RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IKBKE (Homo sapiens)

Ensembl gene IDs: ENSG00000263528

Ensembl transcript IDs: ENST00000578328.6, ENST00000579827.6, ENST00000581977.7, ENST00000584998.5, ENST00000605726.1, ENST00000605818.5

Found 423 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGGCGACATCCTGGCCAGCAGCCAGGAGGGAGGTAGGCTGATGTaGTGGGATGGGATCTTGCCCTGGGTTGGTCTCATGGTGCAGAAG +
Preference number: 1 (lower is better)
Translates to: AGDILASSQEGGRLM*WDGILPWVGLMVQK
Trigger: CTTCTGCACCATGAGACCAACCCAGGGCAAGATCCCATCCCATCACATCAGCCTACCTCCCTCCTGGCTGCTGGCCAGGATGTCGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR GCA 90 bp TCCTGTGGGTCCCAACAGAGGTGGCCTGGTGCCCAGTCTCAGCTGTaGTGCTTCCCAGGGAGAAAGGCAGTGGAAGGTAATGCTGGCGAC +
Preference number: 1 (lower is better)
Translates to: SCGSQQRWPGAQSQL*CFPGRKAVEGNAGD
Trigger: GTCGCCAGCATTACCTTCCACTGCCTTTCTCCCTGGGAAGCAGCACAGCTGAGACTGGGCACCAGGCCACCTCTGTTGGGACCCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR TCA 90 bp GTAATGCTGGCGACATCCTGGCCAGCAGCCAGGAGGGAGGTAGGCTaGTGTGATGGGATGGGATCTTGCCCTGGGTTGGTCTCATGGTGC +
Preference number: 1 (lower is better)
Translates to: VMLATSWPAARREVG*CDGMGSCPGLVSWC
Trigger: GCACCATGAGACCAACCCAGGGCAAGATCCCATCCCATCACATCAGCCTACCTCCCTCCTGGCTGCTGGCCAGGATGTCGCCAGCATTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR GCA 90 bp GGCTCAGTCAGACCAAGCATAGAAAGAACAGGAGGCTCTCTATGTTaGCTGAGGCTGGCAGTGGTGACCCTCAGAAATCACAAGGGAGCG +
Preference number: 1 (lower is better)
Translates to: GSVRPSIERTGGSLC*LRLAVVTLRNHKGA
Trigger: CGCTCCCTTGTGATTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTTTCTATGCTTGGTCTGACTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR CCA 90 bp TGGGATCTTGCCCTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTaGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAG +
Preference number: 1 (lower is better)
Translates to: WDLALGWSHGAEEQC*NHSNASGCLMCPME
Trigger: CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAGGGCAAGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
3UTR-3UTR CCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGATGCTGGCGACATCCTaGCCAGCAGCCAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRMLATS*PAARRE
Trigger: CTCCCTCCTGGCTGCTGGCCAGGATGTCGCCAGCAT...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR GCA 90 bp TTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGGCTAGGTCTAATGCTTCAGGATaGCTCATGTGCCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: FDLLPWGNPRRPPLLLARSNASG*LMCPME
Trigger: CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA...CCTAGCCAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR GCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAAACAGAGGTGGCCTGGTaGCCAGTCTCAGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKTEVAW*PVSAVL
Trigger: CAGCACAGCTGAGACTGGGCACCAGGCCACCTCTGT...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR CCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCGGGTCCCAACAGAGGTaGCCTGGTGCCCAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAGSQQR*PGAQSQ
Trigger: CTGAGACTGGGCACCAGGCCACCTCTGTTGGGACCC...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR GCA 90 bp CCCAGCCATGGGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCGATGGGATGGGATCTTaGCCTGGGTTGGTCTCATGG +
Preference number: 2 (lower is better)
Translates to: PSHGHGGAVPEPREDRKVDGMGS*PGLVSW
Trigger: CCATGAGACCAACCCAGGGCAAGATCCCATCCCATC...GACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCCCATGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR CCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCGGCCTCCTCTCCTGTTaGCTAGGGAGTGAAGTCCTA +
Preference number: 2 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAGLLSC*LGSEVL
Trigger: TAGGACTTCACTCCCTAGCCAACAGGAGAGGAGGCC...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR TCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCTGTGATGAGGTCGTTTaGCCTACTGCCCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: EAKATFIPLLEGAGLGPACDEVV*PTALGK
Trigger: TTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACA...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR CCA 90 bp TTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGGCTAGGGCAGAAGAGCAGTGTTaGAATCATTCTAATGCTTCA +
Preference number: 2 (lower is better)
Translates to: FDLLPWGNPRRPPLLLARAEEQC*NHSNAS
Trigger: TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC...CCTAGCCAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR CCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCCAGGGAGAAAGGCAGTaGAAGGTAATGCTGGCGACA +
Preference number: 2 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAQGERQ*KVMLAT
Trigger: TGTCGCCAGCATTACCTTCCACTGCCTTTCTCCCTG...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGCCTCATGTGCCCCATaGAGCTCAGACATCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASASCAP*SSDIRR
Trigger: CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
3UTR-3UTR TCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATATTTAGCCGTTCGATaGTGCGGTTGTTGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASYLAVR*CGCCPG
Trigger: TCCTGGACAACAACCGCATCATCGAACGGCTAAATA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578328.6
3UTR CCA 72 bp AGGTGCAGGCCTTGGACCTGCCCAGACTCACAGTCCTaGCTGCATGTCCCAGGACCAGCTGGAGCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: RCRPWTCPDSQS*LHVPGPAGASE
Trigger: CTCTGAGGCTCCAGCTGGTCCTGGGACATGCAGCCAGGACTGTGAGTCTGGGCAGGTCCAAGGCCTGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR-3UTR CAA 90 bp CCAGCTGGAGCCTCAGAGAGTGAGGGAGAGCCAAAGGGGCCCCAAGACACTGGCGGATCTTGCCCTGGGTaGGTCTCATGGTGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: PAGASESEGEPKGPQDTGGSCPG*VSWCRR
Trigger: TCTTCTGCACCATGAGACCAACCCAGGGCAAGATCC...GCCAGTGTCTTGGGGCCCCTTTGGCTCTCCCTCACTCTCTGAGGCTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR CCA 72 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTaGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGGCT +
Preference number: 3 (lower is better)
Translates to: RKTVMRSFDLLP*GNPRRPPLLLA
Trigger: AGCCAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
3UTR GCA 72 bp AGACCAAGCATAGAAAGAACAGGAGGCTCTCTATGTTaGCTGAGGCTGGCAGTGGTGACCCTCAGAAATCAC +
Preference number: 3 (lower is better)
Translates to: RPSIERTGGSLC*LRLAVVTLRNH
Trigger: GTGATTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTTTCTATGCTTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp GGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCAGCCAGGCAGGGAGGCGGCGAGGCCTaGGCCCCCTTTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: GMEEQYLSLEKIERSARQGGGEA*APFARS
Trigger: GGACCGAGCAAAGGGGGCTCAGGCCTCGCCGCCTCC...CTGCCTGGCTGACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp CCAGCTGGAGCCTCAGAGAGTGAGGGAGAGCCAAAGGGGCCCCAAGACACTGGCGGAGGCTCTCTATGTTaGCTGAGGCTGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PAGASESEGEPKGPQDTGGGSLC*LRLAVV
Trigger: CACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCC...GCCAGTGTCTTGGGGCCCCTTTGGCTCTCCCTCACTCTCTGAGGCTCCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp GGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCAGCCAGGCAGAGAGGGTCAGGGGGCTaGTTGCCGTCGTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GMEEQYLSLEKIERSARQRGSGG*LPSCGR
Trigger: TCGCCCACACGACGGCAAGCAGCCCCCTGACCCTCT...CTGCCTGGCTGACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGTGGGGTAAGGAGCTATaGGAGGCGGCGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRWGKEL*EAARPE
Trigger: CTCAGGCCTCGCCGCCTCCCATAGCTCCTTACCCCA...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CCAGCTGGAGCCTCAGAGAGTGAGGGAGAGCCAAAGGGGCCCCAAGACACTGGCCACTGGCACTGGCCTTaGCCACCCATTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: PAGASESEGEPKGPQDTGHWHWP*PPIFST
Trigger: AGTTGAGAAAATGGGTGGCCAAGGCCAGTGCCAGTG...GCCAGTGTCTTGGGGCCCCTTTGGCTCTCCCTCACTCTCTGAGGCTCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGGCTCTGCAGCCCCAGTaGCAGCTGGCAGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SNASGCLMCPMELRHQEVALQPQ*QLAGDG
Trigger: CCCATCACCTGCCAGCTGTCACTGGGGCTGCAGAGC...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp AGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGTGGACGACAACTCGCTaGAGGATGTCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSFDLLPWGNPRRPPLLLWTTTR*RMSLVS
Trigger: GGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCA...CAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp GGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCAGCCAGGCAGGCTCCCGGTTCAGGCTaGTCAGGCTCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GMEEQYLSLEKIERSARQAPGSG*SGSPGS
Trigger: AGACCCAGGAGAGCCTGAGCAGCCTGAACCGGGAGC...CTGCCTGGCTGACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGCCGTTCTCCCGCCTCTaGGCACCTGCAATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SNASGCLMCPMELRHQEVPFSRL*APAMAP
Trigger: TGGGGCCATTGCAGGTGCCCAGAGGCGGGAGAACGG...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAACCGTTCTCCCGCCTCTaGGCACCTGCAATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKPFSRL*APAMAP
Trigger: TGGGGCCATTGCAGGTGCCCAGAGGCGGGAGAACGG...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCGGCACGTCCAGGAGCTaGGCCCATCTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAGTSRS*AHLHCR
Trigger: CCTGCAGTGGAGATGGGCTCAGCTCCTGGACGTGCC...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGAGGCGGCGAGGCCTaGGCCCCCTTTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASGGGEA*APFARS
Trigger: GGACCGAGCAAAGGGGGCTCAGGCCTCGCCGCCTCC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCCTGGCAGTGGCCCCCTaGCCCAGCAGGTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPALAVAP*PSRSSV
Trigger: CACAGATGACCTGCTGGGGCAGGGGGCCACTGCCAG...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCAGTTGCAATGTCTGTaGCACCCCAGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRQLQCL*HPRSWD
Trigger: GTCCCAGCTCCTGGGGTGGCACAGACATTGCAACTG...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGACAGGCAGGGCCAGTTaGAATGTCTGTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRTGRAS*NVCATP
Trigger: TGGGGTGGCACAGACATTGCAACTGGCCCTGCCTGT...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAAGTCGTGTGGGCGATGTaGTGTGCTGAGACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKVVWAM*CAETLG
Trigger: GCCCAGCGTCTCAGCACAGCACATCGCCCACACGAC...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATCCAGCAGGGCCCGTaGCAGCCGCAGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPIQQGP*QPQGLV
Trigger: TACCAGGCCCTGCGGCTGGCACGGGCCCTGCTGGAT...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGAGTGGGTTTCTTCCCTaGCTCCTTGTGGCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRSGFLP*LLVAVG
Trigger: TCCCACCGCCACAAGGAGGCAGGGAAGAAACCCACT...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGGCTAGGCTGCCAGTGGCTGCATaGTACAAGGTCACTCCAATG +
Preference number: 4 (lower is better)
Translates to: FDLLPWGNPRRPPLLLARLPVAA*YKVTPM
Trigger: CATTGGAGTGACCTTGTACCATGCAGCCACTGGCAG...CCTAGCCAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGGCTGCAGGATGTCACTaGTCTCCGCAAAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RSFDLLPWGNPRRPPLLLAAGCH*SPQRTG
Trigger: ACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGC...CAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCGCCCAACACGCCCTTaGCAGTGTTGTAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRRPTRP*QCCNPP
Trigger: AGGCGGATTACAACACTGCCAAGGGCGTGTTGGGCG...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAAATGCTGGCGACATCCTaGCCAGCAGCCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKMLATS*PAARRE
Trigger: CTCCCTCCTGGCTGCTGGCCAGGATGTCGCCAGCAT...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp ATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGGGCACGTCCAGGAGCTaGGCCCATCTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: IILMLQDASCAPWSSDIRGTSRS*AHLHCR
Trigger: CCTGCAGTGGAGATGGGCTCAGCTCCTGGACGTGCC...CCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR TCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGCCCACCAAAGGGGATaGAGGGCAGGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPAHQRG*RAGCQW
Trigger: CCACTGGCAGCCTGCCCTTCATCCCCTTTGGTGGGC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGCCCACCAAAGGGGATaGAGGGCAGGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEAHQRG*RAGCQW
Trigger: CCACTGGCAGCCTGCCCTTCATCCCCTTTGGTGGGC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCGCTCTGCAGCCCCAGTaGCAGCTGGCAGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSALQPQ*QLAGDG
Trigger: CCCATCACCTGCCAGCTGTCACTGGGGCTGCAGAGC...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACCTGGCAGTGGCCCCCTaGCCCAGCAGGTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VGIILMLQDASCAPWSSDLAVAP*PSRSSV
