Pregenerated sensors for IKBIP (Homo sapiens)
Ensembl gene IDs: ENSG00000166130Ensembl transcript IDs: ENST00000299157.5, ENST00000342502.6, ENST00000393042.3
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTCCACTCAGGCTGGAGTaGAGTGGCGCGATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: EFCQCTQIRDIQKSRSVIPLRLE*SGAISA Trigger: AGCCGAGATCGCGCCACTGCACTCCAGCCTGAGTGG...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| 3UTR-3UTR TCA 90 bp | CCTAACTCCAGTGGAGAAGGAGTTTGGGGGTTCTCCAAAAACTTGCAAATTTACGTGACAGAAAAGGTATaGGACATAGGTTTGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: PNSSGEGVWGFSKNLQIYVTEKV*DIGLKM Trigger: CATTTTCAAACCTATGTCTCATACCTTTTCTGTCAC...GTAAATTTGCAAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTGGAGTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| 3UTR-3UTR TCA 90 bp | CCTAACTCCAGTGGAGAAGGAGTTTGGGGGTTCTCCAAAAACTTGCAAATTTACCTACCTTTTTGTAACTaGCTGCTTTCAAGTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PNSSGEGVWGFSKNLQIYLPFCN*LLSSSL Trigger: CAAAGAACTTGAAAGCAGTCAGTTACAAAAAGGTAG...GTAAATTTGCAAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTGGAGTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| 3UTR CAA 90 bp | ACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATGTTaGTCGAAGTCACTCTTTAGTTCGGTTAGCGTCTTCTTAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: TLALSPSKLRNLSVC*SKSLFSSVSVFLTE Trigger: CTCTGTTAAGAAGACGCTAACCGAACTAAAGAGTGACTTCGACAAACATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTTTGGTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGACTTTTGTAATGTCTTaGGAAAGCGTCGTCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: TFGFRSFAKVTVFRTLALTFVMS*ESVVRL Trigger: CAGTCTGACGACGCTTTCTCAAGACATTACAAAAGT...CAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAACCAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTATTTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACCTCTTTATTAGCCCCTaGAGACATCAATATATGTGG | + |
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Preference number: 2 (lower is better) Translates to: AYLSKPSRDHGSSKLMSNLFISP*RHQYMW Trigger: CCACATATATTGATGTCTCCAGGGGCTAATAAAGAG...GTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAAATAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTGACAGTAAGTTCAGGTaGCAGAAAAGGTATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: EFCQCTQIRDIQKSRSVIDSKFR*QKRYET Trigger: TGTCTCATACCTTTTCTGTCACCTGAACTTACTGTC...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| 3UTR CAA 90 bp | ACTAAACCTGAAATCCGTCGTATATCTGTTTTTACACTTGTAATCTaGAGACCAACATCTTTTGCCATGGAAGTTGTACTTTGGTCTACT | + |
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Preference number: 2 (lower is better) Translates to: TKPEIRRISVFTLVI*RPTSFAMEVVLWST Trigger: AGTAGACCAAAGTACAACTTCCATGGCAAAAGATGTTGGTCTCAAGATTACAAGTGTAAAAACAGATATACGACGGATTTCAGGTTTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR CAA 90 bp | ACCTTTGGTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTaGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATGTTTG | + |
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Preference number: 2 (lower is better) Translates to: TFGFRSFAKVTVFRT*ALSPSKLRNLSVCL Trigger: CAAACATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAACCAAAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATCTGTCTTTCGGAGCGTaGCTGTTCGATCAATACTGC | + |
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Preference number: 3 (lower is better) Translates to: LSSELWLCHLLSLEIYLYLSFGA*LFDQYC Trigger: GCAGTATTGATCGAACAGCAACGCTCCGAAAGACAG...ATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CAA 90 bp | GATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACTGCTTGAAAGAAGATCACATGGAAGTTGTACTTaGGTCTACTTTTGTAATGTC | + |
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Preference number: 3 (lower is better) Translates to: DAVFRSVAVRSILLERRSHGSCT*VYFCNV Trigger: GACATTACAAAAGTAGACCAAAGTACAACTTCCATG...TGATCTTCTTTCAAGCAGTATTGATCGAACAGCAACGCTCCGAAAGACAGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CAA 90 bp | GTATGTTTGTCGAAGTCACTCTTTAGTTCGGTTAGCGTCTTCTTAACAGAGTTAAGCGTCGTCAGACTGTaGTTCAGTATATCCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VCLSKSLFSSVSVFLTELSVVRL*FSISCF Trigger: AAAACAGGATATACTGAACAACAGTCTGACGACGCT...TAACTCTGTTAAGAAGACGCTAACCGAACTAAAGAGTGACTTCGACAAACATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTTGTAGTAAGTCGGTAACCAATCTCCCAATGCGTAGTGTTAAATCATTTACTGTCTTCAGAACTTaGGCTCTGTCACCTTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: SLCSKSVTNLPMRSVKSFTVFRT*ALSPSK Trigger: CTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAGT...AAATGATTTAACACTACGCATTGGGAGATTGGTTACCGACTTACTACAAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CAA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCTTTGAAAATGGCAAATaGGGGTCATTTAGTGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRFENGK*GSFSEV Trigger: CACTTCACTAAATGACCCCAATTTGCCATTTTCAAA...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGTCACCTTTACTTTTGTAATGTCTaGAGAAAGCGTCGTCAGACT | + |
