (lower is better)
Translates to: LQQTDSKKALTLEILTWIWYVKQ*VLGLYP
Trigger: AGGGTAAAGTCCTAGCACCAATTGCTTCACATACCA...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGCATCTCGCGTTTGTTTaGGCAAGAAGAGGACACTAC +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKHLAFV*ARRGHY
Trigger: GTAGTGTCCTCTTCTTGCCAAAACAAACGCGAGATG...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS TCA 90 bp ATTCAGTTCAATTCTGACTCTGTCATTTCACCTTGGTTAATTCACTaGACTTCTCTCCGTCTTTGGTTTCTTGAAATAAAGAGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: IQFNSDSVISPWLIH*TSLRLWFLEIKRVG
Trigger: ACCCACCCTCTTTATTTCAAGAAACCAAAGACGGAGAGAAGTTCAGTGAATTAACCAAGGTGAAATGACAGAGTCAGAATTGAACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS TCA 90 bp AATGGAGCGAGAACTAGTTTTTCAGTCAGAAATTCAGTTCAATTCTaGCTCTGTCATTTCACCTTGGTTAATTCACTGAACTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: NGARTSFSVRNSVQF*LCHFTLVNSLNFSP
Trigger: CGGAGAGAAGTTCAGTGAATTAACCAAGGTGAAATGACAGAGTCAGAATTGAACTGAATTTCTGACTGAAAAACTAGTTCTCGCTCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGATAGAGCTCTTACGTTaGGCGACGTTACTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKIELLR*ATLLAS
Trigger: ACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTAT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp AAGAGAAACTTCAGCAACTTTTGGTACATGATATGGCCACCTTTTAAACATAAGAATCCAAACACAACATaGTCTGGTCCAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: KRNFSNFWYMIWPPFKHKNPNTT*SGPVQS
Trigger: AGACTGGACTGGACCAGACAATGTTGTGTTTGGATT...CTTATGTTTAAAAGGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATACTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 5 (lower is better)
Translates to: LQQTDSKKALTLEILTWILRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCCTGAGAAATTCAGGCTaGTGGCTACAAACAGATGTA +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCLRNSG*WLQTDV
Trigger: TACATCTGTTTGTAGCCACAAGCCTGAATTTCTCAG...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS CCA 90 bp GATAGTCACAATTCCAACAGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCAGCCCCATATGTAACTGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: DSHNSNREKDLGIIA*KSLKSSAPYVTAIK
Trigger: CTTTATTGCAGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCTGTTGGAATTGTGACTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATTCATTGCCTAGGTGGTaGAGAGTAATGACCTTAATG +
Preference number: 5 (lower is better)
Translates to: ISGSSFSRKILRFYYVANSLPRW*RVMTLM
Trigger: CATTAAGGTCATTACTCTCAACCACCTAGGCAATGA...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATAAACTTCAGCAACTTTaGGTACATGATATGGCCACC +
Preference number: 5 (lower is better)
Translates to: ISGSSFSRKILRFYYVANKLQQL*VHDMAT
Trigger: GGTGGCCATATCATGTACCAAAAGTTGCTGAAGTTT...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGAGAGTAATGACCTTAATGATTGATAGCATTAATCTTGAAGGAGACCCTTGCGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LRVMTLMIDSINLEGDPCVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...GCAAGGGTCTCCTTCAAGATTAATGCTATCAATCATTAAGGTCATTACTCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp TTGCAACAAACTGACTCTAAGAAGGCTCTCACCTTAGAGATATTAACTTGGATAAGAGCTTCAACATGTTaGAAAGCTTGGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: LQQTDSKKALTLEILTWIRASTC*KAWFQT
Trigger: TGTTTGAAACCAAGCTTTCAAACATGTTGAAGCTCT...TATCCAAGTTAATATCTCTAAGGTGAGAGCCTTCTTAGAGTCAGTTTGTTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ATCTCAGGCAGCTCTTTCTCAAGGAAGATTCTAAGATTTTATTATGTGGCTAATGTTGACCATTCATTATaGCTGGAACTGAAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: ISGSSFSRKILRFYYVANVDHSL*LELKKG
Trigger: TCCTTTCTTCAGTTCCAGCAATAATGAATGGTCAAC...ATTAGCCACATAATAAAATCTTAGAATCTTCCTTGAGAAAGAGCTGCCTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000440768.6
ENST00000615491.4
CDS-3UTR CAA 90 bp ACTAATACAGGTCCTAAGGGGATTATCAACTTGTATGGCTTTAAATATTCAGCTACCATGTTCAGTTCTTaGTTGGTGACAGAAAATATG +
Preference number: 5 (lower is better)