Trigger: CACAGATGACCTGCTGGGGCAGGGGGCCACTGCCAG...GTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCTCAAACTCCCTCACCTaGACCTCGCGGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPSNSLT*TSRGRR
Trigger: CCTGCGGCCCCGCGAGGTGCAGGTGAGGGAGTTTGA...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CCCAGCCATGGGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCCAGGCTGCCAGTGGCTaGATGGTACAAGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: PSHGHGGAVPEPREDRKVQAASG*MVQGHS
Trigger: GGAGTGACCTTGTACCATGCAGCCACTGGCAGCCTG...GACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCCCATGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGGCACCAGCTGGCTCTaGAGCCCCAGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEGTSWL*SPSDSW
Trigger: CCAGCTGTCACTGGGGCTGCAGAGCCAGCTGGTGCC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGGGGCCACACTGGTCTaGTTGTGCACGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPGATLV*LCTASW
Trigger: CCAGGAGGCCGTGCACAAGCAGACCAGTGTGGCCCC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCAGAGGGTCAGGGGGCTaGTTGCCGTCGTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPRGSGG*LPSCGR
Trigger: TCGCCCACACGACGGCAAGCAGCCCCCTGACCCTCT...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGATCCAGCAGGGCCCGTaGCAGCCGCAGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWIQQGP*QPQGLV
Trigger: TACCAGGCCCTGCGGCTGGCACGGGCCCTGCTGGAT...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCAGCCAGGCAGCGAAACATTAGCTCCTaGCCATCCAGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GMEEQYLSLEKIERSARQRNISS*PSSRAR
Trigger: ACGGGCCCTGCTGGATGGGCAGGAGCTAATGTTTCG...CTGCCTGGCTGACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGGAGGAGGGATGTCCTTaGCACTTCCAGAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRREEGCP*HFQSPS
Trigger: AGACGGACTCTGGAAGTGGCAAGGACATCCCTCCTC...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCGGGGATGCAGGCTTGTaGGACTGGGTGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAGDAGL*DWVTPP
Trigger: TGGGGGTGTCACCCAGTCCCACAAGCCTGCATCCCC...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGTCTCCTGCCCTGAGCTaGCTGGTCACCTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HSNASGCLMCPMELRHQESPALS*LVTFCP
Trigger: GGGGCAGAAGGTGACCAGCCAGCTCAGGGCAGGAGA...CTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCGTTCTCCCGCCTCTaGGCACCTGCAATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEPFSRL*APAMAP
Trigger: TGGGGCCATTGCAGGTGCCCAGAGGCGGGAGAACGG...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CCCAGCCATGGGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCCCTGCAGGTCCACTTTaGGGACGAACTTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: PSHGHGGAVPEPREDRKVPAGPL*GRTWGR
Trigger: ACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGG...GACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCCCATGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCCCAACCAGGCGCAGGTaGTTCCTGGTCTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAPTRRR*FLVSCT
Trigger: GGTGCACGAGACCAGGAACCACCTGCGCCTGGTTGG...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGCAGAGCTCTTGCATGTaGAGAAGCAGGTCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: RSFDLLPWGNPRRPPLLLQSSCM*RSRSFR
Trigger: ACGAAAGGACCTGCTTCTCCACATGCAAGAGCTCTG...CAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAAGGCTTGATGTCGCGATaGACAATGCCGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKGLMSR*TMPFSR
Trigger: GCGGGAGAACGGCATTGTGCATCGCGACATCAAGCC...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGGCACCAGCTGGCTCTaGAGCCCCAGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWGTSWL*SPSDSW
Trigger: CCAGCTGTCACTGGGGCTGCAGAGCCAGCTGGTGCC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCGGCACCAGCTGGCTCTaGAGCCCCAGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCGTSWL*SPSDSW
Trigger: CCAGCTGTCACTGGGGCTGCAGAGCCAGCTGGTGCC...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCCCCCAGCACTTGGCCTaGTCCACCTCCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAPQHLA*STSRML
Trigger: CAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGG...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGATCCAGCAGGGCCCGTaGCAGCCGCAGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMIQQGP*QPQGLV
Trigger: TACCAGGCCCTGCGGCTGGCACGGGCCCTGCTGGAT...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGCTCCCGGTTCAGGCTaGTCAGGCTCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEAPGSG*SGSPGS
Trigger: AGACCCAGGAGAGCCTGAGCAGCCTGAACCGGGAGC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAACCCTCGCAGAGCTCTTaGATGTGGAGAAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKPSQSS*MWRSRS
Trigger: GGACCTGCTTCTCCACATGCAAGAGCTCTGCGAGGG...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAACAGCCAGGCAGTTGCTaGCACACTCTTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKQPGSC*HTLSCG
Trigger: CCCACAGGAAAGAGTGTGGCAGCAACTGCCTGGCTG...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GGAGTGAAGTCCTATAAACCAGAGGGAGTGGGAAGGCGTATGAGAGCTTCTTCTTCTCCTGCCCTGAGCTaGCTGGTCACCTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GVKSYKPEGVGRRMRASSSPALS*LVTFCP
Trigger: GGGGCAGAAGGTGACCAGCCAGCTCAGGGCAGGAGA...AGAAGAAGCTCTCATACGCCTTCCCACTCCCTCTGGTTTATAGGACTTCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGTGTACACACTGGCAGTaGCCCCCTGCCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMECTHWQ*PPAPAG
Trigger: ACCTGCTGGGGCAGGGGGCCACTGCCAGTGTGTACA...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR CCA 90 bp ATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGATGGGCACCAGCTaGCTCTGCAGCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IILMLQDASCAPWSSDIRRMGTS*LCSPSD
Trigger: GTCACTGGGGCTGCAGAGCCAGCTGGTGCCCATCCT...CCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGCGCCCAACACGCCCTTaGCAGTGTTGTAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: SNASGCLMCPMELRHQEVRPTRP*QCCNPP
Trigger: AGGCGGATTACAACACTGCCAAGGGCGTGTTGGGCG...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCTGCTCAGGCTCTCCTaGGTCTCCGTGATATTTTGG +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRLLRLS*VSVIFW
Trigger: CCAAAATATCACGGAGACCCAGGAGAGCCTGAGCAG...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGGCGCAGGTGGTTCCTaGTCTCGTGCACCACCCTCA +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPGAGGS*SRAPPS
Trigger: TGAGGGTGGTGCACGAGACCAGGAACCACCTGCGCC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGGCGCAGGTGGTTCCTaGTCTCGTGCACCACCCTCA +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEGAGGS*SRAPPS
Trigger: TGAGGGTGGTGCACGAGACCAGGAACCACCTGCGCC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCAACCAGGCGCAGGTaGTTCCTGGTCTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEPTRRR*FLVSCT
Trigger: GGTGCACGAGACCAGGAACCACCTGCGCCTGGTTGG...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGCACGTCCAGGAGCTaGGCCCATCTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASGTSRS*AHLHCR
Trigger: CCTGCAGTGGAGATGGGCTCAGCTCCTGGACGTGCC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGCCCACCAAAGGGGATaGAGGGCAGGCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQAHQRG*RAGCQW
Trigger: CCACTGGCAGCCTGCCCTTCATCCCCTTTGGTGGGC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCTTCCAGCCACGCTGCTaGACCTCTCAGTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPFQPRC*TSQFPG
Trigger: GCCTGGGAACTGAGAGGTTCAGCAGCGTGGCTGGAA...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATCAAACTCCCTCACCTaGACCTCGCGGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASSNSLT*TSRGRR
Trigger: CCTGCGGCCCCGCGAGGTGCAGGTGAGGGAGTTTGA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp ATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGATCACCAGTACCTTCTaGCGGCTTCCGCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IILMLQDASCAPWSSDIRITSTF*RLPPVS
Trigger: GGAGACGGGCGGAAGCCGGCAGAAGGTACTGGTGAT...CCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGATCACCAGTACCTTCTaGCGGCTTCCGCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEITSTF*RLPPVS
Trigger: GGAGACGGGCGGAAGCCGGCAGAAGGTACTGGTGAT...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGCAGTTGCAATGTCTGTaGCACCCCAGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRQLQCL*HPRSWD
Trigger: GTCCCAGCTCCTGGGGTGGCACAGACATTGCAACTG...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCCCGCAGGTGGTTCATaGCGGCCACCACACAGCGCA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLPAGGS*RPPHSA
Trigger: TGCGCTGTGTGGTGGCCGGCATGAACCACCTGCGGG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCCCGCAGGTGGTTCATaGCGGCCACCACACAGCGCA +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCPAGGS*RPPHSA
Trigger: TGCGCTGTGTGGTGGCCGGCATGAACCACCTGCGGG...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCTGTCGCGATGCACAATaGCGTTCTCCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPACRDAQ*RSPAGG
Trigger: ACCACCTGCGGGAGAACGGCATTGTGCATCGCGACA...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGGGGCCACACTGGTCTaGTTGTGCACGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQGATLV*LCTASW
Trigger: CCAGGAGGCCGTGCACAAGCAGACCAGTGTGGCCCC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGTCGTGTGGGCGATGTaGTGTGCTGAGACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWVVWAM*CAETLG
Trigger: GCCCAGCGTCTCAGCACAGCACATCGCCCACACGAC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCGGTCAGGGGGCTGCTTaGCGTCGTGTGGGCGATGTG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCGQGAA*RRVGDV
Trigger: CACATCGCCCACACGACGGCAAGCAGCCCCCTGACC...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGGTCAGGGGGCTGCTTaGCGTCGTGTGGGCGATGTG +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMGQGAA*RRVGDV
Trigger: CACATCGCCCACACGACGGCAAGCAGCCCCCTGACC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGGTCAGGGGGCTGCTTaGCGTCGTGTGGGCGATGTG +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQGQGAA*RRVGDV
Trigger: CACATCGCCCACACGACGGCAAGCAGCCCCCTGACC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAAGAGGGTCAGGGGGCTaGTTGCCGTCGTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASRGSGG*LPSCGR
Trigger: TCGCCCACACGACGGCAAGCAGCCCCCTGACCCTCT...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGCGAAACATTAGCTCCTaGCCATCCAGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRRNISS*PSSRAR
Trigger: ACGGGCCCTGCTGGATGGGCAGGAGCTAATGTTTCG...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGCTTCCAGAGTCCGTCTaGATGTGGCCTGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRLPESV*MWPGAP
Trigger: AGGTGCTCCAGGCCACATGCAGACGGACTCTGGAAG...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCCTTCCAGAGTCCGTCTaGATGTGGCCTGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPALPESV*MWPGAP
Trigger: AGGTGCTCCAGGCCACATGCAGACGGACTCTGGAAG...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGCTCCCGGTTCAGGCTaGTCAGGCTCTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWAPGSG*SGSPGS
Trigger: AGACCCAGGAGAGCCTGAGCAGCCTGAACCGGGAGC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTCCAGGAGGTCAGATaGCAGCAGCTTCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: HSNASGCLMCPMELRHQEVQEVR*QQLHPL
Trigger: GAGGGGATGAAGCTGCTGGCATCTGACCTCCTGGAC...CTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCAGCCAGGCAGTCAGGATGCCTCATGTaGCCCATGGAGCTCAGACAT +
Preference number: 4 (lower is better)
Translates to: GMEEQYLSLEKIERSARQSGCLM*PMELRH
Trigger: ATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGA...CTGCCTGGCTGACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACCGTTCTCCCGCAGGTaGTTCATGCCGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: CWNHSNASGCLMCPMELRPFSRR*FMPATT
Trigger: TGTGGTGGCCGGCATGAACCACCTGCGGGAGAACGG...TCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGCCGAACGCTTTTTGCTaGGGCTTTCGAAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRPNAFC*GFRSTA
Trigger: GGCGGTGCTTCGAAAGCCCCAGCAAAAAGCGTTCGG...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCCCGAACGCTTTTTGCTaGGGCTTTCGAAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAPNAFC*GFRSTA
Trigger: GGCGGTGCTTCGAAAGCCCCAGCAAAAAGCGTTCGG...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGGATGTTGGCCAGGATaGGCACCAGCTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEGCWPG*APAGSA
Trigger: TGCAGAGCCAGCTGGTGCCCATCCTGGCCAACATCC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGGATGTTGGCCAGGATaGGCACCAGCTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPGCWPG*APAGSA
Trigger: TGCAGAGCCAGCTGGTGCCCATCCTGGCCAACATCC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAAGACAGGGAGAAGACATaGACGACAACTCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKDREKT*TTTRCR
Trigger: CCTGCAGCGAGTTGTCGTCCATGTCTTCTCCCTGTC...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCCTGCTTGCCGTCGTGTaGGCGATGTGCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPLLAVV*AMCCAE