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Preference number: 3 (lower is better) Translates to: VLDHLQKSLSSELWLCHLYFCNV*RKRRQT Trigger: AGTCTGACGACGCTTTCTCAAGACATTACAAAAGTA...AAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR-3UTR CAA 90 bp | GTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGTCACCTTTTTACACTTGTAATCTaGAGACCAACATCTTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: VLDHLQKSLSSELWLCHLFTLVI*RPTSFA Trigger: GGCAAAAGATGTTGGTCTCAAGATTACAAGTGTAAA...AAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR TCA 90 bp | CAGATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACTGCTTGAAAGAAGATGGGAACCCTGGGCGGTaGCCGCGCCCCCTCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: QMLSFGALLFDQYCLKEDGNPGR*PRPLTD Trigger: GTCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCC...ATCTTCTTTCAAGCAGTATTGATCGAACAGCAACGCTCCGAAAGACAGCATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR CCA 90 bp | CAGATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACTGCTTGAAAGAAGATCGTTCGTGGGAACCCTaGGCGGTGACCGCGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QMLSFGALLFDQYCLKEDRSWEP*AVTAPP Trigger: AGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACG...ATCTTCTTTCAAGCAGTATTGATCGAACAGCAACGCTCCGAAAGACAGCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR GCA 90 bp | ACCTTTGGTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGGCACGTTCGGGGGTCTaGCCAGCCCCCGCCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: TFGFRSFAKVTVFRTLALARSGV*PAPASA Trigger: AGCGGAGGCGGGGGCTGGGCAGACCCCCGAACGTGC...CAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAACCAAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR CCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCAGGGGGAGCAGGACGTaGCCGCCTTGGCGTTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRRGSRT*PPWRSW Trigger: CCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCT...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTGAATTTTCAGATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACCCGCCTTGGCGTTCGTaGGAACCCTGGGCGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: FFVNFQMLSFGALLFDQYPPWRS*EPWAVT Trigger: GGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGG...GTATTGATCGAACAGCAACGCTCCGAAAGACAGCATCTGAAAATTCACAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR GCA 90 bp | CAAATAGAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGCACGTTCGGGGGTCTaGCCAGCCCCCGCCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: QIEFCQCTQIRDIQKSRSARSGV*PAPASA Trigger: AGCGGAGGCGGGGGCTGGGCAGACCCCCGAACGTGC...ACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTCTATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGGTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGAGGGGGAGCAGGACGTaGCCGCCTTGGCGTTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: TFGFRSFAKVTVFRTLALRGSRT*PPWRSW Trigger: CCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCT...CAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAACCAAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR CCA 90 bp | ATCTTGAGACCAACATCTTTTGCCATGGAAGTTGTACTTTGGTCTACTTTTGTAGCCCCCTCACAGACTTaGCACCGCCCAGAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ILRPTSFAMEVVLWSTFVAPSQT*HRPEPS Trigger: GCTGGGCTCTGGGCGGTGCCAAGTCTGTGAGGGGGC...TACAAAAGTAGACCAAAGTACAACTTCCATGGCAAAAGATGTTGGTCTCAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR CCA 90 bp | TGCACAGAATCTGTCAATGATATTACATCAGTTACTAAACCTGAAATCCGTCGTAGGACGTGGCCGCCTTaGCGTTCGTGGGAACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CTESVNDITSVTKPEIRRRTWPP*RSWEPW Trigger: CCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCT...ACGACGGATTTCAGGTTTAGTAACTGATGTAATATCATTGACAGATTCTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR GCA 90 bp | TTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACACAGTTCCACTCAGGCTGGAGTaGAGTGGCGCGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LSKPSRDHGSSKLMSNTVPLRLE*SGAISA Trigger: AGCCGAGATCGCGCCACTGCACTCCAGCCTGAGTGG...AACTGTGTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | GATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACTGCTTGAAAGAAGATCAACTGAGTCTTTCAGCTaGCAGCTCCATAGTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: DAVFRSVAVRSILLERRSTESFS*QLHSSP Trigger: AGGGGAACTATGGAGCTGGCAGCTGAAAGACTCAGT...TGATCTTCTTTCAAGCAGTATTGATCGAACAGCAACGCTCCGAAAGACAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR TCA 90 bp | CAAATAGAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGATCTCCTGACTTCGTaGTCTGCCCACCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QIEFCQCTQIRDIQKSRSDLLTS*SAHLGL