Translates to: TNTGPKGIINLYGFKYSATMFSS*LVTENM
Trigger: CATATTTTCTGTCACCAACAAAGAACTGAACATGGT...AGCTGAATATTTAAAGCCATACAAGTTGATAATCCCCTTAGGACCTGTATTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS GCA 72 bp GCGCGCAGAAGGGCGCAGAGCGGGACACGGAGAGGGTaGGTCGTCCCGTCCCCGCCCCGTCGCCGAGTCCCC +
Preference number: 6 (lower is better)
Translates to: ARRRAQSGTRRG*VVPSPPRRRVP
Trigger: GGGGACTCGGCGACGGGGCGGGGACGGGACGACGCACCCTCTCCGTGTCCCGCTCTGCGCCCTTCTGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000642219.1
CDS CAA 90 bp GCGAAGAGCAACCTCGGAGCCGGGGCTCCCTCTGCCCTGCCAGGCTaGCCCGCCTCGCCGCGGCCGAGCGTCCCGCCCAGGCTGGGATGC +
Preference number: 6 (lower is better)
Translates to: AKSNLGAGAPSALPG*PASPRPSVPPRLGC
Trigger: GCATCCCAGCCTGGGCGGGACGCTCGGCCGCGGCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCTCCGAGGTTGCTCTTCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000440768.6
ENST00000612658.4
ENST00000615491.4
ENST00000646110.1
CDS GCA 72 bp CGAAGAGCAACCTCGGAGCCGGGGCTCCCTCTGCCCTaGCAGGCTTGCCCGCCTCGCCGCGGCCGAGCGTCC +
Preference number: 6 (lower is better)
Translates to: RRATSEPGLPLP*QACPPRRGRAS
Trigger: GGACGCTCGGCCGCGGCGAGGCGGGCAAGCCTGGCAGGGCAGAGGGAGCCCCGGCTCCGAGGTTGCTCTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000440768.6
ENST00000612658.4
ENST00000615491.4
ENST00000646110.1
CDS TCA 72 bp CGGCGCGCAGCAGGTCGTAGGCGCGGTGCTCCTCCTTaGGCGACAGCCCGTTGCGCGCGTGCGGGGCGATGT +
Preference number: 6 (lower is better)
Translates to: RRAAGRRRGAPP*ATARCARAGRC
Trigger: ACATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGCCTACGACCTGCTGCGCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS GCA 72 bp CGGCGCTGTCCTGGGCCGAGTGGTTGGAGCGCGGGGTaGCCTCCGCGAGCGGCTTGTGCAGCTGGTACATCG +
Preference number: 6 (lower is better)
Translates to: RRCPGPSGWSAG*PPRAACAAGTS
Trigger: CGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CCA 72 bp GCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTGGTTaGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCA +
Preference number: 6 (lower is better)
Translates to: AGSPRRCPGPSG*SAGCPPRAACA
Trigger: TGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 72 bp AGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: SRFSTALSWAEW*ERGVPSASGLC
Trigger: GCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS GCA 72 bp GTCCTCAGGTTATCTCTCGGCCGCCTCCCGGATCGCTaGTCCGGTACAGGGAGCGGGGCGCGCAGAAGGGCG +
Preference number: 6 (lower is better)
Translates to: VLRLSLGRLPDR*SGTGSGARRRA
Trigger: CGCCCTTCTGCGCGCCCCGCTCCCTGTACCGGAGCAGCGATCCGGGAGGCGGCCGAGAGATAACCTGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000642219.1
CDS CCA 72 bp TTGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTaGGCCGAGTGGTTGGAGCGCGGGGTGCCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: LESSSRFSTALS*AEWLERGVPSA
Trigger: CGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 90 bp GAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCAGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: ESSSRFSTALSWAEW*ERGVPSASGLCSWY
Trigger: GTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CAA 90 bp TCCTGGGCCGAGTGGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGGCTGATGACCGGGACCACCTCGGAA +
Preference number: 6 (lower is better)
Translates to: SWAEWLERGVPSASG*CSWYIGLMTGTTSE
Trigger: TTCCGAGGTGGTCCCGGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CAA 90 bp CTGTTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: LLLGDASRSEGTNLA*ESSSRFSTALSWAE
Trigger: CTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 90 bp GAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGGGCCGAGTGGTaGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTGCAGCTTGATG +
Preference number: 6 (lower is better)
Translates to: ESSSRFSTALSWAEW*ERGVPSASGLCSLM
Trigger: CATCAAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612658.4