Trigger: CTCAGCACAGCACATCGCCCACACGACGGCAAGCAG...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGGATGGGATCTTGCCCTaGGTTGGTCTCATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SNASGCLMCPMELRHQEVDGILP*VGLMVQ
Trigger: CTGCACCATGAGACCAACCCAGGGCAAGATCCCATC...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGTGGGGTAAGGAGCTATaGGAGGCGGCGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWWGKEL*EAARPE
Trigger: CTCAGGCCTCGCCGCCTCCCATAGCTCCTTACCCCA...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGCCTCCTTGTGGCGGTaGGACACCAAGCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEASLWR*DTKLST
Trigger: AGTGCTGAGCTTGGTGTCCCACCGCCACAAGGAGGC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCACCCACGGCCCAGCCATaGGCATGGAGGAGCAGTACC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASPTAQP*AWRSST
Trigger: GGTACTGCTCCTCCATGCCCATGGCTGGGCCGTGGG...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGTTCCAGCCACGCTGCTaGACCTCTCAGTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWFQPRC*TSQFPG
Trigger: GCCTGGGAACTGAGAGGTTCAGCAGCGTGGCTGGAA...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTGTCCTCATGTACCTaGTCCCGGCTCTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMELSSCT*SRLFTS
Trigger: GCTGGTGAAGAGCCGGGATCAGGTACATGAGGACAG...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCTTGCATGCTTGCTaGGACTCTCCTGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMELLHAC*DSPGPP
Trigger: AGGGGGTCCAGGAGAGTCTCAGCAAGCATGCAAGAG...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR TCA 90 bp AGGAAGACTGTGATGAGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGTATTTAGCCGTTCGATaGTGCGGTTGTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RKTVMRSFDLLPWGNPRRYLAVR*CGCCPG
Trigger: TCCTGGACAACAACCGCATCATCGAACGGCTAAATA...CCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACAGTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGGAGGTAGGCTGATGTaGTGGGATGGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPGGRLM*WDGILP
Trigger: GGGCAAGATCCCATCCCATCACATCAGCCTACCTCC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGCCCCACACTCTGAGCTaGCCTGAGTCAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQPHTLS*PESGKG
Trigger: GCCTTTGCCTGACTCAGGGCAGCTCAGAGTGTGGGG...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGCCCCACACTCTGAGCTaGCCTGAGTCAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWPHTLS*PESGKG
Trigger: GCCTTTGCCTGACTCAGGGCAGCTCAGAGTGTGGGG...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATTCAAACTCCCTCACCTaGACCTCGCGGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDSNSLT*TSRGRR
Trigger: CCTGCGGCCCCGCGAGGTGCAGGTGAGGGAGTTTGA...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGATCACCAGTACCTTCTaGCGGCTTCCGCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMITSTF*RLPPVS
Trigger: GGAGACGGGCGGAAGCCGGCAGAAGGTACTGGTGAT...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCAGTTGCAATGTCTGTaGCACCCCAGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSQLQCL*HPRSWD
Trigger: GTCCCAGCTCCTGGGGTGGCACAGACATTGCAACTG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCCCGCAGGTGGTTCATaGCGGCCACCACACAGCGCA +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDPAGGS*RPPHSA
Trigger: TGCGCTGTGTGGTGGCCGGCATGAACCACCTGCGGG...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCCAGGCTGCCAGTGGCTaGATGGTACAAGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPQAASG*MVQGHS
Trigger: GGAGTGACCTTGTACCATGCAGCCACTGGCAGCCTG...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTCGTGTGGGCGATGTaGTGTGCTGAGACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASVVWAM*CAETLG
Trigger: GCCCAGCGTCTCAGCACAGCACATCGCCCACACGAC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCCTTCCAGAGTCCGTCTaGATGTGGCCTGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPLPESV*MWPGAP
Trigger: AGGTGCTCCAGGCCACATGCAGACGGACTCTGGAAG...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGTCCCACACTCTGAGCTaGCCTGAGTCAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMESHTLS*PESGKG
Trigger: GCCTTTGCCTGACTCAGGGCAGCTCAGAGTGTGGGA...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCGGCCTGAGCCCCCTTTaGTCGGTCCTGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCGLSPL*SVLKEL
Trigger: CAGCTCCTTCAGGACCGAGCAAAGGGGGCTCAGGCC...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGCCTGAGCCCCCTTTaGTCGGTCCTGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASGLSPL*SVLKEL
Trigger: CAGCTCCTTCAGGACCGAGCAAAGGGGGCTCAGGCC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGACAGAGGTGGCCTGGTaGCCAGTCTCAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMTEVAW*PVSAVL
Trigger: CAGCACAGCTGAGACTGGGCACCAGGCCACCTCTGT...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGCAGGCTTGTGGGACTaGGTGACACCCCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQAGLWD*VTPPEL
Trigger: AAGCTCTGGGGGTGTCACCCAGTCCCACAAGCCTGC...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGGGGATGCAGGCTTGTaGGACTGGGTGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMGDAGL*DWVTPP
Trigger: TGGGGGTGTCACCCAGTCCCACAAGCCTGCATCCCC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTGTACACACTGGCAGTaGCCCCCTGCCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQCTHWQ*PPAPAG
Trigger: ACCTGCTGGGGCAGGGGGCCACTGCCAGTGTGTACA...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR CCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGCCGTTCTCCCGCAGGTaGTTCATGCCGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQPFSRR*FMPATT
Trigger: TGTGGTGGCCGGCATGAACCACCTGCGGGAGAACGG...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACAGGGCAGGCTGCCAGTaGCTGCATGGTACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGIILMLQDASCAPWSSDRAGCQ*LHGTRS
Trigger: TGACCTTGTACCATGCAGCCACTGGCAGCCTGCCCT...GTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCTCCTTGTTCCGCCGTaGCCCACCAAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSLLVPP*PTKGDE
Trigger: TTCATCCCCTTTGGTGGGCCACGGCGGAACAAGGAG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGAGTGAAGTCCTATAAACCAGAGGGAGTGGGAAGGCGTATGAGAGCTTCTTCTCTCCTTGTTCCGCCGTaGCCCACCAAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: GVKSYKPEGVGRRMRASSLLVPP*PTKGDE
Trigger: TTCATCCCCTTTGGTGGGCCACGGCGGAACAAGGAG...AGAAGAAGCTCTCATACGCCTTCCCACTCCCTCTGGTTTATAGGACTTCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGAGGATGGGCACCAGCTaGCTCTGCAGCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQRMGTS*LCSPSD
Trigger: GTCACTGGGGCTGCAGAGCCAGCTGGTGCCCATCCT...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGAGGATGGGCACCAGCTaGCTCTGCAGCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMRMGTS*LCSPSD
Trigger: GTCACTGGGGCTGCAGAGCCAGCTGGTGCCCATCCT...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGGATGTTGGCCAGGATaGGCACCAGCTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWGCWPG*APAGSA
Trigger: TGCAGAGCCAGCTGGTGCCCATCCTGGCCAACATCC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp ATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGTGGTGCAGGACTGCCTaGGACAGGGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: IILMLQDASCAPWSSDIRWCRTA*DREKTW
Trigger: CCATGTCTTCTCCCTGTCCCAGGCAGTCCTGCACCA...CCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGTGGTGCAGGACTGCCTaGGACAGGGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEWCRTA*DREKTW
Trigger: CCATGTCTTCTCCCTGTCCCAGGCAGTCCTGCACCA...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCAGCCAGGCAGTTGTGCACGGCCTCCTaGAAAATGGCTATCGTGTTG +
Preference number: 4 (lower is better)
Translates to: GMEEQYLSLEKIERSARQLCTAS*KMAIVL
Trigger: CAACACGATAGCCATTTTCCAGGAGGCCGTGCACAA...CTGCCTGGCTGACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCGCCCAACACGCCCTTaGCAGTGTTGTAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSRPTRP*QCCNPP
Trigger: AGGCGGATTACAACACTGCCAAGGGCGTGTTGGGCG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCGTCTGCATGTGGCCTaGAGCACCTCCATGACCCAG +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCRLHVA*STSMTQ
Trigger: CTGGGTCATGGAGGTGCTCCAGGCCACATGCAGACG...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGCCGCCTTCAGTTCCTaGATCTCAGGCGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWAAFSS*ISGVPA
Trigger: GGCTGGAACGCCTGAGATCCAGGAACTGAAGGCGGC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CCCAGCCATGGGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCGTCTCCGTGATATTTTaGGAGCATCTGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: PSHGHGGAVPEPREDRKVVSVIF*EHLERT
Trigger: GGTCCTCTCCAGATGCTCCCAAAATATCACGGAGAC...GACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCCCATGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGCTGCTCAGGCTCTCCTaGGTCTCCGTGATATTTTGG +
Preference number: 4 (lower is better)
Translates to: SNASGCLMCPMELRHQEVLLRLS*VSVIFW
Trigger: CCAAAATATCACGGAGACCCAGGAGAGCCTGAGCAG...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp CCCAGCCATGGGCATGGAGGAGCAGTACCTGAGCCTAGAGAAGATAGAAAGGTCGTTGTAGCCAAGCCCTaGCCTCATCCTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: PSHGHGGAVPEPREDRKVVVAKP*PHPRLL
Trigger: AAGAAGTCTAGGATGAGGCCAGGGCTTGGCTACAAC...GACCTTTCTATCTTCTCTAGGCTCAGGTACTGCTCCTCCATGCCCATGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCACCAACCAGGCGCAGGTaGTTCCTGGTCTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASPTRRR*FLVSCT
Trigger: GGTGCACGAGACCAGGAACCACCTGCGCCTGGTTGG...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTTGCTGAGACTCTCCTaGACCCCCTGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSLLRLS*TPWASV
Trigger: CACAGAAGCCCAGGGGGTCCAGGAGAGTCTCAGCAA...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAACAGGGAGAAAGGCAGTaGAAGGTAATGCTGGCGACA +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKQGERQ*KVMLAT
Trigger: TGTCGCCAGCATTACCTTCCACTGCCTTTCTCCCTG...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGGGTCCCAACAGAGGTaGCCTGGTGCCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQGSQQR*PGAQSQ
Trigger: CTGAGACTGGGCACCAGGCCACCTCTGTTGGGACCC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCCACACTCTTTCCTGTaGGTCCCAACAGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSPHSFL*VPTEVA
Trigger: GGCCACCTCTGTTGGGACCCACAGGAAAGAGTGTGG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTTTGACCTACTGCCCTaGGGAAACCCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSFDLLP*GNPRRP
Trigger: AGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAA...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTTCCAGCCACGCTGCTaGACCTCTCAGTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLFQPRC*TSQFPG
Trigger: GCCTGGGAACTGAGAGGTTCAGCAGCGTGGCTGGAA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGCTGTCCTCATGTACCTaGTCCCGGCTCTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQLSSCT*SRLFTS
Trigger: GCTGGTGAAGAGCCGGGATCAGGTACATGAGGACAG...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR TCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGCTGTCCTCATGTACCTaGTCCCGGCTCTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMLSSCT*SRLFTS
Trigger: GCTGGTGAAGAGCCGGGATCAGGTACATGAGGACAG...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGGTGACTAAGGACGCTTaGTACTTCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRVTKDA*YFCTHS
Trigger: GGAGTGCGTGCAGAAGTATCAAGCGTCCTTAGTCAC...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR TCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCAGGAGGGAGGTAGGCTaGTGTGATGGGATGGGATCT +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPRREVG*CDGMGS
Trigger: AGATCCCATCCCATCACATCAGCCTACCTCCCTCCT...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTGCTCTGCATCTCCTaGCCTGAGCTGGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASVLCIS*PELAGH
Trigger: GTGACCAGCCAGCTCAGGGCAGGAGATGCAGAGCAC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCACAGGCAGGGCCAGTTaGAATGTCTGTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCTGRAS*NVCATP
Trigger: TGGGGTGGCACAGACATTGCAACTGGCCCTGCCTGT...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGATGTCGCGATGCACAATaGCGTTCTCCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CWNHSNASGCLMCPMELRCRDAQ*RSPAGG
Trigger: ACCACCTGCGGGAGAACGGCATTGTGCATCGCGACA...TCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGGCTTGATGTCGCGATaGACAATGCCGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQGLMSR*TMPFSR
Trigger: GCGGGAGAACGGCATTGTGCATCGCGACATCAAGCC...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGGCTTGATGTCGCGATaGACAATGCCGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWGLMSR*TMPFSR
Trigger: GCGGGAGAACGGCATTGTGCATCGCGACATCAAGCC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACCTGTCAGCTTGTAGATaGTCTGCCCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: VGIILMLQDASCAPWSSDLSACR*SAPPPL
Trigger: TAGGGGAGGAGGGGCAGAGCATCTACAAGCTGACAG...GTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTGTCAGCTTGTAGATaGTCTGCCCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMELSACR*SAPPPL