Trigger: GAGGCCGAGGTGGGCAGATCACGAAGTCAGGAGATC...ACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTCTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | CTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATATAGCTTCAGATTTCTaGCACAGGCCAGGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSSELWLCHLLSLEIYLYIASDF*HRPGPG Trigger: GCCTGGGCCTGGCCTGTGGCAGAAATCTGAAGCTAT...ATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR TCA 90 bp | GTATGTTTGTCGAAGTCACTCTTTAGTTCGGTTAGCGTCTTCTTAACAGAGTTATCCTCGTTGCTTCACTaGGTCTTTCAGCTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VCLSKSLFSSVSVFLTELSSLLH*VFQLPA Trigger: AGCTGGCAGCTGAAAGACTCAGTGAAGCAACGAGGA...TAACTCTGTTAAGAAGACGCTAACCGAACTAAAGAGTGACTTCGACAAACATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR GCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTCCTGACTTCGTGATCTaGCCACCTCGGCCTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: EFCQCTQIRDIQKSRSVIPDFVI*PPRPPK Trigger: TTTGGGAGGCCGAGGTGGGCAGATCACGAAGTCAGG...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | TGCACAGAATCTGTCAATGATATTACATCAGTTACTAAACCTGAAATCCGTCGTCCCCGGCATCCTCGTTaGTTCACTGAGTCTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CTESVNDITSVTKPEIRRPRHPR*FTESFS Trigger: GCTGAAAGACTCAGTGAAGCAACGAGGATGCCGGGG...ACGACGGATTTCAGGTTTAGTAACTGATGTAATATCATTGACAGATTCTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR TCA 90 bp | CCTAACTCCAGTGGAGAAGGAGTTTGGGGGTTCTCCAAAAACTTGCAAATTTACGACAGTAAGTTCAGGTaGCAGAAAAGGTATGAGACA | + |
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Preference number: 4 (lower is better) Translates to: PNSSGEGVWGFSKNLQIYDSKFR*QKRYET Trigger: TGTCTCATACCTTTTCTGTCACCTGAACTTACTGTC...GTAAATTTGCAAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTGGAGTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | CCTAACTCCAGTGGAGAAGGAGTTTGGGGGTTCTCCAAAAACTTGCAAATTTACAGGTTGGATACTTCCTaGTCAAACTGGGTCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: PNSSGEGVWGFSKNLQIYRLDTS*SNWVIK Trigger: TTTGATGACCCAGTTTGAGCAGGAAGTATCCAACCT...GTAAATTTGCAAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTGGAGTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | TTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACACAGTTGTATCAGAGCCTAGCTaGTCCTCTACTCGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LSKPSRDHGSSKLMSNTVVSEPS*SSTRRR Trigger: TCTCCTGCGAGTAGAGGAGCAGCTAGGCTCTGATAC...AACTGTGTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR TCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCGTTTCTATCAGATCCTaGGAGACTCTGAGAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRVSIRS*ETLRTE Trigger: CTCTGTTCTCAGAGTCTCTCAGGATCTGATAGAAAC...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCGATGATGTAGCTTCCTaGAGGATGCTTTCAGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRDDVAS*RMLSVD Trigger: GTCTACTGAAAGCATCCTGCAGGAAGCTACATCATC...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTGTGAATTTTCAGATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACTGTCTTTCGGAGCGTTaGTGTTCGATCAATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: FFVNFQMLSFGALLFDQYCLSER*CSINTA Trigger: AGCAGTATTGATCGAACAGCAACGCTCCGAAAGACA...GTATTGATCGAACAGCAACGCTCCGAAAGACAGCATCTGAAAATTCACAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR TCA 90 bp | GCCTATTTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACCCAGGCTTATTTTCATaGTTCACGCTGTCTACCACA | + |
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Preference number: 4 (lower is better) Translates to: AYLSKPSRDHGSSKLMSNPGLFS*FTLSTT Trigger: TGTGGTAGACAGCGTGAATCATGAAAATAAGCCTGG...GTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAAATAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR CCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCACTTCCTGCTCAAACTaGGTCATCAAAGACATGGAT | + |
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Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRTSCSN*VIKDMD Trigger: ATCCATGTCTTTGATGACCCAGTTTGAGCAGGAAGT...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR CCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCTCATGCATGATATCTTaGAGGTTGGATACTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRSCMIS*RLDTSC Trigger: GCAGGAAGTATCCAACCTCCAAGATATCATGCATGA...