CDS CAA 90 bp GGGGCTTGCCGCAGTCACCGCCCCGGGCGCGGGCCGCGCAGTCACTaGTTAGAGTGTCCTGCTAACTTGGCCGCGGAGCTCTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: GACRSHRPGRGPRSH*LECPANLAAELFPA
Trigger: AGCTGGGAAGAGCTCCGCGGCCAAGTTAGCAGGACACTCTAACAAGTGACTGCGCGGCCCGCGCCCGGGGCGGTGACTGCGGCAAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646110.1
CDS GCA 72 bp TGGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTTGTaGAGCTGGTACATCGGGCTGATGACCGGGACCACC +
Preference number: 6 (lower is better)
Translates to: WLERGVPSASGL*SWYIGLMTGTT
Trigger: GGTGGTCCCGGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CAA 72 bp GAGTGGTTGGAGCGCGGGGTGCCCTCCGCGAGCGGCTaGTGCAGCTGGTACATCGGGCTGATGACCGGGACC +
Preference number: 6 (lower is better)
Translates to: EWLERGVPSASG*CSWYIGLMTGT
Trigger: GGTCCCGGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CAA 72 bp GGGGACGCCTCGCGCTCCGAGGGCACCAACTTGGCCTaGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: GDASRSEGTNLA*ESSSRFSTALS
Trigger: GGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 90 bp TGGCAGCTGTTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WQLLLGDASRSEGTN*ALESSSRFSTALSW
Trigger: CCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACAGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 72 bp GGGACGCCTCGCGCTCCGAGGGCACCAACTTGGCCTTaGAGAGCAGCAGCAGGTTCTCCACGGCGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: GTPRAPRAPTWP*RAAAGSPRRCP
Trigger: AGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 72 bp TTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAACTaGGCCTTGGAGAGCAGCAGCAGGTTCTCCACGGCG +
Preference number: 6 (lower is better)
Translates to: LLGDASRSEGTN*ALESSSRFSTA
Trigger: CGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 90 bp ACCGCTGCGCTGCTCCTCGTTGTTGCTCTCGGTGTCCGTGGAGTCTaGGCAGCTGTTGCTCGGGGACGCCTCGCGCTCCGAGGGCACCAA +
Preference number: 6 (lower is better)
Translates to: TAALLLVVALGVRGV*AAVARGRLALRGHQ
Trigger: TTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTCCACGGACACCGAGAGCAACAACGAGGAGCAGCGCAGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 72 bp CGCTGCGCTGCTCCTCGTTGTTGCTCTCGGTGTCCGTaGAGTCTTGGCAGCTGTTGCTCGGGGACGCCTCGC +
Preference number: 6 (lower is better)
Translates to: RCAAPRCCSRCP*SLGSCCSGTPR
Trigger: GCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTCCACGGACACCGAGAGCAACAACGAGGAGCAGCGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CAA 90 bp CGGGCGGTCATGGTCAAGGTGCCTGGGCTTCCCCCGGCTTTTGGCTaGAGAGGGTGGCATGAGGAGGCAGGTACTGGGTGGAGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: RAVMVKVPGLPPAFG*RGWHEEAGTGWSQC
Trigger: GCACTGGCTCCACCCAGTACCTGCCTCCTCATGCCACCCTCTCAAGCCAAAAGCCGGGGGAAGCCCAGGCACCTTGACCATGACCGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471793.1
CDS TCA 72 bp TGCGCGCGTGCGGGGCGATGTGGTTGGTCAGGTAGATaGGACCGCTGCGCTGCTCCTCGTTGTTGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: CARAGRCGWSGR*DRCAAPRCCSR
Trigger: CCGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACCACATCGCCCCGCACGCGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS TCA 72 bp CGCACTTGTACACCTTCATCTGCTCCCCGCTGGTGCTaGCCACGCGGAGCGCGTCCTGCGAGTTCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: RTCTPSSAPRWC*PRGARPASSRR
Trigger: CCTCCGAGAACTCGCAGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAAGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS TCA 72 bp TGCGGGGTGTGTGGCTCTCACGGCCATGCTGGCCTGTaGGTGTCCATCCTCCCACACACCAGAGGACCCCCA +
Preference number: 6 (lower is better)
Translates to: CGVCGSHGHAGL*VSILPHTRGPP
Trigger: TGGGGGTCCTCTGGTGTGTGGGAGGATGGACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS GCA 72 bp AGCACCCGGCAGTGTTCGCACTTGTACACCTTCATCTaGTCCCCGCTGGTGCTGACCACGCGGAGCGCGTCC +
Preference number: 6 (lower is better)
Translates to: STRQCSHLYTFI*SPLVLTTRSAS
Trigger: GGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCGGGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000612658.4