Trigger: TAGGGGAGGAGGGGCAGAGCATCTACAAGCTGACAG...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCTGTCAGCTTGTAGATaGTCTGCCCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSLSACR*SAPPPL
Trigger: TAGGGGAGGAGGGGCAGAGCATCTACAAGCTGACAG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCCCCAGCACTTGGCCTaGTCCACCTCCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCPQHLA*STSRML
Trigger: CAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGG...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGATGTGGTGCAGGACTaGCTGGGACAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWDVVQD*LGQGED
Trigger: GTCTTCTCCCTGTCCCAGGCAGTCCTGCACCACATC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCACCTCCATGACCCAGTaGAGCCCCCGAAACATTAGC +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSTSMTQ*SPRNIS
Trigger: GCTAATGTTTCGGGGGCTGCACTGGGTCATGGAGGT...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACTGGTTCCTGGTCTCGTaGACCACCCTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VGIILMLQDASCAPWSSDWFLVS*TTLILL
Trigger: CAAGAGGATGAGGGTGGTGCACGAGACCAGGAACCA...GTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACCCCTCGCAGAGCTCTTaGATGCTTGCTGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: VGIILMLQDASCAPWSSDPSQSS*MLAETL
Trigger: GAGAGTCTCAGCAAGCATGCAAGAGCTCTGCGAGGG...GTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCGTCCAGGAGGTCAGATaGCAGCAGCTTCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCVQEVR*QQLHPL
Trigger: GAGGGGATGAAGCTGCTGGCATCTGACCTCCTGGAC...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCGATGGGATGGGATCTTaGCCTGGGTTGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSDGMGS*PGLVSW
Trigger: CCATGAGACCAACCCAGGGCAAGATCCCATCCCATC...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGCCCTCGCAGAGCTCTTaGATGTGGAGAAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWPSQSS*MWRSRS
Trigger: GGACCTGCTTCTCCACATGCAAGAGCTCTGCGAGGG...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATGCAGGCCTTGGACCTaGCCAGACTCACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASCRPWT*PDSQSW
Trigger: CCAGGACTGTGAGTCTGGGCAGGTCCAAGGCCTGCA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGCAGGCTTGTGGGACTaGGTGACACCCCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMAGLWD*VTPPEL
Trigger: AAGCTCTGGGGGTGTCACCCAGTCCCACAAGCCTGC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGCAGGCTTGTGGGACTaGGTGACACCCCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLAGLWD*VTPPEL
Trigger: AAGCTCTGGGGGTGTCACCCAGTCCCACAAGCCTGC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCCGTTCTCCCGCAGGTaGTTCATGCCGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDPFSRR*FMPATT
Trigger: TGTGGTGGCCGGCATGAACCACCTGCGGGAGAACGG...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGTCTCCGCAAAGAACTaGTCGAAGCCCCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEVSAKN*SKPQHL
Trigger: CAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGAC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGTCTCCGCAAAGAACTaGTCGAAGCCCCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPVSAKN*SKPQHL
Trigger: CAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGAC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGTGGTGCAGGACTGCCTaGGACAGGGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWWCRTA*DREKTW
Trigger: CCATGTCTTCTCCCTGTCCCAGGCAGTCCTGCACCA...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCTGCTTGCCGTCGTGTaGGCGATGTGCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLLAVV*AMCCAE
Trigger: CTCAGCACAGCACATCGCCCACACGACGGCAAGCAG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTGCTTGCCGTCGTGTaGGCGATGTGCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCLLAVV*AMCCAE
Trigger: CTCAGCACAGCACATCGCCCACACGACGGCAAGCAG...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCTTTGGGGACGAACTTaGGGACGTCCAGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCLWGRT*GRPEQG
Trigger: ACCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAG...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGCTTTGGGGACGAACTTaGGGACGTCCAGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMLWGRT*GRPEQG
Trigger: ACCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAG...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGCCTGCAGGTCCACTTTaGGGACGAACTTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMPAGPL*GRTWGR
Trigger: ACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGG...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGCGTCTGCATGTGGCCTaGAGCACCTCCATGACCCAG +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMRLHVA*STSMTQ
Trigger: CTGGGTCATGGAGGTGCTCCAGGCCACATGCAGACG...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCACGTCTGCATGTGGCCTaGAGCACCTCCATGACCCAG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASRLHVA*STSMTQ
Trigger: CTGGGTCATGGAGGTGCTCCAGGCCACATGCAGACG...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGCCGCCTTCAGTTCCTaGATCTCAGGCGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLAAFSS*ISGVPA
Trigger: GGCTGGAACGCCTGAGATCCAGGAACTGAAGGCGGC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAATATTTTGGGAGCATCTaGAGAGGACCTCCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKYFGSI*RGPPLE
Trigger: CTCTAGCGGAGGTCCTCTCCAGATGCTCCCAAAATA...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTGCACGCACTCCTCCTaGAACACCTGCAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSCTHSS*NTCRSL
Trigger: AAGACTCCTGCAGGTGTTCCAGGAGGAGTGCGTGCA...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGCTCTCCTGGACCCCCTaGGCTTCTGTGTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMLSWTP*ASVLQA
Trigger: TGCCTGTAACACAGAAGCCCAGGGGGTCCAGGAGAG...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCGATGGGATCTTGCCCTaGGTTGGTCTCATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSDGILP*VGLMVQ
Trigger: CTGCACCATGAGACCAACCCAGGGCAAGATCCCATC...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTTCCCTGCCTCCTTGTaGCGGTGGGACACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLFPASL*RWDTKL
Trigger: GAGCTTGGTGTCCCACCGCCACAAGGAGGCAGGGAA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGCCAACAGAGGTGGCCTaGTGCCCAGTCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQPTEVA*CPVSAV
Trigger: CACAGCTGAGACTGGGCACCAGGCCACCTCTGTTGG...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGTCGAGGACACAGAGGTaGCCCTCAAAGAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMSRTQR*PSKRYS
Trigger: GGAGTACCTCTTTGAGGGTCACCTCTGTGTCCTCGA...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTCGAGGACACAGAGGTaGCCCTCAAAGAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCSRTQR*PSKRYS
Trigger: GGAGTACCTCTTTGAGGGTCACCTCTGTGTCCTCGA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGGAGGTAGGCTGATGTaGTGGGATGGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLGGRLM*WDGILP
Trigger: GGGCAAGATCCCATCCCATCACATCAGCCTACCTCC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGAGTGGGAAGGCGTATaGGAGCTTCTTCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASEWEGV*ELLLPT
Trigger: CGTGGGGAGAAGAAGCTCTCATACGCCTTCCCACTC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCCGGATTTCTTGTTaGGGGCCTTGTACACACTGG +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMELRISC*GPCTHW
Trigger: CCAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAG...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR GCA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGACAAGGTCACTCCAATaGTCCAGAGATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SNASGCLMCPMELRHQEVTRSLQ*SRDPQS
Trigger: TGACTGTGGATCTCTGGAGCATTGGAGTGACCTTGT...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCAGGCTGCCAGTGGCTaGATGGTACAAGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCQAASG*MVQGHS
Trigger: GGAGTGACCTTGTACCATGCAGCCACTGGCAGCCTG...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCCCCAGCACTTGGCCTaGTCCACCTCCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDPQHLA*STSRML
Trigger: CAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGG...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGTGGACGACAACTCGCTaGAGGATGTCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQWTTTR*RMSLVS
Trigger: GGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCA...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGTGGACGACAACTCGCTaGAGGATGTCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWWTTTR*RMSLVS
Trigger: GGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCA...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCGATGTGGTGCAGGACTaGCTGGGACAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCDVVQD*LGQGED
Trigger: GTCTTCTCCCTGTCCCAGGCAGTCCTGCACCACATC...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGATGTGGTGCAGGACTaGCTGGGACAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASDVVQD*LGQGED
Trigger: GTCTTCTCCCTGTCCCAGGCAGTCCTGCACCACATC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGAGTGAAGTCCTATAAACCAGAGGGAGTGGGAAGGCGTATGAGAGCTTCTTCTACACTGGTCTGCTTGTaGACGGCCTCCTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: GVKSYKPEGVGRRMRASSTLVCL*TASWKM
Trigger: CATTTTCCAGGAGGCCGTGCACAAGCAGACCAGTGT...AGAAGAAGCTCTCATACGCCTTCCCACTCCCTCTGGTTTATAGGACTTCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCACACTGGTCTGCTTGTaGACGGCCTCCTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSTLVCL*TASWKM
Trigger: CATTTTCCAGGAGGCCGTGCACAAGCAGACCAGTGT...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCACGAAACATTAGCTCCTaGCCATCCAGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASRNISS*PSSRAR
Trigger: ACGGGCCCTGCTGGATGGGCAGGAGCTAATGTTTCG...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCACCTCCATGACCCAGTaGAGCCCCCGAAACATTAGC +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCTSMTQ*SPRNIS
Trigger: GCTAATGTTTCGGGGGCTGCACTGGGTCATGGAGGT...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTGGTTCCTGGTCTCGTaGACCACCCTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCWFLVS*TTLILL
Trigger: CAAGAGGATGAGGGTGGTGCACGAGACCAGGAACCA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGTCCAGGAGGTCAGATaGCAGCAGCTTCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQVQEVR*QQLHPL
Trigger: GAGGGGATGAAGCTGCTGGCATCTGACCTCCTGGAC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGTCAGGATGCCTCATGTaGCCCATGGAGCTCAGACAT +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMESGCLM*PMELRH
Trigger: ATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGA...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCTCTAATGCTTCAGGATaGCTCATGTGCCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPASNASG*LMCPME
Trigger: CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGATGGGATGGGATCTTaGCCTGGGTTGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWDGMGS*PGLVSW
Trigger: CCATGAGACCAACCCAGGGCAAGATCCCATCCCATC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGGTCGTTTGACCTACTaGCCTGGGGAAACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLGRLTY*PGETPG
Trigger: TCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGTCAGCAGGCTCCCACTaGAGCAGTACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMSAGSH*SSTPSP
Trigger: TGGTGATGGAGTACTGCTCCAGTGGGAGCCTGCTGA...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTCAGCAGGCTCCCACTaGAGCAGTACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCSAGSH*SSTPSP
Trigger: TGGTGATGGAGTACTGCTCCAGTGGGAGCCTGCTGA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGCCGAACGCTTTTTGCTaGGGCTTTCGAAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMPNAFC*GFRSTA
Trigger: GGCGGTGCTTCGAAAGCCCCAGCAAAAAGCGTTCGG...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCAGGGCAGGCTGCCAGTaGCTGCATGGTACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCRAGCQ*LHGTRS
Trigger: TGACCTTGTACCATGCAGCCACTGGCAGCCTGCCCT...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCAGGGCAGGCTGCCAGTaGCTGCATGGTACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLRAGCQ*LHGTRS
Trigger: TGACCTTGTACCATGCAGCCACTGGCAGCCTGCCCT...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCTCCTTGTTCCGCCGTaGCCCACCAAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLLVPP*PTKGDE
Trigger: TTCATCCCCTTTGGTGGGCCACGGCGGAACAAGGAG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGCTGCAGGATGTCACTaGTCTCCGCAAAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEAAGCH*SPQRTG
Trigger: ACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCGGCCTCCTGGAAAATaGCTATCGTGTTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSRPPGK*LSCCGH
Trigger: ATGCCCACAACACGATAGCCATTTTCCAGGAGGCCG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCTTTGGGGACGAACTTaGGGACGTCCAGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLWGRT*GRPEQG