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR CCA 90 bp | CTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATCTGTCTTCAGAACTTTaGCTCTGTCACCTTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSSELWLCHLLSLEIYLYLSSEL*LCHLLS Trigger: GCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG...ATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR TCA 90 bp | GCCTATTTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACAATTTTTCTGACTGCTaGAATACAAACCAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AYLSKPSRDHGSSKLMSNNFSDC*NTNQAR Trigger: CCTGGCCTGGTTTGTATTTCAGCAGTCAGAAAAATT...GTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAAATAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR TCA 90 bp | GTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGTCACCTTACTTTTGTAATGTCTTaGGAAAGCGTCGTCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: VLDHLQKSLSSELWLCHLTFVMS*ESVVRL Trigger: CAGTCTGACGACGCTTTCTCAAGACATTACAAAAGT...AAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR CAA 72 bp | TTCTTTGTGAATTTTCAGATGCTGTCTTTCGGAGCGTaGCTGTTCGATCAATACTGCTTGAAAGAAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: FFVNFQMLSFGA*LFDQYCLKEDH Trigger: GTGATCTTCTTTCAAGCAGTATTGATCGAACAGCAACGCTCCGAAAGACAGCATCTGAAAATTCACAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| 3UTR CAA 72 bp | CTGTCACCTTCTAAGCTTAGAAATCTATCTGTATGTTaGTCGAAGTCACTCTTTAGTTCGGTTAGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSKLRNLSVC*SKSLFSSVSVF Trigger: GAAGACGCTAACCGAACTAAAGAGTGACTTCGACAAACATACAGATAGATTTCTAAGCTTAGAAGGTGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR TCA 90 bp | CAAATAGAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTCATCAAAGACATGGATaGTGTAGCTTCCTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QIEFCQCTQIRDIQKSRSHQRHG*CSFLQD Trigger: ATCCTGCAGGAAGCTACATCATCCATGTCTTTGATG...ACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTCTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR TCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCTTTGAATGTCATGCATaGTATCTTGGAGGTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRFECHA*YLGGWI Trigger: TATCCAACCTCCAAGATATCATGCATGACATTCAAA...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR TCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCTTTGCATCCTTTGAGTaGGCACCTCTTCATTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRFASFE*APLHYF Trigger: AAAATAATGAAGAGGTGCTCACTCAAAGGATGCAAA...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR TCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTAGGCTTTGCATCCTTTaGGTGAGCACCTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EFCQCTQIRDIQKSRSVIRLCIL*VSTSSL Trigger: TAATGAAGAGGTGCTCACTCAAAGGATGCAAAGCCT...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR GCA 90 bp | AGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTGTTCGATCAATACTaGTTGAAAGAAGATCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSFAKVTVFRTLALSPSKLFDQY*LKEDHL Trigger: TAGGTGATCTTCTTTCAAGCAGTATTGATCGAACAG...CTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| 3UTR CAA 72 bp | CATGGAAGTTGTACTTTGGTCTACTTTTGTAATGTCTaGAGAAAGCGTCGTCAGACTGTTGTTCAGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: HGSCTLVYFCNV*RKRRQTVVQYI Trigger: GATATACTGAACAACAGTCTGACGACGCTTTCTCAAGACATTACAAAAGTAGACCAAAGTACAACTTCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR TCA 90 bp | GCCTATTTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACCTACCTTTTTGTAACTaGCTGCTTTCAAGTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AYLSKPSRDHGSSKLMSNLPFCN*LLSSSL Trigger: CAAAGAACTTGAAAGCAGTCAGTTACAAAAAGGTAG...GTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAAATAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CCA 90 bp | AATGCTATGCCCCTTAATAACAGAACTCTCCAGGCTTATTTTCATGATTCACGCTCTAGTTTCAGTAACTaGTATTGGTTTTCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAMPLNNRTLQAYFHDSRSSFSN*YWFSTF Trigger: AAAGGTGGAAAACCAATACCAGTTACTGAAACTAGA...GCGTGAATCATGAAAATAAGCCTGGAGAGTTCTGTTATTAAGGGGCATAGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CCA 90 bp | TTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACACAGTTCTCTTTATTAGCCCCTaGAGACATCAATATATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPSRDHGSSKLMSNTVLFISP*RHQYMW Trigger: CCACATATATTGATGTCTCCAGGGGCTAATAAAGAG...AACTGTGTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTTGCATTCTTCAACTTTaGGTTCGTAGTCGGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EFCQCTQIRDIQKSRSVICILQL*VRSRKV Trigger: AACTTTCCGACTACGAACCCAAAGTTGAAGAATGCA...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTGTAGTAAGTCGGTAACCAATCTCCCAATGCGTAGTGTTAAATCATTTCAACATCTTTTGCCATaGAAGTTGTACTTTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLCSKSVTNLPMRSVKSFQHLLP*KLYFGL Trigger: TAGACCAAAGTACAACTTCCATGGCAAAAGATGTTG...AAATGATTTAACACTACGCATTGGGAGATTGGTTACCGACTTACTACAAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR TCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTGTGACAGAAAAGGTATaGGACATAGGTTTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EFCQCTQIRDIQKSRSVIVTEKV*DIGLKM Trigger: CATTTTCAAACCTATGTCTCATACCTTTTCTGTCAC...