ENST00000615491.4
CDS CCA 72 bp GTGCCTGGGCTTCCCCCGGCTTTTGGCTTGAGAGGGTaGCATGAGGAGGCAGGTACTGGGTGGAGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: VPGLPPAFGLRG*HEEAGTGWSQC
Trigger: GCACTGGCTCCACCCAGTACCTGCCTCCTCATGCCACCCTCTCAAGCCAAAAGCCGGGGGAAGCCCAGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471793.1
CDS GCA 72 bp GGCCGTTCTCCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: GRSPTTLSLLEL*CPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGAGAACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343574.9
ENST00000438033.5
ENST00000645066.1
CDS GCA 72 bp CCCTTGTCCCCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PLSPTTLSLLEL*CPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGGGACAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426121.1
CDS CAA 90 bp GTCGGACAGGCCCTTGTCCCCCACGACTCTGTCACTCTTGGAGCTTaGCTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCAT +
Preference number: 6 (lower is better)
Translates to: VGQALVPHDSVTLGA*LSSRGGGEVLGDRH
Trigger: ATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGGGACAAGGGCCTGTCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426121.1
CDS CAA 90 bp GGGCTGCTCGGAGTTCCCCTCAGACCCAGCCACCTGGGAGGGATCTaGGTGCCTGGCTACAGGGCCTCTGTGTCCTCTTCCTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: GLLGVPLRPSHLGGI*VPGYRASVSSSSSK
Trigger: TTTGGAGGAGGAAGAGGACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGAGGGGAACTCCGAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438033.5
ENST00000439701.2
CDS CAA 90 bp GCACAGAGGCCGCTGGTGACCCACTTACCCACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: AQRPLVTHLPTTLSL*ELCCPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGTAAGTGGGTCACCAGCGGCCTCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 90 bp GCCGCTGGTGACCCACTTACCCACGACTCTGTCACTCTTGGAGCTTaGCTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCAT +
Preference number: 6 (lower is better)
Translates to: AAGDPLTHDSVTLGA*LSSRGGGEVLGDRH
Trigger: ATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGTAAGTGGGTCACCAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS TCA 72 bp TGGTCAAGGTGCCTGGGCTTCCCCCGGCTTTTGGCTTaGGAGGGTGGCATGAGGAGGCAGGTACTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: WSRCLGFPRLLA*EGGMRRQVLGG
Trigger: TCCACCCAGTACCTGCCTCCTCATGCCACCCTCTCAAGCCAAAAGCCGGGGGAAGCCCAGGCACCTTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471793.1
CDS GCA 72 bp TTCCCCTCAGACCCAGCCACCTGGGAGGGATCTTGGTaGCTGGCTACAGGGCCTCTGTGTCCTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: FPSDPATWEGSW*LATGPLCPLPP
Trigger: AGGAGGAAGAGGACACAGAGGCCCTGTAGCCAGGCACCAAGATCCCTCCCAGGTGGCTGGGTCTGAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438033.5
ENST00000439701.2
ENST00000492782.6
CDS CCA 72 bp TGTCACTCTTGGAGCTTTGCTGTCCTCCCGAGGTGGTaGAGAGGTCCTCGGGGATCGGCATGGGCTCATCGC +
Preference number: 6 (lower is better)
Translates to: CHSWSFAVLPRW*RGPRGSAWAHR
Trigger: GCGATGAGCCCATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000426121.1
ENST00000438033.5
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
ENST00000484847.6
ENST00000492782.6
ENST00000612658.4
ENST00000641948.1
ENST00000642219.1
ENST00000645066.1
ENST00000646110.1
CDS CCA 72 bp CGGACAGGCCCTTGTCCCCCACGACTCTGTCACTCTTaGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: RTGPCPPRLCHS*SFAVLPRWWRG
Trigger: ACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGGGACAAGGGCCTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426121.1
CDS TCA 72 bp TATGTGGATTTGTGCGTCGCGCTTTGGGGCCAAGACTaGTCCTCGGGTGCGAAGAGCAACCTCGGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: YVDLCVALWGQD*SSGAKSNLGAG
Trigger: CCCGGCTCCGAGGTTGCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAATCCACATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000440768.6
ENST00000612658.4
ENST00000615491.4
ENST00000646110.1