Trigger: ACCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCCTGCAGGTCCACTTTaGGGACGAACTTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLPAGPL*GRTWGR
Trigger: ACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCGCCTTCAGTTCCTaGATCTCAGGCGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDAAFSS*ISGVPA
Trigger: GGCTGGAACGCCTGAGATCCAGGAACTGAAGGCGGC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGGTCTCCGTGATATTTTaGGAGCATCTGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRVSVIF*EHLERT
Trigger: GGTCCTCTCCAGATGCTCCCAAAATATCACGGAGAC...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp CATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTTGTAGCCAAGCCCTaGCCTCATCCTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: HSNASGCLMCPMELRHQEVVAKP*PHPRLL
Trigger: AAGAAGTCTAGGATGAGGCCAGGGCTTGGCTACAAC...CTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGTGCACGCACTCCTCCTaGAACACCTGCAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWCTHSS*NTCRSL
Trigger: AAGACTCCTGCAGGTGTTCCAGGAGGAGTGCGTGCA...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCTCTCCTGGACCCCCTaGGCTTCTGTGTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLSWTP*ASVLQA
Trigger: TGCCTGTAACACAGAAGCCCAGGGGGTCCAGGAGAG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCACTCTCCTGGACCCCCTaGGCTTCTGTGTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASLSWTP*ASVLQA
Trigger: TGCCTGTAACACAGAAGCCCAGGGGGTCCAGGAGAG...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCTTGCTGAGACTCTCCTaGACCCCCTGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCLLRLS*TPWASV
Trigger: CACAGAAGCCCAGGGGGTCCAGGAGAGTCTCAGCAA...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTTGCTGAGACTCTCCTaGACCCCCTGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLLRLS*TPWASV
Trigger: CACAGAAGCCCAGGGGGTCCAGGAGAGTCTCAGCAA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCGCCTCATGTGCCCCATaGAGCTCAGACATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCASCAP*SSDIRR
Trigger: CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGC...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGATGGGATCTTGCCCTaGGTTGGTCTCATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMDGILP*VGLMVQ
Trigger: CTGCACCATGAGACCAACCCAGGGCAAGATCCCATC...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGCTGATGTGATGGGATaGGATCTTGCCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWADVMG*DLALGW
Trigger: CCAACCCAGGGCAAGATCCCATCCCATCACATCAGC...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGCTGATGTGATGGGATaGGATCTTGCCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMADVMG*DLALGW
Trigger: CCAACCCAGGGCAAGATCCCATCCCATCACATCAGC...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGCTCACTGTCATTCATaGGCAGTGTTCTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPAHCHS*AVFLAS
Trigger: GGAGGCTAAGAACACTGCTCATGAATGACAGTGAGC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGATCTCCTGGGTCTCCGTaGTATTTTGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: CWNHSNASGCLMCPMELRSPGSP*YFGSIW
Trigger: CCAGATGCTCCCAAAATATCACGGAGACCCAGGAGA...TCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR TCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTCTCCTGGGTCTCCGTaGTATTTTGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCSPGSP*YFGSIW
Trigger: CCAGATGCTCCCAAAATATCACGGAGACCCAGGAGA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGGAGGTAGGCTGATGTaGTGGGATGGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDGGRLM*WDGILP
Trigger: GGGCAAGATCCCATCCCATCACATCAGCCTACCTCC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGAGGAGGGAGGTAGGCTaGTGTGATGGGATGGGATCT +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMRREVG*CDGMGS
Trigger: AGATCCCATCCCATCACATCAGCCTACCTCCCTCCT...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCAGGAGGGAGGTAGGCTaGTGTGATGGGATGGGATCT +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCRREVG*CDGMGS
Trigger: AGATCCCATCCCATCACATCAGCCTACCTCCCTCCT...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATTGTCGCGATGCACAATaGCGTTCTCCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDCRDAQ*RSPAGG
Trigger: ACCACCTGCGGGAGAACGGCATTGTGCATCGCGACA...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGACACTGGTCTGCTTGTaGACGGCCTCCTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQTLVCL*TASWKM
Trigger: CATTTTCCAGGAGGCCGTGCACAAGCAGACCAGTGT...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGACCTCCATGACCCAGTaGAGCCCCCGAAACATTAGC +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQTSMTQ*SPRNIS
Trigger: GCTAATGTTTCGGGGGCTGCACTGGGTCATGGAGGT...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGAGGAGGGATGTCCTTaGCACTTCCAGAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASEEGCP*HFQSPS
Trigger: AGACGGACTCTGGAAGTGGCAAGGACATCCCTCCTC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTCCTCCTGGAACACCTaGAGGAGTCTTTTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRSSWNT*RSLLAK
Trigger: TTTAGCCAAAAGACTCCTGCAGGTGTTCCAGGAGGA...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATGGTTCCTGGTCTCGTaGACCACCCTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASWFLVS*TTLILL
Trigger: CAAGAGGATGAGGGTGGTGCACGAGACCAGGAACCA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATACTCACAGTCCTGGCTaGATGTCCCAGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDTHSPG*MSQDQL
Trigger: CAGCTGGTCCTGGGACATGCAGCCAGGACTGTGAGT...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGTATGCTTTCTGTCTGTaGCACGTCCAGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQYAFCL*HVQELS
Trigger: GCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATA...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTATGCTTTCTGTCTGTaGCACGTCCAGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCYAFCL*HVQELS
Trigger: GCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGGCAAAGGCTCTTCCTaGCGAGTGTATGTTATGCTT +
Preference number: 4 (lower is better)
Translates to: HSNASGCLMCPMELRHQEGKGSS*RVYVML
Trigger: AAGCATAACATACACTCGCCAGGAAGAGCCTTTGCC...CTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGAGCTTGACAATGTTCTaGTGGTTCAGCTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMESLTMF*WFSFRR
Trigger: CCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCT...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGAGTGAAGTCCTATAAACCAGAGGGAGTGGGAAGGCGTATGAGAGCTTCTTCTAGCTTGACAATGTTCTaGTGGTTCAGCTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GVKSYKPEGVGRRMRASSSLTMF*WFSFRR
Trigger: CCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCT...AGAAGAAGCTCTCATACGCCTTCCCACTCCCTCTGGTTTATAGGACTTCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTCAGCAGGCTCCCACTaGAGCAGTACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMSAGSH*SSTPSP
Trigger: TGGTGATGGAGTACTGCTCCAGTGGGAGCCTGCTGA...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCTGCCAGTGGCTGCATaGTACAAGGTCACTCCAATG +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCLPVAA*YKVTPM
Trigger: CATTGGAGTGACCTTGTACCATGCAGCCACTGGCAG...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGTCTCCGCAAAGAACTaGTCGAAGCCCCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMVSAKN*SKPQHL
Trigger: CAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGAC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGCTGCAGGATGTCACTaGTCTCCGCAAAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMAAGCH*SPQRTG
Trigger: ACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGC...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGACAGGGAGAAGACATaGACGACAACTCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLDREKT*TTTRCR
Trigger: CCTGCAGCGAGTTGTCGTCCATGTCTTCTCCCTGTC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGCGGCCTCCTGGAAAATaGCTATCGTGTTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMRPPGK*LSCCGH
Trigger: ATGCCCACAACACGATAGCCATTTTCCAGGAGGCCG...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCTTGTGCACGGCCTCCTaGAAAATGGCTATCGTGTTG +
Preference number: 4 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPLCTAS*KMAIVL
Trigger: CAACACGATAGCCATTTTCCAGGAGGCCGTGCACAA...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTGCACGCACTCCTCCTaGAACACCTGCAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLCTHSS*NTCRSL
Trigger: AAGACTCCTGCAGGTGTTCCAGGAGGAGTGCGTGCA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATaGAGCTCAGACATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDASCAP*SSDIRR
Trigger: CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGCTGATGTGATGGGATaGGATCTTGCCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASADVMG*DLALGW
Trigger: CCAACCCAGGGCAAGATCCCATCCCATCACATCAGC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGGCCTCCTCTCCTGTTaGCTAGGGAGTGAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLGLLSC*LGSEVL
Trigger: TAGGACTTCACTCCCTAGCCAACAGGAGAGGAGGCC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGCCAAGACACTGGCACTaGCCTTGGCCACCCATTTTC +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMPRHWH*PWPPIF
Trigger: GAAAATGGGTGGCCAAGGCCAGTGCCAGTGTCTTGG...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR TCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATTCGAGGACACAGAGGTaGCCCTCAAAGAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDSRTQR*PSKRYS
Trigger: GGAGTACCTCTTTGAGGGTCACCTCTGTGTCCTCGA...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCTCTCCTGGGTCTCCGTaGTATTTTGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCSPGSP*YFGSIW
Trigger: CCAGATGCTCCCAAAATATCACGGAGACCCAGGAGA...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGTGACTAAGGACGCTTaGTACTTCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQVTKDA*YFCTHS
Trigger: GGAGTGCGTGCAGAAGTATCAAGCGTCCTTAGTCAC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTCCTCTTGCCGTGTGTaGCTAAGGACGCTTGATACT +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCSSCRV*LRTLDT
Trigger: AGTATCAAGCGTCCTTAGTCACACACGGCAAGAGGA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGTCCTCTTGCCGTGTGTaGCTAAGGACGCTTGATACT +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMSSCRV*LRTLDT
Trigger: AGTATCAAGCGTCCTTAGTCACACACGGCAAGAGGA...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTGTGATGAGGTCGTTTaGCCTACTGCCCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQCDEVV*PTALGK
Trigger: TTTCCCCAGGGCAGTAGGTCAAACGACCTCATCACA...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCTCCGGATTTCTTGTTaGGGGCCTTGTACACACTGG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLRISC*GPCTHW
Trigger: CCAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR GCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGACAAGGTCACTCCAATaGTCCAGAGATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMETRSLQ*SRDPQS
Trigger: TGACTGTGGATCTCTGGAGCATTGGAGTGACCTTGT...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGAGGAGGGATGTCCTTaGCACTTCCAGAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDEEGCP*HFQSPS
Trigger: AGACGGACTCTGGAAGTGGCAAGGACATCCCTCCTC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATCAGGATGCCTCATGTaGCCCATGGAGCTCAGACAT +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASSGCLM*PMELRH
Trigger: ATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGTCTAATGCTTCAGGATaGCTCATGTGCCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQSNASG*LMCPME
Trigger: CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR GCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGTCTAATGCTTCAGGATaGCTCATGTGCCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWSNASG*LMCPME
Trigger: CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCTATGCTTTCTGTCTGTaGCACGTCCAGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCYAFCL*HVQELS
Trigger: GCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATA...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCGGCAAAGGCTCTTCCTaGCGAGTGTATGTTATGCTT +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSGKGSS*RVYVML
Trigger: AAGCATAACATACACTCGCCAGGAAGAGCCTTTGCC...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGTTGACAATGTTCTGGTaGTTCAGCTTCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: NHSNASGCLMCPMELRHQLTMFW*FSFRRT
Trigger: GGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAA...CTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGTTGACAATGTTCTGGTaGTTCAGCTTCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMLTMFW*FSFRRT
Trigger: GGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAA...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTTGACAATGTTCTaGTGGTTCAGCTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KSSVGIILMLQDASCAPWSLTMF*WFSFRR
Trigger: CCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCT...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCACTGCCAGTGGCTGCATaGTACAAGGTCACTCCAATG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASLPVAA*YKVTPM