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CCA 90 bp | ATGGATCTAGCAAACTCATGTCTAACACAGTTGGAACCTAAAACTCAGGTATATTTTAGTGGTGTGGTTTaGGAAATCTTTAAAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: MDLANSCLTQLEPKTQVYFSGVV*EIFKMT Trigger: CGTCATTTTAAAGATTTCCCAAACCACACCACTAAA...ATATACCTGAGTTTTAGGTTCCAACTGTGTTAGACATGAGTTTGCTAGATCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| 3UTR CAA 72 bp | GAGACCATGGATCTAGCAAACTCATGTCTAACACAGTaGGAACCTAAAACTCAGGTATATAAAGATATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETMDLANSCLTQ*EPKTQVYKDIS Trigger: TGAAATATCTTTATATACCTGAGTTTTAGGTTCCAACTGTGTTAGACATGAGTTTGCTAGATCCATGGTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| 3UTR CAA 72 bp | GAAATCCGTCGTATATCTGTTTTTACACTTGTAATCTaGAGACCAACATCTTTTGCCATGGAAGTTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: EIRRISVFTLVI*RPTSFAMEVVL Trigger: AAGTACAACTTCCATGGCAAAAGATGTTGGTCTCAAGATTACAAGTGTAAAAACAGATATACGACGGATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| 3UTR CAA 72 bp | TTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTaGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FRSFAKVTVFRT*ALSPSKLRNLS Trigger: AGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| 3UTR CAA 72 bp | CCTTCTTTAGATTATACACCTTTGGTTTTAGATCATTaGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLDYTPLVLDH*QKSLSSELWLC Trigger: ACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAACCAAAGGTGTATAATCTAAAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR GCA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTAGCAATTTTATTTCCTaGTCAGCTGAGTTAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFCQCTQIRDIQKSRSVISNFIS*SAELIW Trigger: CCAAATTAACTCAGCTGAGCAGGAAATAAAATTGCT...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS GCA 90 bp | GGCAGGACGAAGGGGTCGCGCGCGCCACGTCGGGCGCGCCGCCGCTaGCCGAGTCCGGCATTGGTGGGAACGCGGCGCGTCCCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRTKGSRAPRRARRR*PSPALVGTRRVPEA Trigger: AGCCTCAGGGACGCGCCGCGTTCCCACCAATGCCGGACTCGGGCAGCGGCGGCGCGCCCGACGTGGCGCGCGCGACCCCTTCGTCCTGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342502.6 |
||
| CDS TCA 90 bp | GGAGCAGGACGTGGCCGCCTTGGCGTTCGTGGGAACCCTGGGCGGTaGCCGCGCCCCCTCACAGACTTGGCACCGCCCAGAGCCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGRGRLGVRGNPGR*PRPLTDLAPPRAQP Trigger: GGGCTGGGCTCTGGGCGGTGCCAAGTCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
||
| CDS CCA 90 bp | ACCAGGGGGAGCAGGACGTGGCCGCCTTGGCGTTCGTGGGAACCCTaGGCGGTGACCGCGCCCCCTCACAGACTTGGCACCGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRGSRTWPPWRSWEP*AVTAPPHRLGTAQS Trigger: GCTCTGGGCGGTGCCAAGTCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
||
| CDS CCA 90 bp | GCCCAGGGCAGCTTCTTCACCAGGGGGAGCAGGACGTGGCCGCCTTaGCGTTCGTGGGAACCCTGGGCGGTGACCGCGCCCCCTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQGSFFTRGSRTWPP*RSWEPWAVTAPPHR Trigger: TCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCTGCCCTGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
||
| CDS CCA 90 bp | GGACGACAAGCCCAGGGCAGCTTCTTCACCAGGGGGAGCAGGACGTaGCCGCCTTGGCGTTCGTGGGAACCCTGGGCGGTGACCGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRQAQGSFFTRGSRT*PPWRSWEPWAVTAP Trigger: GGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCTGCCCTGGGCTTGTCGTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
||
| CDS CCA 90 bp | AGCTTCTTCACCAGGGGGAGCAGGACGTGGCCGCCTTGGCGTTCGTaGGAACCCTGGGCGGTGACCGCGCCCCCTCACAGACTTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SFFTRGSRTWPPWRS*EPWAVTAPPHRLGT Trigger: GGTGCCAAGTCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
||
| CDS GCA 90 bp | GAGGTGGGCGGCGACCTCAACCCACAGCGCCTTCCACTGCGATATTaGTCCAAATCCGAGGAAATTCAAACTCCCGGGCGCGCGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVGGDLNPQRLPLRY*SKSEEIQTPGRAQA Trigger: GGCCTGCGCGCGCCCGGGAGTTTGAATTTCCTCGGATTTGGAGCAATATCGCAGTGGAAGGCGCTGTGGGTTGAGGTCGCCGCCCACCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342502.6 |
||
| CDS GCA 90 bp | CTTCCCTCTCCCCGGCATCCTCGTTGCTTCACTGAGTCTTTCAGCTaGCAGCTCCATAGTTCCCCTAGGAGAGGTGGGCGGCGACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPSPRHPRCFTESFS*QLHSSPRRGGRRPQ Trigger: TTGAGGTCGCCGCCCACCTCTCCTAGGGGAACTATGGAGCTGGCAGCTGAAAGACTCAGTGAAGCAACGAGGATGCCGGGGAGAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGTGAATTTTCAGATGCTGTCTTTCGGAGCGTTGCTGTTCGATCAATACCGCCCCCTCACAGACTaGGCACCGCCCAGAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFVNFQMLSFGALLFDQYRPLTD*APPRAQ Trigger: CTGGGCTCTGGGCGGTGCCAAGTCTGTGAGGGGGCG...GTATTGATCGAACAGCAACGCTCCGAAAGACAGCATCTGAAAATTCACAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTAGATCATTTGCAAAAGTCACTGTCTTCAGAACTTTGGCTCTGTCACCTTGCAGCAGGGGCTCCCTaGGGCCCCGACTTCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLDHLQKSLSSELWLCHLAAGAP*GPDFFR Trigger: CCGGAAGAAGTCGGGGCCCAAGGGAGCCCCTGCTGC...AAGGTGACAGAGCCAAAGTTCTGAAGACAGTGACTTTTGCAAATGATCTAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | GTATGTTTGTCGAAGTCACTCTTTAGTTCGGTTAGCGTCTTCTTAACAGAGTTACAGGACGTGGCCGCCTaGGCGTTCGTGGGAACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLSKSLFSSVSVFLTELQDVAA*AFVGTL