CDS GCA 72 bp ACCCACTTACCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: THLPTTLSLLEL*CPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGTAAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CCA 72 bp GACATTTTGCGGGGTGTGTGGCTCTCACGGCCATGCTaGCCTGTGAGTGTCCATCCTCCCACACACCAGAGG +
Preference number: 6 (lower is better)
Translates to: DILRGVWLSRPC*PVSVHPPTHQR
Trigger: CCTCTGGTGTGTGGGAGGATGGACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 72 bp CACTGGAAGGGCCGTTCTCCCACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: HWKGRSPTTLSL*ELCCPPEVVER
Trigger: CCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGAGAACGGCCCTTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343574.9
ENST00000438033.5
ENST00000645066.1
CDS CAA 72 bp CCGCTGGTGACCCACTTACCCACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PLVTHLPTTLSL*ELCCPPEVVER
Trigger: CCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGTAAGTGGGTCACCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 72 bp CGTCCCTGGGCAGGATTGCTCCTCAACTTGGACATTTaGCGGGGTGTGTGGCTCTCACGGCCATGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RPWAGLLLNLDI*RGVWLSRPCWP
Trigger: AGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 72 bp CAGCCTGGCAGATGGGCAATGCGGGCGCTCCTGTCTTaGTCCCTCAATCTTTCTGGGCCCTTGCCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QPGRWAMRALLS*SLNLSGPLPQP
Trigger: AGGCTGAGGCAAGGGCCCAGAAAGATTGAGGGACAAAGACAGGAGCGCCCGCATTGCCCATCTGCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS CAA 90 bp ACAGAGACGCGTCCCTGGGCAGGATTGCTCCTCAACTTGGACATTTaGCGGGGTGTGTGGCTCTCACGGCCATGCTGGCCTGTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: TETRPWAGLLLNLDI*RGVWLSRPCWPVSV
Trigger: GACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGGACGCGTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 90 bp AGGACAGTGACAGAGACGCGTCCCTGGGCAGGATTGCTCCTCAACTaGGACATTTTGCGGGGTGTGTGGCTCTCACGGCCATGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RTVTETRPWAGLLLN*DILRGVWLSRPCWP
Trigger: AGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGGACGCGTCTCTGTCACTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS GCA 72 bp ACATTACTGGCCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: TLLATTLSLLEL*CPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGCCAGTAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
CDS GCA 72 bp TTGGACATTTTGCGGGGTGTGTGGCTCTCACGGCCATaGTGGCCTGTGAGTGTCCATCCTCCCACACACCAG +
Preference number: 6 (lower is better)
Translates to: LDILRGVWLSRP*WPVSVHPPTHQ
Trigger: CTGGTGTGTGGGAGGATGGACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CCA 72 bp ACTGGAAGGGCCGTTCTCCCACGACTCTGTCACTCTTaGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: TGRAVLPRLCHS*SFAVLPRWWRG
Trigger: ACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGGAGAACGGCCCTTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343574.9
ENST00000438033.5
ENST00000645066.1
CDS CCA 72 bp CGTGGGACTTCATCATTTCGTTCTCCTTCTCGTAGCTaGCGCTGCTGTCGTAGGGCGTGTCGGACAGGCCCT +
Preference number: 6 (lower is better)
Translates to: RGTSSFRSPSRS*RCCRRACRTGP
Trigger: AGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000426121.1
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS CCA 72 bp CAGAGACGCGTCCCTGGGCAGGATTGCTCCTCAACTTaGACATTTTGCGGGGTGTGTGGCTCTCACGGCCAT +
Preference number: 6 (lower is better)
Translates to: QRRVPGQDCSST*TFCGVCGSHGH
Trigger: ATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGGACGCGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 72 bp ACAGAGACGCGTCCCTGGGCAGGATTGCTCCTCAACTaGGACATTTTGCGGGGTGTGTGGCTCTCACGGCCA +
Preference number: 6 (lower is better)
Translates to: TETRPWAGLLLN*DILRGVWLSRP
Trigger: TGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGGACGCGTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 90 bp ATACACCTCCAGCCTGGCAGATGGGCAATGCGGGCGCTCCTGTCTTaGTCCCTCAATCTTTCTGGGCCCTTGCCTCAGCCTTCACCAGCA +