Trigger: CATTGGAGTGACCTTGTACCATGCAGCCACTGGCAG...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGACAGGGAGAAGACATaGACGACAACTCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDDREKT*TTTRCR
Trigger: CCTGCAGCGAGTTGTCGTCCATGTCTTCTCCCTGTC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCCTGCTCAGGCTCTCCTaGGTCTCCGTGATATTTTGG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLLRLS*VSVIFW
Trigger: CCAAAATATCACGGAGACCCAGGAGAGCCTGAGCAG...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGCTCACTGTCATTCATaGGCAGTGTTCTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMAHCHS*AVFLAS
Trigger: GGAGGCTAAGAACACTGCTCATGAATGACAGTGAGC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGTGACTAAGGACGCTTaGTACTTCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDVTKDA*YFCTHS
Trigger: GGAGTGCGTGCAGAAGTATCAAGCGTCCTTAGTCAC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCGGCGAGTGTATGTTATaGTTTCTGTCTGTGGCACGT +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCGECML*FLSVAR
Trigger: ACGTGCCACAGACAGAAAGCATAACATACACTCGCC...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGGCGAGTGTATGTTATaGTTTCTGTCTGTGGCACGT +
Preference number: 4 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMGECML*FLSVAR
Trigger: ACGTGCCACAGACAGAAAGCATAACATACACTCGCC...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCACAAGGTCACTCCAATaGTCCAGAGATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCTRSLQ*SRDPQS
Trigger: TGACTGTGGATCTCTGGAGCATTGGAGTGACCTTGT...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCACTGAATCTGCTGGATaGTTCTGTCCTCATGTACCT +
Preference number: 4 (lower is better)
Translates to: SSVGIILMLQDASCAPWSTESAG*FCPHVP
Trigger: AGGTACATGAGGACAGAAGCATCCAGCAGATTCAGT...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCGGCCTCCTGGAAAATaGCTATCGTGTTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDRPPGK*LSCCGH
Trigger: ATGCCCACAACACGATAGCCATTTTCCAGGAGGCCG...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTTGTGCACGGCCTCCTaGAAAATGGCTATCGTGTTG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLLCTAS*KMAIVL
Trigger: CAACACGATAGCCATTTTCCAGGAGGCCGTGCACAA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTATTTTGGGAGCATCTaGAGAGGACCTCCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLYFGSI*RGPPLE
Trigger: CTCTAGCGGAGGTCCTCTCCAGATGCTCCCAAAATA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATATTTTGGGAGCATCTaGAGAGGACCTCCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASYFGSI*RGPPLE
Trigger: CTCTAGCGGAGGTCCTCTCCAGATGCTCCCAAAATA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTCTCCGTGATATTTTaGGAGCATCTGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASVSVIF*EHLERT
Trigger: GGTCCTCTCCAGATGCTCCCAAAATATCACGGAGAC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGCAGAGCTCTTGCATGTaGAGAAGCAGGTCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQQSSCM*RSRSFR
Trigger: ACGAAAGGACCTGCTTCTCCACATGCAAGAGCTCTG...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTATTTAGCCGTTCGATaGTGCGGTTGTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMYLAVR*CGCCPG
Trigger: TCCTGGACAACAACCGCATCATCGAACGGCTAAATA...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTATTTAGCCGTTCGATaGTGCGGTTGTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLYLAVR*CGCCPG
Trigger: TCCTGGACAACAACCGCATCATCGAACGGCTAAATA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCATTTATTCCACTTCTTaGAGGTGCAGGCCTTGGACC +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCIYSTS*RCRPWT
Trigger: GGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAAT...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCACTGAATCTGCTGGATaGTTCTGTCCTCATGTACCT +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCTESAG*FCPHVP
Trigger: AGGTACATGAGGACAGAAGCATCCAGCAGATTCAGT...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATCCTCCTGGAACACCTaGAGGAGTCTTTTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASSSWNT*RSLLAK
Trigger: TTTAGCCAAAAGACTCCTGCAGGTGTTCCAGGAGGA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCGGCAAAGGCTCTTCCTaGCGAGTGTATGTTATGCTT +
Preference number: 4 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCGKGSS*RVYVML
Trigger: AAGCATAACATACACTCGCCAGGAAGAGCCTTTGCC...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATTTGACAATGTTCTGGTaGTTCAGCTTCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDLTMFW*FSFRRT
Trigger: GGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAA...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGTTGTAGCCAAGCCCTaGCCTCATCCTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDVVAKP*PHPRLL
Trigger: AAGAAGTCTAGGATGAGGCCAGGGCTTGGCTACAAC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCTTTTGGCTAAATGACTaGAATTCACCTTATCCAGCT +
Preference number: 4 (lower is better)
Translates to: EAKATFIPLLEGAGLGPAFWLND*NSPYPA
Trigger: AGCTGGATAAGGTGAATTTCAGTCATTTAGCCAAAA...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR GCA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGACTGAATCTGCTGGATaGTTCTGTCCTCATGTACCT +
Preference number: 4 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQTESAG*FCPHVP
Trigger: AGGTACATGAGGACAGAAGCATCCAGCAGATTCAGT...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR GCA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATTCCTCCTGGAACACCTaGAGGAGTCTTTTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDSSWNT*RSLLAK
Trigger: TTTAGCCAAAAGACTCCTGCAGGTGTTCCAGGAGGA...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGGCAGAAGAGCAGTGTTaGAATCATTCTAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: EQCWNHSNASGCLMCPMEAEEQC*NHSNAS
Trigger: TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTTTTGGCTAAATGACTaGAATTCACCTTATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCFWLND*NSPYPA
Trigger: AGCTGGATAAGGTGAATTTCAGTCATTTAGCCAAAA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CCA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGCAGAAGAGCAGTGTTaGAATCATTCTAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMAEEQC*NHSNAS
Trigger: TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR TCA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCATTTTGGCTAAATGACTaGAATTCACCTTATCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASFWLND*NSPYPA
Trigger: AGCTGGATAAGGTGAATTTCAGTCATTTAGCCAAAA...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS GCA 90 bp GGTGTAGCTCCACTCCAGGGGCCCGTTCTCCCGCCTCTGGGCACCTaGAATGGCCCCAGCCGGCTTCTCCGTGGTGATCCGGTACATGAT +
Preference number: 5 (lower is better)
Translates to: GVAPLQGPVLPPLGT*NGPSRLLRGDPVHD
Trigger: ATCATGTACCGGATCACCACGGAGAAGCCGGCTGGGGCCATTGCAGGTGCCCAGAGGCGGGAGAACGGGCCCCTGGAGTGGAGCTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 90 bp GGGATGGCTGTGCTGAAGAGGGTCAGGGGGCTGCTTGCCGTCGTGTaGGCGATGTGCTGTGCTGAGACGCTGGGCTCGAGGACACAGAGG +
Preference number: 5 (lower is better)
Translates to: GMAVLKRVRGLLAVV*AMCCAETLGSRTQR
Trigger: CCTCTGTGTCCTCGAGCCCAGCGTCTCAGCACAGCACATCGCCCACACGACGGCAAGCAGCCCCCTGACCCTCTTCAGCACAGCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 90 bp ACTGGTCGAAGCCCCAGCACTTGGCCTGCTCCACCTCCAGGATGTTaGCCAGGATGGGCACCAGCTGGCTCTGCAGCCCCAGTGACAGCT +
Preference number: 5 (lower is better)
Translates to: TGRSPSTWPAPPPGC*PGWAPAGSAAPVTA
Trigger: AGCTGTCACTGGGGCTGCAGAGCCAGCTGGTGCCCATCCTGGCCAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGGCTTCGACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS TCA 90 bp GAGGGTCAGGGGGCTGCTTGCCGTCGTGTGGGCGATGTGCTGTGCTaGGACGCTGGGCTCGAGGACACAGAGGTGACCCTCAAAGAGGTA +
Preference number: 5 (lower is better)
Translates to: EGQGAACRRVGDVLC*DAGLEDTEVTLKEV
Trigger: TACCTCTTTGAGGGTCACCTCTGTGTCCTCGAGCCCAGCGTCTCAGCACAGCACATCGCCCACACGACGGCAAGCAGCCCCCTGACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS GCA 90 bp CCCCCTGCCCCAGCAGGTCATCTGTGTGCCACAGGTAATTGGCTGTaGTCTGCATCTCCTGCCCTGAGCTGGCTGGTCACCTTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PPAPAGHLCATGNWL*SASPALSWLVTFCP
Trigger: GGGGCAGAAGGTGACCAGCCAGCTCAGGGCAGGAGATGCAGAGCACAGCCAATTACCTGTGGCACACAGATGACCTGCTGGGGCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605818.5
CDS CCA 90 bp GGGGGCTGCTTGCCGTCGTGTGGGCGATGTGCTGTGCTGAGACGCTaGGCTCGAGGACACAGAGGTGACCCTCAAAGAGGTACTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GGCLPSCGRCAVLRR*ARGHRGDPQRGTPG
Trigger: ACCAGGAGTACCTCTTTGAGGGTCACCTCTGTGTCCTCGAGCCCAGCGTCTCAGCACAGCACATCGCCCACACGACGGCAAGCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS GCA 90 bp CCTCCTGGTAGCCAAGGGCCCCTAGGACCCACAGGCAGGGCCAGTTaGAATGTCTGTGCCACCCCAGGAGCTGGGACTAGTGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PPGSQGPLGPTGRAS*NVCATPGAGTSGFL
Trigger: AAGAAACCCACTAGTCCCAGCTCCTGGGGTGGCACAGACATTGCAACTGGCCCTGCCTGTGGGTCCTAGGGGCCCTTGGCTACCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS GCA 90 bp CCCCCTGCCCCAGCAGGTCATCTGTGTGCCACAGGTAATTGGCTGTaGTCTGCATCTCCTGCCCTGAGCTGGCTGGTCACCTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PPAPAGHLCATGNWL*SASPALSWLVTFCL
Trigger: CAGGCAGAAGGTGACCAGCCAGCTCAGGGCAGGAGATGCAGAGCACAGCCAATTACCTGTGGCACACAGATGACCTGCTGGGGCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605726.1
CDS CCA 90 bp CAGTGGCCCCCTGCCCCAGCAGGTCATCTGTGTGCCACAGGTAATTaGCTGTGCTCTGCATCTCCTGCCCTGAGCTGGCTGGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: QWPPAPAGHLCATGN*LCSASPALSWLVTF
Trigger: GAAGGTGACCAGCCAGCTCAGGGCAGGAGATGCAGAGCACAGCCAATTACCTGTGGCACACAGATGACCTGCTGGGGCAGGGGGCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605726.1
ENST00000605818.5
CDS CCA 90 bp CAGCAACCAGCTCTCCGGATTTCTTGTTGCGGGCCTTGTACACACTaGCAGTGGCCCCCTGCCCCAGCAGGTCATCTGTGTGCCACAGGT +
Preference number: 5 (lower is better)
Translates to: QQPALRISCCGPCTH*QWPPAPAGHLCATG
Trigger: ACCTGTGGCACACAGATGACCTGCTGGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAGAGCTGGTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605726.1
ENST00000605818.5
CDS CCA 90 bp CAAAGGCATTCTCAGGGCTCTCCAGCACACTCAGCAGGCTCCCACTaGAGCAGTACTCCATCACCAGTACCTTCTGCCGGCTTCCGCCCG +
Preference number: 5 (lower is better)
Translates to: QRHSQGSPAHSAGSH*SSTPSPVPSAGFRP
Trigger: CGGGCGGAAGCCGGCAGAAGGTACTGGTGATGGAGTACTGCTCCAGTGGGAGCCTGCTGAGTGTGCTGGAGAGCCCTGAGAATGCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS CCA 90 bp GGATGTCACTGGTCTCCGCAAAGAACTGGTCGAAGCCCCAGCACTTaGCCTGCTCCACCTCCAGGATGTTGGCCAGGATGGGCACCAGCT +
Preference number: 5 (lower is better)
Translates to: GCHWSPQRTGRSPST*PAPPPGCWPGWAPA
Trigger: AGCTGGTGCCCATCCTGGCCAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGACCAGTGACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 90 bp TCCCGGTTCAGGCTGCTCAGGCTCTCCTGGGTCTCCGTGATATTTTaGGAGCATCTGGAGAGGACCTCCGCTAGAGTCCGCAGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: SRFRLLRLSWVSVIF*EHLERTSARVRSLD
Trigger: GTCCAGGCTGCGGACTCTAGCGGAGGTCCTCTCCAGATGCTCCCAAAATATCACGGAGACCCAGGAGAGCCTGAGCAGCCTGAACCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 90 bp TCCCGGCTCTTCACCAGCTCCCGGTTCAGGCTGCTCAGGCTCTCCTaGGTCTCCGTGATATTTTGGGAGCATCTGGAGAGGACCTCCGCT +
Preference number: 5 (lower is better)
Translates to: SRLFTSSRFRLLRLS*VSVIFWEHLERTSA
Trigger: AGCGGAGGTCCTCTCCAGATGCTCCCAAAATATCACGGAGACCCAGGAGAGCCTGAGCAGCCTGAACCGGGAGCTGGTGAAGAGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 90 bp CCAGCTCTCCGGATTTCTTGTTGCGGGCCTTGTACACACTGGCAGTaGCCCCCTGCCCCAGCAGGTCATCTGTGTGCCACAGGTAATTGG +
Preference number: 5 (lower is better)
Translates to: PALRISCCGPCTHWQ*PPAPAGHLCATGNW
Trigger: CCAATTACCTGTGGCACACAGATGACCTGCTGGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605726.1
ENST00000605818.5
CDS-3UTR CAA 90 bp CCAGCTGGAGCCTCAGAGAGTGAGGGAGAGCCAAAGGGGCCCCAAGACACTGGCAGCTCTCCGGATTTCTaGTTGCGGGCCTTGTACACA +
Preference number: 5 (lower is better)
Translates to: PAGASESEGEPKGPQDTGSSPDF*LRALYT
Trigger: TGTGTACAAGGCCCGCAACAAGAAATCCGGAGAGCT...GCCAGTGTCTTGGGGCCCCTTTGGCTCTCCCTCACTCTCTGAGGCTCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS GCA 90 bp TGCAGGACTGCCTGGGACAGGGAGAAGACATGGACGACAACTCGCTaGAGGATGTCACTGGTCTCCGCAAAGAACTGGTCGAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CRTAWDREKTWTTTR*RMSLVSAKNWSKPQ
Trigger: CTGGGGCTTCGACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCATGTCTTCTCCCTGTCCCAGGCAGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 90 bp CTTCCGCCCGTCTCCTCCACCGCAAAGAGCTTGACAATGTTCTGGTaGTTCAGCTTCCGCAGGACCTCAAACTCCCTCACCTGCACCTCG +
Preference number: 5 (lower is better)
Translates to: LPPVSSTAKSLTMFW*FSFRRTSNSLTCTS
Trigger: CGAGGTGCAGGTGAGGGAGTTTGAGGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGAGGAGACGGGCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS CCA 90 bp TGGACGACAACTCGCTGCAGGATGTCACTGGTCTCCGCAAAGAACTaGTCGAAGCCCCAGCACTTGGCCTGCTCCACCTCCAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: WTTTRCRMSLVSAKN*SKPQHLACSTSRML