Trigger: CAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTG...TAACTCTGTTAAGAAGACGCTAACCGAACTAAAGAGTGACTTCGACAAACATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | GAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTGTAATTGCAGCAGGGGCTCCCTaGGGCCCCGACTTCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EFCQCTQIRDIQKSRSVIAAGAP*GPDFFR Trigger: CCGGAAGAAGTCGGGGCCCAAGGGAGCCCCTGCTGC...AATTACACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS TCA 90 bp | GAGGTTGGATACTTCCTGCTCAAACTGGGTCATCAAAGACATGGATaGTGTAGCTTCCTGCAGGATGCTTTCAGTAGACTCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVGYFLLKLGHQRHG*CSFLQDAFSRLKLF Trigger: GAAAAGCTTGAGTCTACTGAAAGCATCCTGCAGGAAGCTACATCATCCATGTCTTTGATGACCCAGTTTGAGCAGGAAGTATCCAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS CCA 90 bp | ATGTCATGCATGATATCTTGGAGGTTGGATACTTCCTGCTCAAACTaGGTCATCAAAGACATGGATGATGTAGCTTCCTGCAGGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MSCMISWRLDTSCSN*VIKDMDDVASCRML Trigger: AAGCATCCTGCAGGAAGCTACATCATCCATGTCTTTGATGACCCAGTTTGAGCAGGAAGTATCCAACCTCCAAGATATCATGCATGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | CCTAACTCCAGTGGAGAAGGAGTTTGGGGGTTCTCCAAAAACTTGCAAATTTACATGATATCTTGGAGGTaGGATACTTCCTGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PNSSGEGVWGFSKNLQIYMISWR*DTSCSN Trigger: GTTTGAGCAGGAAGTATCCAACCTCCAAGATATCAT...GTAAATTTGCAAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTGGAGTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS GCA 90 bp | TCCTGCTCAAACTGGGTCATCAAAGACATGGATGATGTAGCTTCCTaGAGGATGCTTTCAGTAGACTCAAGCTTTTCTGAAATTAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSNWVIKDMDDVAS*RMLSVDSSFSEIKL Trigger: CAGTTTAATTTCAGAAAAGCTTGAGTCTACTGAAAGCATCCTGCAGGAAGCTACATCATCCATGTCTTTGATGACCCAGTTTGAGCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS CCA 90 bp | ATCCTGAGAGACTCTGAGAACAGAGTGAATAGCACTTTCAATTGTTaGCAAATGTGTCTTGCATTCTTCAACTTTGGGTTCGTAGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILRDSENRVNSTFNC*QMCLAFFNFGFVVG Trigger: TCCGACTACGAACCCAAAGTTGAAGAATGCAAGACACATTTGCCAACAATTGAAAGTGCTATTCACTCTGTTCTCAGAGTCTCTCAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | ATCTTGAGACCAACATCTTTTGCCATGGAAGTTGTACTTTGGTCTACTTTTGTACTGTCTTTCGGAGCGTaGCTGTTCGATCAATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILRPTSFAMEVVLWSTFVLSFGA*LFDQYC Trigger: GCAGTATTGATCGAACAGCAACGCTCCGAAAGACAG...TACAAAAGTAGACCAAAGTACAACTTCCATGGCAAAAGATGTTGGTCTCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS GCA 90 bp | TGTTCCTCTTCTAACTTTTCAATTGCCTTTGTATCAGAGCCTAGCTaGTCCTCTACTCGCAGGAGATCTTCTTCTTCTTGTCTTTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: CSSSNFSIAFVSEPS*SSTRRRSSSSCLFT Trigger: AGTAAAAAGACAAGAAGAAGAAGATCTCCTGCGAGTAGAGGAGCAGCTAGGCTCTGATACAAAGGCAATTGAAAAGTTAGAAGAGGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | CCTAACTCCAGTGGAGAAGGAGTTTGGGGGTTCTCCAAAAACTTGCAAATTTACCTTCTAACTTTTCAATaGCCTTTGTATCAGAGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PNSSGEGVWGFSKNLQIYLLTFQ*PLYQSL Trigger: TAGGCTCTGATACAAAGGCAATTGAAAAGTTAGAAG...GTAAATTTGCAAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTGGAGTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATACTGTCTTCAGAACTTaGGCTCTGTCACCTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSELWLCHLLSLEIYLYTVFRT*ALSPSK Trigger: CTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAGT...ATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | ATGGATCTAGCAAACTCATGTCTAACACAGTTGGAACCTAAAACTCAGGTATATGTCATGCATGATATCTaGGAGGTTGGATACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MDLANSCLTQLEPKTQVYVMHDI*EVGYFL Trigger: CAGGAAGTATCCAACCTCCAAGATATCATGCATGAC...ATATACCTGAGTTTTAGGTTCCAACTGTGTTAGACATGAGTTTGCTAGATCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | CAAATAGAATTTTGTCAGTGCACGCAAATAAGAGACATTCAGAAGTCAAGAAGTCAGTGGAGAAGGAGTTaGGGGGTTCTCCAAAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: QIEFCQCTQIRDIQKSRSQWRRS*GVLQKL Trigger: AAGTTTTTGGAGAACCCCCAAACTCCTTCTCCACTG...ACTTCTTGACTTCTGAATGTCTCTTATTTGCGTGCACTGACAAAATTCTATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATAGCGTCGTCAGACTGTaGTTCAGTATATCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSELWLCHLLSLEIYLYSVVRL*FSISCF Trigger: AAAACAGGATATACTGAACAACAGTCTGACGACGCT...ATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | ATGGATCTAGCAAACTCATGTCTAACACAGTTGGAACCTAAAACTCAGGTATATACTTTTCAATTGCCTTaGTATCAGAGCCTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MDLANSCLTQLEPKTQVYTFQLP*YQSLAA Trigger: AGCAGCTAGGCTCTGATACAAAGGCAATTGAAAAGT...ATATACCTGAGTTTTAGGTTCCAACTGTGTTAGACATGAGTTTGCTAGATCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCAGAACTTTGGCTCTGTCACCTTCTAAGCTTAGAAATCTATCTGTATTACTTTTGTAATGTCTaGAGAAAGCGTCGTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSELWLCHLLSLEIYLYYFCNV*RKRRQT Trigger: AGTCTGACGACGCTTTCTCAAGACATTACAAAAGTA...ATACAGATAGATTTCTAAGCTTAGAAGGTGACAGAGCCAAAGTTCTGAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