Preference number: 6 (lower is better)
Translates to: IHLQPGRWAMRALLS*SLNLSGPLPQPSPA
Trigger: TGCTGGTGAAGGCTGAGGCAAGGGCCCAGAAAGATTGAGGGACAAAGACAGGAGCGCCCGCATTGCCCATCTGCCAGGCTGGAGGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS CAA 90 bp GTCATCAGCCCCATATGTAACCACGACTCTGTCACTCTTGGAGCTTaGCTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCAT +
Preference number: 6 (lower is better)
Translates to: VISPICNHDSVTLGA*LSSRGGGEVLGDRH
Trigger: ATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGTTACATATGGGGCTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413698.5
ENST00000492782.6
ENST00000612658.4
ENST00000642219.1
ENST00000646110.1
CDS GCA 72 bp ACTTCATCATTTCGTTCTCCTTCTCGTAGCTGGCGCTaGTGTCGTAGGGCGTGTCGGACAGGCCCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: TSSFRSPSRSWR*CRRACRTGPCP
Trigger: GGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000426121.1
ENST00000438033.5
ENST00000439701.2
ENST00000440768.6
ENST00000471793.1
ENST00000615491.4
CDS GCA 72 bp CCATATGTAACCACGACTCTGTCACTCTTGGAGCTTTaGTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PYVTTTLSLLEL*CPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGTTACATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413698.5
ENST00000492782.6
ENST00000612658.4
ENST00000642219.1
ENST00000646110.1
CDS CCA 72 bp AAACTTGGGACATGTCTTGACCCTCATCAGCATCCATaGTCCTCAGGTTATCTGCTGGCGCCGCCGCCGGCT +
Preference number: 6 (lower is better)
Translates to: KLGTCLDPHQHP*SSGYLLAPPPA
Trigger: AGCCGGCGGCGGCGCCAGCAGATAACCTGAGGACCATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645066.1
CDS CAA 72 bp CAGAGGACAGTGACAGAGACGCGTCCCTGGGCAGGATaGCTCCTCAACTTGGACATTTTGCGGGGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: QRTVTETRPWAG*LLNLDILRGVW
Trigger: CCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCCTGCCCAGGGACGCGTCTCTGTCACTGTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 90 bp TCCCTAAAGTCATCAGCCCCATATGTAACCACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SLKSSAPYVTTTLSL*ELCCPPEVVERSSG
Trigger: CCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGTTACATATGGGGCTGATGACTTTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413698.5
ENST00000492782.6
ENST00000612658.4
ENST00000642219.1
ENST00000646110.1
CDS CCA 72 bp GGATTGCTCCTCAACTTGGACATTTTGCGGGGTGTGTaGCTCTCACGGCCATGCTGGCCTGTGAGTGTCCAT +
Preference number: 6 (lower is better)
Translates to: GLLLNLDILRGV*LSRPCWPVSVH
Trigger: ATGGACACTCACAGGCCAGCATGGCCGTGAGAGCCACACACCCCGCAAAATGTCCAAGTTGAGGAGCAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS CAA 90 bp CTCTACTTTAACATTACTGGCCACGACTCTGTCACTCTTGGAGCTTaGCTGTCCTCCCGAGGTGGTGGAGAGGTCCTCGGGGATCGGCAT +
Preference number: 6 (lower is better)
Translates to: LYFNITGHDSVTLGA*LSSRGGGEVLGDRH
Trigger: ATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGCCAGTAATGTTAAAGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
CDS GCA 72 bp ACTGTGACTCCAACCCTTACTGTTACTCCACTGCCATaGTCCCAGGACACCGCACAACTGCCTAGACCTTCG +
Preference number: 6 (lower is better)
Translates to: TVTPTLTVTPLP*SQDTAQLPRPS
Trigger: CGAAGGTCTAGGCAGTTGTGCGGTGTCCTGGGAGCATGGCAGTGGAGTAACAGTAAGGGTTGGAGTCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS CCA 72 bp AAACTTGGGACATGTCTTGACCCTCATCAGCATCCATaGTCCTCAGGTTATCTCTCGGCCGCCTCCCGGATC +
Preference number: 6 (lower is better)
Translates to: KLGTCLDPHQHP*SSGYLSAASRI
Trigger: GATCCGGGAGGCGGCCGAGAGATAACCTGAGGACCATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000642219.1
CDS CAA 72 bp ATGGTCCTCAGGTTATGTGGATTTGTGCGTCGCGCTTaGGGGCCAAGACTGATCCTCGGGTGCGAAGAGCAA +
Preference number: 6 (lower is better)
Translates to: MVLRLCGFVRRA*GPRLILGCEEQ
Trigger: TTGCTCTTCGCACCCGAGGATCAGTCTTGGCCCCAAAGCGCGACGCACAAATCCACATAACCTGAGGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331340.8
ENST00000343574.9