Trigger: CAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 90 bp GGGACAGGGAGAAGACATGGACGACAACTCGCTGCAGGATGTCACTaGTCTCCGCAAAGAACTGGTCGAAGCCCCAGCACTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GTGRRHGRQLAAGCH*SPQRTGRSPSTWPA
Trigger: AGCAGGCCAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCATGTCTTCTCCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 90 bp CTGCCCCACACTCTGAGCTGCCCTGAGTCAGGCAAAGGCTCTTCCTaGCGAGTGTATGTTATGCTTTCTGTCTGTGGCACGTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LPHTLSCPESGKGSS*RVYVMLSVCGTSRS
Trigger: GCTCCTGGACGTGCCACAGACAGAAAGCATAACATACACTCGCCAGGAAGAGCCTTTGCCTGACTCAGGGCAGCTCAGAGTGTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605818.5
CDS CCA 90 bp ACTCCAATGCTCCAGAGATCCACAGTCACCCCGAACGCTTTTTGCTaGGGCTTTCGAAGCACCGCCCGCTCATACATGTCGGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: TPMLQRSTVTPNAFC*GFRSTARSYMSGCR
Trigger: CCTGCATCCCGACATGTATGAGCGGGCGGTGCTTCGAAAGCCCCAGCAAAAAGCGTTCGGGGTGACTGTGGATCTCTGGAGCATTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS-3UTR CAA 90 bp AGGTCGTTTGACCTACTGCCCTGGGGAAACCCCAGGAGGCCTCCTCTCCTGTTGGGTCTCCGTGATATTTaGGGAGCATCTGGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: RSFDLLPWGNPRRPPLLLGLRDI*GASGED
Trigger: GTCCTCTCCAGATGCTCCCAAAATATCACGGAGACC...CAACAGGAGAGGAGGCCTCCTGGGGTTTCCCCAGGGCAGTAGGTCAAACGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS GCA 90 bp GCTGCCCTGAGTCAGGCAAAGGCTCTTCCTGGCGAGTGTATGTTATaGTTTCTGTCTGTGGCACGTCCAGGAGCTGAGCCCATCTCCACT +
Preference number: 5 (lower is better)
Translates to: AALSQAKALPGECML*FLSVARPGAEPIST
Trigger: AGTGGAGATGGGCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATAACATACACTCGCCAGGAAGAGCCTTTGCCTGACTCAGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS GCA 90 bp GTTCCAGCAACCAGATGGGAAAGTGGTGTGCCCAAGCCTGCAGCATaGCCGGAACCTGCTGGAACAGGCCTCAGAAGTCTTGACTTAGCA +
Preference number: 5 (lower is better)
Translates to: VPATRWESGVPKPAA*PEPAGTGLRSLDLA
Trigger: TGCTAAGTCAAGACTTCTGAGGCCTGTTCCAGCAGGTTCCGGGCATGCTGCAGGCTTGGGCACACCACTTTCCCATCTGGTTGCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605818.5
CDS CCA 90 bp AGGCAAAGGCTCTTCCTGGCGAGTGTATGTTATGCTTTCTGTCTGTaGCACGTCCAGGAGCTGAGCCCATCTCCACTGCAGGGGATGCAG +
Preference number: 5 (lower is better)
Translates to: RQRLFLASVCYAFCL*HVQELSPSPLQGMQ
Trigger: CTGCATCCCCTGCAGTGGAGATGGGCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATAACATACACTCGCCAGGAAGAGCCTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS-3UTR CAA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAAGCCACACTGGTCTGCTaGTGCACGGCCTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKATLVC*CTASWK
Trigger: TTTCCAGGAGGCCGTGCACAAGCAGACCAGTGTGGC...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp ATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGGCCTGCAGGTCCACTTaGGGGACGAACTTGGGGACG +
Preference number: 5 (lower is better)
Translates to: ILMLQDASCAPWSSDIRRACRST*GTNLGT
Trigger: CGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGC...CCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CAA 90 bp AAGAACAGGAGGCTCTCTATGTTGCCTGAGGCTGGCAGTGGTGACCCTCAGAAATTCTTCCCTGCCTCCTaGTGGCGGTGGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: KNRRLSMLPEAGSGDPQKFFPAS*WRWDTK
Trigger: CTTGGTGTCCCACCGCCACAAGGAGGCAGGGAAGAA...TTTCTGAGGGTCACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCGCAGGGGATGCAGGCTaGTGGGACTGGGTGACACCC +
Preference number: 5 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCAGDAG*WDWVTP
Trigger: GGGTGTCACCCAGTCCCACAAGCCTGCATCCCCTGC...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCCACAGGCAGGGCCAGTaGCAATGTCTGTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPHRQGQ*QCLCHP
Trigger: GGGGTGGCACAGACATTGCAACTGGCCCTGCCTGTG...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GGAGTGAAGTCCTATAAACCAGAGGGAGTGGGAAGGCGTATGAGAGCTTCTTCTCACAGGCAGGGCCAGTaGCAATGTCTGTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: GVKSYKPEGVGRRMRASSHRQGQ*QCLCHP
Trigger: GGGGTGGCACAGACATTGCAACTGGCCCTGCCTGTG...AGAAGAAGCTCTCATACGCCTTCCCACTCCCTCTGGTTTATAGGACTTCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCCACAGGCAGGGCCAGTaGCAATGTCTGTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: SSVGIILMLQDASCAPWSHRQGQ*QCLCHP
Trigger: GGGGTGGCACAGACATTGCAACTGGCCCTGCCTGTG...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCACTTTGGGGACGAACTaGGGGACGTCCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: EAKATFIPLLEGAGLGPATLGTN*GTSRAG
Trigger: CCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAGT...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS CCA 90 bp ATTTCCCACACTCTGAGCTGCCCTGAGTCAGGCAAAGGCTCTTCCTaGCGAGTGTATGTTATGCTTTCTGTCTGTGGCACGTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: ISHTLSCPESGKGSS*RVYVMLSVCGTSRS
Trigger: GCTCCTGGACGTGCCACAGACAGAAAGCATAACATACACTCGCCAGGAAGAGCCTTTGCCTGACTCAGGGCAGCTCAGAGTGTGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584998.5
CDS-3UTR CAA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGCAGGGGATGCAGGCTaGTGGGACTGGGTGACACCC +
Preference number: 5 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQAGDAG*WDWVTP
Trigger: GGGTGTCACCCAGTCCCACAAGCCTGCATCCCCTGC...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCGCCACACTGGTCTGCTaGTGCACGGCCTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SSVGIILMLQDASCAPWSATLVC*CTASWK
Trigger: TTTCCAGGAGGCCGTGCACAAGCAGACCAGTGTGGC...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCACTTTGGGGACGAACTaGGGGACGTCCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SSVGIILMLQDASCAPWSTLGTN*GTSRAG
Trigger: CCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAGT...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGACTTTGGGGACGAACTaGGGGACGTCCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: EQCWNHSNASGCLMCPMETLGTN*GTSRAG
Trigger: CCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAGT...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGTCGATGATGCGGTTGTaGTCCAGGAGGTCAGATGCC +
Preference number: 5 (lower is better)
Translates to: SNASGCLMCPMELRHQEVSMMRL*SRRSDA
Trigger: GGCATCTGACCTCCTGGACAACAACCGCATCATCGA...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CAA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCAGGAGGCTCTCTATGTaGCCTGAGGCTGGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: EAKATFIPLLEGAGLGPARRLSM*PEAGSG
Trigger: ACCACTGCCAGCCTCAGGCAACATAGAGAGCCTCCT...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCAGGGGATGCAGGCTaGTGGGACTGGGTGACACCC +
Preference number: 5 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDAGDAG*WDWVTP
Trigger: GGGTGTCACCCAGTCCCACAAGCCTGCATCCCCTGC...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp AGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTTCTTGTTGCGGGCCTaGTACACACTGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: SSVGIILMLQDASCAPWSFLLRA*YTLAVA
Trigger: GGCCACTGCCAGTGTGTACAAGGCCCGCAACAAGAA...GCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR CAA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGAGCTCTCCGGATTTCTaGTTGCGGGCCTTGTACACA +
Preference number: 5 (lower is better)
Translates to: SNASGCLMCPMELRHQEVSSPDF*LRALYT
Trigger: TGTGTACAAGGCCCGCAACAAGAAATCCGGAGAGCT...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CAA 90 bp AAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGCGGTACATGATCTCCTaGTTCCGCCGTGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: KSSVGIILMLQDASCAPWRYMIS*FRRGPP
Trigger: TGGTGGGCCACGGCGGAACAAGGAGATCATGTACCG...CCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCGGTACATGATCTCCTaGTTCCGCCGTGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCRYMIS*FRRGPP
Trigger: TGGTGGGCCACGGCGGAACAAGGAGATCATGTACCG...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGGCCTGCAGGTCCACTTaGGGGACGAACTTGGGGACG +
Preference number: 5 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMACRST*GTNLGT
Trigger: CGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGC...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCGCCTGCAGGTCCACTTaGGGGACGAACTTGGGGACG +
Preference number: 5 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCACRST*GTNLGT
Trigger: CGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGC...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp ATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGAGGAGGGATGTCCTaGCCACTTCCAGAGTCCGTC +
Preference number: 5 (lower is better)
Translates to: IILMLQDASCAPWSSDIRRGGMS*PLPESV
Trigger: GACGGACTCTGGAAGTGGCAAGGACATCCCTCCTCT...CCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CAA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCAGAGGAGGGATGTCCTaGCCACTTCCAGAGTCCGTC +
Preference number: 5 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPRGGMS*PLPESV
Trigger: GACGGACTCTGGAAGTGGCAAGGACATCCCTCCTCT...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GAAGCAAAGGCCACATTTATTCCACTTCTTGAAGGTGCAGGCCTTGGACCTGCCACCACCCTCATCCTCTaGCCGTGTGTGACTAAGGAC +
Preference number: 5 (lower is better)
Translates to: EAKATFIPLLEGAGLGPATTLIL*PCVTKD
Trigger: GTCCTTAGTCACACACGGCAAGAGGATGAGGGTGGT...GGCAGGTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATGTGGCCTTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp GAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGAGCTCTTCCAGGAGCTaGCTGAGACTCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: EQCWNHSNASGCLMCPMESSSRS*LRLSWT
Trigger: GGTCCAGGAGAGTCTCAGCAAGCTCCTGGAAGAGCT...CTCCATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TCTAATGCTTCAGGATGCCTCATGTGCCCCATGGAGCTCAGACATCAGGAGGTGTCCACCGCAAAGAGCTaGACAATGTTCTGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SNASGCLMCPMELRHQEVSTAKS*TMFWWF
Trigger: GAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGA...CACCTCCTGATGTCTGAGCTCCATGGGGCACATGAGGCATCCTGAAGCATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CAA 90 bp GAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCATGAGAGGAGGGATGTCCTaGCCACTTCCAGAGTCCGTC +
Preference number: 5 (lower is better)
Translates to: EEQCWNHSNASGCLMCPMRGGMS*PLPESV
Trigger: GACGGACTCTGGAAGTGGCAAGGACATCCCTCCTCT...CATGGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCACCACCCTCATCCTCTaGCCGTGTGTGACTAAGGAC +
Preference number: 5 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPTTLIL*PCVTKD
Trigger: GTCCTTAGTCACACACGGCAAGAGGATGAGGGTGGT...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCCCCGGATCTTGCCCTGGGTaGGTCTCATGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: AEEQCWNHSNASGCLMCPGSCPG*VSWCRR
Trigger: TCTTCTGCACCATGAGACCAACCCAGGGCAAGATCC...GGGGCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GGAGTGAAGTCCTATAAACCAGAGGGAGTGGGAAGGCGTATGAGAGCTTCTTCTTCTCCGGATTTCTTGTaGCGGGCCTTGTACACACTG +
Preference number: 5 (lower is better)
Translates to: GVKSYKPEGVGRRMRASSSPDFL*RALYTL
Trigger: CAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAGA...AGAAGAAGCTCTCATACGCCTTCCCACTCCCTCTGGTTTATAGGACTTCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCGGTACATGATCTCCTaGTTCCGCCGTGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDRYMIS*FRRGPP
Trigger: TGGTGGGCCACGGCGGAACAAGGAGATCATGTACCG...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGAGCTCTTCCAGGAGCTaGCTGAGACTCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMSSSRS*LRLSWT
Trigger: GGTCCAGGAGAGTCTCAGCAAGCTCCTGGAAGAGCT...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCCCCTCGCAGAGCTCTaGCATGTGGAGAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDPLAEL*HVEKQV
Trigger: GACCTGCTTCTCCACATGCAAGAGCTCTGCGAGGGG...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTTGAAGGTGCAGGCCTaGGACCTGCCCAGACTCACA +
Preference number: 5 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQLKVQA*DLPRLT
Trigger: TGTGAGTCTGGGCAGGTCCAAGGCCTGCACCTTCAA...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS-3UTR CAA 90 bp GTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATTTCTTGTTGCGGGCCTaGTACACACTGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VGLMVQKSSVGIILMLQDFLLRA*YTLAVA
Trigger: GGCCACTGCCAGTGTGTACAAGGCCCGCAACAAGAA...ATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR CAA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCATGATGTTCCCCGGCTaGATGTCGCGATGCACAATG +
Preference number: 5 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCMMFPG*MSRCTM
Trigger: CATTGTGCATCGCGACATCAAGCCGGGGAACATCAT...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCGGTCTCCGTGATATTTaGGGAGCATCTGGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCGLRDI*GASGED
Trigger: GTCCTCTCCAGATGCTCCCAAAATATCACGGAGACC...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCACCACCCTCATCCTCTaGCCGTGTGTGACTAAGGAC +
Preference number: 5 (lower is better)