||
| CDS-3UTR CAA 90 bp | TTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACACAGTTTCATGTCTAACACAGTaGGAACCTAAAACTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSKPSRDHGSSKLMSNTVSCLTQ*EPKTQV Trigger: TACCTGAGTTTTAGGTTCCAACTGTGTTAGACATGA...AACTGTGTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTTTGTAGTAAGTCGGTAACCAATCTCCCAATGCGTAGTGTTAAATCACATGGAAGTTGTACTTaGGTCTACTTTTGTAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLCSKSVTNLPMRSVKSHGSCT*VYFCNV Trigger: GACATTACAAAAGTAGACCAAAGTACAACTTCCATG...TGATTTAACACTACGCATTGGGAGATTGGTTACCGACTTACTACAAAGAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTTTGTAGTAAGTCGGTAACCAATCTCCCAATGCGTAGTGTTAAATCATTTACACTTGTAATCTaGAGACCAACATCTTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: FSLCSKSVTNLPMRSVKSFTLVI*RPTSFA Trigger: GGCAAAAGATGTTGGTCTCAAGATTACAAGTGTAAA...TGATTTAACACTACGCATTGGGAGATTGGTTACCGACTTACTACAAAGAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393042.3 |
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| CDS-3UTR CAA 90 bp | ATGGATCTAGCAAACTCATGTCTAACACAGTTGGAACCTAAAACTCAGGTATATATTGGTTTTCCACCTTaGCAAATTTTTCTGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: MDLANSCLTQLEPKTQVYIGFPP*QIFLTA Trigger: AGCAGTCAGAAAAATTTGCAAAGGTGGAAAACCAAT...ATATACCTGAGTTTTAGGTTCCAACTGTGTTAGACATGAGTTTGCTAGATCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS-3UTR CAA 90 bp | TTAAGTAAACCATCTAGAGACCATGGATCTAGCAAACTCATGTCTAACACAGTTTTTGAAAATGGCAAATaGGGGTCATTTAGTGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LSKPSRDHGSSKLMSNTVFENGK*GSFSEV Trigger: CACTTCACTAAATGACCCCAATTTGCCATTTTCAAA...AACTGTGTTAGACATGAGTTTGCTAGATCCATGGTCTCTAGATGGTTTACTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS GCA 72 bp | AAGGGGTCGCGCGCGCCACGTCGGGCGCGCCGCCGCTaGCCGAGTCCGGCATTGGTGGGAACGCGGCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: KGSRAPRRARRR*PSPALVGTRRV Trigger: GACGCGCCGCGTTCCCACCAATGCCGGACTCGGGCAGCGGCGGCGCGCCCGACGTGGCGCGCGCGACCCCTT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342502.6 |
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| CDS TCA 72 bp | CGTGGCCGCCTTGGCGTTCGTGGGAACCCTGGGCGGTaGCCGCGCCCCCTCACAGACTTGGCACCGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RGRLGVRGNPGR*PRPLTDLAPPR Trigger: TCTGGGCGGTGCCAAGTCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CCA 72 bp | ACCAGGGGGAGCAGGACGTGGCCGCCTTGGCGTTCGTaGGAACCCTGGGCGGTGACCGCGCCCCCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: TRGSRTWPPWRS*EPWAVTAPPHR Trigger: TCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CAA 90 bp | AGCCCAGGGCAGCTTCTTCACCAGGGGGAGCAGGACGTGGCCGCCTaGGCGTTCGTGGGAACCCTGGGCGGTGACCGCGCCCCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SPGQLLHQGEQDVAA*AFVGTLGGDRAPSQ Trigger: CTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCTGCCCTGGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CCA 72 bp | AGCAGGACGTGGCCGCCTTGGCGTTCGTGGGAACCCTaGGCGGTGACCGCGCCCCCTCACAGACTTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SRTWPPWRSWEP*AVTAPPHRLGT Trigger: GGTGCCAAGTCTGTGAGGGGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CCA 72 bp | AGCTTCTTCACCAGGGGGAGCAGGACGTGGCCGCCTTaGCGTTCGTGGGAACCCTGGGCGGTGACCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFFTRGSRTWPP*RSWEPWAVTAP Trigger: GGGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CCA 72 bp | GCCCAGGGCAGCTTCTTCACCAGGGGGAGCAGGACGTaGCCGCCTTGGCGTTCGTGGGAACCCTGGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: AQGSFFTRGSRT*PPWRSWEPWAV Trigger: CACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCTGCCCTGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CAA 72 bp | CAGCTTCTTCACCAGGGGGAGCAGGACGTGGCCGCCTaGGCGTTCGTGGGAACCCTGGGCGGTGACCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: QLLHQGEQDVAA*AFVGTLGGDRA Trigger: GGCGCGGTCACCGCCCAGGGTTCCCACGAACGCCAAGGCGGCCACGTCCTGCTCCCCCTGGTGAAGAAGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS CAA 90 bp | AGAGGTGGGCGGCGACCTCAACCCACAGCGCCTTCCACTGCGATATaGCTCCAAATCCGAGGAAATTCAAACTCCCGGGCGCGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RGGRRPQPTAPSTAI*LQIRGNSNSRARAG Trigger: GCCTGCGCGCGCCCGGGAGTTTGAATTTCCTCGGATTTGGAGCAATATCGCAGTGGAAGGCGCTGTGGGTTGAGGTCGCCGCCCACCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342502.6 |
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| CDS GCA 72 bp | CCCCGGCATCCTCGTTGCTTCACTGAGTCTTTCAGCTaGCAGCTCCATAGTTCCCCTAGGAGAGGTGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PRHPRCFTESFS*QLHSSPRRGGR Trigger: CCGCCCACCTCTCCTAGGGGAACTATGGAGCTGGCAGCTGAAAGACTCAGTGAAGCAACGAGGATGCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342502.6 ENST00000393042.3 |