ENST00000346667.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000413698.5
ENST00000440768.6
ENST00000612658.4
ENST00000615491.4
ENST00000646110.1
CDS CAA 72 bp TCATCAGCCCCATATGTAACCACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SSAPYVTTTLSL*ELCCPPEVVER
Trigger: CCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGTTACATATGGGGCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413698.5
ENST00000492782.6
ENST00000612658.4
ENST00000642219.1
ENST00000646110.1
CDS CCA 72 bp GCACTACCTCCATCAATAATGAATACACCTCCAGCCTaGCAGATGGGCAATGCGGGCGCTCCTGTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: ALPPSIMNTPPA*QMGNAGAPVFV
Trigger: GACAAAGACAGGAGCGCCCGCATTGCCCATCTGCCAGGCTGGAGGTGTATTCATTATTGATGGAGGTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS CCA 72 bp AAACTTGGGACATGTCTTGACCCTCATCAGCATCCATaGTCCTCAGGTTATCAACCAACCGAGGCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: KLGTCLDPHQHP*SSGYQPTEASP
Trigger: TGGCGAGGCCTCGGTTGGTTGATAACCTGAGGACCATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438033.5
ENST00000439701.2
ENST00000462201.1
ENST00000492782.6
CDS CAA 72 bp TCTACTTTAACATTACTGGCCACGACTCTGTCACTCTaGGAGCTTTGCTGTCCTCCCGAGGTGGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: STLTLLATTLSL*ELCCPPEVVER
Trigger: CCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTGACAGAGTCGTGGCCAGTAATGTTAAAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
CDS CCA 72 bp AAACTTGGGACATGTCTTGACCCTCATCAGCATCCATaGTCCTCAGGTTATCCAGGCAGGGCTGCATATCTG +
Preference number: 6 (lower is better)
Translates to: KLGTCLDPHQHP*SSGYPGRAAYL
Trigger: CAGATATGCAGCCCTGCCTGGATAACCTGAGGACCATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS TCA 72 bp AGCATCTGCGAAGTAACAATCCCATCAGTGCTACTGTaGCTCCAACCCTTACTGTTACTCCACTGCCATGCT +
Preference number: 6 (lower is better)
Translates to: SICEVTIPSVLL*LQPLLLLHCHA
Trigger: AGCATGGCAGTGGAGTAACAGTAAGGGTTGGAGTCACAGTAGCACTGATGGGATTGTTACTTCGCAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS TCA 72 bp ACATGTTCCCTCCTTGGCTATGGGGGCTTATGTAGCTaGCCCACATTGATCCAGTCTACCTCATTTTACCTG +
Preference number: 6 (lower is better)
Translates to: TCSLLGYGGLCS*PTLIQSTSFYL
Trigger: CAGGTAAAATGAGGTAGACTGGATCAATGTGGGTCAGCTACATAAGCCCCCATAGCCAAGGAGGGAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS CAA 90 bp TTGGTTGCTGTTTTGCGGGGGAAGGCATCAAGACCAAGTAGCCGCTaGTGTGAGAAGATAGTCACAATTCCAACAGAGAGAAAGATTTGG +
Preference number: 6 (lower is better)
Translates to: LVAVLRGKASRPSSR*CEKIVTIPTERKIW
Trigger: CCAAATCTTTCTCTCTGTTGGAATTGTGACTATCTTCTCACACAAGCGGCTACTTGGTCTTGATGCCTTCCCCCGCAAAACAGCAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000492119.1
ENST00000492782.6
ENST00000646110.1
CDS TCA 72 bp TCCTTGGCTATGGGGGCTTATGTAGCTGACCCACATTaGTCCAGTCTACCTCATTTTACCTGTATGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SLAMGAYVADPH*SSLPHFTCMSF
Trigger: GAAGGACATACAGGTAAAATGAGGTAGACTGGATCAATGTGGGTCAGCTACATAAGCCCCCATAGCCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS CAA 90 bp CCAGAACAAGGACTCTATGACTCGGTACCACTTGGAACCAATCGCTaGCAACAACTGAGCTACCAGTCAATTAGAAACATGCTCAGAACA +
Preference number: 6 (lower is better)
Translates to: PEQGLYDSVPLGTNR*QQLSYQSIRNMLRT
Trigger: TGTTCTGAGCATGTTTCTAATTGACTGGTAGCTCAGTTGTTGCAAGCGATTGGTTCCAAGTGGTACCGAGTCATAGAGTCCTTGTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462201.1
CDS TCA 72 bp TTCATTTCACAGGCACGCCCATTCTCTTCATCACTCTaGGTCTCTACTTTAACATTACTGGCCACGACTCTG +
Preference number: 6 (lower is better)
Translates to: FISQARPFSSSL*VSTLTLLATTL
Trigger: CAGAGTCGTGGCCAGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331340.8
ENST00000349824.8
ENST00000357364.8
ENST00000359197.9
ENST00000439701.2
ENST00000462201.1
ENST00000471793.1
CDS TCA 72 bp ACTCGGTACCACTTGGAACCAATCGCTTGCAACAACTaGGCTACCAGTCAATTAGAAACATGCTCAGAACAC +
Preference number: 6 (lower is better)
Translates to: TRYHLEPIACNN*ATSQLETCSEH