Translates to: WSHGAEEQCWNHSNASGCTTLIL*PCVTKD
Trigger: GTCCTTAGTCACACACGGCAAGAGGATGAGGGTGGT...GCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAAGAGCTCTTGCATGCTaGCTGAGACTCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASRALAC*LRLSWT
Trigger: GGTCCAGGAGAGTCTCAGCAAGCATGCAAGAGCTCT...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS-3UTR CAA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCTCGATGATGCGGTTGTaGTCCAGGAGGTCAGATGCC +
Preference number: 5 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLSMMRL*SRRSDA
Trigger: GGCATCTGACCTCCTGGACAACAACCGCATCATCGA...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTCGATGATGCGGTTGTaGTCCAGGAGGTCAGATGCC +
Preference number: 5 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMSMMRL*SRRSDA
Trigger: GGCATCTGACCTCCTGGACAACAACCGCATCATCGA...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATCTTGCCCTGGGTaGGTCTCATGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASGSCPG*VSWCRR
Trigger: TCTTCTGCACCATGAGACCAACCCAGGGCAAGATCC...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGTCTCCGGATTTCTTGTaGCGGGCCTTGTACACACTG +
Preference number: 5 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQSPDFL*RALYTL
Trigger: CAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAGA...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578328.6
ENST00000581977.7
CDS-3UTR CAA 90 bp GGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTGCTCCACCGCAAAGAGCTaGACAATGTTCTGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: GAEEQCWNHSNASGCLMCSTAKS*TMFWWF
Trigger: GAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGA...GCACATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGATGATGTTCCCCGGCTaGATGTCGCGATGCACAATG +
Preference number: 5 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMMMFPG*MSRCTM
Trigger: CATTGTGCATCGCGACATCAAGCCGGGGAACATCAT...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CTGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAATGATGTTCCCCGGCTaGATGTCGCGATGCACAATG +
Preference number: 5 (lower is better)
Translates to: LGWSHGAEEQCWNHSNASMMFPG*MSRCTM
Trigger: CATTGTGCATCGCGACATCAAGCCGGGGAACATCAT...TGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCGGTCTCCGTGATATTTaGGGAGCATCTGGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SHGAEEQCWNHSNASGCLGLRDI*GASGED
Trigger: GTCCTCTCCAGATGCTCCCAAAATATCACGGAGACC...GAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp CATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGGATGCCTCATGTCCACCGCAAAGAGCTaGACAATGTTCTGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: HGAEEQCWNHSNASGCLMSTAKS*TMFWWF
Trigger: GAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGA...CATGAGGCATCCTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS-3UTR CAA 90 bp TGGGTTGGTCTCATGGTGCAGAAGAGCAGTGTTGGAATCATTCTAATGCTTCAGCATTTATTCCACTTCTaGAAGGTGCAGGCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: WVGLMVQKSSVGIILMLQHLFHF*KVQALD
Trigger: GTCCAAGGCCTGCACCTTCAAGAAGTGGAATAAATG...CTGAAGCATTAGAATGATTCCAACACTGCTCTTCTGCACCATGAGACCAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581977.7
CDS TCA 72 bp GGGGCTGCTTGCCGTCGTGTGGGCGATGTGCTGTGCTaGGACGCTGGGCTCGAGGACACAGAGGTGACCCTC +
Preference number: 6 (lower is better)
Translates to: GAACRRVGDVLC*DAGLEDTEVTL
Trigger: GAGGGTCACCTCTGTGTCCTCGAGCCCAGCGTCTCAGCACAGCACATCGCCCACACGACGGCAAGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS GCA 72 bp AGGGTCAGGGGGCTGCTTGCCGTCGTGTGGGCGATGTaGTGTGCTGAGACGCTGGGCTCGAGGACACAGAGG +
Preference number: 6 (lower is better)
Translates to: RVRGLLAVVWAM*CAETLGSRTQR
Trigger: CCTCTGTGTCCTCGAGCCCAGCGTCTCAGCACAGCACATCGCCCACACGACGGCAAGCAGCCCCCTGACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 72 bp GTGCTGAAGAGGGTCAGGGGGCTGCTTGCCGTCGTGTaGGCGATGTGCTGTGCTGAGACGCTGGGCTCGAGG +
Preference number: 6 (lower is better)
Translates to: VLKRVRGLLAVV*AMCCAETLGSR
Trigger: CCTCGAGCCCAGCGTCTCAGCACAGCACATCGCCCACACGACGGCAAGCAGCCCCCTGACCCTCTTCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CAA 72 bp GGAGCTGAGCCCATCTCCACTGCAGGGGATGCAGGCTaGTGGGACTGGGTGACACCCCCAGAGCTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: GAEPISTAGDAG*WDWVTPPELSG
Trigger: CCCTGAAAGCTCTGGGGGTGTCACCCAGTCCCACAAGCCTGCATCCCCTGCAGTGGAGATGGGCTCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CAA 90 bp GGCTGGGGTAAGGAGCTATGGGAGGCGGCGAGGCCTGAGCCCCCTTaGCTCGGTCCTGAAGGAGCTGGTGAGATAGCTCTTCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GWGKELWEAARPEPP*LGPEGAGEIALPGA
Trigger: AGCTCCTGGAAGAGCTATCTCACCAGCTCCTTCAGGACCGAGCAAAGGGGGCTCAGGCCTCGCCGCCTCCCATAGCTCCTTACCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS GCA 72 bp CTCCCACTGGAGCAGTACTCCATCACCAGTACCTTCTaGCGGCTTCCGCCCGTCTCCTCCACCGCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: LPLEQYSITSTF*RLPPVSSTAKS
Trigger: GCTCTTTGCGGTGGAGGAGACGGGCGGAAGCCGGCAGAAGGTACTGGTGATGGAGTACTGCTCCAGTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS CCA 72 bp TTGATGTCGCGATGCACAATGCCGTTCTCCCGCAGGTaGTTCATGCCGGCCACCACACAGCGCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: LMSRCTMPFSRR*FMPATTQRSTT
Trigger: GGTGGTGCTGCGCTGTGTGGTGGCCGGCATGAACCACCTGCGGGAGAACGGCATTGTGCATCGCGACATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS GCA 72 bp TCCAGCAACCAGATGGGAAAGTGGTGTGCCCAAGCCTaGAGCATGCCCGGAACCTGCTGGAACAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SSNQMGKWCAQA*SMPGTCWNRPQ
Trigger: CTGAGGCCTGTTCCAGCAGGTTCCGGGCATGCTGCAGGCTTGGGCACACCACTTTCCCATCTGGTTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605818.5
CDS CCA 72 bp CGGATTTCTTGTTGCGGGCCTTGTACACACTGGCAGTaGCCCCCTGCCCCAGCAGGTCATCTGTGTGCCACA +
Preference number: 6 (lower is better)
Translates to: RISCCGPCTHWQ*PPAPAGHLCAT
Trigger: TGTGGCACACAGATGACCTGCTGGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGCAACAAGAAATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605726.1
ENST00000605818.5
CDS CCA 72 bp GCTCTCCGGATTTCTTGTTGCGGGCCTTGTACACACTaGCAGTGGCCCCCTGCCCCAGCAGGTCATCTGTGT +
Preference number: 6 (lower is better)
Translates to: ALRISCCGPCTH*QWPPAPAGHLC
Trigger: ACACAGATGACCTGCTGGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGCAACAAGAAATCCGGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000605726.1
ENST00000605818.5
CDS CCA 72 bp TCTCAGGGCTCTCCAGCACACTCAGCAGGCTCCCACTaGAGCAGTACTCCATCACCAGTACCTTCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: SQGSPAHSAGSH*SSTPSPVPSAG
Trigger: GCCGGCAGAAGGTACTGGTGATGGAGTACTGCTCCAGTGGGAGCCTGCTGAGTGTGCTGGAGAGCCCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS CCA 72 bp CGTGGTGATCCGGTACATGATCTCCTTGTTCCGCCGTaGCCCACCAAAGGGGATGAAGGGCAGGCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: RGDPVHDLLVPP*PTKGDEGQAAS
Trigger: ACTGGCAGCCTGCCCTTCATCCCCTTTGGTGGGCCACGGCGGAACAAGGAGATCATGTACCGGATCACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 72 bp TGGTCTCCGCAAAGAACTGGTCGAAGCCCCAGCACTTaGCCTGCTCCACCTCCAGGATGTTGGCCAGGATGG +
Preference number: 6 (lower is better)
Translates to: WSPQRTGRSPST*PAPPPGCWPGW
Trigger: CCATCCTGGCCAACATCCTGGAGGTGGAGCAGGCCAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 72 bp ACTCGCTGCAGGATGTCACTGGTCTCCGCAAAGAACTaGTCGAAGCCCCAGCACTTGGCCTGCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: TRCRMSLVSAKN*SKPQHLACSTS
Trigger: GGAGGTGGAGCAGGCCAAGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 72 bp CCTTGGCAGTGTTGTAATCCGCCTGCAGGTCCACTTTaGGGACGAACTTGGGGACGTCCAGAGCAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PWQCCNPPAGPL*GRTWGRPEQGP
Trigger: GGGACCCTGCTCTGGACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGCGGATTACAACACTGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CAA 72 bp TGCCGGCTTCCGCCCGTCTCCTCCACCGCAAAGAGCTaGACAATGTTCTGGTGGTTCAGCTTCCGCAGGACC +
Preference number: 6 (lower is better)
Translates to: CRLPPVSSTAKS*TMFWWFSFRRT
Trigger: GGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGAGGAGACGGGCGGAAGCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS CAA 72 bp AAGGAGCTATGGGAGGCGGCGAGGCCTGAGCCCCCTTaGCTCGGTCCTGAAGGAGCTGGTGAGATAGCTCTT +
Preference number: 6 (lower is better)
Translates to: KELWEAARPEPP*LGPEGAGEIAL
Trigger: AAGAGCTATCTCACCAGCTCCTTCAGGACCGAGCAAAGGGGGCTCAGGCCTCGCCGCCTCCCATAGCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581977.7
ENST00000584998.5
CDS GCA 72 bp CAGCAACCAGCTCTCCGGATTTCCCACACTCTGAGCTaGCCTGAGTCAGGCAAAGGCTCTTCCTGGCGAGTG +
Preference number: 6 (lower is better)
Translates to: QQPALRISHTLS*PESGKGSSWRV
Trigger: CACTCGCCAGGAAGAGCCTTTGCCTGACTCAGGGCAGCTCAGAGTGTGGGAAATCCGGAGAGCTGGTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584998.5
CDS CCA 72 bp CCTCGCAGAGCTCTTGCATGCTTGCTGAGACTCTCCTaGACCCCCTGGGCTTCTGTGTTACAGGCAGCCACA +
Preference number: 6 (lower is better)
Translates to: PRRALACLLRLS*TPWASVLQAAT
Trigger: TGTGGCTGCCTGTAACACAGAAGCCCAGGGGGTCCAGGAGAGTCTCAGCAAGCATGCAAGAGCTCTGCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578328.6
CDS CAA 90 bp AGTACCTTCTGCCGGCTTCCGCCCGTCTCCTCCACCGCAAAGAGCTaGACAATGTTCTGGTGGTTCAGCTTCCGCAGGACCTCAAACTCC +
Preference number: 6 (lower is better)
Translates to: STFCRLPPVSSTAKS*TMFWWFSFRRTSNS
Trigger: GGAGTTTGAGGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGAGGAGACGGGCGGAAGCCGGCAGAAGGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS GCA 72 bp ACCAGATGGGAAAGTGGTGTGCCCAAGCCTGCAGCATaGCCGGAACCTGCTGGAACAGGCCTCAGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: TRWESGVPKPAA*PEPAGTGLRSL
Trigger: AAGACTTCTGAGGCCTGTTCCAGCAGGTTCCGGGCATGCTGCAGGCTTGGGCACACCACTTTCCCATCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605818.5
CDS CCA 72 bp CTCCAGAGATCCACAGTCACCCCGAACGCTTTTTGCTaGGGCTTTCGAAGCACCGCCCGCTCATACATGTCG +
Preference number: 6 (lower is better)
Translates to: LQRSTVTPNAFC*GFRSTARSYMS
Trigger: CGACATGTATGAGCGGGCGGTGCTTCGAAAGCCCCAGCAAAAAGCGTTCGGGGTGACTGTGGATCTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 72 bp ATGTGGTGCAGGACTGCCTGGGACAGGGAGAAGACATaGACGACAACTCGCTGCAGGATGTCACTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: MWCRTAWDREKT*TTTRCRMSLVS
Trigger: GGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCATGTCTTCTCCCTGTCCCAGGCAGTCCTGCACCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS GCA 72 bp CCGTTCGATGATGCGGTTGTTGTCCAGGAGGTCAGATaGCAGCAGCTTCATCCCCTCGCAGAGCTCTTGCAT +
Preference number: 6 (lower is better)
Translates to: PFDDAVVVQEVR*QQLHPLAELLH
Trigger: ATGCAAGAGCTCTGCGAGGGGATGAAGCTGCTGGCATCTGACCTCCTGGACAACAACCGCATCATCGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS GCA 72 bp AAGAACTCGTTCCAGCAACCAGATGGGAAAGTGGTGTaGCCAAGCCTGCAGCATGCCCGGAACCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: KNSFQQPDGKVV*PSLQHARNLLE
Trigger: TTCCAGCAGGTTCCGGGCATGCTGCAGGCTTGGGCACACCACTTTCCCATCTGGTTGCTGGAACGAGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605818.5
CDS TCA 72 bp TATGTTATGCTTTCTGTCTGTGGCACGTCCAGGAGCTaGGCCCATCTCCACTGCAGGGGATGCAGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: YVMLSVCGTSRS*AHLHCRGCRLV
Trigger: CACAAGCCTGCATCCCCTGCAGTGGAGATGGGCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATAACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS TCA 72 bp TGGTCTCGTGCACCACCCTCATCCTCTTGCCGTGTGTaGCTAAGGACGCTTGATACTTCTGCACGCACTCCT +
Preference number: 6 (lower is better)
Translates to: WSRAPPSSSCRV*LRTLDTSARTP
Trigger: AGGAGTGCGTGCAGAAGTATCAAGCGTCCTTAGTCACACACGGCAAGAGGATGAGGGTGGTGCACGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
CDS CCA 72 bp CTCTTCCTGGCGAGTGTATGTTATGCTTTCTGTCTGTaGCACGTCCAGGAGCTGAGCCCATCTCCACTGCAG +
Preference number: 6 (lower is better)
Translates to: LFLASVCYAFCL*HVQELSPSPLQ
Trigger: CTGCAGTGGAGATGGGCTCAGCTCCTGGACGTGCCACAGACAGAAAGCATAACATACACTCGCCAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 72 bp GTCTCCTCCACCGCAAAGAGCTTGACAATGTTCTGGTaGTTCAGCTTCCGCAGGACCTCAAACTCCCTCACC +
Preference number: 6 (lower is better)
Translates to: VSSTAKSLTMFW*FSFRRTSNSLT
Trigger: GGTGAGGGAGTTTGAGGTCCTGCGGAAGCTGAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605726.1
ENST00000605818.5
CDS CCA 72 bp AGAAGACATGGACGACAACTCGCTGCAGGATGTCACTaGTCTCCGCAAAGAACTGGTCGAAGCCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: RRHGRQLAAGCH*SPQRTGRSPST
Trigger: AGTGCTGGGGCTTCGACCAGTTCTTTGCGGAGACCAGTGACATCCTGCAGCGAGTTGTCGTCCATGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578328.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5
CDS CCA 72 bp ACTCTGAGCTGCCCTGAGTCAGGCAAAGGCTCTTCCTaGCGAGTGTATGTTATGCTTTCTGTCTGTGGCACG +
Preference number: 6 (lower is better)
Translates to: TLSCPESGKGSS*RVYVMLSVCGT
Trigger: CGTGCCACAGACAGAAAGCATAACATACACTCGCCAGGAAGAGCCTTTGCCTGACTCAGGGCAGCTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000578328.6
ENST00000579827.6
ENST00000581977.7
ENST00000584998.5
ENST00000605818.5