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| CDS GCA 72 bp | GGCGACCTCAACCCACAGCGCCTTCCACTGCGATATTaGTCCAAATCCGAGGAAATTCAAACTCCCGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GDLNPQRLPLRY*SKSEEIQTPGR Trigger: GCGCCCGGGAGTTTGAATTTCCTCGGATTTGGAGCAATATCGCAGTGGAAGGCGCTGTGGGTTGAGGTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342502.6 |
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| CDS CAA 72 bp | CGGCGACCTCAACCCACAGCGCCTTCCACTGCGATATaGCTCCAAATCCGAGGAAATTCAAACTCCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RRPQPTAPSTAI*LQIRGNSNSRA Trigger: CGCCCGGGAGTTTGAATTTCCTCGGATTTGGAGCAATATCGCAGTGGAAGGCGCTGTGGGTTGAGGTCGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342502.6 |
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| CDS GCA 72 bp | AGGTGGGCGGCGACCTCAACCCACAGCGCCTTCCACTaGGATATTGCTCCAAATCCGAGGAAATTCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: RWAATSTHSAFH*DIAPNPRKFKL Trigger: GAGTTTGAATTTCCTCGGATTTGGAGCAATATCGCAGTGGAAGGCGCTGTGGGTTGAGGTCGCCGCCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342502.6 |
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| CDS CAA 90 bp | CATCTCTGGCAAAGAGGGCATGCTGTTCCTCTTCTAACTTTTCAATaGCCTTTGTATCAGAGCCTAGCTGCTCCTCTACTCGCAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: HLWQRGHAVPLLTFQ*PLYQSLAAPLLAGD Trigger: ATCTCCTGCGAGTAGAGGAGCAGCTAGGCTCTGATACAAAGGCAATTGAAAAGTTAGAAGAGGAACAGCATGCCCTCTTTGCCAGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS CAA 90 bp | TGGCAAAGAGGGCATGCTGTTCCTCTTCTAACTTTTCAATTGCCTTaGTATCAGAGCCTAGCTGCTCCTCTACTCGCAGGAGATCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: WQRGHAVPLLTFQLP*YQSLAAPLLAGDLL Trigger: AAGAAGATCTCCTGCGAGTAGAGGAGCAGCTAGGCTCTGATACAAAGGCAATTGAAAAGTTAGAAGAGGAACAGCATGCCCTCTTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS TCA 72 bp | TACTTCCTGCTCAAACTGGGTCATCAAAGACATGGATaGTGTAGCTTCCTGCAGGATGCTTTCAGTAGACTC | + |
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Preference number: 6 (lower is better) Translates to: YFLLKLGHQRHG*CSFLQDAFSRL Trigger: GAGTCTACTGAAAGCATCCTGCAGGAAGCTACATCATCCATGTCTTTGATGACCCAGTTTGAGCAGGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS CCA 72 bp | ATGATATCTTGGAGGTTGGATACTTCCTGCTCAAACTaGGTCATCAAAGACATGGATGATGTAGCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: MISWRLDTSCSN*VIKDMDDVASC Trigger: GCAGGAAGCTACATCATCCATGTCTTTGATGACCCAGTTTGAGCAGGAAGTATCCAACCTCCAAGATATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS GCA 72 bp | TCTAACTTTTCAATTGCCTTTGTATCAGAGCCTAGCTaGTCCTCTACTCGCAGGAGATCTTCTTCTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SNFSIAFVSEPS*SSTRRRSSSSC Trigger: ACAAGAAGAAGAAGATCTCCTGCGAGTAGAGGAGCAGCTAGGCTCTGATACAAAGGCAATTGAAAAGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS CAA 90 bp | ATTCATTGGTTTCTAGTTTCAGTAACTGGTATTGGTTTTCCACCTTaGCAAATTTTTCTGACTGCTGAAATACAAACCAGGCCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: IHWFLVSVTGIGFPP*QIFLTAEIQTRPGP Trigger: TGGGCCTGGCCTGGTTTGTATTTCAGCAGTCAGAAAAATTTGCAAAGGTGGAAAACCAATACCAGTTACTGAAACTAGAAACCAATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299157.5 ENST00000342502.6 |
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| CDS CAA 90 bp | TTGAGTGAGCACCTCTTCATTATTTTGAATGTCATGCATGATATCTaGGAGGTTGGATACTTCCTGCTCAAACTGGGTCATCAAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: LSEHLFIILNVMHDI*EVGYFLLKLGHQRH Trigger: ATGTCTTTGATGACCCAGTTTGAGCAGGAAGTATCCAACCTCCAAGATATCATGCATGACATTCAAAATAATGAAGAGGTGCTCACTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS CAA 72 bp | CACCTCTTCATTATTTTGAATGTCATGCATGATATCTaGGAGGTTGGATACTTCCTGCTCAAACTGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HLFIILNVMHDI*EVGYFLLKLGH Trigger: ATGACCCAGTTTGAGCAGGAAGTATCCAACCTCCAAGATATCATGCATGACATTCAAAATAATGAAGAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS CAA 90 bp | TCTCTTCCAGAAATCCGTAATATTCTGAAATTTCTCATTAAGGCTTaGCATCCTTTGAGTGAGCACCTCTTCATTATTTTGAATGTCATG | + |
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Preference number: 6 (lower is better) Translates to: SLPEIRNILKFLIKA*HPLSEHLFIILNVM Trigger: CATGACATTCAAAATAATGAAGAGGTGCTCACTCAAAGGATGCAAAGCCTTAATGAGAAATTTCAGAATATTACGGATTTCTGGAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299157.5 |
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| CDS CCA 72 bp | AGTTGTTGGAATTCATTGGTTTCTAGTTTCAGTAACTaGTATTGGTTTTCCACCTTTGCAAATTTTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SCWNSLVSSFSN*YWFSTFANFSD Trigger: GTCAGAAAAATTTGCAAAGGTGGAAAACCAATACCAGTTACTGAAACTAGAAACCAATGAATTCCAACAACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299157.5 ENST00000342502.6 |
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