Trigger: GTGTTCTGAGCATGTTTCTAATTGACTGGTAGCTCAGTTGTTGCAAGCGATTGGTTCCAAGTGGTACCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462201.1
CDS TCA 72 bp TGGCCCTTCTATAGGCAACAGAAAAGTAATTACTCATaGACAGGACCACAATCCCCTCAGGTGTCAACTCAC +
Preference number: 6 (lower is better)
Translates to: WPFYRQQKSNYS*TGPQSPQVSTH
Trigger: GTGAGTTGACACCTGAGGGGATTGTGGTCCTGTTCATGAGTAATTACTTTTCTGTTGCCTATAGAAGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS CAA 72 bp GGACTCTATGACTCGGTACCACTTGGAACCAATCGCTaGCAACAACTGAGCTACCAGTCAATTAGAAACATG +
Preference number: 6 (lower is better)
Translates to: GLYDSVPLGTNR*QQLSYQSIRNM
Trigger: CATGTTTCTAATTGACTGGTAGCTCAGTTGTTGCAAGCGATTGGTTCCAAGTGGTACCGAGTCATAGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462201.1
CDS CCA 72 bp GGCCGTTCTCGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCAGCCCCATATGTAACC +
Preference number: 6 (lower is better)
Translates to: GRSREKDLGIIA*KSLKSSAPYVT
Trigger: GGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCGAGAACGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612658.4
CDS TCA 72 bp AGCATTATATCCCATAAAGTGGTTTGGAGCAATTACTaGTGGGTTCAACATCTTAGAGGGTGCAGCCCCAAA +
Preference number: 6 (lower is better)
Translates to: SIISHKVVWSNY*WVQHLRGCSPK
Trigger: TTTGGGGCTGCACCCTCTAAGATGTTGAACCCATCAGTAATTGCTCCAAACCACTTTATGGGATATAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS CCA 72 bp CTCAGGTGTCAACTCACAGCATTATATCCCATAAAGTaGTTTGGAGCAATTACTGATGGGTTCAACATCTTA +
Preference number: 6 (lower is better)
Translates to: LRCQLTALYPIK*FGAITDGFNIL
Trigger: TAAGATGTTGAACCCATCAGTAATTGCTCCAAACCACTTTATGGGATATAATGCTGTGAGTTGACACCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS CCA 72 bp AATTCCAACAGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCAGCCCCATATGTAACC +
Preference number: 6 (lower is better)
Translates to: NSNREKDLGIIA*KSLKSSAPYVT
Trigger: GGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCTGTTGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492782.6
ENST00000646110.1
CDS CCA 72 bp ATATACTTACGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCAGCCCCATATGTAACC +
Preference number: 6 (lower is better)
Translates to: IYLREKDLGIIA*KSLKSSAPYVT
Trigger: GGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCGTAAGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS CCA 72 bp AATTCCAACAGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGTCATCAGCCCCATATGTAACT +
Preference number: 6 (lower is better)
Translates to: NSNREKDLGIIA*KSLKSSAPYVT
Trigger: AGTTACATATGGGGCTGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCTGTTGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492119.1
CDS CAA 72 bp TTCCAGAAGCAAGGCATATACTTACGAGAGAAAGATTaGGGAATTATTGCATGGAAATCCCTAAAGTCATCA +
Preference number: 6 (lower is better)
Translates to: FQKQGIYLREKD*GIIAWKSLKSS
Trigger: TGATGACTTTAGGGATTTCCATGCAATAATTCCCAAATCTTTCTCTCGTAAGTATATGCCTTGCTTCTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413698.5
CDS TCA 72 bp TTTAATATGCCAGTTGAGGGAACACAATGGATAAAATaGCTTGCATCCCTTCATCACTGTCTTGGAAAAATA +
Preference number: 6 (lower is better)
Translates to: FNMPVEGTQWIK*LASLHHCLGKI
Trigger: TATTTTTCCAAGACAGTGATGAAGGGATGCAAGTCATTTTATCCATTGTGTTCCCTCAACTGGCATATTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484847.6
ENST00000641948.1
CDS TCA 72 bp AATTCTGACTCTGTCATTTCACCTTGGTTAATTCACTaGACTTCTCTCCGTCTTTGGTTTCTTGAAATAAAG +
Preference number: 6 (lower is better)
Translates to: NSDSVISPWLIH*TSLRLWFLEIK
Trigger: CTTTATTTCAAGAAACCAAAGACGGAGAGAAGTTCAGTGAATTAACCAAGGTGAAATGACAGAGTCAGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641948.1
CDS TCA 72 bp AGAACTAGTTTTTCAGTCAGAAATTCAGTTCAATTCTaGCTCTGTCATTTCACCTTGGTTAATTCACTGAAC +
Preference number: 6 (lower is better)
Translates to: RTSFSVRNSVQF*LCHFTLVNSLN
Trigger: GTTCAGTGAATTAACCAAGGTGAAATGACAGAGTCAGAATTGAACTGAATTTCTGACTGAAAAACTAGTTCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641948.1